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16 followers · 20 following
  • University of Helsinki
  • Finland
  • 23:03 (UTC +02:00)

Achievements

Achievement: StarstruckAchievement: Pull Sharkx2

Achievements

Achievement: StarstruckAchievement: Pull Sharkx2

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  1. Denopia/kaarme Denopia/kaarme Public

    Hash table for storing long canonical k-mers. Used for a k-mer counter.

    C++

  2. grlBWT grlBWT Public

    Efficient construction of the BWT using string compression

    C++ 17

  3. LMS-based-self-index LMS-based-self-index Public

    A grammar-based self-index that relies on locally-consistent parsing.

    C++ 1

  4. grid grid Public

    Implementation of the data structure of Makinen and Navarro 2007 for encoding grids.

    C++

  5. lcg lcg Public

    Efficient, parallel compression for terabyte-scale data

    C++