From 0674de34d9510ee44ff848b41d360581690398b7 Mon Sep 17 00:00:00 2001 From: Cornelius Roemer Date: Thu, 16 May 2024 13:42:46 +0200 Subject: [PATCH] Designate BA.2.86.6 (C9226T) --- lineage_notes.txt | 1 + lineages.csv | 224 +++++++++++++++++++++++++++++++++++++++++++++- 2 files changed, 221 insertions(+), 4 deletions(-) diff --git a/lineage_notes.txt b/lineage_notes.txt index 1c9e887c..1f72e755 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -1239,6 +1239,7 @@ JQ.2 Alias of B.1.1.529.2.86.3.2, S:R346T, G2944A, South Africa, from #2505 JQ.2.1 Alias of B.1.1.529.2.86.3.2.1, S:L455S, South Africa, from sars-cov-2-variants/lineage-proposals#1373 BA.2.86.4 Alias of B.1.1.529.2.86.4, S:A222V, ORF1a:V3892A, from sars-cov-2-variants/lineage-proposals#1032 BA.2.86.5 Alias of B.1.1.529.2.86.5, S:I197V, C5575T, T6085C, T23278C +BA.2.86.6 Alias of B.1.1.529.2.86.6, C9226T BA.2.87 Alias of B.1.1.529.2.87, C18744T, no C9866T BA.2.87.1 Alias of B.1.1.529.2.87.1, saltation with 15+ spike AA mutations, South Africa, from #2484 BA.3 Alias of B.1.1.529.3, from #367 diff --git a/lineages.csv b/lineages.csv index 3b786c78..01f46fa2 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2466906,10 +2466906,6 @@ SouthAfrica/NICD-R09629/2023,BA.2.86 Netherlands/NB-RIVM-131435/2023,BA.2.86 SouthAfrica/NICD-N55999/2023,BA.2.86 SouthAfrica/AHRI-N55999-1/2023,BA.2.86 -SouthAfrica/CERI-KRISP-K058327/2023,BA.2.86 -Switzerland/BS-UHB-USB_2023_09_10_161c9a51/2023,BA.2.86 -Germany/NI-RKI-I-1138285/2023,BA.2.86 -Germany/NI-RKI-I-1138310/2023,BA.2.86 SouthAfrica/NICD-N56070/2023,BA.2.86 SouthAfrica/NICD-N56072/2023,BA.2.86 SouthAfrica/NICD-N56089/2023,BA.2.86 @@ -2546969,3 +2546965,223 @@ USA/PA-CDC-LC1088276/2024,JN.11.1 USA/CA-Stanford-173_S42/2023,JN.11.1 USA/NY-PRL-240130_82D07/2024,JN.11.1 USA/NY-PRL-240130_82C09/2024,JN.11.1 +SouthAfrica/NICD-N57652/2023,BA.2.86.6 +SouthAfrica/NICD-N57458/2023,BA.2.86.6 +SouthAfrica/NICD-N57526/2023,BA.2.86.6 +SouthAfrica/NICD-N57509/2023,BA.2.86.6 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