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internal/core/adt: use Vertex.Indirect in more places
This prepares for several things, including the implementation of disjunctions and structure sharing. Issue #2851 Issue #2884 Issue #2854 Signed-off-by: Marcel van Lohuizen <mpvl@gmail.com> Change-Id: I831d5419e6b035667aae6f254f45456b34dfd93c
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