[ 0s] Using BUILD_ROOT=/var/cache/obs/worker/root_5/.mount [ 0s] Using BUILD_ARCH=i586:i486:i386 [ 0s] Doing kvm build in /var/cache/obs/worker/root_5/root [ 0s] [ 0s] [ 0s] lamb15 started "build python3-espressomd.spec" at Fri Nov 15 17:00:29 UTC 2019. [ 0s] [ 0s] Building python3-espressomd for project 'home:cjunghans:branches:devel:languages:python:numeric' repository 'openSUSE_Tumbleweed' arch 'i586' srcmd5 '70adfc9456811c56fa860632187eaf56' [ 0s] [ 0s] processing recipe /var/cache/obs/worker/root_5/.build-srcdir/python3-espressomd.spec ... [ 0s] running changelog2spec --target rpm --file /var/cache/obs/worker/root_5/.build-srcdir/python3-espressomd.spec [ 0s] init_buildsystem --configdir /var/run/obs/worker/5/build/configs --cachedir /var/cache/build --prepare --clean --rpmlist /var/cache/obs/worker/root_5/.build.rpmlist /var/cache/obs/worker/root_5/.build-srcdir/python3-espressomd.spec build ... [ 1s] cycle: rpm-config-SUSE -> rpm [ 1s] breaking dependency rpm-config-SUSE -> rpm [ 1s] [1/30] preinstalling filesystem... [ 1s] [2/30] preinstalling permissions... [ 1s] [3/30] preinstalling glibc... [ 1s] [4/30] preinstalling fillup... [ 1s] [5/30] preinstalling libacl1... [ 2s] [6/30] preinstalling libattr1... [ 2s] [7/30] preinstalling libbz2-1... [ 2s] [8/30] preinstalling libcap2... [ 2s] [9/30] preinstalling libgcc_s1... [ 2s] [10/30] preinstalling liblua5_3-5... [ 2s] [11/30] preinstalling liblzma5... [ 2s] [12/30] preinstalling libpcre1... [ 2s] [13/30] preinstalling libpopt0... [ 2s] [14/30] preinstalling libz1... [ 2s] [15/30] preinstalling libzstd1... [ 2s] [16/30] preinstalling attr... [ 2s] [17/30] preinstalling libelf1... [ 2s] [18/30] preinstalling libncurses6... [ 2s] [19/30] preinstalling libselinux1... [ 3s] [20/30] preinstalling libreadline8... [ 3s] [21/30] preinstalling tar... [ 3s] [22/30] preinstalling bash... [ 3s] [23/30] preinstalling diffutils... [ 3s] [24/30] preinstalling grep... [ 3s] [25/30] preinstalling pam... [ 3s] [26/30] preinstalling sed... [ 3s] [27/30] preinstalling coreutils... [ 4s] [28/30] preinstalling aaa_base... [ 4s] [29/30] preinstalling rpm-config-SUSE... [ 4s] [30/30] preinstalling rpm... [ 4s] [ 4s] [1/12] preinstalling kernel-obs-build... [ 5s] [2/12] preinstalling libblkid1... [ 5s] [3/12] preinstalling libcrypt1... [ 5s] [4/12] preinstalling libdb-4_8... [ 5s] [5/12] preinstalling libmnl0... [ 5s] [6/12] preinstalling libsepol1... [ 5s] [7/12] preinstalling libsmartcols1... [ 5s] [8/12] preinstalling libuuid1... [ 5s] [9/12] preinstalling libmount1... [ 5s] [10/12] preinstalling perl-base... [ 6s] [11/12] preinstalling iproute2... [ 6s] [12/12] preinstalling util-linux... [ 6s] copying packages... [ 8s] reordering...cycle: libncurses6 -> terminfo-base [ 8s] breaking dependency terminfo-base -> libncurses6 [ 8s] cycle: info -> gzip [ 8s] breaking dependency info -> gzip [ 8s] cycle: libibverbs1 -> libibverbs -> libefa1 [ 8s] breaking dependency libibverbs -> libefa1 [ 8s] cycle: libibverbs1 -> libibverbs [ 8s] breaking dependency libibverbs -> libibverbs1 [ 8s] cycle: libibverbs1 -> libibverbs -> libmlx4-1 [ 8s] breaking dependency libibverbs -> libmlx4-1 [ 8s] cycle: libibverbs1 -> libibverbs -> libmlx5-1 [ 8s] breaking dependency libibverbs -> libmlx5-1 [ 8s] cycle: libcrack2 -> cracklib [ 8s] breaking dependency cracklib -> libcrack2 [ 8s] cycle: shadow -> pam [ 8s] breaking dependency pam -> shadow [ 8s] cycle: libtasn1-6 -> libtasn1 [ 8s] breaking dependency libtasn1 -> libtasn1-6 [ 8s] cycle: systemd -> udev [ 8s] breaking dependency systemd -> udev [ 8s] cycle: openmpi2-libs -> openmpi2 [ 8s] breaking dependency openmpi2-libs -> openmpi2 [ 8s] cycle: rpm -> rpm-config-SUSE [ 8s] breaking dependency rpm -> rpm-config-SUSE [ 8s] cycle: libdw1 -> libelf1 -> libebl-plugins [ 8s] breaking dependency libebl-plugins -> libdw1 [ 8s] cycle: libelf1 -> libebl-plugins [ 8s] breaking dependency libelf1 -> libebl-plugins [ 8s] done [ 9s] booting kvm... [ 9s] ### VM INTERACTION START ### [ 9s] linux64 /usr/bin/qemu-kvm -nodefaults -no-reboot -nographic -vga none -cpu host -object rng-random,filename=/dev/random,id=rng0 -device virtio-rng-pci,rng=rng0 -runas qemu -net none -kernel /var/cache/obs/worker/root_5/.mount/boot/kernel -initrd /var/cache/obs/worker/root_5/.mount/boot/initrd -append root=/dev/disk/by-id/virtio-0 rootfstype=ext4 rootflags=noatime ext4.allow_unsupported=1 kpti=off pti=off spectre_v2=off panic=1 quiet no-kvmclock elevator=noop nmi_watchdog=0 rw rd.driver.pre=binfmt_misc console=ttyS0 init=/.build/build -m 8192 -drive file=/var/cache/obs/worker/root_5/root,format=raw,if=none,id=disk,cache=unsafe -device virtio-blk-pci,drive=disk,serial=0 -drive file=/var/cache/obs/worker/root_5/swap,format=raw,if=none,id=swap,cache=unsafe -device virtio-blk-pci,drive=swap,serial=1 -serial stdio -chardev socket,id=monitor,server,nowait,path=/var/cache/obs/worker/root_5/root.qemu/monitor -mon chardev=monitor,mode=readline -smp 8 [ 10s] c[?7lSeaBIOS (version rel-1.12.0-0-ga698c89-rebuilt.opensuse.org) [ 14s] Booting from ROM..c[?7l[ 3.945041] dracut-pre-udev[291]: modprobe: FATAL: Module kqemu not found in directory /lib/modules/5.3.9-1-pae [ 14s] [ 3.980370] dracut-pre-udev[291]: modprobe: FATAL: Module ext2 not found in directory /lib/modules/5.3.9-1-pae [ 14s] [ 3.985190] dracut-pre-udev[291]: modprobe: FATAL: Module ext3 not found in directory /lib/modules/5.3.9-1-pae [ 14s] [ 4.522224] dracut-pre-udev[291]: modprobe: FATAL: Module nf_conntrack_ipv6 not found in directory /lib/modules/5.3.9-1-pae [ 14s] [ 4.536241] dracut-pre-udev[291]: modprobe: FATAL: Module virtio_mmio not found in directory /lib/modules/5.3.9-1-pae [ 14s] [ 4.595642] dracut-pre-udev[291]: modprobe: FATAL: Module ibmvscsi not found in directory /lib/modules/5.3.9-1-pae [ 14s] [ 4.610956] dracut-pre-udev[291]: modprobe: FATAL: Module ibmveth not found in directory /lib/modules/5.3.9-1-pae [ 16s] ### VM INTERACTION END ### [ 16s] 2nd stage started in virtual machine [ 16s] machine type: i686 [ 16s] [ 5.792284] sysrq: Changing Loglevel [ 16s] [ 5.793122] sysrq: Loglevel set to 4 [ 16s] Linux version: 5.3.9-1-pae #1 SMP Thu Nov 7 07:06:36 UTC 2019 (b0d4923) [ 16s] Increasing log level from now on... [ 16s] switching personality to 8... [ 16s] 2nd stage started in virtual machine [ 16s] machine type: i686 [ 16s] [ 5.882397] sysrq: Changing Loglevel [ 16s] Linux version: 5[ 5.883148] sysrq: Loglevel set to 4 [ 16s] .3.9-1-pae #1 SMP Thu Nov 7 07:06:36 UTC 2019 (b0d4923) [ 16s] Increasing log level from now on... [ 16s] Setting up swapspace version 1, size = 2 GiB (2097147904 bytes) [ 16s] no label, UUID=197a72f7-9bdb-4906-b4f0-ff087ef99770 [ 16s] swapon: /dev/vdb: found signature [pagesize=4096, signature=swap] [ 16s] swapon: /dev/vdb: pagesize=4096, swapsize=2097152000, devsize=2097152000 [ 16s] swapon /dev/vdb [ 16s] WARNING: udev not running, creating extra device nodes [ 16s] logging output to //.build.log... [ 16s] processing recipe /.build-srcdir/python3-espressomd.spec ... [ 16s] init_buildsystem --configdir /.build/configs --cachedir /var/cache/build /.build-srcdir/python3-espressomd.spec build ... [ 16s] running aaa_base preinstall script [ 16s] running aaa_base postinstall script [ 16s] Updating /etc/sysconfig/language ... [ 16s] Updating /etc/sysconfig/proxy ... [ 16s] Updating /etc/sysconfig/windowmanager ... [ 16s] chown: invalid user: 'root:root' [ 16s] chown: invalid user: 'root:root' [ 16s] initializing rpm db... [ 16s] querying package ids... 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gcc9-c++-9.2.1+r275327-1.2 [ 18s] [206/244] cumulate shadow-4.7-4.1 [ 18s] [207/244] cumulate gcc-PIE-9-1.6 [ 18s] [208/244] cumulate gcc-c++-9-1.6 [ 18s] [209/244] cumulate libboost_headers1_71_0-devel-1.71.0-3.1 [ 18s] [210/244] cumulate sysuser-shadow-3.0-1.2 [ 18s] [211/244] cumulate libboost_python-py2_7-1_71_0-devel-1.71.0-3.1 [ 18s] [212/244] cumulate libboost_python-py3-1_71_0-devel-1.71.0-3.1 [ 18s] [213/244] cumulate libboost_regex1_71_0-devel-1.71.0-3.1 [ 18s] [214/244] cumulate libboost_serialization1_71_0-devel-1.71.0-3.1 [ 18s] [215/244] cumulate libboost_system1_71_0-devel-1.71.0-3.1 [ 18s] [216/244] cumulate libboost_test1_71_0-devel-1.71.0-3.1 [ 18s] [217/244] cumulate libboost_filesystem1_71_0-devel-1.71.0-3.1 [ 18s] [218/244] cumulate system-group-hardware-20170617-8.2 [ 18s] [219/244] cumulate libboost_filesystem-devel-1.71.0-1.1 [ 18s] [220/244] cumulate libboost_system-devel-1.71.0-1.1 [ 18s] [221/244] cumulate libboost_test-devel-1.71.0-1.1 [ 18s] [222/244] cumulate libboost_graph1_71_0-devel-1.71.0-3.1 [ 18s] [223/244] cumulate libutempter0-1.1.6-10.14 [ 18s] [224/244] cumulate util-linux-2.34-4.2 [ 18s] [225/244] cumulate rpm-build-4.14.2.1-9.2 [ 18s] [226/244] cumulate systemd-243-3.1 [ 18s] [227/244] cumulate udev-243-3.1 [ 18s] [228/244] cumulate openssh-8.1p1-1.1 [ 18s] [229/244] cumulate rdma-core-25.1-3.1 [ 18s] [230/244] cumulate libibverbs-25.1-3.1 [ 18s] [231/244] cumulate libibverbs1-25.1-3.1 [ 18s] [232/244] cumulate libefa1-25.1-3.1 [ 18s] [233/244] cumulate libmlx4-1-25.1-3.1 [ 18s] [234/244] cumulate libmlx5-1-25.1-3.1 [ 18s] [235/244] cumulate librdmacm1-25.1-3.1 [ 18s] [236/244] cumulate rsocket-25.1-3.1 [ 18s] [237/244] cumulate libfabric1-1.8.1-1.1 [ 18s] [238/244] cumulate openmpi2-libs-2.1.6-8.1 [ 18s] [239/244] cumulate rdma-core-devel-25.1-3.1 [ 18s] [240/244] cumulate libboost_mpi1_71_0-1.71.0-3.1 [ 18s] [241/244] cumulate openmpi2-2.1.6-8.1 [ 18s] [242/244] cumulate openmpi2-devel-2.1.6-8.1 [ 18s] [243/244] cumulate libboost_mpi1_71_0-devel-1.71.0-3.1 [ 18s] [244/244] cumulate libboost_mpi-devel-1.71.0-1.1 [ 18s] now installing cumulated packages [ 19s] Preparing... ######################################## [ 19s] Updating / installing... [ 19s] boost-license1_71_0-1.71.0-3.1 ######################################## [ 19s] system-user-root-20190513-1.6 ######################################## [ 19s] filesystem-15.5-29.1 ######################################## [ 20s] glibc-2.30-1.2 ######################################## [ 20s] libz1-1.2.11-12.1 ######################################## [ 20s] libgcc_s1-9.2.1+r275327-1.2 ######################################## [ 20s] libstdc++6-9.2.1+r275327-1.2 ######################################## [ 20s] liblzma5-5.2.4-4.3 ######################################## [ 20s] libbz2-1-1.0.8-2.1 ######################################## [ 20s] libcrypt1-4.4.3-2.3 ######################################## [ 21s] perl-base-5.28.1-3.4 ######################################## [ 21s] libgmp10-6.1.2-4.4 ######################################## [ 21s] libopenssl1_1-1.1.1c-1.4 ######################################## [ 21s] terminfo-base-6.1-23.1 ######################################## [ 21s] libncurses6-6.1-23.1 ######################################## [ 21s] ncurses-utils-6.1-23.1 ######################################## [ 21s] libacl1-2.2.53-3.6 ######################################## [ 22s] libblkid1-2.34-4.2 ######################################## [ 22s] libaudit1-2.8.4-2.3 ######################################## [ 22s] libcap2-2.25-4.13 ######################################## [ 22s] libuuid1-2.34-4.2 ######################################## [ 22s] update-alternatives-1.19.0.5-5.2 ######################################## [ 22s] libmpfr6-4.0.2-2.2 ######################################## [ 22s] fillup-1.42-274.6 ######################################## [ 22s] libibumad3-25.1-3.1 ######################################## [ 22s] libpython3_7m1_0-3.7.3-1.4 ######################################## [ 22s] libmpc3-1.1.0-2.3 ######################################## [ 22s] libisl19-0.20-1.10 ######################################## [ 22s] libelf1-0.177-2.3 ######################################## [ 22s] libdw1-0.177-2.3 ######################################## [ 22s] libebl-plugins-0.177-2.3 ######################################## [ 23s] libxml2-2-2.9.9-2.2 ######################################## [ 23s] libdb-4_8-4.8.30-38.2 ######################################## [ 23s] libattr1-2.4.48-3.3 ######################################## [ 23s] libeconf0-0.3.3+git20191028.3ac14ce-1.######################################## [ 23s] libexpat1-2.2.8-1.2 ######################################## [ 23s] libpcre1-8.42-3.1 ######################################## [ 23s] libselinux1-2.9-5.2 ######################################## [ 23s] libpopt0-1.16-31.6 ######################################## [ 23s] libunistring2-0.9.10-2.5 ######################################## [ 23s] libidn2-0-2.2.0-2.1 ######################################## [ 23s] libmount1-2.34-4.2 ######################################## [ 25s] cpp9-9.2.1+r275327-1.2 ######################################## [ 25s] libibmad5-25.1-3.1 ######################################## [ 25s] chkstat-1550_20190913-7.1 ######################################## [ 25s] libreadline8-8.0-3.2 ######################################## [ 25s] bash-5.0.11-3.1 ######################################## [ 25s] xz-5.2.4-4.3 ######################################## [ 25s] libkmod2-26-1.5 ######################################## [ 25s] libboost_serialization1_71_0-1.71.0-3.######################################## [ 25s] libblogger2-2.19-3.1 ######################################## [ 25s] libcom_err2-1.45.4-1.1 ######################################## [ 25s] libffi7-3.2.1.git505-2.1 ######################################## [ 26s] libfftw3-3-3.3.8-2.1 ######################################## [ 26s] libgdbm6-1.18.1-1.6 ######################################## [ 26s] libgomp1-9.2.1+r275327-1.2 ######################################## [ 26s] libgpg-error0-1.36-2.2 ######################################## [ 26s] libgcrypt20-1.8.5-1.3 ######################################## [ 26s] liblz4-1-1.9.2-1.1 ######################################## [ 26s] libnettle7-3.5.1-2.2 ######################################## [ 26s] openblas-devel-headers-0.3.7-2.1 ######################################## [ 26s] netcfg-11.6-4.3 ######################################## [ 26s] libhogweed5-3.5.1-2.2 ######################################## [ 26s] libsystemd0-243-3.1 ######################################## [ 26s] libgdbm_compat4-1.18.1-1.6 ######################################## [ 29s] perl-5.28.1-3.4 ######################################## [ 29s] libfftw3_threads3-3.3.8-2.1 ######################################## [ 29s] libp11-kit0-0.23.12-2.5 ######################################## [ 29s] cpp-9-1.6 ######################################## [ 29s] bzip2-1.0.8-2.1 ######################################## [ 29s] cracklib-2.9.6-2.14 ######################################## [ 29s] libcrack2-2.9.6-2.14 ######################################## [ 29s] libibnetdisc5-25.1-3.1 ######################################## [ 29s] infiniband-diags-25.1-3.1 ######################################## [ 29s] libpsl5-0.21.0-2.2 ######################################## [ 29s] libglib-2_0-0-2.62.2-2.1 ######################################## [ 29s] libcroco-0_6-3-0.6.13-2.4 ######################################## [ 30s] gettext-runtime-0.19.8.1-13.4 ######################################## [ 30s] dwz-0.13-3.1 ######################################## [ 30s] libfdisk1-2.34-4.2 ######################################## [ 30s] libedit0-3.1.snap20180525-2.4 ######################################## [ 30s] libzio1-1.06-4.7 ######################################## [ 30s] info-6.7-1.1 ######################################## [ 30s] gzip-1.10-3.2 ######################################## [ 30s] coreutils-8.31-2.1 ######################################## [ 30s] grep-3.3-3.1 ######################################## [ 30s] diffutils-3.7-3.1 ######################################## [ 30s] sed-4.7-2.1 ######################################## [ 31s] cpio-2.12-8.1 ######################################## [ 31s] gawk-5.0.1-3.1 ######################################## [ 31s] update-alternatives: using /usr/bin/gawk to provide /bin/awk (awk) in auto mode [ 31s] findutils-4.7.0-1.2 ######################################## [ 31s] kmod-26-1.5 ######################################## [ 31s] make-4.2.1-7.10 ######################################## [ 31s] which-2.21-4.14 ######################################## [ 33s] binutils-2.32-8.1 ######################################## [ 33s] update-alternatives: using /usr/bin/ld.bfd to provide /usr/bin/ld (ld) in auto mode [ 34s] permissions-config-1550_20190913-7.1 ######################################## [ 34s] Updating /etc/sysconfig/security ... [ 34s] /usr/bin/wall: unknown group tty [ 34s] /usr/bin/write: unknown group tty [ 34s] Checking permissions and ownerships - using the permissions files [ 34s] /etc/permissions [ 34s] /etc/permissions.easy [ 34s] /etc/permissions.local [ 34s] setting /sbin/unix_chkpwd to root:shadow 4755. (wrong owner/group root:root) [ 34s] setting /sbin/unix2_chkpwd to root:shadow 4755. (wrong owner/group root:root) [ 34s] permissions-20190913-7.1 ######################################## [ 34s] systemd-rpm-macros-4-2.7 ######################################## [ 34s] linux-glibc-devel-5.3-1.1 ######################################## [ 35s] glibc-locale-base-2.30-1.2 ######################################## [ 44s] glibc-locale-2.30-1.2 ######################################## [ 44s] mpi-selector-1.0.3-13.11 ######################################## [ 44s] blog-2.19-3.1 ######################################## [ 44s] sysvinit-tools-2.96-1.1 ######################################## [ 44s] timezone-2019c-1.1 ######################################## [ 44s] tar-1.32-1.2 ######################################## [ 45s] libtasn1-4.14-1.2 ######################################## [ 45s] libtasn1-6-4.14-1.2 ######################################## [ 45s] libgnutls30-3.6.10-1.1 ######################################## [ 45s] gettext-tools-0.19.8.1-13.4 ######################################## [ 45s] libasan5-9.2.1+r275327-1.2 ######################################## [ 45s] libubsan1-9.2.1+r275327-1.2 ######################################## [ 45s] libboost_filesystem1_71_0-1.71.0-3.1 ######################################## [ 45s] libboost_python-py2_7-1_71_0-1.71.0-3.######################################## [ 46s] libboost_python-py3-1_71_0-1.71.0-3.1 ######################################## [ 46s] libboost_test1_71_0-1.71.0-3.1 ######################################## [ 46s] libapparmor1-2.13.3-3.1 ######################################## [ 46s] libargon2-1-0.0+git20171227.670229c-2.######################################## [ 46s] libatomic1-9.2.1+r275327-1.2 ######################################## [ 46s] libcap-ng0-0.7.9-2.2 ######################################## [ 46s] libgsl25-2.6-1.1 ######################################## [ 46s] libgslcblas0-2.6-1.1 ######################################## [ 46s] libinfinipath4-3.3-12.3 ######################################## [ 46s] libpsm_infinipath1-3.3-12.3 ######################################## [ 46s] libitm1-9.2.1+r275327-1.2 ######################################## [ 46s] libjson-c4-0.13.1-1.6 ######################################## [ 46s] libkeyutils1-1.6-1.3 ######################################## [ 46s] liblua5_3-5-5.3.5-2.1 ######################################## [ 46s] libmnl0-1.0.4-1.10 ######################################## [ 46s] iproute2-5.3-1.1 ######################################## [ 46s] libnghttp2-14-1.39.2-2.3 ######################################## [ 46s] libpcre2-8-0-10.33-1.4 ######################################## [ 46s] libpkgconf3-1.6.3-1.2 ######################################## [ 46s] pkgconf-1.6.3-1.2 ######################################## [ 46s] libqrencode4-4.0.2-1.1 ######################################## [ 47s] libquadmath0-9.2.1+r275327-1.2 ######################################## [ 47s] libgfortran5-9.2.1+r275327-1.2 ######################################## [ 48s] libopenblas_pthreads0-0.3.7-2.1 ######################################## [ 48s] update-alternatives: using /usr/lib/libopenblas_pthreads.so.0 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode [ 48s] update-alternatives: using /usr/lib/libopenblas_pthreads.so.0 to provide /usr/lib/libcblas.so.3 (libcblas.so.3) in auto mode [ 48s] update-alternatives: using /usr/lib/libopenblas_pthreads.so.0 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode [ 48s] update-alternatives: using /usr/lib/libopenblas_pthreads.so.0 to provide /usr/lib/libopenblas.so.0 (libopenblas_pthreads.so.0) in auto mode [ 48s] libopenblas_pthreads-devel-0.3.7-2.1 ######################################## [ 48s] openblas-devel-0.3.7-2.1 ######################################## [ 48s] librhash0-1.3.8-2.1 ######################################## [ 48s] libsasl2-3-2.1.27-1.6 ######################################## [ 48s] libldap-2_4-2-2.4.48-48.3 ######################################## [ 48s] libseccomp2-2.4.1-3.1 ######################################## [ 48s] libsepol1-2.9-2.3 ######################################## [ 48s] libsemanage1-2.9-3.3 ######################################## [ 48s] libsmartcols1-2.34-4.2 ######################################## [ 48s] libudev1-243-3.1 ######################################## [ 48s] libdevmapper1_03-1.02.163-4.1 ######################################## [ 48s] libcryptsetup12-2.1.0-2.4 ######################################## [ 48s] libuv1-1.31.0-1.1 ######################################## [ 48s] libverto1-0.2.6-7.15 ######################################## [ 48s] krb5-1.17-4.2 ######################################## [ 48s] libzstd1-1.4.4-1.1 ######################################## [ 48s] rpm-config-SUSE-0.g44-1.1 ######################################## [ 49s] rpm-4.14.2.1-9.2 ######################################## [ 49s] Updating /etc/sysconfig/services ... [ 49s] patch-2.7.6-3.14 ######################################## [ 49s] libboost_system1_71_0-1.71.0-3.1 ######################################## [ 49s] python-rpm-macros-20191104.08e6493-1.1######################################## [ 51s] python3-base-3.7.3-1.4 ######################################## [ 52s] python3-numpy-1.17.3-48.3 ######################################## [ 52s] pkgconf-m4-1.6.3-1.2 ######################################## [ 52s] pkgconf-pkg-config-1.6.3-1.2 ######################################## [ 52s] python3-devel-3.7.3-1.4 ######################################## [ 52s] libxcrypt-devel-4.4.3-2.3 ######################################## [ 52s] glibc-devel-2.30-1.2 ######################################## [ 55s] libstdc++6-devel-gcc9-9.2.1+r275327-1.######################################## [ 55s] libstdc++-devel-9-1.6 ######################################## [ 62s] libboost_headers1_71_0-devel-1.71.0-3.######################################## [ 67s] gcc9-9.2.1+r275327-1.2 ######################################## [ 67s] gcc-9-1.6 ######################################## [ 69s] gcc9-c++-9.2.1+r275327-1.2 ######################################## [ 69s] libboost_python-py2_7-1_71_0-devel-1.7######################################## [ 69s] libboost_python-py3-1_71_0-devel-1.71.######################################## [ 69s] libboost_serialization1_71_0-devel-1.7######################################## [ 69s] libboost_system1_71_0-devel-1.71.0-3.1######################################## [ 69s] libboost_test1_71_0-devel-1.71.0-3.1 ######################################## [ 69s] libboost_filesystem1_71_0-devel-1.71.0######################################## [ 69s] openmpi2-config-2.1.6-8.1 ######################################## [ 69s] libtirpc-netconfig-1.0.3-3.6 ######################################## [ 69s] libtirpc3-1.0.3-3.6 ######################################## [ 69s] libnsl2-1.2.0-2.14 ######################################## [ 69s] shadow-4.7-4.1 ######################################## [ 70s] pam-1.3.1+git20190923.ea78d67-1.3 ######################################## [ 70s] sysuser-shadow-3.0-1.2 ######################################## [ 70s] groupadd -r kmem [ 70s] groupadd -r lock [ 70s] groupadd -r -g 5 tty [ 70s] groupadd -r utmp [ 70s] groupadd -r audio [ 70s] groupadd -r cdrom [ 70s] groupadd -r dialout [ 70s] groupadd -r disk [ 70s] groupadd -r input [ 70s] groupadd -r kvm [ 70s] groupadd -r lp [ 70s] groupadd -r render [ 70s] groupadd -r tape [ 70s] groupadd -r video [ 70s] system-group-hardware-20170617-8.2 ######################################## [ 70s] libutempter0-1.1.6-10.14 ######################################## [ 70s] util-linux-2.34-4.2 ######################################## [ 70s] setting /usr/bin/wall to root:tty 2755. (wrong permissions 0755) [ 70s] setting /usr/bin/write to root:tty 2755. (wrong permissions 0755) [ 70s] grep: /etc/default/su: No such file or directory [ 71s] udev-243-3.1 ######################################## [ 71s] /usr/bin/udevadm: error while loading shared libraries: libsystemd-shared-243.so: cannot open shared object file: No such file or directory [ 72s] systemd-243-3.1 ######################################## [ 72s] /var/tmp/rpm-tmp.FGH75B: line 19: pam-config: command not found [ 72s] Running in chroot, ignoring request: daemon-reexec [ 72s] aaa_base-84.87+git20191017.bf0a315-1.1######################################## [ 72s] Updating /etc/sysconfig/language ... [ 72s] Updating /etc/sysconfig/proxy ... [ 72s] Updating /etc/sysconfig/windowmanager ... [ 72s] aaa_base-malloccheck-84.87+git20191017######################################## [ 72s] openssh-8.1p1-1.1 ######################################## [ 72s] Updating /etc/sysconfig/ssh ... [ 72s] Running in chroot, ignoring request: daemon-reload [ 72s] setting /etc/ssh/sshd_config to root:root 0640. (wrong permissions 0600) [ 72s] libssh-config-0.9.0-1.1 ######################################## [ 73s] libssh4-0.9.0-1.1 ######################################## [ 73s] libcurl4-7.67.0-1.1 ######################################## [ 73s] libnl-config-3.4-1.7 ######################################## [ 73s] libnl3-200-3.4-1.7 ######################################## [ 73s] rdma-core-25.1-3.1 ######################################## [ 73s] libefa1-25.1-3.1 ######################################## [ 73s] libmlx4-1-25.1-3.1 ######################################## [ 73s] libibverbs-25.1-3.1 ######################################## [ 73s] libibverbs1-25.1-3.1 ######################################## [ 73s] libmlx5-1-25.1-3.1 ######################################## [ 73s] librdmacm1-25.1-3.1 ######################################## [ 73s] rsocket-25.1-3.1 ######################################## [ 73s] rdma-core-devel-25.1-3.1 ######################################## [ 73s] libfabric1-1.8.1-1.1 ######################################## [ 73s] openmpi2-2.1.6-8.1 ######################################## [ 74s] openmpi2-libs-2.1.6-8.1 ######################################## [ 74s] libboost_mpi1_71_0-1.71.0-3.1 ######################################## [ 74s] openmpi2-devel-2.1.6-8.1 ######################################## [ 75s] libicu64_2-ledata-64.2-4.2 ######################################## [ 76s] libicu-suse64_2-64.2-4.2 ######################################## [ 76s] libboost_regex1_71_0-1.71.0-3.1 ######################################## [ 76s] libboost_graph1_71_0-1.71.0-3.1 ######################################## [ 76s] libboost_regex1_71_0-devel-1.71.0-3.1 ######################################## [ 76s] libboost_graph1_71_0-devel-1.71.0-3.1 ######################################## [ 76s] libboost_mpi1_71_0-devel-1.71.0-3.1 ######################################## [ 76s] file-magic-5.37-4.1 ######################################## [ 76s] libmagic1-5.37-4.1 ######################################## [ 76s] file-5.37-4.1 ######################################## [ 76s] librpmbuild8-4.14.2.1-9.2 ######################################## [ 77s] rpmlint-mini-1.10-10.32 ######################################## [ 77s] rpmlint-Factory-1.0-95.1 ######################################## [ 77s] rpm-build-4.14.2.1-9.2 ######################################## [ 77s] build-compare-20190814T133923.4dfa207-######################################## [ 77s] libboost_mpi-devel-1.71.0-1.1 ######################################## [ 79s] cmake-3.15.3-1.2 ######################################## [ 79s] post-build-checks-84.88+git20190716.5a######################################## [ 79s] libboost_filesystem-devel-1.71.0-1.1 ######################################## [ 79s] libboost_test-devel-1.71.0-1.1 ######################################## [ 79s] libboost_system-devel-1.71.0-1.1 ######################################## [ 79s] gcc-c++-9-1.6 ######################################## [ 79s] gcc-PIE-9-1.6 ######################################## [ 80s] fftw3-devel-3.3.8-2.1 ######################################## [ 80s] python3-Cython-0.29.13-1.1 ######################################## [ 80s] update-alternatives: using /usr/bin/cython-3.7 to provide /usr/bin/cython (cython) in auto mode [ 80s] python3-numpy-devel-1.17.3-48.3 ######################################## [ 81s] gsl-devel-2.6-1.1 ######################################## [ 81s] brp-check-suse-84.87+git20191016.914fe######################################## [ 81s] attr-2.4.48-3.3 ######################################## [ 81s] build-mkbaselibs-20190923-1.1 ######################################## [ 81s] hostname-3.21-1.5 ######################################## [ 81s] kernel-obs-build-5.3.9-1.2 ######################################## [ 81s] Creating /lib/udev -> /usr/lib/udev symlink. [ 82s] removing nis flags from //etc/nsswitch.conf... [ 82s] now finalizing build dir... [ 82s] RTNETLINK answers: File exists [ 82s] RTNETLINK answers: File exists [ 83s] ----------------------------------------------------------------- [ 83s] I have the following modifications for python3-espressomd.spec: [ 83s] 39c39 [ 83s] < Release: 0 [ 83s] --- [ 83s] > Release: 15.1 [ 83s] ----------------------------------------------------------------- [ 83s] ----- building python3-espressomd.spec (user abuild) [ 83s] ----------------------------------------------------------------- [ 83s] ----------------------------------------------------------------- [ 83s] + exec rpmbuild -ba --define '_srcdefattr (-,root,root)' --nosignature --define 'disturl obs://build.opensuse.org/home:cjunghans:branches:devel:languages:python:numeric/openSUSE_Tumbleweed/70adfc9456811c56fa860632187eaf56-python3-espressomd' /home/abuild/rpmbuild/SOURCES/python3-espressomd.spec [ 83s] setting SOURCE_DATE_EPOCH=1573819200 [ 83s] Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.Dld4US [ 83s] + umask 022 [ 83s] + cd /home/abuild/rpmbuild/BUILD [ 83s] + cd /home/abuild/rpmbuild/BUILD [ 83s] + rm -rf espresso [ 83s] + /usr/bin/gzip -dc /home/abuild/rpmbuild/SOURCES/espresso-4.1.1.tar.gz [ 83s] + /usr/bin/tar -xof - [ 84s] + STATUS=0 [ 84s] + '[' 0 -ne 0 ']' [ 84s] + cd espresso [ 84s] + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . [ 84s] + exit 0 [ 84s] Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.csRaiS [ 84s] + umask 022 [ 84s] + cd /home/abuild/rpmbuild/BUILD [ 84s] + /usr/bin/rm -rf /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386 [ 84s] ++ dirname /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386 [ 84s] + /usr/bin/mkdir -p /home/abuild/rpmbuild/BUILDROOT [ 84s] + /usr/bin/mkdir /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386 [ 84s] + cd espresso [ 84s] + source /usr/lib/mpi/gcc/openmpi2/bin/mpivars.sh [ 84s] ++ case $PATH in [ 84s] ++ PATH=/usr/lib/mpi/gcc/openmpi2/bin:/usr/local/bin:/usr/bin:/bin [ 84s] ++ case $MANPATH in [ 84s] ++ MANPATH=/usr/lib/mpi/gcc/openmpi2/share/man: [ 84s] ++ export MANPATH [ 84s] ++ case $LD_LIBRARY_PATH in [ 84s] ++ '[' -z '' ']' [ 84s] ++ LD_LIBRARY_PATH=/usr/lib/mpi/gcc/openmpi2/lib [ 84s] ++ export LD_LIBRARY_PATH [ 84s] + find . -name CMakeLists.txt -exec sed -i -re '/^[[:blank:]]*[sS][eE][tT][[:blank:]]*\([[:blank:]]*(CMAKE_BUILD_TYPE|CMAKE_COLOR_MAKEFILE|CMAKE_INSTALL_PREFIX|CMAKE_VERBOSE_MAKEFILE).