- modified java files to remove unused properties and changes to tests
- db changes, mutationmapper.xml
- Update seed_mini.sql

roll back changes for refseqMrnaId

roll back changes for refseqMrnaId

Update ExtendedMutation.java

Added required property setOncotatorRefseqMrnaId and getOncotatorRefseqMrnaId

Updated more files for removed fields

Remove unused oncotator fields

Remove unused oncotator fields
ONCOTATOR_DBSNP_RS
ONCOTATOR_UNIPROT_ENTRY_NAME

remove fields from sql file

ONCOTATOR_DBSNP_RS and ONCOTATOR_UNIPROT_ENTRY_NAME removal from sql file

db changes in sql for renaming columns
renamed the column prefixes from oncotator to mutation on multiple classes and files

Update testSql.sql

updating testSql for the name change of columns from ONCOTATOR to MUTATION

Update DaoMutation.java

The data files still use the old column prefix of ONCOTATOR instead of MUTATION

Update DaoMutation.java

Update migration.sql

Adding quotes around column names

db changes in sql for renaming columns
renamed the column prefixes from oncotator to mutation on multiple classes and files

Update migration.sql

fix syntax errors in mysql change column

Update migration.sql

fix syntax errors in mysql change column

setting db version

setting db version

Removed Link columns and modified the documentation

…nt-final

Fix 9461 mutations api endpoint final

Merge master into v5.3.0

We need to update this test because it's not java 8 compatible.