Code

Visualizations post ChiRho#469

Code

Merged

SamWitty merged 59 commits intomainciemss/pyciemss:mainfrom jc-VisualizationTestsMergedciemss/pyciemss:jc-VisualizationTestsMergedCopy head branch name to clipboardFeb 7, 2024

+4,173-5

Commits

Commits on Jan 24, 2024

• Removing things from old locations.

  JosephCottam

  committed
  7ddcef0

• Moving visual components to new structure

  JosephCottam

  committed
  84a0620

• Moving tests and implementing in pytest (first draft)

  JosephCottam

  committed
  6caf315

Commits on Jan 25, 2024

• Parameterizing histogram test.

  JosephCottam

  committed
  36256bf

• Parameterizing schema-based tests.

  JosephCottam

  committed
  c3577f0

Commits on Jan 26, 2024

• Extending results processing to label output timepoints (optionally). Visualization tests depend on new version.

  JosephCottam

  committed
  95ca872

Commits on Jan 27, 2024

• check images and svg trouble-shooting

  marjoleinpnnl

  committed
  ba6bbce

Commits on Jan 29, 2024

• trying to set seed on random data gen

  marjoleinpnnl

  committed
  ba8d24f

• need to install additional files

  marjoleinpnnl

  committed
  54490dc

• add packages to install requires

  marjoleinpnnl

  committed
  4623547

• correct modified schema saving location

  marjoleinpnnl

  committed
  ab17cc7

• more informative error

  marjoleinpnnl

  committed
  ae0cfb2

• more informative error messages

  marjoleinpnnl

  committed
  bbb48d8

• remove difflib

  marjoleinpnnl

  committed
  38437b3

• try new png test

  marjoleinpnnl

  committed
  3c884f5

• remove spring graph

  marjoleinpnnl

  committed
  0f84384

• tried recreating the environment

  marjoleinpnnl

  committed
  6010e5a

• test with just 100 dim for all images svg

  marjoleinpnnl

  committed
  0b4b6e0

• reference to false

  marjoleinpnnl

  committed
  7d4fc75

• Only appending param/state/observable tag if not already present

  JosephCottam

  committed
  117f9d8

• Trajectories test running from simulation (not stored data).

  JosephCottam

  committed
  b73fb82

• Removing example trajectory files.

  JosephCottam

  committed
  4f00591

• add reference images created in docker

  marjoleinpnnl

  committed
  3325dde

• don't create reference files

  marjoleinpnnl

  committed
  ce66c88

• Removing dependency on stored data-cube.

  Show description for 4a8b8c8
  JosephCottam

  committed
  4a8b8c8

• gray scale

  marjoleinpnnl

  committed
  c253dfd

Commits on Jan 30, 2024

• jenson shannon threshold for png comparision

  marjoleinpnnl

  committed
  17c9b59

• add doc strings

  marjoleinpnnl

  committed
  2219823

• test mismach with test_plots, add white background when testing grayscale

  marjoleinpnnl

  committed
  fdc5ee9

• add JS score to message

  marjoleinpnnl

  committed
  ea655bc

• fix typo

  marjoleinpnnl

  committed
  eb69bc2

• test with 100 bins

  marjoleinpnnl

  committed
  2920fe7

• threshold 0.02 for shannonjansen

  marjoleinpnnl

  committed
  281817b

Commits on Jan 31, 2024

• add map heatmap isocontour

  marjoleinpnnl

  committed
  31ee360

Commits on Feb 1, 2024

• add data

  marjoleinpnnl

  committed
  f33f45a

Commits on Feb 2, 2024

• xmldiff-based check for approximate SVG output changes

  JosephCottam

  committed
  e2ebe8c

• Merge remote-tracking branch 'origin/myo_troubleshoot_check_svg_png' into jc-VisualizationTesting

  JosephCottam

  committed
  52ead4b

• Cleaning up reference image. Refining SVG and PNG comparisons.

  JosephCottam

  committed
  19fffc0

• Reverting to append '_state' after observables (but won't do '_state_state' anymore)

  JosephCottam

  committed
  db0f327

• Removing debug helper notebook.

  JosephCottam

  committed
  ca7830c

• Removing geomap+heatmap schema not ready for use (yet)

  JosephCottam

  committed
  c90ec68

• Fixing list-type (for 3.8 compatibility)

  JosephCottam

  committed
  c10ea6c

• Enforcing sort-order for better result color-mapping stability

  JosephCottam

  committed
  28bcd75

• Addressing mypy linting errors.

  JosephCottam

  committed
  8d74e99

• More mypy fixes

  JosephCottam

  committed
  52a69f9

Commits on Feb 3, 2024

• Fixing import and type complaint.

  JosephCottam

  committed
  c1a43fa

Commits on Feb 5, 2024

• Type checking passes for histogram.

  JosephCottam

  committed
  8089908

• Fixing error around where multi-line titles would somtimes break the schema.

  JosephCottam

  committed
  f4dc7ec

• Adding 'visual_options' back into the interface outputs.

  JosephCottam

  committed
  39d24c5

• Fixing dict-type for 3.8

  JosephCottam

  committed
  fb36199

Commits on Feb 6, 2024

• Fixing import orders

  JosephCottam

  committed
  3d6ea6e

• Reference image generating utility.

  JosephCottam

  committed
  f63aacb

• Improving stability of trajectories schema by sorting input values.

  Show description for 7813300
  JosephCottam

  committed
  7813300

• Import order fixes (two related to out-dated line-wrapping rules).

  JosephCottam

  committed
  6d83fd6

• Fixing formatting to black-defaults (as opposed to old VSCode black defaults)

  JosephCottam

  committed
  6324933

• Changing trajectories example to use output of newer vl-convert-python.

  JosephCottam

  committed
  6f2ec00

• flake8 compliance

  JosephCottam

  committed
  d7c52e1

Commits on Feb 7, 2024

• Fixing typo of output option and makign cases consistent

  JosephCottam

  committed
  872b850

• Ignoring a test-related output directory

  JosephCottam

  committed
  e360eb0