*\)/{s/^/#IGNORE /}' '{}' + [ 84s] + mkdir -p build [ 84s] + cd build [ 84s] + /usr/bin/cmake /home/abuild/rpmbuild/BUILD/espresso/. '-GUnix Makefiles' -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib -DCMAKE_BUILD_TYPE=RelWithDebInfo '-DCMAKE_C_FLAGS=-fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG' '-DCMAKE_CXX_FLAGS=-fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG' '-DCMAKE_Fortran_FLAGS=-fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG' '-DCMAKE_EXE_LINKER_FLAGS= -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now' '-DCMAKE_MODULE_LINKER_FLAGS= -Wl,--as-needed' '-DCMAKE_SHARED_LINKER_FLAGS= -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now' -DCMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_STATIC_LIBS:BOOL=OFF -DCMAKE_COLOR_MAKEFILE:BOOL=OFF -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_MODULES_INSTALL_DIR=/usr/share/cmake/Modules '-DCMAKE_SHARED_LINKER_FLAGS=-Wl,--as-needed -Wl,-z,now' -DLIBDIR=lib -DPYTHON_EXECUTABLE=/usr/bin/python3 -DINSTALL_PYPRESSO=OFF [ 84s] -- The C compiler identification is GNU 9.2.1 [ 84s] -- The CXX compiler identification is GNU 9.2.1 [ 84s] -- Check for working C compiler: /usr/bin/cc [ 84s] -- Check for working C compiler: /usr/bin/cc -- works [ 84s] -- Detecting C compiler ABI info [ 84s] -- Detecting C compiler ABI info - done [ 85s] -- Detecting C compile features [ 85s] -- Detecting C compile features - done [ 85s] -- Check for working CXX compiler: /usr/bin/c++ [ 85s] -- Check for working CXX compiler: /usr/bin/c++ -- works [ 85s] -- Detecting CXX compiler ABI info [ 85s] -- Detecting CXX compiler ABI info - done [ 85s] -- Detecting CXX compile features [ 85s] -- Detecting CXX compile features - done [ 85s] -- Config file: /home/abuild/rpmbuild/BUILD/espresso/src/config/myconfig-default.hpp [ 85s] -- Performing Test result__PRETTY_FUNCTION__ [ 85s] -- Performing Test result__PRETTY_FUNCTION__ - Success [ 85s] CUDA_TOOLKIT_ROOT_DIR not found or specified [ 85s] -- Could NOT find CUDA (missing: CUDA_TOOLKIT_ROOT_DIR CUDA_NVCC_EXECUTABLE CUDA_INCLUDE_DIRS CUDA_CUDART_LIBRARY) (Required is at least version "9.0") [ 85s] -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.7.3", minimum required is "3.3") [ 85s] -- Found PythonInterp: /usr/bin/python3 (found version "3.7.3") [ 86s] -- Found Cython version 0.29.13 [ 86s] -- Found Cython: /usr/bin/cython (Required is at least version "0.23") [ 86s] -- Found NumPy: /usr/lib/python3.7/site-packages/numpy/core/include (found version "1.17.3") [ 86s] -- NumPy ver. 1.17.3 found (include: /usr/lib/python3.7/site-packages/numpy/core/include) [ 86s] -- Found FFTW3: /usr/lib/libfftw3.so [ 86s] -- Could NOT find HDF5: Found unsuitable version "", but required is at least "1.8" (found HDF5_hdf5_LIBRARY-NOTFOUND) [ 86s] -- Found PkgConfig: /usr/bin/pkg-config (found version "1.6.3") [ 86s] -- Found GSL: /usr/include (found version "2.6") [ 86s] -- Found MPI_C: /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so (found suitable version "3.1", minimum required is "3.0") [ 87s] -- Found MPI_CXX: /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so (found suitable version "3.1", minimum required is "3.0") [ 87s] -- Found MPI: TRUE (found suitable version "3.1", minimum required is "3.0") [ 87s] -- Found Boost: /usr/lib/cmake/Boost-1.71.0/BoostConfig.cmake (found suitable version "1.71.0", minimum required is "1.67.0") found components: mpi serialization filesystem system unit_test_framework [ 87s] -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) [ 87s] -- Could NOT find Sphinx (missing: SPHINX_EXECUTABLE SPHINX_API_DOC_EXE) (Required is at least version "1.6.6") [ 87s] -- Could NOT find Git (missing: GIT_EXECUTABLE) [ 87s] -- The following OPTIONAL packages have been found: [ 87s] [ 87s] * FFTW3 [ 87s] * PkgConfig [ 87s] * GSL [ 87s] [ 87s] -- The following REQUIRED packages have been found: [ 87s] [ 87s] * PythonInterp [ 87s] * Cython (required version >= 0.23) [ 87s] * NumPy [ 87s] * MPI (required version >= 3.0) [ 87s] * boost_mpi (required version == 1.71.0) [ 87s] * boost_serialization (required version == 1.71.0) [ 87s] * boost_filesystem (required version == 1.71.0) [ 87s] * boost_system (required version == 1.71.0) [ 87s] * boost_headers (required version == 1.71.0) [ 87s] * boost_unit_test_framework (required version == 1.71.0) [ 87s] * Boost (required version >= 1.67.0) [ 87s] [ 87s] -- The following OPTIONAL packages have not been found: [ 87s] [ 87s] * CUDA (required version >= 9.0) [ 87s] * HDF5 (required version >= 1.8) [ 87s] * Doxygen [ 87s] * Sphinx (required version >= 1.6.6) [ 87s] * Git [ 87s] [ 88s] -- Configuring done [ 89s] -- Generating done [ 89s] CMake Warning: [ 89s] Manually-specified variables were not used by the project: [ 89s] [ 89s] BUILD_STATIC_LIBS [ 89s] CMAKE_Fortran_FLAGS [ 89s] CMAKE_INSTALL_DO_STRIP [ 89s] CMAKE_MODULES_INSTALL_DIR [ 89s] INCLUDE_INSTALL_DIR [ 89s] LIBDIR [ 89s] LIB_INSTALL_DIR [ 89s] SHARE_INSTALL_PREFIX [ 89s] SYSCONF_INSTALL_DIR [ 89s] [ 89s] [ 89s] -- Build files have been written to: /home/abuild/rpmbuild/BUILD/espresso/build [ 89s] + echo 'Deprecated %make_jobs macro used, please use %cmake_build' [ 89s] Deprecated %make_jobs macro used, please use %cmake_build [ 89s] + /usr/bin/make -O VERBOSE=1 -j8 [ 89s] /usr/bin/cmake -S/home/abuild/rpmbuild/BUILD/espresso -B/home/abuild/rpmbuild/BUILD/espresso/build --check-build-system CMakeFiles/Makefile.cmake 0 [ 89s] /usr/bin/cmake -E cmake_progress_start /home/abuild/rpmbuild/BUILD/espresso/build/CMakeFiles /home/abuild/rpmbuild/BUILD/espresso/build/CMakeFiles/progress.marks [ 89s] /usr/bin/make -f CMakeFiles/Makefile2 all [ 89s] /usr/bin/make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/depend [ 89s] /usr/bin/make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/depend [ 89s] /usr/bin/make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/depend [ 89s] /usr/bin/make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/depend [ 89s] /usr/bin/make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/depend [ 89s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/pdbparser /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser /home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser/CMakeFiles/pdbparser.dir/DependInfo.cmake [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser/CMakeFiles/pdbparser.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser/CMakeFiles/pdbparser.dir/depend.internal". [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser/CMakeFiles/pdbparser.dir/depend.internal". [ 89s] Scanning dependencies of target pdbparser [ 89s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] /usr/bin/make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/build [ 89s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/config /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/config /home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/version.dir/DependInfo.cmake [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/version.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/version.dir/depend.internal". [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/version.dir/depend.internal". [ 89s] Scanning dependencies of target version [ 89s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] /usr/bin/make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/build [ 89s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/config /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/config /home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/generate_config_features.dir/DependInfo.cmake [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/generate_config_features.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/generate_config_features.dir/depend.internal". [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/generate_config_features.dir/depend.internal". [ 89s] Scanning dependencies of target generate_config_features [ 89s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] /usr/bin/make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/build [ 89s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/CMakeFiles/myconfig.dir/DependInfo.cmake [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/CMakeFiles/myconfig.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/CMakeFiles/myconfig.dir/depend.internal". [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/CMakeFiles/myconfig.dir/depend.internal". [ 89s] Scanning dependencies of target myconfig [ 89s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] /usr/bin/make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/build [ 89s] make[2]: Nothing to be done for 'CMakeFiles/myconfig.dir/build'. [ 89s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/config && /usr/bin/cmake -DPROJECT_SOURCE_DIR=/home/abuild/rpmbuild/BUILD/espresso -DPROJECT_VERSION=4.1.1 -DGIT_EXECUTABLE=GIT_EXECUTABLE-NOTFOUND -P /home/abuild/rpmbuild/BUILD/espresso/cmake/version.cmake [ 89s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] [ 0%] Built target myconfig [ 89s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] /usr/bin/make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/depend [ 89s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] [ 0%] Built target version [ 89s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/config /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/config /home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/check_myconfig.dir/DependInfo.cmake [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/check_myconfig.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/check_myconfig.dir/depend.internal". [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/check_myconfig.dir/depend.internal". [ 89s] Scanning dependencies of target check_myconfig [ 89s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] /usr/bin/make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/build [ 89s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/object_in_fluid /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/DependInfo.cmake [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/depend.internal". [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/depend.internal". [ 89s] Scanning dependencies of target object_in_fluid [ 89s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] [ 0%] Generating config-features.hpp, config-features.cpp [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/config && /usr/bin/python3 /home/abuild/rpmbuild/BUILD/espresso/src/config/gen_featureconfig.py /home/abuild/rpmbuild/BUILD/espresso/src/config/features.def /home/abuild/rpmbuild/BUILD/espresso/build/src/config/config-features.hpp /home/abuild/rpmbuild/BUILD/espresso/build/src/config/config-features.cpp [ 89s] Reading definitions from /home/abuild/rpmbuild/BUILD/espresso/src/config/features.def... [ 89s] Done. [ 89s] Writing /home/abuild/rpmbuild/BUILD/espresso/build/src/config/config-features.hpp... [ 89s] Done. [ 89s] Writing /home/abuild/rpmbuild/BUILD/espresso/build/src/config/config-features.cpp... [ 89s] Done. [ 89s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] /usr/bin/make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build [ 89s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] [ 0%] Built target generate_config_features [ 89s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/object_in_fluid/__init__.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid//__init__.py [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/object_in_fluid/oif_classes.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid//oif_classes.py [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/object_in_fluid/oif_utils.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid//oif_utils.py [ 89s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] [ 0%] Built target object_in_fluid [ 89s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/config && /usr/bin/python3 /home/abuild/rpmbuild/BUILD/espresso/src/config/check_myconfig.py /usr/bin/c++ /home/abuild/rpmbuild/BUILD/espresso/src/config/features.def /home/abuild/rpmbuild/BUILD/espresso/build/src/config/myconfig-final.hpp cmake_config.hpp [ 89s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] [ 0%] Built target check_myconfig [ 89s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] /usr/bin/make -f src/config/CMakeFiles/EspressoConfig.dir/build.make src/config/CMakeFiles/EspressoConfig.dir/depend [ 89s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/config /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/config /home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/EspressoConfig.dir/DependInfo.cmake [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/EspressoConfig.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/EspressoConfig.dir/depend.internal". [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/EspressoConfig.dir/depend.internal". [ 89s] Scanning dependencies of target EspressoConfig [ 89s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] /usr/bin/make -f src/config/CMakeFiles/EspressoConfig.dir/build.make src/config/CMakeFiles/EspressoConfig.dir/build [ 89s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] [ 0%] Building CXX object src/config/CMakeFiles/EspressoConfig.dir/config-features.cpp.o [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/config && /usr/bin/c++ -DEspressoConfig_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -std=c++14 -o CMakeFiles/EspressoConfig.dir/config-features.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/config/config-features.cpp [ 89s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] [ 0%] Linking CXX shared library EspressoConfig.so [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/config && /usr/bin/cmake -E cmake_link_script CMakeFiles/EspressoConfig.dir/link.txt --verbose=1 [ 89s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,EspressoConfig.so -o EspressoConfig.so CMakeFiles/EspressoConfig.dir/config-features.cpp.o [ 89s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] [ 0%] Built target EspressoConfig [ 89s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] /usr/bin/make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/depend [ 89s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] [ 0%] Generating gen_pxiconfig.cpp [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/python3 /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/gen_pxiconfig.py /home/abuild/rpmbuild/BUILD/espresso/src/config/features.def /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/gen_pxiconfig.cpp [ 89s] Reading definitions from /home/abuild/rpmbuild/BUILD/espresso/src/config/features.def... [ 89s] Done. [ 89s] Writing /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/gen_pxiconfig.cpp... [ 89s] Done. [ 89s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/DependInfo.cmake [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/depend.internal". [ 89s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/depend.internal". [ 89s] Scanning dependencies of target gen_pxiconfig [ 89s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 89s] /usr/bin/make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build [ 90s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 90s] [ 1%] Building CXX object src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o [ 90s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/gen_pxiconfig.cpp [ 90s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 90s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 90s] [ 1%] Linking CXX executable gen_pxiconfig [ 90s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/gen_pxiconfig.dir/link.txt --verbose=1 [ 90s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o -o gen_pxiconfig ../../config/EspressoConfig.so [ 90s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 90s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 90s] [ 1%] Built target gen_pxiconfig [ 90s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 91s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 91s] [ 0%] Building CXX object src/pdbparser/CMakeFiles/pdbparser.dir/src/PdbParser.cpp.o [ 91s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser && /usr/bin/c++ -Dpdbparser_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -std=c++14 -o CMakeFiles/pdbparser.dir/src/PdbParser.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/src/PdbParser.cpp [ 91s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 91s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 91s] [ 1%] Linking CXX shared library pdbparser.so [ 91s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbparser.dir/link.txt --verbose=1 [ 91s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,pdbparser.so -o pdbparser.so CMakeFiles/pdbparser.dir/src/PdbParser.cpp.o [ 91s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 91s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 91s] [ 1%] Built target pdbparser [ 91s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 91s] /usr/bin/make -f src/core/CMakeFiles/EspressoCore.dir/build.make src/core/CMakeFiles/EspressoCore.dir/depend [ 91s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 91s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core /home/abuild/rpmbuild/BUILD/espresso/build/src/core/CMakeFiles/EspressoCore.dir/DependInfo.cmake [ 91s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/core/CMakeFiles/EspressoCore.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/core/CMakeFiles/EspressoCore.dir/depend.internal". [ 91s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/core/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/core/CMakeFiles/EspressoCore.dir/depend.internal". [ 91s] Scanning dependencies of target EspressoCore [ 91s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 91s] /usr/bin/make -f src/core/CMakeFiles/EspressoCore.dir/build.make src/core/CMakeFiles/EspressoCore.dir/build [ 93s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 93s] [ 3%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/accumulators.cpp.o [ 93s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/accumulators.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/accumulators.cpp [ 93s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 95s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 95s] [ 3%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/comfixed_global.cpp.o [ 95s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/comfixed_global.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/comfixed_global.cpp [ 95s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 96s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 96s] [ 4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/debug.cpp.o [ 96s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/debug.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/debug.cpp [ 96s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 97s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 97s] [ 4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/constraints.cpp.o [ 97s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK 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/home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/reaction_ensemble.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/reaction_ensemble.cpp [ 134s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 135s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 135s] [ 14%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/RuntimeErrorCollector.cpp.o [ 135s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK 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/usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/tuning.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/tuning.cpp [ 136s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 137s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 137s] [ 19%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/actor/ActorList.cpp.o [ 137s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK 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-isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/thermostat.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/thermostat.cpp [ 138s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 139s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 139s] [ 17%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites.cpp.o [ 139s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK 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/usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/actor/DipolarBarnesHut.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/actor/DipolarBarnesHut.cpp [ 142s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 143s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 143s] [ 19%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/actor/DipolarDirectSum.cpp.o [ 143s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g 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-I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/statistics_chain.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/statistics_chain.cpp [ 143s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 144s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 144s] [ 20%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/actor/Mmm1dgpuForce.cpp.o [ 144s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces 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-I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/accumulators/MeanVarianceCalculator.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/accumulators/MeanVarianceCalculator.cpp [ 144s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 148s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 148s] [ 20%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cosine.cpp.o [ 148s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cosine.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/bonded_interactions/angle_cosine.cpp [ 148s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 148s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 148s] [ 19%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/accumulators/Correlator.cpp.o [ 148s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/accumulators/Correlator.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/accumulators/Correlator.cpp [ 148s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 148s] make[2]: 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-Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/statistics.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/statistics.cpp [ 148s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 148s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 148s] [ 20%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cossquare.cpp.o [ 148s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cossquare.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/bonded_interactions/angle_cossquare.cpp [ 148s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 149s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 149s] [ 20%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/angle_harmonic.cpp.o [ 149s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/angle_harmonic.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/bonded_interactions/angle_harmonic.cpp [ 149s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 149s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 149s] [ 20%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_coulomb.cpp.o [ 149s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_coulomb.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/bonded_interactions/bonded_coulomb.cpp [ 149s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 150s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 150s] [ 22%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_coulomb_sr.cpp.o [ 150s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_coulomb_sr.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/bonded_interactions/bonded_coulomb_sr.cpp [ 150s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 153s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 153s] [ 22%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_interaction_data.cpp.o [ 153s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ 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-I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/dihedral.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/bonded_interactions/dihedral.cpp [ 154s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 154s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 154s] [ 22%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_tab.cpp.o [ 154s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/bonded_tab.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/bonded_interactions/bonded_tab.cpp [ 154s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 154s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 154s] [ 22%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/fene.cpp.o [ 154s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/fene.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/bonded_interactions/fene.cpp [ 154s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 154s] make[2]: 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-fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/harmonic.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/bonded_interactions/harmonic.cpp [ 154s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 155s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 155s] [ 24%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/harmonic_dumbbell.cpp.o [ 155s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core 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/home/abuild/rpmbuild/BUILD/espresso/src/core/bonded_interactions/harmonic_dumbbell.cpp [ 155s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 156s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 156s] [ 24%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/quartic.cpp.o [ 156s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/quartic.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/bonded_interactions/quartic.cpp [ 156s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 159s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 159s] [ 25%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/umbrella.cpp.o [ 159s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread 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-I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/bonded_interactions/subt_lj.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/bonded_interactions/subt_lj.cpp [ 159s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 160s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 160s] [ 25%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/debye_hueckel.cpp.o [ 160s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare 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-I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/constraints/HomogeneousMagneticField.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/constraints/HomogeneousMagneticField.cpp [ 160s] make[2]: Leaving 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-I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/constraints/ShapeBasedConstraint.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/constraints/ShapeBasedConstraint.cpp [ 165s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 166s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 166s] [ 29%] Building CXX object 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-Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/mmm-common.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/electrostatics_magnetostatics/mmm-common.cpp [ 166s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 166s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 166s] [ 27%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/mmm1d.cpp.o [ 166s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/mmm1d.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/electrostatics_magnetostatics/mmm1d.cpp [ 166s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' 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/home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/fft.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/electrostatics_magnetostatics/fft.cpp [ 171s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 174s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 174s] [ 30%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/coulomb.cpp.o [ 174s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ 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'/home/abuild/rpmbuild/BUILD/espresso/build' [ 177s] [ 32%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lattice.cpp.o [ 177s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lattice.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/grid_based_algorithms/lattice.cpp [ 177s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 178s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 178s] [ 29%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/electrostatics_magnetostatics/p3m-dipolar.cpp.o [ 178s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM 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-I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_boundaries.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/grid_based_algorithms/lb_boundaries.cpp [ 181s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 184s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 184s] [ 33%] Building CXX object 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/home/abuild/rpmbuild/BUILD/espresso/src/core/nonbonded_interactions/bmhtf-nacl.cpp [ 186s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 188s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 188s] [ 35%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/immersed_boundary/ibm_triel.cpp.o [ 188s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/immersed_boundary/ibm_triel.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/immersed_boundary/ibm_triel.cpp [ 188s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 188s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 188s] [ 37%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/gay_berne.cpp.o [ 188s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/gay_berne.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/nonbonded_interactions/gay_berne.cpp [ 188s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 188s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 188s] [ 32%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_collective_interface.cpp.o [ 188s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_collective_interface.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/grid_based_algorithms/lb_collective_interface.cpp [ 188s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 188s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 188s] [ 33%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_particle_coupling.cpp.o [ 188s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_particle_coupling.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/grid_based_algorithms/lb_particle_coupling.cpp [ 188s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 189s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 189s] [ 35%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/immersed_boundary/ImmersedBoundaries.cpp.o [ 189s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/immersed_boundary/ImmersedBoundaries.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/immersed_boundary/ImmersedBoundaries.cpp [ 189s] make[2]: Leaving 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-D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb_interface.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/grid_based_algorithms/lb_interface.cpp [ 190s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 192s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 192s] [ 35%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/gaussian.cpp.o [ 192s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o 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-I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/morse.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/nonbonded_interactions/morse.cpp [ 192s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 193s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 193s] [ 33%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid_based_algorithms/lb.cpp.o [ 193s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces 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-I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/hat.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/nonbonded_interactions/hat.cpp [ 195s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 195s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 195s] [ 37%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/hertzian.cpp.o [ 195s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/hertzian.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/nonbonded_interactions/hertzian.cpp [ 195s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 195s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 195s] [ 37%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljcos.cpp.o [ 195s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljcos.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/nonbonded_interactions/ljcos.cpp [ 195s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 195s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 195s] [ 40%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/thole.cpp.o [ 195s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/thole.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/nonbonded_interactions/thole.cpp [ 195s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 195s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 195s] [ 37%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/ljcos2.cpp.o [ 195s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core 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/home/abuild/rpmbuild/BUILD/espresso/src/core/nonbonded_interactions/ljcos2.cpp [ 195s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 195s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 195s] [ 38%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/lj.cpp.o [ 195s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/lj.