From e2a3ead642713a4f039f57e556c28651c3420828 Mon Sep 17 00:00:00 2001 From: Miguel Covarrubias Date: Fri, 28 Oct 2022 15:52:05 -0400 Subject: [PATCH] Fix Dockerfile nits that break 20.10.21 --- scripts/variantstore/wdl/extract/Dockerfile | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/scripts/variantstore/wdl/extract/Dockerfile b/scripts/variantstore/wdl/extract/Dockerfile index 9ffbe2f16be..b8fbd7f957d 100644 --- a/scripts/variantstore/wdl/extract/Dockerfile +++ b/scripts/variantstore/wdl/extract/Dockerfile @@ -110,10 +110,11 @@ COPY --from=build /bcftools /bcftools # Copy the application source code. RUN mkdir /app -COPY *.py /app -COPY *.sql /app +COPY *.py /app/ +COPY *.sql /app/ # Copy the schema files needed for VAT creation. +RUN mkdir -p /data/variant_annotation_table/schema COPY ./variant_annotation_table/schema/*.json /data/variant_annotation_table/schema/ ENV PATH=/bcftools/bin\:$PATH