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/nonbonded_interactions/lj.cpp [ 195s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 196s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 196s] [ 41%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/object-in-fluid/membrane_collision.cpp.o [ 196s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread 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198s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces 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-I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/object-in-fluid/out_direction.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/object-in-fluid/out_direction.cpp [ 198s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 198s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 198s] [ 40%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/nonbonded_tab.cpp.o [ 198s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/nonbonded_tab.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/nonbonded_interactions/nonbonded_tab.cpp [ 198s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 200s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 200s] [ 40%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/soft_sphere.cpp.o [ 200s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/soft_sphere.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/nonbonded_interactions/soft_sphere.cpp [ 200s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 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-fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/smooth_step.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/nonbonded_interactions/smooth_step.cpp [ 200s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 200s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 200s] [ 40%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/wca.cpp.o [ 200s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core 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/home/abuild/rpmbuild/BUILD/espresso/src/core/nonbonded_interactions/wca.cpp [ 200s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 202s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 202s] [ 41%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/object-in-fluid/oif_local_forces.cpp.o [ 202s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/object-in-fluid/oif_local_forces.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/object-in-fluid/oif_local_forces.cpp [ 202s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 202s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 202s] [ 41%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/object-in-fluid/oif_global_forces.cpp.o [ 202s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/object-in-fluid/oif_global_forces.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/object-in-fluid/oif_global_forces.cpp [ 202s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 202s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 202s] [ 45%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites/virtual_sites_com.cpp.o [ 202s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites/virtual_sites_com.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/virtual_sites/virtual_sites_com.cpp [ 202s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 202s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 202s] [ 38%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nonbonded_interactions/nonbonded_interaction_data.cpp.o [ 202s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/nonbonded_interactions/nonbonded_interaction_data.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/nonbonded_interactions/nonbonded_interaction_data.cpp [ 202s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 205s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 205s] [ 45%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites/VirtualSitesInertialessTracers.cpp.o [ 206s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites/VirtualSitesInertialessTracers.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/virtual_sites/VirtualSitesInertialessTracers.cpp [ 206s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 206s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 206s] [ 43%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites/lb_inertialess_tracers.cpp.o [ 206s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites/lb_inertialess_tracers.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/virtual_sites/lb_inertialess_tracers.cpp [ 206s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 208s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 208s] [ 43%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/observables/CylindricalLBVelocityProfile.cpp.o [ 208s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o 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-I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/observables/LBVelocityProfile.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/observables/LBVelocityProfile.cpp [ 209s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 210s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 210s] [ 45%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites/VirtualSitesRelative.cpp.o [ 210s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites/VirtualSitesRelative.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/virtual_sites/VirtualSitesRelative.cpp [ 210s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 210s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 210s] [ 45%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites/lb_inertialess_tracers_cuda_interface.cpp.o [ 211s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/virtual_sites/lb_inertialess_tracers_cuda_interface.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/virtual_sites/lb_inertialess_tracers_cuda_interface.cpp [ 211s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 211s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 211s] [ 46%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/observables/PidObservable.cpp.o [ 211s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/observables/PidObservable.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/observables/PidObservable.cpp [ 211s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 213s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 213s] [ 43%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp.o [ 213s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp [ 213s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 213s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 213s] [ 43%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp.o [ 213s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/core/SYSTEM -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoCore.dir/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp [ 213s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 214s] 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-Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/Shapes.dir/HollowCone.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/shapes/HollowCone.cpp [ 219s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 220s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 220s] [ 50%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/SimplePore.cpp.o [ 220s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/shapes && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/Shapes.dir/SimplePore.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/shapes/SimplePore.cpp [ 220s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 220s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 220s] [ 50%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Slitpore.cpp.o [ 220s] cd 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-Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/Shapes.dir/Sphere.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/shapes/Sphere.cpp [ 220s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 221s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 221s] [ 51%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/SpheroCylinder.cpp.o [ 221s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/shapes && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/Shapes.dir/SpheroCylinder.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/shapes/SpheroCylinder.cpp [ 221s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 222s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 222s] [ 51%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Torus.cpp.o [ 222s] cd 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-Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/Shapes.dir/Stomatocyte.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/shapes/Stomatocyte.cpp [ 222s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 222s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 222s] [ 48%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Rhomboid.cpp.o [ 222s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/shapes && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -DShapes_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/Shapes.dir/Rhomboid.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/shapes/Rhomboid.cpp [ 222s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 222s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 222s] [ 51%] Building CXX object src/core/shapes/CMakeFiles/Shapes.dir/Wall.cpp.o [ 222s] cd 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/home/abuild/rpmbuild/BUILD/espresso/src/core/shapes/Wall.cpp [ 222s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 222s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 222s] [ 50%] Building CXX object src/core/io/reader/CMakeFiles/pdbreader.dir/readpdb.cpp.o [ 222s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/io/reader && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Dpdbreader_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/pdbreader.dir/readpdb.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader/readpdb.cpp [ 222s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 223s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 223s] [ 51%] Linking CXX shared library pdbreader.so [ 223s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/io/reader && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbreader.dir/link.txt --verbose=1 [ 223s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,pdbreader.so -o pdbreader.so CMakeFiles/pdbreader.dir/readpdb.cpp.o ../../EspressoCore.so ../../../pdbparser/pdbparser.so ../../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so [ 223s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 223s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 223s] [ 51%] Linking CXX shared library Shapes.so [ 223s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/shapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/Shapes.dir/link.txt --verbose=1 [ 223s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,Shapes.so -o Shapes.so CMakeFiles/Shapes.dir/Cylinder.cpp.o CMakeFiles/Shapes.dir/Ellipsoid.cpp.o CMakeFiles/Shapes.dir/HollowCone.cpp.o CMakeFiles/Shapes.dir/Rhomboid.cpp.o CMakeFiles/Shapes.dir/SimplePore.cpp.o CMakeFiles/Shapes.dir/Slitpore.cpp.o CMakeFiles/Shapes.dir/Sphere.cpp.o CMakeFiles/Shapes.dir/SpheroCylinder.cpp.o CMakeFiles/Shapes.dir/Stomatocyte.cpp.o CMakeFiles/Shapes.dir/Torus.cpp.o CMakeFiles/Shapes.dir/Wall.cpp.o ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so -Wl,-rpath-link,/home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser [ 223s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 223s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 223s] [ 51%] Built target pdbreader [ 223s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 223s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 223s] [ 51%] Built target Shapes [ 223s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 224s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 224s] [ 46%] Building CXX object src/core/io/mpiio/CMakeFiles/mpiio.dir/mpiio.cpp.o [ 224s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/io/mpiio && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Dmpiio_EXPORTS 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Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 224s] [ 51%] Linking CXX shared library mpiio.so [ 224s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/io/mpiio && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpiio.dir/link.txt --verbose=1 [ 224s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,mpiio.so -o mpiio.so CMakeFiles/mpiio.dir/mpiio.cpp.o ../../EspressoCore.so ../../../config/EspressoConfig.so /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 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-I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/collision_detection/initialize.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/script_interface/collision_detection/initialize.cpp [ 252s] make[2]: Leaving directory 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/home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/initialize.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/script_interface/initialize.cpp [ 253s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 257s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 257s] [ 53%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/virtual_sites/initialize.cpp.o [ 257s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/script_interface && /usr/bin/c++ 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-Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/virtual_sites/initialize.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/script_interface/virtual_sites/initialize.cpp [ 257s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 257s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 257s] [ 53%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/lbboundaries/initialize.cpp.o [ 257s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/script_interface && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoScriptInterface_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/lbboundaries/initialize.cpp.o -c 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-I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/cluster_analysis/initialize.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/script_interface/cluster_analysis/initialize.cpp [ 258s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 258s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 258s] [ 51%] Building 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-fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/accumulators/initialize.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/script_interface/accumulators/initialize.cpp [ 258s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 266s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 266s] [ 54%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/mpiio/initialize.cpp.o [ 267s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/script_interface && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoScriptInterface_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/mpiio/initialize.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/script_interface/mpiio/initialize.cpp [ 267s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 273s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 273s] [ 54%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/pair_criteria/initialize.cpp.o [ 273s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/script_interface && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoScriptInterface_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/pair_criteria/initialize.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/script_interface/pair_criteria/initialize.cpp [ 273s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 274s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 274s] [ 53%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/constraints/initialize.cpp.o [ 274s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/script_interface && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoScriptInterface_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/constraints/initialize.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/script_interface/constraints/initialize.cpp [ 274s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 277s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 277s] [ 54%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/shapes/initialize.cpp.o [ 277s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/script_interface && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoScriptInterface_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/shapes/initialize.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/script_interface/shapes/initialize.cpp [ 277s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 286s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 286s] [ 54%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/ScriptInterfaceBase.cpp.o [ 286s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/script_interface && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoScriptInterface_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/ScriptInterfaceBase.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/script_interface/ScriptInterfaceBase.cpp [ 286s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 290s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 290s] [ 56%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/ParallelScriptInterface.cpp.o [ 290s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/script_interface && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoScriptInterface_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/ParallelScriptInterface.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/script_interface/ParallelScriptInterface.cpp [ 290s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 310s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 310s] [ 53%] Building CXX object src/script_interface/CMakeFiles/EspressoScriptInterface.dir/observables/initialize.cpp.o [ 310s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/script_interface && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoScriptInterface_EXPORTS -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -o CMakeFiles/EspressoScriptInterface.dir/observables/initialize.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/script_interface/observables/initialize.cpp [ 310s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 313s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 313s] [ 56%] Linking CXX shared library EspressoScriptInterface.so [ 313s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/script_interface && /usr/bin/cmake -E cmake_link_script CMakeFiles/EspressoScriptInterface.dir/link.txt --verbose=1 [ 313s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,EspressoScriptInterface.so -o EspressoScriptInterface.so CMakeFiles/EspressoScriptInterface.dir/accumulators/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/collision_detection/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/constraints/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/cluster_analysis/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/lbboundaries/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/virtual_sites/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/observables/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/pair_criteria/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/mpiio/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/ScriptInterfaceBase.cpp.o CMakeFiles/EspressoScriptInterface.dir/shapes/initialize.cpp.o CMakeFiles/EspressoScriptInterface.dir/ParallelScriptInterface.cpp.o ../core/shapes/Shapes.so ../core/cluster_analysis/core_cluster_analysis.so ../core/io/mpiio/mpiio.so ../core/io/reader/pdbreader.so ../core/EspressoCore.so ../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../pdbparser/pdbparser.so [ 313s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 313s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 313s] [ 56%] Built target EspressoScriptInterface [ 313s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 313s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build.make src/python/espressomd/CMakeFiles/espressomd_polymer.dir/depend [ 313s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/depend [ 313s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build.make src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/depend [ 313s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_system.dir/build.make src/python/espressomd/CMakeFiles/espressomd_system.dir/depend [ 313s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/depend [ 313s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build.make src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/depend [ 313s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_globals.dir/build.make src/python/espressomd/CMakeFiles/espressomd_globals.dir/depend [ 313s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 313s] [ 56%] Generating myconfig.pxi [ 313s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && ./gen_pxiconfig > /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/myconfig.pxi [ 313s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 313s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build.make src/python/espressomd/CMakeFiles/espressomd_diamond.dir/depend [ 313s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 313s] [ 58%] Generating myconfig.pxi [ 313s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && ./gen_pxiconfig > /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/myconfig.pxi [ 313s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 313s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 313s] [ 58%] Generating myconfig.pxi [ 313s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && ./gen_pxiconfig > /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/myconfig.pxi [ 313s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 313s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 313s] [ 56%] Generating myconfig.pxi [ 313s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && ./gen_pxiconfig > /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/myconfig.pxi [ 313s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 313s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 313s] [ 59%] Generating myconfig.pxi [ 313s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && ./gen_pxiconfig > /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/myconfig.pxi [ 313s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 317s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 317s] [ 59%] Generating scafacos.cpp [ 317s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/scafacos.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/scafacos.cpp [ 317s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 317s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 317s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/DependInfo.cmake [ 317s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/depend.internal". [ 317s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/depend.internal". [ 317s] Scanning dependencies of target espressomd_scafacos [ 317s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 317s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build.make src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build [ 318s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 318s] [ 59%] Generating globals.cpp [ 318s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/globals.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/globals.cpp [ 318s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 318s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 318s] [ 59%] Generating diamond.cpp [ 318s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/diamond.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/diamond.cpp [ 318s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 318s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 318s] [ 59%] Generating polymer.cpp [ 318s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/polymer.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/polymer.cpp [ 318s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 318s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 318s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_globals.dir/DependInfo.cmake [ 318s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_globals.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_globals.dir/depend.internal". [ 318s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_globals.dir/depend.internal". [ 318s] Scanning dependencies of target espressomd_globals [ 318s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 318s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_globals.dir/build.make src/python/espressomd/CMakeFiles/espressomd_globals.dir/build [ 318s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 318s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/DependInfo.cmake [ 318s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/depend.internal". [ 318s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/depend.internal". [ 318s] Scanning dependencies of target espressomd_diamond [ 318s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 318s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build.make src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build [ 318s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 318s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/DependInfo.cmake [ 318s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/depend.internal". [ 318s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/depend.internal". [ 318s] Scanning dependencies of target espressomd_polymer [ 318s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 318s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build.make src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build [ 319s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 319s] [ 59%] Generating thermostat.cpp [ 319s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/thermostat.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/thermostat.cpp [ 319s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 319s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 319s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/DependInfo.cmake [ 319s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/depend.internal". [ 319s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/depend.internal". [ 319s] Scanning dependencies of target espressomd_thermostat [ 319s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 319s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build.make src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build [ 319s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 319s] [ 59%] Generating visualization_mayavi.cpp [ 319s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/visualization_mayavi.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/visualization_mayavi.cpp [ 319s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 319s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 319s] [ 59%] Generating system.cpp [ 319s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/system.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/system.cpp [ 319s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 319s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 319s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/DependInfo.cmake [ 319s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/depend.internal". [ 319s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/depend.internal". [ 319s] Scanning dependencies of target espressomd_visualization_mayavi [ 319s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 319s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build [ 319s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 319s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_system.dir/DependInfo.cmake [ 319s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_system.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_system.dir/depend.internal". [ 319s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_system.dir/depend.internal". [ 319s] Scanning dependencies of target espressomd_system [ 319s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 319s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_system.dir/build.make src/python/espressomd/CMakeFiles/espressomd_system.dir/build [ 325s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 325s] [ 59%] Generating visualization_opengl.cpp [ 325s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/visualization_opengl.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/visualization_opengl.cpp [ 325s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 325s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 325s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/DependInfo.cmake [ 325s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/depend.internal". [ 325s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/depend.internal". [ 325s] Scanning dependencies of target espressomd_visualization_opengl [ 325s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 325s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build [ 329s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 329s] [ 59%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/scafacos.cpp.o [ 329s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_scafacos_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_scafacos.dir/scafacos.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/scafacos.cpp [ 329s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 330s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 330s] [ 62%] Linking CXX shared library scafacos.so [ 330s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_scafacos.dir/link.txt --verbose=1 [ 330s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,scafacos.so -o scafacos.so CMakeFiles/espressomd_scafacos.dir/scafacos.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 330s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 330s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 330s] [ 62%] Built target espressomd_scafacos [ 330s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 330s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd__init.dir/build.make src/python/espressomd/CMakeFiles/espressomd__init.dir/depend [ 331s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 331s] [ 62%] Generating _init.cpp [ 331s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/_init.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/_init.cpp [ 331s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 331s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 331s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd__init.dir/DependInfo.cmake [ 331s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd__init.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd__init.dir/depend.internal". [ 331s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd__init.dir/depend.internal". [ 331s] Scanning dependencies of target espressomd__init [ 331s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 331s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd__init.dir/build.make src/python/espressomd/CMakeFiles/espressomd__init.dir/build [ 337s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 337s] [ 59%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_globals.dir/globals.cpp.o [ 337s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_globals_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface 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-fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_polymer.dir/polymer.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/polymer.cpp [ 339s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 340s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 340s] [ 67%] Linking CXX shared library polymer.so [ 340s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_polymer.dir/link.txt --verbose=1 [ 340s] /usr/bin/c++ -fPIC 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-I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_diamond.dir/diamond.cpp.o -c 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../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 344s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 344s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 344s] [ 72%] Built target espressomd_diamond [ 344s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 344s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/depend [ 346s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 346s] [ 70%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_profiler.dir/profiler.cpp.o [ 346s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_profiler_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -I/home/abuild/rpmbuild/BUILD/espresso/src/profiler/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_profiler.dir/profiler.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/profiler.cpp [ 346s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 346s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 346s] [ 74%] Linking CXX shared library profiler.so [ 346s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_profiler.dir/link.txt --verbose=1 [ 346s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,profiler.so -o profiler.so CMakeFiles/espressomd_profiler.dir/profiler.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 346s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 346s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 346s] [ 74%] Built target espressomd_profiler [ 346s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 346s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build.make src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/depend [ 346s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 346s] [ 59%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/thermostat.cpp.o [ 346s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_thermostat_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_thermostat.dir/thermostat.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/thermostat.cpp [ 346s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 346s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 346s] [ 72%] Generating electrokinetics.cpp [ 347s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/electrokinetics.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/electrokinetics.cpp [ 347s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 347s] 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[ 347s] Scanning dependencies of target espressomd_electrokinetics [ 347s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 347s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build [ 347s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 347s] [ 75%] Linking CXX shared library thermostat.so [ 347s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_thermostat.dir/link.txt --verbose=1 [ 347s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,thermostat.so -o thermostat.so CMakeFiles/espressomd_thermostat.dir/thermostat.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 347s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 347s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 347s] [ 77%] Built target espressomd_thermostat [ 347s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 347s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build.make src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/depend [ 350s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 350s] [ 77%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/electrokinetics.cpp.o [ 350s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_electrokinetics_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_electrokinetics.dir/electrokinetics.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/electrokinetics.cpp [ 350s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 350s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 350s] [ 77%] Linking CXX shared library electrokinetics.so [ 350s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_electrokinetics.dir/link.txt --verbose=1 [ 350s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,electrokinetics.so -o electrokinetics.so CMakeFiles/espressomd_electrokinetics.dir/electrokinetics.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 350s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 350s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 350s] [ 77%] Built target espressomd_electrokinetics [ 350s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 350s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/depend [ 351s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 351s] [ 77%] Generating reaction_ensemble.cpp [ 351s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/reaction_ensemble.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/reaction_ensemble.cpp [ 351s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 351s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 351s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/DependInfo.cmake [ 351s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/depend.internal". [ 351s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/depend.internal". [ 351s] Scanning dependencies of target espressomd_reaction_ensemble [ 351s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 351s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build.make src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build [ 352s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 352s] [ 59%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/visualization_mayavi.cpp.o [ 352s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_visualization_mayavi_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_visualization_mayavi.dir/visualization_mayavi.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/visualization_mayavi.cpp [ 352s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 352s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 352s] [ 79%] Generating cuda_init.cpp [ 352s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/cuda_init.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/cuda_init.cpp [ 352s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 352s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 352s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/DependInfo.cmake [ 352s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/depend.internal". [ 352s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/depend.internal". [ 352s] Scanning dependencies of target espressomd_cuda_init [ 352s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 352s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build [ 352s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 352s] [ 79%] Linking CXX shared library visualization_mayavi.so [ 352s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_visualization_mayavi.dir/link.txt --verbose=1 [ 352s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,visualization_mayavi.so -o visualization_mayavi.so CMakeFiles/espressomd_visualization_mayavi.dir/visualization_mayavi.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 352s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 352s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 352s] [ 79%] Built target espressomd_visualization_mayavi [ 352s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 352s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build.make src/python/espressomd/CMakeFiles/espressomd_analyze.dir/depend [ 354s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 354s] [ 74%] Generating particle_data.cpp [ 354s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/particle_data.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/particle_data.cpp [ 354s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 354s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 354s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/DependInfo.cmake [ 354s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/depend.internal". [ 354s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/depend.internal". [ 354s] Scanning dependencies of target espressomd_particle_data [ 354s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 354s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build.make src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build [ 358s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 358s] [ 70%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/collision_detection.cpp.o [ 358s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_collision_detection_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_collision_detection.dir/collision_detection.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/collision_detection.cpp [ 358s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 358s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 358s] [ 79%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/cuda_init.cpp.o [ 358s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_cuda_init_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_cuda_init.dir/cuda_init.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/cuda_init.cpp [ 358s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 358s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 358s] [ 80%] Linking CXX shared library collision_detection.so [ 358s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_collision_detection.dir/link.txt --verbose=1 [ 358s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,collision_detection.so -o collision_detection.so CMakeFiles/espressomd_collision_detection.dir/collision_detection.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 358s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 358s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 358s] [ 80%] Built target espressomd_collision_detection [ 358s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 358s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/depend [ 358s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 358s] [ 80%] Linking CXX shared library cuda_init.so [ 358s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_cuda_init.dir/link.txt --verbose=1 [ 358s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,cuda_init.so -o cuda_init.so CMakeFiles/espressomd_cuda_init.dir/cuda_init.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 358s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 358s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 358s] [ 80%] Built target espressomd_cuda_init [ 358s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 358s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_actors.dir/build.make src/python/espressomd/CMakeFiles/espressomd_actors.dir/depend [ 360s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 360s] [ 79%] Generating analyze.cpp [ 360s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/analyze.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/analyze.cpp [ 360s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 360s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 360s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/DependInfo.cmake [ 360s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/depend.internal". [ 360s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/depend.internal". [ 360s] Scanning dependencies of target espressomd_analyze [ 360s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 360s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build.make src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build [ 361s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 361s] [ 80%] Generating actors.cpp [ 361s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/actors.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/actors.cpp [ 361s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 361s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 361s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_actors.dir/DependInfo.cmake [ 361s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_actors.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_actors.dir/depend.internal". [ 361s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_actors.dir/depend.internal". [ 361s] Scanning dependencies of target espressomd_actors [ 361s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 361s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_actors.dir/build.make src/python/espressomd/CMakeFiles/espressomd_actors.dir/build [ 362s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 362s] [ 61%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_system.dir/system.cpp.o [ 362s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_system_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_system.dir/system.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/system.cpp [ 362s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 362s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 362s] [ 82%] Linking CXX shared library system.so [ 362s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_system.dir/link.txt --verbose=1 [ 362s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,system.so -o system.so CMakeFiles/espressomd_system.dir/system.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 362s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 362s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 362s] [ 82%] Built target espressomd_system [ 362s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 362s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build.make src/python/espressomd/CMakeFiles/espressomd_code_info.dir/depend [ 363s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 363s] [ 82%] Generating code_info.pyx [ 363s] cd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd && /usr/bin/python3 gen_code_info.py /home/abuild/rpmbuild/BUILD/espresso/src/config/features.def /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/code_info.pyx [ 363s] Reading definitions from /home/abuild/rpmbuild/BUILD/espresso/src/config/features.def... [ 363s] Done. [ 363s] Writing /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/code_info.pyx... [ 363s] Done. [ 363s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 363s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 363s] [ 80%] Generating cellsystem.cpp [ 363s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/cellsystem.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/cellsystem.cpp [ 363s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 363s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 363s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/DependInfo.cmake [ 363s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/depend.internal". [ 363s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/depend.internal". [ 363s] Scanning dependencies of target espressomd_cellsystem [ 363s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 363s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build [ 364s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 364s] [ 83%] Generating code_info.cpp [ 365s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/code_info.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/code_info.cpp [ 365s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 365s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 365s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/DependInfo.cmake [ 365s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/depend.internal". [ 365s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/depend.internal". [ 365s] Scanning dependencies of target espressomd_code_info [ 365s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 365s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build.make src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build [ 367s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 367s] [ 83%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_code_info.dir/code_info.cpp.o [ 367s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_code_info_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_code_info.dir/code_info.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/code_info.cpp [ 367s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 367s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 367s] [ 83%] Linking CXX shared library code_info.so [ 367s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_code_info.dir/link.txt --verbose=1 [ 367s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,code_info.so -o code_info.so CMakeFiles/espressomd_code_info.dir/code_info.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 367s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 367s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 367s] [ 83%] Built target espressomd_code_info [ 367s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 367s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/depend [ 372s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 372s] [ 83%] Generating electrostatics.cpp [ 372s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/electrostatics.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/electrostatics.cpp [ 372s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 372s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 372s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/DependInfo.cmake [ 372s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/depend.internal". [ 372s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/depend.internal". [ 372s] Scanning dependencies of target espressomd_electrostatics [ 372s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 372s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build [ 373s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 373s] [ 70%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/magnetostatics.cpp.o [ 373s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_magnetostatics_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_magnetostatics.dir/magnetostatics.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/magnetostatics.cpp [ 373s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 373s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 373s] [ 83%] Linking CXX shared library magnetostatics.so [ 373s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_magnetostatics.dir/link.txt --verbose=1 [ 373s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,magnetostatics.so -o magnetostatics.so CMakeFiles/espressomd_magnetostatics.dir/magnetostatics.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 373s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 373s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 373s] [ 83%] Built target espressomd_magnetostatics [ 373s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 373s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build.make src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/depend [ 375s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 375s] [ 82%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_actors.dir/actors.cpp.o [ 375s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_actors_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_actors.dir/actors.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/actors.cpp [ 375s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 375s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 375s] [ 83%] Linking CXX shared library actors.so [ 375s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_actors.dir/link.txt --verbose=1 [ 375s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,actors.so -o actors.so CMakeFiles/espressomd_actors.dir/actors.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 375s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 375s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 375s] [ 83%] Built target espressomd_actors [ 375s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 375s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/depend [ 377s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 377s] [ 83%] Generating script_interface.cpp [ 377s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/script_interface.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/script_interface.cpp [ 377s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 377s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 377s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/DependInfo.cmake [ 377s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/depend.internal". [ 377s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/depend.internal". [ 377s] Scanning dependencies of target espressomd_script_interface [ 377s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 377s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build.make src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build [ 378s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 378s] [ 83%] Generating magnetostatic_extensions.cpp [ 378s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/magnetostatic_extensions.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/magnetostatic_extensions.cpp [ 378s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 378s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 378s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/DependInfo.cmake [ 378s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/depend.internal". [ 378s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/depend.internal". [ 378s] Scanning dependencies of target espressomd_magnetostatic_extensions [ 378s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 378s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build [ 383s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 383s] [ 79%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/reaction_ensemble.cpp.o [ 384s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_reaction_ensemble_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_reaction_ensemble.dir/reaction_ensemble.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/reaction_ensemble.cpp [ 384s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 384s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 384s] [ 83%] Linking CXX shared library reaction_ensemble.so [ 384s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_reaction_ensemble.dir/link.txt --verbose=1 [ 384s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,reaction_ensemble.so -o reaction_ensemble.so CMakeFiles/espressomd_reaction_ensemble.dir/reaction_ensemble.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 384s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 384s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 384s] [ 83%] Built target espressomd_reaction_ensemble [ 384s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 384s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build.make src/python/espressomd/CMakeFiles/espressomd_galilei.dir/depend [ 385s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 385s] [ 83%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/cellsystem.cpp.o [ 385s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_cellsystem_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_cellsystem.dir/cellsystem.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/cellsystem.cpp [ 385s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 386s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 386s] [ 85%] Linking CXX shared library cellsystem.so [ 386s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_cellsystem.dir/link.txt --verbose=1 [ 386s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,cellsystem.so -o cellsystem.so CMakeFiles/espressomd_cellsystem.dir/cellsystem.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 386s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 386s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 386s] [ 85%] Built target espressomd_cellsystem [ 386s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 386s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_version.dir/build.make src/python/espressomd/CMakeFiles/espressomd_version.dir/depend [ 387s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 387s] [ 85%] Generating galilei.cpp [ 387s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/galilei.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/galilei.cpp [ 387s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 387s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 387s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/DependInfo.cmake [ 387s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/depend.internal". [ 387s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/depend.internal". [ 387s] Scanning dependencies of target espressomd_galilei [ 387s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 387s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build.make src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build [ 387s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 387s] [ 87%] Generating version.cpp [ 387s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/version.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/version.cpp [ 387s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 387s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 387s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_version.dir/DependInfo.cmake [ 387s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_version.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_version.dir/depend.internal". [ 387s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_version.dir/depend.internal". [ 387s] Scanning dependencies of target espressomd_version [ 387s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 387s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_version.dir/build.make src/python/espressomd/CMakeFiles/espressomd_version.dir/build [ 389s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 389s] [ 83%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/magnetostatic_extensions.cpp.o [ 389s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_magnetostatic_extensions_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_magnetostatic_extensions.dir/magnetostatic_extensions.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/magnetostatic_extensions.cpp [ 389s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 390s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 390s] [ 87%] Linking CXX shared library magnetostatic_extensions.so [ 390s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_magnetostatic_extensions.dir/link.txt --verbose=1 [ 390s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,magnetostatic_extensions.so -o magnetostatic_extensions.so CMakeFiles/espressomd_magnetostatic_extensions.dir/magnetostatic_extensions.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 390s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 390s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 390s] [ 87%] Built target espressomd_magnetostatic_extensions [ 390s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 390s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build.make src/python/espressomd/CMakeFiles/espressomd_integrate.dir/depend [ 390s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 390s] [ 87%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_version.dir/version.cpp.o [ 390s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_version_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_version.dir/version.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/version.cpp [ 390s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 390s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 390s] [ 87%] Linking CXX shared library version.so [ 390s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_version.dir/link.txt --verbose=1 [ 390s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,version.so -o version.so CMakeFiles/espressomd_version.dir/version.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 390s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 390s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 390s] [ 87%] Built target espressomd_version [ 390s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 390s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization.dir/depend [ 392s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 392s] [ 87%] Generating visualization.cpp [ 392s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/visualization.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/visualization.cpp [ 392s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 392s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 392s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_visualization.dir/DependInfo.cmake [ 392s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_visualization.dir/DependInfo.cmake" is newer than depender 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[ 393s] Scanning dependencies of target espressomd_integrate [ 393s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 393s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build.make src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build [ 396s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 396s] [ 87%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_visualization.dir/visualization.cpp.o [ 396s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_visualization_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_visualization.dir/visualization.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/visualization.cpp [ 396s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 396s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 396s] [ 87%] Linking CXX shared library visualization.so [ 396s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_visualization.dir/link.txt --verbose=1 [ 396s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,visualization.so -o visualization.so CMakeFiles/espressomd_visualization.dir/visualization.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 396s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 396s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 396s] [ 88%] Built target espressomd_visualization [ 396s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 396s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build.make src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/depend [ 396s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 396s] [ 87%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_galilei.dir/galilei.cpp.o [ 396s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_galilei_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_galilei.dir/galilei.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/galilei.cpp [ 396s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 397s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 397s] [ 88%] Linking CXX shared library galilei.so [ 397s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_galilei.dir/link.txt --verbose=1 [ 397s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,galilei.so -o galilei.so CMakeFiles/espressomd_galilei.dir/galilei.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 397s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 397s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 397s] [ 88%] Built target espressomd_galilei [ 397s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 397s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/depend [ 399s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 399s] [ 88%] Generating minimize_energy.cpp [ 399s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/minimize_energy.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/minimize_energy.cpp [ 399s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 399s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 399s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/DependInfo.cmake [ 399s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/depend.internal". 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[ 399s] Scanning dependencies of target espressomd_minimize_energy [ 399s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 399s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build.make src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build [ 400s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 400s] [ 88%] Generating electrostatic_extensions.cpp [ 400s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/electrostatic_extensions.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/electrostatic_extensions.cpp [ 400s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 400s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 400s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/DependInfo.cmake [ 400s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/depend.internal". [ 400s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/depend.internal". [ 400s] Scanning dependencies of target espressomd_electrostatic_extensions [ 400s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 400s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build [ 409s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 409s] [ 87%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_integrate.dir/integrate.cpp.o [ 409s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_integrate_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_integrate.dir/integrate.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/integrate.cpp [ 409s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 409s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 409s] [ 88%] Linking CXX shared library integrate.so [ 409s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_integrate.dir/link.txt --verbose=1 [ 409s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,integrate.so -o integrate.so CMakeFiles/espressomd_integrate.dir/integrate.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 409s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 409s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 409s] [ 90%] Built target espressomd_integrate [ 409s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 409s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_interactions.dir/depend [ 413s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 413s] [ 80%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_analyze.dir/analyze.cpp.o [ 413s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_analyze_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_analyze.dir/analyze.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/analyze.cpp [ 413s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 414s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 414s] [ 88%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/minimize_energy.cpp.o [ 414s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_minimize_energy_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_minimize_energy.dir/minimize_energy.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/minimize_energy.cpp [ 414s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 414s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 414s] [ 91%] Linking CXX shared library analyze.so [ 414s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_analyze.dir/link.txt --verbose=1 [ 414s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,analyze.so -o analyze.so CMakeFiles/espressomd_analyze.dir/analyze.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 414s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 414s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 414s] [ 91%] Built target espressomd_analyze [ 414s] make[1]: Leaving 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-Wl,-soname,minimize_energy.so -o minimize_energy.so CMakeFiles/espressomd_minimize_energy.dir/minimize_energy.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 414s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 414s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 414s] [ 93%] Built target espressomd_minimize_energy [ 414s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 414s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_utils.dir/build.make src/python/espressomd/CMakeFiles/espressomd_utils.dir/depend [ 414s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 414s] [ 80%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/particle_data.cpp.o [ 414s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_particle_data_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_particle_data.dir/particle_data.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/particle_data.cpp [ 414s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 415s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 415s] [ 93%] Linking CXX shared library particle_data.so [ 415s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_particle_data.dir/link.txt --verbose=1 [ 415s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,particle_data.so -o particle_data.so CMakeFiles/espressomd_particle_data.dir/particle_data.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 415s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 415s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 415s] [ 93%] Built target espressomd_particle_data [ 415s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 416s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 416s] [ 83%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/script_interface.cpp.o [ 416s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_script_interface_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_script_interface.dir/script_interface.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/script_interface.cpp [ 416s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 416s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 416s] [ 90%] Generating interactions.cpp [ 416s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/interactions.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/interactions.cpp [ 416s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 416s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 416s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/DependInfo.cmake [ 416s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/depend.internal". [ 416s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/depend.internal". [ 416s] Scanning dependencies of target espressomd_interactions [ 416s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 416s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build [ 416s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 416s] [ 93%] Linking CXX shared library script_interface.so [ 416s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_script_interface.dir/link.txt --verbose=1 [ 417s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,script_interface.so -o script_interface.so CMakeFiles/espressomd_script_interface.dir/script_interface.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 417s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 417s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 417s] [ 96%] Built target espressomd_script_interface [ 417s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 417s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 417s] [ 93%] Generating utils.cpp [ 417s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/utils.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/utils.cpp [ 417s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 417s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 417s] [ 88%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/electrostatic_extensions.cpp.o [ 417s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_electrostatic_extensions_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_electrostatic_extensions.dir/electrostatic_extensions.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/electrostatic_extensions.cpp [ 417s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 417s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 417s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_utils.dir/DependInfo.cmake [ 417s] Dependee 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[ 417s] Scanning dependencies of target espressomd_utils [ 417s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 417s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_utils.dir/build.make src/python/espressomd/CMakeFiles/espressomd_utils.dir/build [ 417s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 417s] [ 91%] Generating lb.cpp [ 417s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python && /usr/bin/cython -3 --cplus --directive embedsignature=True --directive binding=True -I /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd -I /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/lb.pyx -o /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/lb.cpp [ 417s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 417s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 417s] [ 98%] Linking CXX shared library electrostatic_extensions.so [ 417s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_electrostatic_extensions.dir/link.txt --verbose=1 [ 417s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,electrostatic_extensions.so -o electrostatic_extensions.so CMakeFiles/espressomd_electrostatic_extensions.dir/electrostatic_extensions.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 417s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 417s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 417s] [ 98%] Built target espressomd_electrostatic_extensions [ 417s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 417s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 418s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_lb.dir/DependInfo.cmake [ 418s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_lb.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_lb.dir/depend.internal". 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[ 418s] Scanning dependencies of target espressomd_lb [ 418s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 418s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_lb.dir/build.make src/python/espressomd/CMakeFiles/espressomd_lb.dir/build [ 419s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 419s] [ 83%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/electrostatics.cpp.o [ 419s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_electrostatics_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_electrostatics.dir/electrostatics.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/electrostatics.cpp [ 419s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 420s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 420s] [ 98%] Linking CXX shared library electrostatics.so [ 420s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_electrostatics.dir/link.txt --verbose=1 [ 420s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,electrostatics.so -o electrostatics.so CMakeFiles/espressomd_electrostatics.dir/electrostatics.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 420s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 420s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 420s] [ 98%] Built target espressomd_electrostatics [ 420s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 430s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 430s] [ 98%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_utils.dir/utils.cpp.o [ 430s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_utils_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_utils.dir/utils.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/utils.cpp [ 430s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 430s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 430s] [ 98%] Linking CXX shared library utils.so [ 430s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_utils.dir/link.txt --verbose=1 [ 430s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,utils.so -o utils.so CMakeFiles/espressomd_utils.dir/utils.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 430s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 430s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 430s] [ 98%] Built target espressomd_utils [ 430s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 440s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 440s] [ 98%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_lb.dir/lb.cpp.o [ 440s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_lb_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_lb.dir/lb.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/lb.cpp [ 440s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 440s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 440s] [100%] Linking CXX shared library lb.so [ 440s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_lb.dir/link.txt --verbose=1 [ 440s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,lb.so -o lb.so CMakeFiles/espressomd_lb.dir/lb.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 440s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 440s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 440s] [100%] Built target espressomd_lb [ 440s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 523s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 523s] [ 95%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_interactions.dir/interactions.cpp.o [ 523s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_interactions_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_interactions.dir/interactions.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/interactions.cpp [ 523s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 524s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 524s] [100%] Linking CXX shared library interactions.so [ 524s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_interactions.dir/link.txt --verbose=1 [ 524s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,interactions.so -o interactions.so CMakeFiles/espressomd_interactions.dir/interactions.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 524s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 524s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 524s] [100%] Built target espressomd_interactions [ 524s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 556s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 556s] [ 62%] Building CXX object src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/visualization_opengl.cpp.o [ 556s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DR123_USE_MULHILO64_C99 -Despressomd_visualization_opengl_EXPORTS -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/include/python3.7m -isystem /usr/lib/python3.7/site-packages/numpy/core/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -fPIC -pthread -std=c++14 -Wno-pedantic -Wno-cpp -Wno-strict-aliasing -Wno-maybe-uninitialized -Wno-unused-variable -o CMakeFiles/espressomd_visualization_opengl.dir/visualization_opengl.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/visualization_opengl.cpp [ 556s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] [100%] Linking CXX shared library visualization_opengl.so [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/espressomd_visualization_opengl.dir/link.txt --verbose=1 [ 557s] /usr/bin/c++ -fPIC -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -Wl,--as-needed -Wl,-z,now -shared -Wl,-soname,visualization_opengl.so -o visualization_opengl.so CMakeFiles/espressomd_visualization_opengl.dir/visualization_opengl.cpp.o ../../script_interface/EspressoScriptInterface.so ../../core/shapes/Shapes.so ../../core/cluster_analysis/core_cluster_analysis.so ../../core/io/mpiio/mpiio.so ../../core/io/reader/pdbreader.so ../../core/EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] [100%] Built target espressomd_visualization_opengl [ 557s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd.dir/build.make src/python/espressomd/CMakeFiles/espressomd.dir/depend [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd.dir/DependInfo.cmake [ 557s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd.dir/depend.internal". [ 557s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd.dir/depend.internal". [ 557s] Scanning dependencies of target espressomd [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd.dir/build.make src/python/espressomd/CMakeFiles/espressomd.dir/build [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/__cinit__.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//__cinit__.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/__init__.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//__init__.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/accumulators.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//accumulators.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/checkpointing.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//checkpointing.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/cluster_analysis.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//cluster_analysis.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/comfixed.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//comfixed.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/constraints.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//constraints.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/drude_helpers.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//drude_helpers.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/ekboundaries.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//ekboundaries.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/gen_code_info.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//gen_code_info.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/gen_pxiconfig.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//gen_pxiconfig.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/highlander.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//highlander.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/lbboundaries.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//lbboundaries.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/observables.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//observables.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/pair_criteria.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//pair_criteria.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/shapes.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//shapes.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/virtual_sites.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//virtual_sites.py [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/io/__init__.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/io/__init__.py [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] [100%] Built target espressomd [ 557s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] /usr/bin/make -f src/python/CMakeFiles/pypresso.dir/build.make src/python/CMakeFiles/pypresso.dir/depend [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python /home/abuild/rpmbuild/BUILD/espresso/build/src/python/CMakeFiles/pypresso.dir/DependInfo.cmake [ 557s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/CMakeFiles/pypresso.dir/DependInfo.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/CMakeFiles/pypresso.dir/depend.internal". [ 557s] Dependee "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/abuild/rpmbuild/BUILD/espresso/build/src/python/CMakeFiles/pypresso.dir/depend.internal". [ 557s] Scanning dependencies of target pypresso [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] /usr/bin/make -f src/python/CMakeFiles/pypresso.dir/build.make src/python/CMakeFiles/pypresso.dir/build [ 557s] make[2]: Nothing to be done for 'src/python/CMakeFiles/pypresso.dir/build'. [ 557s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] [100%] Built target pypresso [ 557s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] /usr/bin/cmake -E cmake_progress_start /home/abuild/rpmbuild/BUILD/espresso/build/CMakeFiles 0 [ 557s] + exit 0 [ 557s] Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.CzbBQO [ 557s] + umask 022 [ 557s] + cd /home/abuild/rpmbuild/BUILD [ 557s] + cd espresso [ 557s] + DESTDIR=/home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386 [ 557s] + /usr/bin/make install -C build [ 557s] make: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] /usr/bin/cmake -S/home/abuild/rpmbuild/BUILD/espresso -B/home/abuild/rpmbuild/BUILD/espresso/build --check-build-system CMakeFiles/Makefile.cmake 0 [ 557s] /usr/bin/cmake -E cmake_progress_start /home/abuild/rpmbuild/BUILD/espresso/build/CMakeFiles /home/abuild/rpmbuild/BUILD/espresso/build/CMakeFiles/progress.marks [ 557s] /usr/bin/make -f CMakeFiles/Makefile2 all [ 557s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] /usr/bin/make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/depend [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/pdbparser /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser /home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser/CMakeFiles/pdbparser.dir/DependInfo.cmake [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] /usr/bin/make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/build [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] make[2]: Nothing to be done for 'src/pdbparser/CMakeFiles/pdbparser.dir/build'. [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] [ 0%] Built target pdbparser [ 557s] /usr/bin/make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/depend [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/config /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/config /home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/version.dir/DependInfo.cmake [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] /usr/bin/make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/build [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/config && /usr/bin/cmake -DPROJECT_SOURCE_DIR=/home/abuild/rpmbuild/BUILD/espresso -DPROJECT_VERSION=4.1.1 -DGIT_EXECUTABLE=GIT_EXECUTABLE-NOTFOUND -P /home/abuild/rpmbuild/BUILD/espresso/cmake/version.cmake [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] [ 0%] Built target version [ 557s] /usr/bin/make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/depend [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/CMakeFiles/myconfig.dir/DependInfo.cmake [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] /usr/bin/make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/build [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] make[2]: Nothing to be done for 'CMakeFiles/myconfig.dir/build'. [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] [ 0%] Built target myconfig [ 557s] /usr/bin/make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/depend [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/config /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/config /home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/check_myconfig.dir/DependInfo.cmake [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] /usr/bin/make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/build [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/config && /usr/bin/python3 /home/abuild/rpmbuild/BUILD/espresso/src/config/check_myconfig.py /usr/bin/c++ /home/abuild/rpmbuild/BUILD/espresso/src/config/features.def /home/abuild/rpmbuild/BUILD/espresso/build/src/config/myconfig-final.hpp cmake_config.hpp [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] [ 0%] Built target check_myconfig [ 557s] /usr/bin/make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/depend [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/config /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/config /home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/generate_config_features.dir/DependInfo.cmake [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] /usr/bin/make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/build [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] make[2]: Nothing to be done for 'src/config/CMakeFiles/generate_config_features.dir/build'. [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] [ 0%] Built target generate_config_features [ 557s] /usr/bin/make -f src/config/CMakeFiles/EspressoConfig.dir/build.make src/config/CMakeFiles/EspressoConfig.dir/depend [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/config /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/config /home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/EspressoConfig.dir/DependInfo.cmake [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] /usr/bin/make -f src/config/CMakeFiles/EspressoConfig.dir/build.make src/config/CMakeFiles/EspressoConfig.dir/build [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] make[2]: Nothing to be done for 'src/config/CMakeFiles/EspressoConfig.dir/build'. [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] [ 0%] Built target EspressoConfig [ 557s] /usr/bin/make -f src/core/CMakeFiles/EspressoCore.dir/build.make src/core/CMakeFiles/EspressoCore.dir/depend [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core /home/abuild/rpmbuild/BUILD/espresso/build/src/core/CMakeFiles/EspressoCore.dir/DependInfo.cmake [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] /usr/bin/make -f src/core/CMakeFiles/EspressoCore.dir/build.make src/core/CMakeFiles/EspressoCore.dir/build [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] make[2]: Nothing to be done for 'src/core/CMakeFiles/EspressoCore.dir/build'. [ 557s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] [ 45%] Built target EspressoCore [ 557s] /usr/bin/make -f src/core/io/reader/CMakeFiles/pdbreader.dir/build.make src/core/io/reader/CMakeFiles/pdbreader.dir/depend [ 557s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 557s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/io/reader /home/abuild/rpmbuild/BUILD/espresso/build/src/core/io/reader/CMakeFiles/pdbreader.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/core/io/reader/CMakeFiles/pdbreader.dir/build.make src/core/io/reader/CMakeFiles/pdbreader.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/core/io/reader/CMakeFiles/pdbreader.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 46%] Built target pdbreader [ 558s] /usr/bin/make -f src/core/io/mpiio/CMakeFiles/mpiio.dir/build.make src/core/io/mpiio/CMakeFiles/mpiio.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/io/mpiio /home/abuild/rpmbuild/BUILD/espresso/build/src/core/io/mpiio/CMakeFiles/mpiio.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/core/io/mpiio/CMakeFiles/mpiio.dir/build.make src/core/io/mpiio/CMakeFiles/mpiio.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/core/io/mpiio/CMakeFiles/mpiio.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 46%] Built target mpiio [ 558s] /usr/bin/make -f src/core/shapes/CMakeFiles/Shapes.dir/build.make src/core/shapes/CMakeFiles/Shapes.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/shapes /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/shapes /home/abuild/rpmbuild/BUILD/espresso/build/src/core/shapes/CMakeFiles/Shapes.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/core/shapes/CMakeFiles/Shapes.dir/build.make src/core/shapes/CMakeFiles/Shapes.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/core/shapes/CMakeFiles/Shapes.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 50%] Built target Shapes [ 558s] /usr/bin/make -f src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build.make src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/cluster_analysis /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/cluster_analysis /home/abuild/rpmbuild/BUILD/espresso/build/src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build.make src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 50%] Built target core_cluster_analysis [ 558s] /usr/bin/make -f src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build.make src/script_interface/CMakeFiles/EspressoScriptInterface.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/script_interface /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/script_interface /home/abuild/rpmbuild/BUILD/espresso/build/src/script_interface/CMakeFiles/EspressoScriptInterface.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build.make src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 54%] Built target EspressoScriptInterface [ 558s] /usr/bin/make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/object_in_fluid /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/object_in_fluid/__init__.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid//__init__.py [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/object_in_fluid/oif_classes.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid//oif_classes.py [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/object_in_fluid/oif_utils.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/object_in_fluid//oif_utils.py [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 54%] Built target object_in_fluid [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 56%] Built target gen_pxiconfig [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build.make src/python/espressomd/CMakeFiles/espressomd_polymer.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_polymer.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build.make src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_polymer.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 58%] Built target espressomd_polymer [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_visualization_opengl.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 59%] Built target espressomd_visualization_opengl [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build.make src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build.make src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_thermostat.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 61%] Built target espressomd_thermostat [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_system.dir/build.make src/python/espressomd/CMakeFiles/espressomd_system.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_system.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_system.dir/build.make src/python/espressomd/CMakeFiles/espressomd_system.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_system.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 62%] Built target espressomd_system [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_visualization_mayavi.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 64%] Built target espressomd_visualization_mayavi [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build.make src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build.make src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_scafacos.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 66%] Built target espressomd_scafacos [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_globals.dir/build.make src/python/espressomd/CMakeFiles/espressomd_globals.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_globals.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_globals.dir/build.make src/python/espressomd/CMakeFiles/espressomd_globals.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_globals.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 67%] Built target espressomd_globals [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build.make src/python/espressomd/CMakeFiles/espressomd_diamond.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_diamond.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build.make src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_diamond.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 69%] Built target espressomd_diamond [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd__init.dir/build.make src/python/espressomd/CMakeFiles/espressomd__init.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd__init.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd__init.dir/build.make src/python/espressomd/CMakeFiles/espressomd__init.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd__init.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 70%] Built target espressomd__init [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_magnetostatics.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 72%] Built target espressomd_magnetostatics [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build.make src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build.make src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_collision_detection.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 74%] Built target espressomd_collision_detection [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build.make src/python/espressomd/CMakeFiles/espressomd_profiler.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_profiler.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build.make src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_profiler.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 75%] Built target espressomd_profiler [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_electrokinetics.dir/build'. [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] [ 77%] Built target espressomd_electrokinetics [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build.make src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/depend [ 558s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/DependInfo.cmake [ 558s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 558s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build.make src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_particle_data.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 79%] Built target espressomd_particle_data [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build.make src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build.make src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_reaction_ensemble.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 79%] Built target espressomd_reaction_ensemble [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_cuda_init.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 80%] Built target espressomd_cuda_init [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build.make src/python/espressomd/CMakeFiles/espressomd_analyze.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_analyze.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build.make src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_analyze.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 82%] Built target espressomd_analyze [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build.make src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_cellsystem.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 82%] Built target espressomd_cellsystem [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_actors.dir/build.make src/python/espressomd/CMakeFiles/espressomd_actors.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_actors.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_actors.dir/build.make src/python/espressomd/CMakeFiles/espressomd_actors.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_actors.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 83%] Built target espressomd_actors [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build.make src/python/espressomd/CMakeFiles/espressomd_code_info.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_code_info.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build.make src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_code_info.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 85%] Built target espressomd_code_info [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_electrostatics.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 85%] Built target espressomd_electrostatics [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build.make src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build.make src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_script_interface.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 87%] Built target espressomd_script_interface [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_magnetostatic_extensions.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 87%] Built target espressomd_magnetostatic_extensions [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build.make src/python/espressomd/CMakeFiles/espressomd_galilei.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_galilei.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build.make src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_galilei.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 88%] Built target espressomd_galilei [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_version.dir/build.make src/python/espressomd/CMakeFiles/espressomd_version.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_version.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_version.dir/build.make src/python/espressomd/CMakeFiles/espressomd_version.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_version.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 90%] Built target espressomd_version [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build.make src/python/espressomd/CMakeFiles/espressomd_integrate.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_integrate.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build.make src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_integrate.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 91%] Built target espressomd_integrate [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_visualization.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build.make src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_visualization.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 93%] Built target espressomd_visualization [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build.make src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build.make src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_minimize_energy.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 95%] Built target espressomd_minimize_energy [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_electrostatic_extensions.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 96%] Built target espressomd_electrostatic_extensions [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_interactions.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_interactions.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build.make src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_interactions.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [ 98%] Built target espressomd_interactions [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_lb.dir/build.make src/python/espressomd/CMakeFiles/espressomd_lb.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_lb.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_lb.dir/build.make src/python/espressomd/CMakeFiles/espressomd_lb.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_lb.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [100%] Built target espressomd_lb [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_utils.dir/build.make src/python/espressomd/CMakeFiles/espressomd_utils.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd_utils.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd_utils.dir/build.make src/python/espressomd/CMakeFiles/espressomd_utils.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] make[2]: Nothing to be done for 'src/python/espressomd/CMakeFiles/espressomd_utils.dir/build'. [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] [100%] Built target espressomd_utils [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd.dir/build.make src/python/espressomd/CMakeFiles/espressomd.dir/depend [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/CMakeFiles/espressomd.dir/DependInfo.cmake [ 559s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] /usr/bin/make -f src/python/espressomd/CMakeFiles/espressomd.dir/build.make src/python/espressomd/CMakeFiles/espressomd.dir/build [ 559s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/__cinit__.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//__cinit__.py [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/__init__.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//__init__.py [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/accumulators.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//accumulators.py [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/checkpointing.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//checkpointing.py [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/cluster_analysis.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//cluster_analysis.py [ 559s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/comfixed.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//comfixed.py [ 560s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/constraints.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//constraints.py [ 560s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/drude_helpers.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//drude_helpers.py [ 560s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/ekboundaries.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//ekboundaries.py [ 560s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/gen_code_info.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//gen_code_info.py [ 560s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/gen_pxiconfig.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//gen_pxiconfig.py [ 560s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/highlander.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//highlander.py [ 560s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/lbboundaries.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//lbboundaries.py [ 560s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/observables.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//observables.py [ 560s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/pair_criteria.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//pair_criteria.py [ 560s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/shapes.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//shapes.py [ 560s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/virtual_sites.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd//virtual_sites.py [ 560s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd && /usr/bin/cmake -E copy /home/abuild/rpmbuild/BUILD/espresso/src/python/espressomd/io/__init__.py /home/abuild/rpmbuild/BUILD/espresso/build/src/python/espressomd/io/__init__.py [ 560s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 560s] [100%] Built target espressomd [ 560s] /usr/bin/make -f src/python/CMakeFiles/pypresso.dir/build.make src/python/CMakeFiles/pypresso.dir/depend [ 560s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 560s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/python /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/python /home/abuild/rpmbuild/BUILD/espresso/build/src/python/CMakeFiles/pypresso.dir/DependInfo.cmake [ 560s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 560s] /usr/bin/make -f src/python/CMakeFiles/pypresso.dir/build.make src/python/CMakeFiles/pypresso.dir/build [ 560s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 560s] make[2]: Nothing to be done for 'src/python/CMakeFiles/pypresso.dir/build'. [ 560s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 560s] [100%] Built target pypresso [ 560s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 560s] /usr/bin/cmake -E cmake_progress_start /home/abuild/rpmbuild/BUILD/espresso/build/CMakeFiles 0 [ 560s] /usr/bin/make -f CMakeFiles/Makefile2 preinstall [ 560s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 560s] make[1]: Nothing to be done for 'preinstall'. [ 560s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 560s] Install the project... [ 560s] /usr/bin/cmake -P cmake_install.cmake [ 560s] -- Install configuration: "RelWithDebInfo" [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/EspressoCore.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/pdbreader.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/mpiio.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/Shapes.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/core_cluster_analysis.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/EspressoConfig.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/pdbparser.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/EspressoScriptInterface.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/_init.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/actors.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/analyze.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/cellsystem.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/collision_detection.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/cuda_init.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/diamond.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/electrokinetics.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/electrostatic_extensions.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/electrostatics.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/galilei.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/globals.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/integrate.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/interactions.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/lb.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/magnetostatic_extensions.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/magnetostatics.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/minimize_energy.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/particle_data.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/polymer.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/profiler.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/reaction_ensemble.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/scafacos.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/script_interface.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/system.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/thermostat.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/utils.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/version.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/visualization.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/visualization_mayavi.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/visualization_opengl.so [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/code_info.so [ 560s] -- Up-to-date: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/__cinit__.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/lbboundaries.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/gen_code_info.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/MDA_ESP [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/MDA_ESP/__init__.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/ekboundaries.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/pair_criteria.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/highlander.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/accumulators.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/virtual_sites.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/constraints.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/gen_pxiconfig.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/io [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/io/writer [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/io/writer/h5md.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/io/writer/__init__.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/io/writer/vtf.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/io/mpiio.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/io/__init__.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/comfixed.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/checkpointing.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/__init__.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/observables.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/drude_helpers.py [ 560s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/cluster_analysis.py [ 561s] -- Installing: /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/python3.7/site-packages/espressomd/shapes.py [ 561s] make: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 561s] + find /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr -name '*.so' -exec chmod +x '{}' ';' [ 561s] + find /home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr -name gen_pxiconfig -exec chmod +x '{}' ';' [ 561s] + rm -f '/home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386/usr/lib/lib*.so' [ 561s] + /usr/lib/rpm/brp-compress [ 561s] + /usr/lib/rpm/brp-suse [ 561s] calling /usr/lib/rpm/brp-suse.d/brp-05-permissions [ 561s] setting / to root:root 0755. (wrong owner/group abuild:abuild) [ 561s] setting /usr/ to root:root 0755. (wrong owner/group abuild:abuild) [ 561s] calling /usr/lib/rpm/brp-suse.d/brp-15-strip-debug [ 562s] calling /usr/lib/rpm/brp-suse.d/brp-25-symlink [ 562s] calling /usr/lib/rpm/brp-suse.d/brp-30-desktop [ 562s] WARNING: '/usr/lib/rpm/brp-desktop.data/suse-screensavers.menu' does not exist [ 562s] WARNING: '/usr/lib/rpm/brp-desktop.data/applications-kmenuedit.menu' does not exist [ 562s] WARNING: '/usr/lib/rpm/brp-desktop.data/custom.menu' does not exist [ 562s] calling /usr/lib/rpm/brp-suse.d/brp-40-rootfs [ 562s] calling /usr/lib/rpm/brp-suse.d/brp-45-tcl [ 562s] calling /usr/lib/rpm/brp-suse.d/brp-75-ar [ 562s] Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.awmz2R [ 562s] + umask 022 [ 562s] + cd /home/abuild/rpmbuild/BUILD [ 562s] + cd espresso [ 562s] + LD_LIBRARY_PATH=/home/abuild/rpmbuild/BUILDROOT/python3-espressomd-4.1.1-15.1.i386//usr/lib/python3.7/site-packages/espressomd::/usr/lib/mpi/gcc/openmpi2/lib [ 562s] + make -C build check CTEST_OUTPUT_ON_FAILURE=1 [ 562s] make: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 562s] /usr/bin/cmake -S/home/abuild/rpmbuild/BUILD/espresso -B/home/abuild/rpmbuild/BUILD/espresso/build --check-build-system CMakeFiles/Makefile.cmake 0 [ 563s] make -f CMakeFiles/Makefile2 check [ 563s] make[1]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] /usr/bin/cmake -S/home/abuild/rpmbuild/BUILD/espresso -B/home/abuild/rpmbuild/BUILD/espresso/build --check-build-system CMakeFiles/Makefile.cmake 0 [ 563s] /usr/bin/cmake -E cmake_progress_start /home/abuild/rpmbuild/BUILD/espresso/build/CMakeFiles 91 [ 563s] make -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all [ 563s] make[2]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/depend [ 563s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/pdbparser /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser /home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser/CMakeFiles/pdbparser.dir/DependInfo.cmake [ 563s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] make -f src/pdbparser/CMakeFiles/pdbparser.dir/build.make src/pdbparser/CMakeFiles/pdbparser.dir/build [ 563s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] make[3]: Nothing to be done for 'src/pdbparser/CMakeFiles/pdbparser.dir/build'. [ 563s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] [ 0%] Built target pdbparser [ 563s] make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/depend [ 563s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/config /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/config /home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/version.dir/DependInfo.cmake [ 563s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/build [ 563s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/config && /usr/bin/cmake -DPROJECT_SOURCE_DIR=/home/abuild/rpmbuild/BUILD/espresso -DPROJECT_VERSION=4.1.1 -DGIT_EXECUTABLE=GIT_EXECUTABLE-NOTFOUND -P /home/abuild/rpmbuild/BUILD/espresso/cmake/version.cmake [ 563s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] [ 0%] Built target version [ 563s] make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/depend [ 563s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/CMakeFiles/myconfig.dir/DependInfo.cmake [ 563s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/build [ 563s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] make[3]: Nothing to be done for 'CMakeFiles/myconfig.dir/build'. [ 563s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] [ 0%] Built target myconfig [ 563s] make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/depend [ 563s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/config /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/config /home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/check_myconfig.dir/DependInfo.cmake [ 563s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/build [ 563s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/config && /usr/bin/python3 /home/abuild/rpmbuild/BUILD/espresso/src/config/check_myconfig.py /usr/bin/c++ /home/abuild/rpmbuild/BUILD/espresso/src/config/features.def /home/abuild/rpmbuild/BUILD/espresso/build/src/config/myconfig-final.hpp cmake_config.hpp [ 563s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] [ 0%] Built target check_myconfig [ 563s] make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/depend [ 563s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/config /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/config /home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/generate_config_features.dir/DependInfo.cmake [ 563s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/build [ 563s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] make[3]: Nothing to be done for 'src/config/CMakeFiles/generate_config_features.dir/build'. [ 563s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] [ 0%] Built target generate_config_features [ 563s] make -f src/config/CMakeFiles/EspressoConfig.dir/build.make src/config/CMakeFiles/EspressoConfig.dir/depend [ 563s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/config /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/config /home/abuild/rpmbuild/BUILD/espresso/build/src/config/CMakeFiles/EspressoConfig.dir/DependInfo.cmake [ 563s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] make -f src/config/CMakeFiles/EspressoConfig.dir/build.make src/config/CMakeFiles/EspressoConfig.dir/build [ 563s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] make[3]: Nothing to be done for 'src/config/CMakeFiles/EspressoConfig.dir/build'. [ 563s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] [ 0%] Built target EspressoConfig [ 563s] make -f src/pdbparser/unit_tests/CMakeFiles/PdbParser_test.dir/build.make src/pdbparser/unit_tests/CMakeFiles/PdbParser_test.dir/depend [ 563s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser/unit_tests/CMakeFiles/PdbParser_test.dir/DependInfo.cmake [ 563s] Scanning dependencies of target PdbParser_test [ 563s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] make -f src/pdbparser/unit_tests/CMakeFiles/PdbParser_test.dir/build.make src/pdbparser/unit_tests/CMakeFiles/PdbParser_test.dir/build [ 563s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 563s] [ 0%] Building CXX object src/pdbparser/unit_tests/CMakeFiles/PdbParser_test.dir/PdbParser_test.cpp.o [ 563s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser/unit_tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/PdbParser_test.dir/PdbParser_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/unit_tests/PdbParser_test.cpp [ 569s] [ 0%] Linking CXX executable PdbParser_test [ 569s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/PdbParser_test.dir/link.txt --verbose=1 [ 569s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/PdbParser_test.dir/PdbParser_test.cpp.o -o PdbParser_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../pdbparser.so ../../config/EspressoConfig.so [ 569s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] [ 0%] Built target PdbParser_test [ 569s] make -f src/core/CMakeFiles/EspressoCore.dir/build.make src/core/CMakeFiles/EspressoCore.dir/depend [ 569s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core /home/abuild/rpmbuild/BUILD/espresso/build/src/core/CMakeFiles/EspressoCore.dir/DependInfo.cmake [ 569s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] make -f src/core/CMakeFiles/EspressoCore.dir/build.make src/core/CMakeFiles/EspressoCore.dir/build [ 569s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] make[3]: Nothing to be done for 'src/core/CMakeFiles/EspressoCore.dir/build'. [ 569s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] [ 30%] Built target EspressoCore [ 569s] make -f src/core/io/reader/CMakeFiles/pdbreader.dir/build.make src/core/io/reader/CMakeFiles/pdbreader.dir/depend [ 569s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/io/reader /home/abuild/rpmbuild/BUILD/espresso/build/src/core/io/reader/CMakeFiles/pdbreader.dir/DependInfo.cmake [ 569s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] make -f src/core/io/reader/CMakeFiles/pdbreader.dir/build.make src/core/io/reader/CMakeFiles/pdbreader.dir/build [ 569s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] make[3]: Nothing to be done for 'src/core/io/reader/CMakeFiles/pdbreader.dir/build'. [ 569s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] [ 31%] Built target pdbreader [ 569s] make -f src/core/io/mpiio/CMakeFiles/mpiio.dir/build.make src/core/io/mpiio/CMakeFiles/mpiio.dir/depend [ 569s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/io/mpiio /home/abuild/rpmbuild/BUILD/espresso/build/src/core/io/mpiio/CMakeFiles/mpiio.dir/DependInfo.cmake [ 569s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] make -f src/core/io/mpiio/CMakeFiles/mpiio.dir/build.make src/core/io/mpiio/CMakeFiles/mpiio.dir/build [ 569s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] make[3]: Nothing to be done for 'src/core/io/mpiio/CMakeFiles/mpiio.dir/build'. [ 569s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] [ 31%] Built target mpiio [ 569s] make -f src/core/shapes/CMakeFiles/Shapes.dir/build.make src/core/shapes/CMakeFiles/Shapes.dir/depend [ 569s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/shapes /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/shapes /home/abuild/rpmbuild/BUILD/espresso/build/src/core/shapes/CMakeFiles/Shapes.dir/DependInfo.cmake [ 569s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] make -f src/core/shapes/CMakeFiles/Shapes.dir/build.make src/core/shapes/CMakeFiles/Shapes.dir/build [ 569s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 569s] make[3]: Nothing to be done for 'src/core/shapes/CMakeFiles/Shapes.dir/build'. [ 569s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 570s] [ 34%] Built target Shapes [ 570s] make -f src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build.make src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/depend [ 570s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 570s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/cluster_analysis /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/cluster_analysis /home/abuild/rpmbuild/BUILD/espresso/build/src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/DependInfo.cmake [ 570s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 570s] make -f src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build.make src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build [ 570s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 570s] make[3]: Nothing to be done for 'src/core/cluster_analysis/CMakeFiles/core_cluster_analysis.dir/build'. [ 570s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 570s] [ 34%] Built target core_cluster_analysis [ 570s] make -f src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build.make src/script_interface/CMakeFiles/EspressoScriptInterface.dir/depend [ 570s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 570s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/script_interface /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/script_interface /home/abuild/rpmbuild/BUILD/espresso/build/src/script_interface/CMakeFiles/EspressoScriptInterface.dir/DependInfo.cmake [ 570s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 570s] make -f src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build.make src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build [ 570s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 570s] make[3]: Nothing to be done for 'src/script_interface/CMakeFiles/EspressoScriptInterface.dir/build'. [ 570s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 570s] [ 37%] Built target EspressoScriptInterface [ 570s] make -f src/core/unit_tests/CMakeFiles/ParallelScriptInterface_test.dir/build.make src/core/unit_tests/CMakeFiles/ParallelScriptInterface_test.dir/depend [ 570s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 570s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests/CMakeFiles/ParallelScriptInterface_test.dir/DependInfo.cmake [ 570s] Scanning dependencies of target ParallelScriptInterface_test [ 570s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 570s] make -f src/core/unit_tests/CMakeFiles/ParallelScriptInterface_test.dir/build.make src/core/unit_tests/CMakeFiles/ParallelScriptInterface_test.dir/build [ 570s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 570s] [ 37%] Building CXX object src/core/unit_tests/CMakeFiles/ParallelScriptInterface_test.dir/ParallelScriptInterface_test.cpp.o [ 570s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/ParallelScriptInterface_test.dir/ParallelScriptInterface_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests/ParallelScriptInterface_test.cpp [ 589s] [ 38%] Linking CXX executable ParallelScriptInterface_test [ 589s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ParallelScriptInterface_test.dir/link.txt --verbose=1 [ 589s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now -pthread CMakeFiles/ParallelScriptInterface_test.dir/ParallelScriptInterface_test.cpp.o -o ParallelScriptInterface_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../script_interface/EspressoScriptInterface.so /usr/lib/libboost_mpi.so.1.71.0 ../shapes/Shapes.so ../cluster_analysis/core_cluster_analysis.so ../io/mpiio/mpiio.so ../io/reader/pdbreader.so ../EspressoCore.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../config/EspressoConfig.so /usr/lib/libboost_serialization.so.1.71.0 ../../pdbparser/pdbparser.so [ 590s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 590s] [ 38%] Built target ParallelScriptInterface_test [ 590s] make -f src/core/unit_tests/CMakeFiles/RuntimeError_test.dir/build.make src/core/unit_tests/CMakeFiles/RuntimeError_test.dir/depend [ 590s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 590s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests/CMakeFiles/RuntimeError_test.dir/DependInfo.cmake [ 590s] Scanning dependencies of target RuntimeError_test [ 590s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 590s] make -f src/core/unit_tests/CMakeFiles/RuntimeError_test.dir/build.make src/core/unit_tests/CMakeFiles/RuntimeError_test.dir/build [ 590s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 590s] [ 38%] Building CXX object src/core/unit_tests/CMakeFiles/RuntimeError_test.dir/RuntimeError_test.cpp.o [ 590s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/RuntimeError_test.dir/RuntimeError_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests/RuntimeError_test.cpp [ 598s] [ 39%] Linking CXX executable RuntimeError_test [ 598s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/RuntimeError_test.dir/link.txt --verbose=1 [ 598s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/RuntimeError_test.dir/RuntimeError_test.cpp.o -o RuntimeError_test /usr/lib/libboost_unit_test_framework.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 ../../config/EspressoConfig.so [ 598s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 598s] [ 39%] Built target RuntimeError_test [ 598s] make -f src/core/unit_tests/CMakeFiles/ParticleIterator_test.dir/build.make src/core/unit_tests/CMakeFiles/ParticleIterator_test.dir/depend [ 598s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 598s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests/CMakeFiles/ParticleIterator_test.dir/DependInfo.cmake [ 598s] Scanning dependencies of target ParticleIterator_test [ 598s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 598s] make -f src/core/unit_tests/CMakeFiles/ParticleIterator_test.dir/build.make src/core/unit_tests/CMakeFiles/ParticleIterator_test.dir/build [ 598s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 598s] [ 39%] Building CXX object src/core/unit_tests/CMakeFiles/ParticleIterator_test.dir/ParticleIterator_test.cpp.o [ 598s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/ParticleIterator_test.dir/ParticleIterator_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests/ParticleIterator_test.cpp [ 606s] [ 39%] Linking CXX executable ParticleIterator_test [ 606s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ParticleIterator_test.dir/link.txt --verbose=1 [ 606s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/ParticleIterator_test.dir/ParticleIterator_test.cpp.o -o ParticleIterator_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 606s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 606s] [ 39%] Built target ParticleIterator_test [ 606s] make -f src/core/unit_tests/CMakeFiles/RuntimeErrorCollector_test.dir/build.make src/core/unit_tests/CMakeFiles/RuntimeErrorCollector_test.dir/depend [ 606s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 606s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests/CMakeFiles/RuntimeErrorCollector_test.dir/DependInfo.cmake [ 606s] Scanning dependencies of target RuntimeErrorCollector_test [ 606s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 606s] make -f src/core/unit_tests/CMakeFiles/RuntimeErrorCollector_test.dir/build.make src/core/unit_tests/CMakeFiles/RuntimeErrorCollector_test.dir/build [ 606s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 606s] [ 39%] Building CXX object src/core/unit_tests/CMakeFiles/RuntimeErrorCollector_test.dir/RuntimeErrorCollector_test.cpp.o [ 606s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/RuntimeErrorCollector_test.dir/RuntimeErrorCollector_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests/RuntimeErrorCollector_test.cpp [ 614s] [ 39%] Linking CXX executable RuntimeErrorCollector_test [ 614s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/RuntimeErrorCollector_test.dir/link.txt --verbose=1 [ 614s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now -pthread CMakeFiles/RuntimeErrorCollector_test.dir/RuntimeErrorCollector_test.cpp.o -o RuntimeErrorCollector_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../EspressoCore.so /usr/lib/libboost_mpi.so.1.71.0 ../../config/EspressoConfig.so /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so /usr/lib/libboost_serialization.so.1.71.0 -Wl,-rpath-link,/home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser [ 615s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 615s] [ 39%] Built target RuntimeErrorCollector_test [ 615s] make -f src/core/unit_tests/CMakeFiles/MpiCallbacks_test.dir/build.make src/core/unit_tests/CMakeFiles/MpiCallbacks_test.dir/depend [ 615s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 615s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests/CMakeFiles/MpiCallbacks_test.dir/DependInfo.cmake [ 615s] Scanning dependencies of target MpiCallbacks_test [ 615s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 615s] make -f src/core/unit_tests/CMakeFiles/MpiCallbacks_test.dir/build.make src/core/unit_tests/CMakeFiles/MpiCallbacks_test.dir/build [ 615s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 615s] [ 39%] Building CXX object src/core/unit_tests/CMakeFiles/MpiCallbacks_test.dir/MpiCallbacks_test.cpp.o [ 615s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -isystem /usr/lib/mpi/gcc/openmpi2/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/MpiCallbacks_test.dir/MpiCallbacks_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests/MpiCallbacks_test.cpp [ 630s] [ 39%] Linking CXX executable MpiCallbacks_test [ 630s] cd 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-fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/ScriptInterface_test.dir/ScriptInterface_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests/ScriptInterface_test.cpp [ 646s] [ 39%] Linking CXX executable ScriptInterface_test [ 646s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScriptInterface_test.dir/link.txt --verbose=1 [ 646s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable 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../cluster_analysis/core_cluster_analysis.so ../io/mpiio/mpiio.so ../io/reader/pdbreader.so ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 680s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 680s] [ 41%] Built target AutoParameter_test [ 680s] make -f src/core/unit_tests/CMakeFiles/Wall_test.dir/build.make src/core/unit_tests/CMakeFiles/Wall_test.dir/depend [ 680s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 680s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests 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-fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/Wall_test.dir/Wall_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests/Wall_test.cpp [ 684s] [ 41%] Building CXX object src/core/unit_tests/CMakeFiles/Wall_test.dir/__/shapes/Wall.cpp.o [ 684s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables 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-isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/LocalBox_test.dir/LocalBox_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests/LocalBox_test.cpp [ 716s] [ 43%] Linking CXX executable LocalBox_test [ 716s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/LocalBox_test.dir/link.txt --verbose=1 [ 716s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables 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/home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests/CMakeFiles/Ellipsoid_test.dir/DependInfo.cmake [ 735s] Scanning dependencies of target Ellipsoid_test [ 735s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 735s] make -f src/core/unit_tests/CMakeFiles/Ellipsoid_test.dir/build.make src/core/unit_tests/CMakeFiles/Ellipsoid_test.dir/build [ 735s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 735s] [ 47%] Building CXX object src/core/unit_tests/CMakeFiles/Ellipsoid_test.dir/Ellipsoid_test.cpp.o [ 736s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/Ellipsoid_test.dir/Ellipsoid_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests/Ellipsoid_test.cpp [ 739s] [ 47%] Linking CXX executable Ellipsoid_test [ 739s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Ellipsoid_test.dir/link.txt --verbose=1 [ 739s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now -pthread CMakeFiles/Ellipsoid_test.dir/Ellipsoid_test.cpp.o -o Ellipsoid_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../shapes/Shapes.so ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so -Wl,-rpath-link,/home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser [ 739s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 739s] [ 47%] Built target Ellipsoid_test [ 739s] make -f 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47%] Building CXX object src/core/unit_tests/CMakeFiles/ParticleCache_test.dir/ParticleCache_test.cpp.o [ 740s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -isystem /usr/lib/mpi/gcc/openmpi2/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o 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/usr/lib/libboost_serialization.so.1.71.0 ../../config/EspressoConfig.so /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so [ 758s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 758s] [ 47%] Built target ParticleCache_test [ 758s] make -f src/core/unit_tests/CMakeFiles/Particle_test.dir/build.make src/core/unit_tests/CMakeFiles/Particle_test.dir/depend [ 758s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 758s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests/CMakeFiles/Particle_test.dir/DependInfo.cmake [ 758s] Scanning dependencies of target Particle_test [ 758s] make[3]: Leaving directory 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-I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/get_value.dir/get_value_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests/get_value_test.cpp [ 779s] [ 48%] Linking CXX executable get_value [ 779s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/get_value.dir/link.txt --verbose=1 [ 779s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now -pthread CMakeFiles/get_value.dir/get_value_test.cpp.o -o get_value /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../script_interface/EspressoScriptInterface.so ../shapes/Shapes.so ../cluster_analysis/core_cluster_analysis.so ../io/mpiio/mpiio.so ../io/reader/pdbreader.so ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 780s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 780s] [ 48%] Built target get_value [ 780s] make -f 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-Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/grid_test.dir/grid_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests/grid_test.cpp [ 803s] [ 49%] Linking CXX executable grid_test [ 803s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/grid_test.dir/link.txt --verbose=1 [ 803s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now -pthread CMakeFiles/grid_test.dir/grid_test.cpp.o -o grid_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so -Wl,-rpath-link,/home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser [ 803s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 803s] [ 49%] Built target grid_test [ 803s] make -f src/core/unit_tests/CMakeFiles/AutoParameters_test.dir/build.make src/core/unit_tests/CMakeFiles/AutoParameters_test.dir/depend [ 803s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 803s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests/CMakeFiles/AutoParameters_test.dir/DependInfo.cmake [ 803s] Scanning dependencies of target AutoParameters_test [ 803s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 803s] make -f src/core/unit_tests/CMakeFiles/AutoParameters_test.dir/build.make src/core/unit_tests/CMakeFiles/AutoParameters_test.dir/build [ 803s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 803s] [ 49%] Building CXX object src/core/unit_tests/CMakeFiles/AutoParameters_test.dir/AutoParameters_test.cpp.o [ 803s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/script_interface -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/mpiio -I/home/abuild/rpmbuild/BUILD/espresso/src/core/io/reader -I/home/abuild/rpmbuild/BUILD/espresso/src/pdbparser/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/AutoParameters_test.dir/AutoParameters_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests/AutoParameters_test.cpp [ 816s] [ 49%] Linking CXX executable AutoParameters_test [ 816s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/AutoParameters_test.dir/link.txt --verbose=1 [ 816s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now -pthread CMakeFiles/AutoParameters_test.dir/AutoParameters_test.cpp.o -o AutoParameters_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../script_interface/EspressoScriptInterface.so ../shapes/Shapes.so ../cluster_analysis/core_cluster_analysis.so ../io/mpiio/mpiio.so ../io/reader/pdbreader.so ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so ../../pdbparser/pdbparser.so [ 817s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 817s] [ 49%] Built target AutoParameters_test [ 817s] make -f src/core/unit_tests/CMakeFiles/BoxGeometry_test.dir/build.make src/core/unit_tests/CMakeFiles/BoxGeometry_test.dir/depend [ 817s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 817s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests/CMakeFiles/BoxGeometry_test.dir/DependInfo.cmake [ 817s] Scanning dependencies of target BoxGeometry_test [ 817s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 817s] make -f src/core/unit_tests/CMakeFiles/BoxGeometry_test.dir/build.make src/core/unit_tests/CMakeFiles/BoxGeometry_test.dir/build [ 817s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 817s] [ 49%] Building CXX object src/core/unit_tests/CMakeFiles/BoxGeometry_test.dir/BoxGeometry_test.cpp.o [ 817s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DR123_USE_MULHILO64_C99 -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -isystem /usr/lib/mpi/gcc/openmpi2/include -isystem /home/abuild/rpmbuild/BUILD/espresso/libs/Random123-1.09/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/BoxGeometry_test.dir/BoxGeometry_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests/BoxGeometry_test.cpp [ 821s] [ 50%] Linking CXX executable BoxGeometry_test [ 821s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/core/unit_tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/BoxGeometry_test.dir/link.txt --verbose=1 [ 821s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now -pthread CMakeFiles/BoxGeometry_test.dir/BoxGeometry_test.cpp.o -o BoxGeometry_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../EspressoCore.so ../../config/EspressoConfig.so /usr/lib/libboost_mpi.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so -Wl,-rpath-link,/home/abuild/rpmbuild/BUILD/espresso/build/src/pdbparser [ 821s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 821s] [ 50%] Built target BoxGeometry_test [ 821s] make -f src/utils/tests/CMakeFiles/interpolation.dir/build.make src/utils/tests/CMakeFiles/interpolation.dir/depend [ 821s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 821s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/interpolation.dir/DependInfo.cmake [ 821s] Scanning dependencies of target interpolation [ 821s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 821s] make -f src/utils/tests/CMakeFiles/interpolation.dir/build.make src/utils/tests/CMakeFiles/interpolation.dir/build [ 821s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 821s] [ 50%] Building CXX object src/utils/tests/CMakeFiles/interpolation.dir/interpolation_test.cpp.o [ 821s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/interpolation.dir/interpolation_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/interpolation_test.cpp [ 831s] [ 50%] Linking CXX executable interpolation [ 831s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/interpolation.dir/link.txt --verbose=1 [ 831s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/interpolation.dir/interpolation_test.cpp.o -o interpolation /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 831s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 831s] [ 50%] Built target interpolation [ 831s] make -f src/utils/tests/CMakeFiles/keys_test.dir/build.make src/utils/tests/CMakeFiles/keys_test.dir/depend [ 831s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 831s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/keys_test.dir/DependInfo.cmake [ 831s] Scanning dependencies of target keys_test [ 831s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 831s] make -f src/utils/tests/CMakeFiles/keys_test.dir/build.make src/utils/tests/CMakeFiles/keys_test.dir/build [ 831s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 831s] [ 50%] Building CXX object src/utils/tests/CMakeFiles/keys_test.dir/keys_test.cpp.o [ 831s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/keys_test.dir/keys_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/keys_test.cpp [ 834s] [ 50%] Linking CXX executable keys_test [ 834s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/keys_test.dir/link.txt --verbose=1 [ 834s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/keys_test.dir/keys_test.cpp.o -o keys_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 835s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 835s] [ 50%] Built target keys_test [ 835s] make -f src/utils/tests/CMakeFiles/vec_rotate.dir/build.make src/utils/tests/CMakeFiles/vec_rotate.dir/depend [ 835s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 835s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/vec_rotate.dir/DependInfo.cmake [ 835s] Scanning dependencies of target 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-Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/vec_rotate.dir/vec_rotate_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/vec_rotate_test.cpp [ 838s] [ 50%] Linking CXX executable vec_rotate [ 838s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/vec_rotate.dir/link.txt --verbose=1 [ 838s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/vec_rotate.dir/vec_rotate_test.cpp.o -o vec_rotate /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 838s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 838s] [ 50%] Built target vec_rotate [ 838s] make -f src/utils/tests/CMakeFiles/sinc.dir/build.make src/utils/tests/CMakeFiles/sinc.dir/depend [ 838s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 838s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/sinc.dir/DependInfo.cmake [ 838s] Scanning dependencies of target sinc [ 838s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 838s] make -f src/utils/tests/CMakeFiles/sinc.dir/build.make 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/home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/sinc_test.cpp [ 843s] [ 50%] Linking CXX executable sinc [ 843s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/sinc.dir/link.txt --verbose=1 [ 843s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/sinc.dir/sinc_test.cpp.o -o sinc /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 843s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 843s] [ 50%] Built target sinc [ 843s] make -f src/utils/tests/CMakeFiles/Span_test.dir/build.make src/utils/tests/CMakeFiles/Span_test.dir/depend [ 843s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 843s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/Span_test.dir/DependInfo.cmake [ 843s] Scanning dependencies of target Span_test [ 843s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 843s] make -f src/utils/tests/CMakeFiles/Span_test.dir/build.make src/utils/tests/CMakeFiles/Span_test.dir/build [ 843s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 843s] [ 50%] Building CXX object src/utils/tests/CMakeFiles/Span_test.dir/Span_test.cpp.o [ 843s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/Span_test.dir/Span_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/Span_test.cpp [ 852s] [ 50%] Linking CXX executable Span_test [ 852s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Span_test.dir/link.txt --verbose=1 [ 852s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/Span_test.dir/Span_test.cpp.o -o Span_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 852s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 852s] [ 50%] Built target Span_test [ 852s] make -f src/utils/tests/CMakeFiles/sgn.dir/build.make src/utils/tests/CMakeFiles/sgn.dir/depend [ 852s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 852s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/sgn.dir/DependInfo.cmake [ 852s] Scanning dependencies of target sgn [ 852s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 852s] make -f src/utils/tests/CMakeFiles/sgn.dir/build.make src/utils/tests/CMakeFiles/sgn.dir/build [ 852s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 852s] [ 50%] Building CXX object src/utils/tests/CMakeFiles/sgn.dir/sgn_test.cpp.o [ 852s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/sgn.dir/sgn_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/sgn_test.cpp [ 857s] [ 51%] Linking CXX executable sgn [ 857s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/sgn.dir/link.txt --verbose=1 [ 857s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/sgn.dir/sgn_test.cpp.o -o sgn /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 857s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 857s] [ 51%] Built target sgn [ 857s] make -f src/utils/tests/CMakeFiles/as_const.dir/build.make src/utils/tests/CMakeFiles/as_const.dir/depend [ 857s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 857s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/as_const.dir/DependInfo.cmake [ 857s] Scanning dependencies of target as_const [ 857s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 857s] make -f src/utils/tests/CMakeFiles/as_const.dir/build.make src/utils/tests/CMakeFiles/as_const.dir/build [ 857s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 857s] [ 52%] Building CXX object src/utils/tests/CMakeFiles/as_const.dir/as_const_test.cpp.o [ 857s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/as_const.dir/as_const_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/as_const_test.cpp [ 861s] [ 52%] Linking CXX executable as_const [ 861s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/as_const.dir/link.txt --verbose=1 [ 861s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/as_const.dir/as_const_test.cpp.o -o as_const /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 861s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 861s] [ 52%] Built target as_const [ 861s] make -f src/utils/tests/CMakeFiles/AS_erfc_part.dir/build.make src/utils/tests/CMakeFiles/AS_erfc_part.dir/depend [ 861s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 861s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/AS_erfc_part.dir/DependInfo.cmake [ 861s] Scanning dependencies of target AS_erfc_part [ 861s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 861s] make -f src/utils/tests/CMakeFiles/AS_erfc_part.dir/build.make src/utils/tests/CMakeFiles/AS_erfc_part.dir/build [ 861s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 861s] [ 52%] Building CXX object src/utils/tests/CMakeFiles/AS_erfc_part.dir/AS_erfc_part_test.cpp.o [ 861s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/AS_erfc_part.dir/AS_erfc_part_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/AS_erfc_part_test.cpp [ 864s] [ 52%] Linking CXX executable AS_erfc_part [ 864s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/AS_erfc_part.dir/link.txt --verbose=1 [ 864s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/AS_erfc_part.dir/AS_erfc_part_test.cpp.o -o AS_erfc_part /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 865s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 865s] [ 52%] Built target AS_erfc_part [ 865s] make -f src/utils/tests/CMakeFiles/make_function_test.dir/build.make src/utils/tests/CMakeFiles/make_function_test.dir/depend [ 865s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 865s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/make_function_test.dir/DependInfo.cmake [ 865s] Scanning dependencies of target make_function_test [ 865s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 865s] make -f src/utils/tests/CMakeFiles/make_function_test.dir/build.make src/utils/tests/CMakeFiles/make_function_test.dir/build [ 865s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 865s] [ 53%] Building CXX object src/utils/tests/CMakeFiles/make_function_test.dir/make_function_test.cpp.o [ 865s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/make_function_test.dir/make_function_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/make_function_test.cpp [ 871s] [ 53%] Linking CXX executable make_function_test [ 871s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/make_function_test.dir/link.txt --verbose=1 [ 871s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/make_function_test.dir/make_function_test.cpp.o -o make_function_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 871s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 871s] [ 53%] Built target make_function_test [ 871s] make -f src/utils/tests/CMakeFiles/permute_ifield_test.dir/build.make src/utils/tests/CMakeFiles/permute_ifield_test.dir/depend [ 871s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 871s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/permute_ifield_test.dir/DependInfo.cmake [ 871s] Scanning dependencies of target permute_ifield_test [ 871s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 871s] make -f src/utils/tests/CMakeFiles/permute_ifield_test.dir/build.make src/utils/tests/CMakeFiles/permute_ifield_test.dir/build [ 871s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 871s] [ 53%] Building CXX object src/utils/tests/CMakeFiles/permute_ifield_test.dir/permute_ifield_test.cpp.o [ 871s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/permute_ifield_test.dir/permute_ifield_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/permute_ifield_test.cpp [ 875s] [ 54%] Linking CXX executable permute_ifield_test [ 875s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/permute_ifield_test.dir/link.txt --verbose=1 [ 875s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/permute_ifield_test.dir/permute_ifield_test.cpp.o -o permute_ifield_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 875s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 875s] [ 54%] Built target permute_ifield_test [ 875s] make -f src/utils/tests/CMakeFiles/int_pow.dir/build.make src/utils/tests/CMakeFiles/int_pow.dir/depend [ 875s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 875s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/int_pow.dir/DependInfo.cmake [ 875s] Scanning dependencies of target int_pow [ 875s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 875s] make -f src/utils/tests/CMakeFiles/int_pow.dir/build.make src/utils/tests/CMakeFiles/int_pow.dir/build [ 875s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 875s] [ 56%] Building CXX object src/utils/tests/CMakeFiles/int_pow.dir/int_pow_test.cpp.o [ 875s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/int_pow.dir/int_pow_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/int_pow_test.cpp [ 880s] [ 56%] Linking CXX executable int_pow [ 880s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/int_pow.dir/link.txt --verbose=1 [ 880s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/int_pow.dir/int_pow_test.cpp.o -o int_pow /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 880s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 880s] [ 56%] Built target int_pow [ 880s] make -f src/utils/tests/CMakeFiles/Factory_test.dir/build.make src/utils/tests/CMakeFiles/Factory_test.dir/depend [ 880s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 880s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/Factory_test.dir/DependInfo.cmake [ 880s] Scanning dependencies of target Factory_test [ 880s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 880s] make -f src/utils/tests/CMakeFiles/Factory_test.dir/build.make src/utils/tests/CMakeFiles/Factory_test.dir/build [ 880s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 880s] [ 56%] Building CXX object src/utils/tests/CMakeFiles/Factory_test.dir/Factory_test.cpp.o [ 880s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/Factory_test.dir/Factory_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/Factory_test.cpp [ 885s] [ 56%] Linking CXX executable Factory_test [ 885s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Factory_test.dir/link.txt --verbose=1 [ 885s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/Factory_test.dir/Factory_test.cpp.o -o Factory_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 885s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 885s] [ 56%] Built target Factory_test [ 885s] make -f src/utils/tests/CMakeFiles/SkipIterator_test.dir/build.make src/utils/tests/CMakeFiles/SkipIterator_test.dir/depend [ 885s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 885s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/SkipIterator_test.dir/DependInfo.cmake [ 885s] Scanning dependencies of target SkipIterator_test [ 885s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 885s] make -f src/utils/tests/CMakeFiles/SkipIterator_test.dir/build.make src/utils/tests/CMakeFiles/SkipIterator_test.dir/build [ 885s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 885s] [ 57%] Building CXX object src/utils/tests/CMakeFiles/SkipIterator_test.dir/SkipIterator_test.cpp.o [ 885s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/SkipIterator_test.dir/SkipIterator_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/SkipIterator_test.cpp [ 890s] [ 57%] Linking CXX executable SkipIterator_test [ 890s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/SkipIterator_test.dir/link.txt --verbose=1 [ 890s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/SkipIterator_test.dir/SkipIterator_test.cpp.o -o SkipIterator_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 890s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 890s] [ 57%] Built target SkipIterator_test [ 890s] make -f src/utils/tests/CMakeFiles/tuple_test.dir/build.make src/utils/tests/CMakeFiles/tuple_test.dir/depend [ 890s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 890s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/tuple_test.dir/DependInfo.cmake [ 890s] Scanning dependencies of target tuple_test [ 890s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 890s] make -f src/utils/tests/CMakeFiles/tuple_test.dir/build.make src/utils/tests/CMakeFiles/tuple_test.dir/build [ 890s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 890s] [ 57%] Building CXX object src/utils/tests/CMakeFiles/tuple_test.dir/tuple_test.cpp.o [ 890s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/tuple_test.dir/tuple_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/tuple_test.cpp [ 894s] [ 57%] Linking CXX executable tuple_test [ 894s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/tuple_test.dir/link.txt --verbose=1 [ 894s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/tuple_test.dir/tuple_test.cpp.o -o tuple_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 894s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 894s] [ 57%] Built target tuple_test [ 894s] make -f src/utils/tests/CMakeFiles/NumeratedContainer_test.dir/build.make src/utils/tests/CMakeFiles/NumeratedContainer_test.dir/depend [ 894s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 894s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/NumeratedContainer_test.dir/DependInfo.cmake [ 894s] Scanning dependencies of target NumeratedContainer_test [ 894s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 894s] make -f src/utils/tests/CMakeFiles/NumeratedContainer_test.dir/build.make src/utils/tests/CMakeFiles/NumeratedContainer_test.dir/build [ 894s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 894s] [ 57%] Building CXX object src/utils/tests/CMakeFiles/NumeratedContainer_test.dir/NumeratedContainer_test.cpp.o [ 894s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/NumeratedContainer_test.dir/NumeratedContainer_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/NumeratedContainer_test.cpp [ 900s] [ 57%] Linking CXX executable NumeratedContainer_test [ 900s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/NumeratedContainer_test.dir/link.txt --verbose=1 [ 900s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/NumeratedContainer_test.dir/NumeratedContainer_test.cpp.o -o NumeratedContainer_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 901s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 901s] [ 57%] Built target NumeratedContainer_test [ 901s] make -f src/utils/tests/CMakeFiles/sampling_test.dir/build.make src/utils/tests/CMakeFiles/sampling_test.dir/depend [ 901s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 901s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/sampling_test.dir/DependInfo.cmake [ 901s] Scanning dependencies of target sampling_test [ 901s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 901s] make -f src/utils/tests/CMakeFiles/sampling_test.dir/build.make src/utils/tests/CMakeFiles/sampling_test.dir/build [ 901s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 901s] [ 57%] Building CXX object src/utils/tests/CMakeFiles/sampling_test.dir/sampling_test.cpp.o [ 901s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/sampling_test.dir/sampling_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/sampling_test.cpp [ 907s] [ 57%] Linking CXX executable sampling_test [ 907s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/sampling_test.dir/link.txt --verbose=1 [ 907s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/sampling_test.dir/sampling_test.cpp.o -o sampling_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 907s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 907s] [ 57%] Built target sampling_test [ 907s] make -f src/utils/tests/CMakeFiles/abs_test.dir/build.make src/utils/tests/CMakeFiles/abs_test.dir/depend [ 907s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 907s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/abs_test.dir/DependInfo.cmake [ 907s] Scanning dependencies of target abs_test [ 907s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 907s] make -f src/utils/tests/CMakeFiles/abs_test.dir/build.make src/utils/tests/CMakeFiles/abs_test.dir/build [ 907s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 907s] [ 57%] Building CXX object src/utils/tests/CMakeFiles/abs_test.dir/abs_test.cpp.o [ 907s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/abs_test.dir/abs_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/abs_test.cpp [ 910s] [ 57%] Linking CXX executable abs_test [ 910s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/abs_test.dir/link.txt --verbose=1 [ 910s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/abs_test.dir/abs_test.cpp.o -o abs_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 910s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 910s] [ 57%] Built target abs_test [ 910s] make -f src/utils/tests/CMakeFiles/Cache_test.dir/build.make src/utils/tests/CMakeFiles/Cache_test.dir/depend [ 910s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 910s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/Cache_test.dir/DependInfo.cmake [ 910s] Scanning dependencies of target Cache_test [ 910s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 910s] make -f src/utils/tests/CMakeFiles/Cache_test.dir/build.make src/utils/tests/CMakeFiles/Cache_test.dir/build [ 910s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 910s] [ 57%] Building CXX object src/utils/tests/CMakeFiles/Cache_test.dir/Cache_test.cpp.o [ 910s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/Cache_test.dir/Cache_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/Cache_test.cpp [ 921s] [ 57%] Linking CXX executable Cache_test [ 921s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Cache_test.dir/link.txt --verbose=1 [ 921s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/Cache_test.dir/Cache_test.cpp.o -o Cache_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 921s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 921s] [ 57%] Built target Cache_test [ 921s] make -f src/utils/tests/CMakeFiles/List_test.dir/build.make src/utils/tests/CMakeFiles/List_test.dir/depend [ 921s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 921s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/List_test.dir/DependInfo.cmake [ 921s] 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-Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/List_test.dir/List_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/List_test.cpp [ 931s] [ 58%] Linking CXX executable List_test [ 931s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/List_test.dir/link.txt --verbose=1 [ 931s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/List_test.dir/List_test.cpp.o -o List_test /usr/lib/libboost_unit_test_framework.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 ../../config/EspressoConfig.so [ 932s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 932s] [ 58%] Built target List_test [ 932s] make -f src/utils/tests/CMakeFiles/strcat_alloc.dir/build.make src/utils/tests/CMakeFiles/strcat_alloc.dir/depend [ 932s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 932s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/strcat_alloc.dir/DependInfo.cmake [ 932s] Scanning dependencies of target strcat_alloc [ 932s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 932s] make -f src/utils/tests/CMakeFiles/strcat_alloc.dir/build.make src/utils/tests/CMakeFiles/strcat_alloc.dir/build [ 932s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 932s] [ 58%] Building CXX object src/utils/tests/CMakeFiles/strcat_alloc.dir/strcat_alloc_test.cpp.o [ 932s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/strcat_alloc.dir/strcat_alloc_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/strcat_alloc_test.cpp [ 936s] [ 58%] Linking CXX executable strcat_alloc [ 936s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/strcat_alloc.dir/link.txt --verbose=1 [ 936s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/strcat_alloc.dir/strcat_alloc_test.cpp.o -o strcat_alloc /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 936s] make[3]: Leaving 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'/home/abuild/rpmbuild/BUILD/espresso/build' [ 936s] [ 58%] Building CXX object src/utils/tests/CMakeFiles/accumulator.dir/accumulator.cpp.o [ 936s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/accumulator.dir/accumulator.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/accumulator.cpp [ 940s] [ 58%] Linking CXX executable accumulator [ 940s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/accumulator.dir/link.txt --verbose=1 [ 940s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/accumulator.dir/accumulator.cpp.o -o accumulator /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 940s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 940s] [ 58%] Built target accumulator [ 940s] make -f 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Building CXX object src/utils/tests/CMakeFiles/matrix_vector_product.dir/matrix_vector_product.cpp.o [ 940s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/matrix_vector_product.dir/matrix_vector_product.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/matrix_vector_product.cpp [ 944s] [ 59%] Linking CXX executable matrix_vector_product [ 944s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/matrix_vector_product.dir/link.txt --verbose=1 [ 944s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/matrix_vector_product.dir/matrix_vector_product.cpp.o -o matrix_vector_product /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 944s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 944s] [ 59%] Built target matrix_vector_product [ 944s] make -f 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src/utils/tests/CMakeFiles/ravel_index.dir/index_test.cpp.o [ 944s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/ravel_index.dir/index_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/index_test.cpp [ 949s] [ 59%] Linking CXX executable ravel_index [ 949s] cd 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directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 949s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/Array_test.dir/DependInfo.cmake [ 949s] Scanning dependencies of target Array_test [ 949s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 949s] make -f src/utils/tests/CMakeFiles/Array_test.dir/build.make src/utils/tests/CMakeFiles/Array_test.dir/build [ 949s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 949s] [ 59%] Building CXX object src/utils/tests/CMakeFiles/Array_test.dir/Array_test.cpp.o [ 949s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/Array_test.dir/Array_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/Array_test.cpp [ 959s] [ 59%] Linking CXX executable Array_test [ 959s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Array_test.dir/link.txt --verbose=1 [ 959s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/Array_test.dir/Array_test.cpp.o -o Array_test /usr/lib/libboost_unit_test_framework.so.1.71.0 /usr/lib/libboost_serialization.so.1.71.0 ../../config/EspressoConfig.so [ 959s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 959s] [ 59%] Built target Array_test [ 959s] make -f src/utils/tests/CMakeFiles/for_each_pair_test.dir/build.make src/utils/tests/CMakeFiles/for_each_pair_test.dir/depend [ 959s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 959s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/for_each_pair_test.dir/DependInfo.cmake [ 959s] Scanning dependencies of target for_each_pair_test [ 959s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 959s] make -f src/utils/tests/CMakeFiles/for_each_pair_test.dir/build.make src/utils/tests/CMakeFiles/for_each_pair_test.dir/build [ 959s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 959s] [ 59%] Building CXX object src/utils/tests/CMakeFiles/for_each_pair_test.dir/for_each_pair_test.cpp.o [ 959s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/for_each_pair_test.dir/for_each_pair_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/for_each_pair_test.cpp [ 963s] [ 59%] Linking CXX executable for_each_pair_test [ 963s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/for_each_pair_test.dir/link.txt --verbose=1 [ 963s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/for_each_pair_test.dir/for_each_pair_test.cpp.o -o for_each_pair_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 963s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 963s] [ 59%] Built target for_each_pair_test [ 963s] make -f src/utils/tests/CMakeFiles/tensor_product.dir/build.make src/utils/tests/CMakeFiles/tensor_product.dir/depend [ 963s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 963s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/tensor_product.dir/DependInfo.cmake [ 963s] Scanning dependencies of target tensor_product [ 963s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 963s] make -f src/utils/tests/CMakeFiles/tensor_product.dir/build.make src/utils/tests/CMakeFiles/tensor_product.dir/build [ 963s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 963s] [ 60%] Building CXX object src/utils/tests/CMakeFiles/tensor_product.dir/tensor_product_test.cpp.o [ 963s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/tensor_product.dir/tensor_product_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/tensor_product_test.cpp [ 967s] [ 60%] Linking CXX executable tensor_product [ 967s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/tensor_product.dir/link.txt --verbose=1 [ 967s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/tensor_product.dir/tensor_product_test.cpp.o -o tensor_product /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 968s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 968s] [ 60%] Built target tensor_product [ 968s] make -f src/utils/tests/CMakeFiles/coordinate_transformation_test.dir/build.make src/utils/tests/CMakeFiles/coordinate_transformation_test.dir/depend [ 968s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 968s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/coordinate_transformation_test.dir/DependInfo.cmake [ 968s] Scanning dependencies of target coordinate_transformation_test [ 968s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 968s] make -f src/utils/tests/CMakeFiles/coordinate_transformation_test.dir/build.make src/utils/tests/CMakeFiles/coordinate_transformation_test.dir/build [ 968s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 968s] [ 60%] Building CXX object src/utils/tests/CMakeFiles/coordinate_transformation_test.dir/coordinate_transformation.cpp.o [ 968s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/coordinate_transformation_test.dir/coordinate_transformation.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/coordinate_transformation.cpp [ 974s] [ 61%] Linking CXX executable coordinate_transformation_test [ 974s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/coordinate_transformation_test.dir/link.txt --verbose=1 [ 974s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/coordinate_transformation_test.dir/coordinate_transformation.cpp.o -o coordinate_transformation_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 974s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 974s] [ 61%] Built target coordinate_transformation_test [ 974s] make -f src/utils/tests/CMakeFiles/Vector_test.dir/build.make src/utils/tests/CMakeFiles/Vector_test.dir/depend [ 974s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 974s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/Vector_test.dir/DependInfo.cmake [ 974s] Scanning dependencies of target Vector_test [ 974s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 974s] make -f src/utils/tests/CMakeFiles/Vector_test.dir/build.make src/utils/tests/CMakeFiles/Vector_test.dir/build [ 974s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 974s] [ 61%] Building CXX object src/utils/tests/CMakeFiles/Vector_test.dir/Vector_test.cpp.o [ 974s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/Vector_test.dir/Vector_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/Vector_test.cpp [ 984s] [ 61%] Linking CXX executable Vector_test [ 984s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Vector_test.dir/link.txt --verbose=1 [ 984s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/Vector_test.dir/Vector_test.cpp.o -o Vector_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 985s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 985s] [ 61%] Built target Vector_test [ 985s] make -f src/utils/tests/CMakeFiles/contains_test.dir/build.make src/utils/tests/CMakeFiles/contains_test.dir/depend [ 985s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 985s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/contains_test.dir/DependInfo.cmake [ 985s] Scanning dependencies of target contains_test [ 985s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 985s] make -f src/utils/tests/CMakeFiles/contains_test.dir/build.make src/utils/tests/CMakeFiles/contains_test.dir/build [ 985s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 985s] [ 61%] Building CXX object src/utils/tests/CMakeFiles/contains_test.dir/contains_test.cpp.o [ 985s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/contains_test.dir/contains_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/contains_test.cpp [ 988s] [ 61%] Linking CXX executable contains_test [ 988s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/contains_test.dir/link.txt --verbose=1 [ 988s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/contains_test.dir/contains_test.cpp.o -o contains_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 988s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 988s] [ 61%] Built target contains_test [ 988s] make -f src/utils/tests/CMakeFiles/raster_test.dir/build.make src/utils/tests/CMakeFiles/raster_test.dir/depend [ 988s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 988s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/raster_test.dir/DependInfo.cmake [ 988s] Scanning dependencies of target raster_test [ 988s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 988s] make -f src/utils/tests/CMakeFiles/raster_test.dir/build.make src/utils/tests/CMakeFiles/raster_test.dir/build [ 988s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 988s] [ 61%] Building CXX object src/utils/tests/CMakeFiles/raster_test.dir/raster_test.cpp.o [ 988s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/raster_test.dir/raster_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/raster_test.cpp [ 993s] [ 61%] Linking CXX executable raster_test [ 993s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/raster_test.dir/link.txt --verbose=1 [ 993s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/raster_test.dir/raster_test.cpp.o -o raster_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 993s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 993s] [ 61%] Built target raster_test [ 993s] make -f src/utils/tests/CMakeFiles/interpolation_gradient.dir/build.make src/utils/tests/CMakeFiles/interpolation_gradient.dir/depend [ 993s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 993s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/interpolation_gradient.dir/DependInfo.cmake [ 993s] Scanning dependencies of target interpolation_gradient [ 993s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 993s] make -f src/utils/tests/CMakeFiles/interpolation_gradient.dir/build.make src/utils/tests/CMakeFiles/interpolation_gradient.dir/build [ 993s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 993s] [ 61%] Building CXX object src/utils/tests/CMakeFiles/interpolation_gradient.dir/interpolation_gradient_test.cpp.o [ 993s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/interpolation_gradient.dir/interpolation_gradient_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/interpolation_gradient_test.cpp [ 1002s] [ 62%] Linking CXX executable interpolation_gradient [ 1002s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/interpolation_gradient.dir/link.txt --verbose=1 [ 1003s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/interpolation_gradient.dir/interpolation_gradient_test.cpp.o -o interpolation_gradient /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 1003s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1003s] [ 62%] Built target interpolation_gradient [ 1003s] make -f src/utils/tests/CMakeFiles/sendrecv_test.dir/build.make src/utils/tests/CMakeFiles/sendrecv_test.dir/depend [ 1003s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1003s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/sendrecv_test.dir/DependInfo.cmake [ 1003s] Scanning dependencies of target sendrecv_test [ 1003s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1003s] make -f src/utils/tests/CMakeFiles/sendrecv_test.dir/build.make src/utils/tests/CMakeFiles/sendrecv_test.dir/build [ 1003s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1003s] [ 62%] Building CXX object src/utils/tests/CMakeFiles/sendrecv_test.dir/sendrecv_test.cpp.o [ 1003s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -isystem /usr/lib/mpi/gcc/openmpi2/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/sendrecv_test.dir/sendrecv_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/sendrecv_test.cpp [ 1010s] [ 62%] Linking CXX executable sendrecv_test [ 1010s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/sendrecv_test.dir/link.txt --verbose=1 [ 1010s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now -pthread CMakeFiles/sendrecv_test.dir/sendrecv_test.cpp.o -o sendrecv_test /usr/lib/libboost_unit_test_framework.so.1.71.0 /usr/lib/libboost_mpi.so.1.71.0 ../../config/EspressoConfig.so /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so [ 1010s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1010s] [ 62%] Built target sendrecv_test [ 1010s] make -f src/utils/tests/CMakeFiles/RunningAverage_test.dir/build.make src/utils/tests/CMakeFiles/RunningAverage_test.dir/depend [ 1010s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1010s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/RunningAverage_test.dir/DependInfo.cmake [ 1010s] Scanning dependencies of target RunningAverage_test [ 1010s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1010s] make -f src/utils/tests/CMakeFiles/RunningAverage_test.dir/build.make src/utils/tests/CMakeFiles/RunningAverage_test.dir/build [ 1010s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1010s] [ 62%] Building CXX object src/utils/tests/CMakeFiles/RunningAverage_test.dir/RunningAverage_test.cpp.o [ 1010s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/RunningAverage_test.dir/RunningAverage_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/RunningAverage_test.cpp [ 1015s] [ 63%] Linking CXX executable RunningAverage_test [ 1015s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/RunningAverage_test.dir/link.txt --verbose=1 [ 1015s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/RunningAverage_test.dir/RunningAverage_test.cpp.o -o RunningAverage_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 1015s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1015s] [ 63%] Built target RunningAverage_test [ 1015s] make -f src/utils/tests/CMakeFiles/gatherv_test.dir/build.make src/utils/tests/CMakeFiles/gatherv_test.dir/depend [ 1015s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1015s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/gatherv_test.dir/DependInfo.cmake [ 1015s] Scanning dependencies of target gatherv_test [ 1015s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1015s] make -f src/utils/tests/CMakeFiles/gatherv_test.dir/build.make src/utils/tests/CMakeFiles/gatherv_test.dir/build [ 1015s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1015s] [ 63%] Building CXX object src/utils/tests/CMakeFiles/gatherv_test.dir/gatherv_test.cpp.o [ 1015s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -isystem /usr/lib/mpi/gcc/openmpi2/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/gatherv_test.dir/gatherv_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/gatherv_test.cpp [ 1023s] [ 63%] Linking CXX executable gatherv_test [ 1023s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatherv_test.dir/link.txt --verbose=1 [ 1023s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now -pthread CMakeFiles/gatherv_test.dir/gatherv_test.cpp.o -o gatherv_test /usr/lib/libboost_unit_test_framework.so.1.71.0 /usr/lib/libboost_mpi.so.1.71.0 ../../config/EspressoConfig.so /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so [ 1023s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1023s] [ 63%] Built target gatherv_test [ 1023s] make -f src/utils/tests/CMakeFiles/make_lin_space_test.dir/build.make src/utils/tests/CMakeFiles/make_lin_space_test.dir/depend [ 1023s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1023s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/make_lin_space_test.dir/DependInfo.cmake [ 1023s] Scanning dependencies of target make_lin_space_test [ 1023s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1023s] make -f src/utils/tests/CMakeFiles/make_lin_space_test.dir/build.make src/utils/tests/CMakeFiles/make_lin_space_test.dir/build [ 1023s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1023s] [ 63%] Building CXX object src/utils/tests/CMakeFiles/make_lin_space_test.dir/make_lin_space_test.cpp.o [ 1023s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/make_lin_space_test.dir/make_lin_space_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/make_lin_space_test.cpp [ 1028s] [ 63%] Linking CXX executable make_lin_space_test [ 1028s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/make_lin_space_test.dir/link.txt --verbose=1 [ 1028s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/make_lin_space_test.dir/make_lin_space_test.cpp.o -o make_lin_space_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 1028s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1028s] [ 63%] Built target make_lin_space_test [ 1028s] make -f src/utils/tests/CMakeFiles/uniform_test.dir/build.make src/utils/tests/CMakeFiles/uniform_test.dir/depend [ 1028s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1028s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/uniform_test.dir/DependInfo.cmake [ 1028s] Scanning dependencies of target uniform_test [ 1028s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1028s] make -f src/utils/tests/CMakeFiles/uniform_test.dir/build.make src/utils/tests/CMakeFiles/uniform_test.dir/build [ 1028s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1029s] [ 63%] Building CXX object src/utils/tests/CMakeFiles/uniform_test.dir/uniform_test.cpp.o [ 1029s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/uniform_test.dir/uniform_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/uniform_test.cpp [ 1032s] [ 64%] Linking CXX executable uniform_test [ 1032s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/uniform_test.dir/link.txt --verbose=1 [ 1032s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/uniform_test.dir/uniform_test.cpp.o -o uniform_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 1032s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1032s] [ 64%] Built target uniform_test [ 1032s] make -f src/utils/tests/CMakeFiles/rotation_matrix_test.dir/build.make src/utils/tests/CMakeFiles/rotation_matrix_test.dir/depend [ 1032s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1032s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/rotation_matrix_test.dir/DependInfo.cmake [ 1032s] Scanning dependencies of target rotation_matrix_test [ 1032s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1032s] make -f src/utils/tests/CMakeFiles/rotation_matrix_test.dir/build.make src/utils/tests/CMakeFiles/rotation_matrix_test.dir/build [ 1032s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1032s] [ 65%] Building CXX object src/utils/tests/CMakeFiles/rotation_matrix_test.dir/rotation_matrix_test.cpp.o [ 1032s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/rotation_matrix_test.dir/rotation_matrix_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/rotation_matrix_test.cpp [ 1036s] [ 65%] Linking CXX executable rotation_matrix_test [ 1036s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/rotation_matrix_test.dir/link.txt --verbose=1 [ 1036s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/rotation_matrix_test.dir/rotation_matrix_test.cpp.o -o rotation_matrix_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 1036s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1036s] [ 65%] Built target rotation_matrix_test [ 1036s] make -f src/utils/tests/CMakeFiles/histogram.dir/build.make src/utils/tests/CMakeFiles/histogram.dir/depend [ 1036s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1036s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/histogram.dir/DependInfo.cmake [ 1036s] Scanning dependencies of target histogram [ 1036s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1036s] make -f src/utils/tests/CMakeFiles/histogram.dir/build.make src/utils/tests/CMakeFiles/histogram.dir/build [ 1036s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1036s] [ 65%] Building CXX object src/utils/tests/CMakeFiles/histogram.dir/histogram.cpp.o [ 1036s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/histogram.dir/histogram.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/histogram.cpp [ 1042s] [ 65%] Linking CXX executable histogram [ 1042s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/histogram.dir/link.txt --verbose=1 [ 1042s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/histogram.dir/histogram.cpp.o -o histogram /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 1042s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1042s] [ 65%] Built target histogram [ 1042s] make -f src/utils/tests/CMakeFiles/gather_buffer_test.dir/build.make src/utils/tests/CMakeFiles/gather_buffer_test.dir/depend [ 1042s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1042s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/gather_buffer_test.dir/DependInfo.cmake [ 1042s] Scanning dependencies of target gather_buffer_test [ 1042s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1042s] make -f src/utils/tests/CMakeFiles/gather_buffer_test.dir/build.make src/utils/tests/CMakeFiles/gather_buffer_test.dir/build [ 1042s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1042s] [ 67%] Building CXX object src/utils/tests/CMakeFiles/gather_buffer_test.dir/gather_buffer_test.cpp.o [ 1042s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -isystem /usr/lib/mpi/gcc/openmpi2/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/gather_buffer_test.dir/gather_buffer_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/gather_buffer_test.cpp [ 1054s] [ 67%] Linking CXX executable gather_buffer_test [ 1054s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gather_buffer_test.dir/link.txt --verbose=1 [ 1054s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now -pthread CMakeFiles/gather_buffer_test.dir/gather_buffer_test.cpp.o -o gather_buffer_test /usr/lib/libboost_unit_test_framework.so.1.71.0 /usr/lib/libboost_mpi.so.1.71.0 ../../config/EspressoConfig.so /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so [ 1055s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1055s] [ 67%] Built target gather_buffer_test [ 1055s] make -f src/utils/tests/CMakeFiles/all_compare_test.dir/build.make src/utils/tests/CMakeFiles/all_compare_test.dir/depend [ 1055s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1055s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/all_compare_test.dir/DependInfo.cmake [ 1055s] Scanning dependencies of target all_compare_test [ 1055s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1055s] make -f src/utils/tests/CMakeFiles/all_compare_test.dir/build.make src/utils/tests/CMakeFiles/all_compare_test.dir/build [ 1055s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1055s] [ 68%] Building CXX object src/utils/tests/CMakeFiles/all_compare_test.dir/all_compare_test.cpp.o [ 1055s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -isystem /usr/lib/mpi/gcc/openmpi2/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/all_compare_test.dir/all_compare_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/all_compare_test.cpp [ 1060s] [ 68%] Linking CXX executable all_compare_test [ 1060s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/all_compare_test.dir/link.txt --verbose=1 [ 1060s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now -pthread CMakeFiles/all_compare_test.dir/all_compare_test.cpp.o -o all_compare_test /usr/lib/libboost_unit_test_framework.so.1.71.0 /usr/lib/libboost_mpi.so.1.71.0 ../../config/EspressoConfig.so /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so [ 1061s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1061s] [ 68%] Built target all_compare_test [ 1061s] make -f src/utils/tests/CMakeFiles/scatter_buffer_test.dir/build.make src/utils/tests/CMakeFiles/scatter_buffer_test.dir/depend [ 1061s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1061s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/scatter_buffer_test.dir/DependInfo.cmake [ 1061s] Scanning dependencies of target scatter_buffer_test [ 1061s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1061s] make -f src/utils/tests/CMakeFiles/scatter_buffer_test.dir/build.make src/utils/tests/CMakeFiles/scatter_buffer_test.dir/build [ 1061s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1061s] [ 69%] Building CXX object src/utils/tests/CMakeFiles/scatter_buffer_test.dir/scatter_buffer_test.cpp.o [ 1061s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -isystem /usr/lib/mpi/gcc/openmpi2/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/scatter_buffer_test.dir/scatter_buffer_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/scatter_buffer_test.cpp [ 1067s] [ 69%] Linking CXX executable scatter_buffer_test [ 1067s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/scatter_buffer_test.dir/link.txt --verbose=1 [ 1067s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now -pthread CMakeFiles/scatter_buffer_test.dir/scatter_buffer_test.cpp.o -o scatter_buffer_test /usr/lib/libboost_unit_test_framework.so.1.71.0 /usr/lib/libboost_mpi.so.1.71.0 ../../config/EspressoConfig.so /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so [ 1068s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1068s] [ 69%] Built target scatter_buffer_test [ 1068s] make -f src/utils/tests/CMakeFiles/Counter_test.dir/build.make src/utils/tests/CMakeFiles/Counter_test.dir/depend [ 1068s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1068s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/Counter_test.dir/DependInfo.cmake [ 1068s] Scanning dependencies of target Counter_test [ 1068s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1068s] make -f src/utils/tests/CMakeFiles/Counter_test.dir/build.make src/utils/tests/CMakeFiles/Counter_test.dir/build [ 1068s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1068s] [ 69%] Building CXX object src/utils/tests/CMakeFiles/Counter_test.dir/Counter_test.cpp.o [ 1068s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -std=c++14 -o CMakeFiles/Counter_test.dir/Counter_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/Counter_test.cpp [ 1072s] [ 69%] Linking CXX executable Counter_test [ 1072s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/Counter_test.dir/link.txt --verbose=1 [ 1072s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now CMakeFiles/Counter_test.dir/Counter_test.cpp.o -o Counter_test /usr/lib/libboost_unit_test_framework.so.1.71.0 ../../config/EspressoConfig.so [ 1072s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1072s] [ 69%] Built target Counter_test [ 1072s] make -f src/utils/tests/CMakeFiles/all_gatherv_test.dir/build.make src/utils/tests/CMakeFiles/all_gatherv_test.dir/depend [ 1072s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1072s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests/CMakeFiles/all_gatherv_test.dir/DependInfo.cmake [ 1072s] Scanning dependencies of target all_gatherv_test [ 1072s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1072s] make -f src/utils/tests/CMakeFiles/all_gatherv_test.dir/build.make src/utils/tests/CMakeFiles/all_gatherv_test.dir/build [ 1072s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1072s] [ 69%] Building CXX object src/utils/tests/CMakeFiles/all_gatherv_test.dir/all_gatherv_test.cpp.o [ 1072s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -I/home/abuild/rpmbuild/BUILD/espresso/src/core -I/home/abuild/rpmbuild/BUILD/espresso/src/utils/include -I/home/abuild/rpmbuild/BUILD/espresso/src/config -I/home/abuild/rpmbuild/BUILD/espresso/build/src/config -isystem /usr/lib/mpi/gcc/openmpi2/include -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -pthread -std=c++14 -o CMakeFiles/all_gatherv_test.dir/all_gatherv_test.cpp.o -c /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/all_gatherv_test.cpp [ 1080s] [ 69%] Linking CXX executable all_gatherv_test [ 1080s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src/utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/all_gatherv_test.dir/link.txt --verbose=1 [ 1080s] /usr/bin/c++ -fomit-frame-pointer -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -Werror=return-type -DNDEBUG -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -O2 -g -DNDEBUG -Wl,--as-needed -Wl,--no-undefined -Wl,-z,now -pthread CMakeFiles/all_gatherv_test.dir/all_gatherv_test.cpp.o -o all_gatherv_test /usr/lib/libboost_unit_test_framework.so.1.71.0 /usr/lib/libboost_mpi.so.1.71.0 ../../config/EspressoConfig.so /usr/lib/libboost_serialization.so.1.71.0 /usr/lib/mpi/gcc/openmpi2/lib/libmpi.so [ 1080s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1080s] [ 69%] Built target all_gatherv_test [ 1080s] make -f src/CMakeFiles/check_unit_tests.dir/build.make src/CMakeFiles/check_unit_tests.dir/depend [ 1080s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1080s] cd /home/abuild/rpmbuild/BUILD/espresso/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/abuild/rpmbuild/BUILD/espresso /home/abuild/rpmbuild/BUILD/espresso/src /home/abuild/rpmbuild/BUILD/espresso/build /home/abuild/rpmbuild/BUILD/espresso/build/src /home/abuild/rpmbuild/BUILD/espresso/build/src/CMakeFiles/check_unit_tests.dir/DependInfo.cmake [ 1080s] Scanning dependencies of target check_unit_tests [ 1080s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1080s] make -f src/CMakeFiles/check_unit_tests.dir/build.make src/CMakeFiles/check_unit_tests.dir/build [ 1080s] make[3]: Entering directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1080s] cd /home/abuild/rpmbuild/BUILD/espresso/build/src && /usr/bin/ctest --timeout 300 --output-on-failure [ 1080s] Test project /home/abuild/rpmbuild/BUILD/espresso/build/src [ 1080s] Start 1: RuntimeError_test [ 1080s] 1/68 Test #1: RuntimeError_test ................ Passed 0.01 sec [ 1080s] Start 2: RuntimeErrorCollector_test [ 1080s] 2/68 Test #2: RuntimeErrorCollector_test ....... Passed 0.21 sec [ 1080s] Start 3: ScriptInterface_test [ 1080s] 3/68 Test #3: ScriptInterface_test ............. Passed 0.02 sec [ 1080s] Start 4: Wall_test [ 1080s] 4/68 Test #4: Wall_test ........................ Passed 0.09 sec [ 1080s] Start 5: Ellipsoid_test [ 1080s] 5/68 Test #5: Ellipsoid_test ................... Passed 0.02 sec [ 1080s] Start 6: MpiCallbacks_test [ 1083s] 6/68 Test #6: MpiCallbacks_test ................***Failed 2.26 sec [ 1083s] Running 8 test cases... [ 1083s] Running 8 test cases... [ 1083s] /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests/MpiCallbacks_test.cpp(55): error: in "invoke_test": check f(i, d) == (invoke(f, ia)) has failed [126.14149999999999 != 126.14149999999999] [ 1083s] /home/abuild/rpmbuild/BUILD/espresso/src/core/unit_tests/MpiCallbacks_test.cpp(55): error: in "invoke_test": check f(i, d) == (invoke(f, ia)) has failed [126.14149999999999 != 126.14149999999999] [ 1083s] [ 1083s] *** 1 failure is detected in the test module "MpiCallbacks test" [ 1083s]  [ 1083s] *** 1 failure is detected in the test module "MpiCallbacks test" [ 1083s] ------------------------------------------------------- [ 1083s] Primary job terminated normally, but 1 process returned [ 1083s] a non-zero exit code.. Per user-direction, the job has been aborted. [ 1083s] ------------------------------------------------------- [ 1083s] -------------------------------------------------------------------------- [ 1083s] mpiexec detected that one or more processes exited with non-zero status, thus causing [ 1083s] the job to be terminated. The first process to do so was: [ 1083s] [ 1083s] Process name: [[38606,1],1] [ 1083s] Exit code: 201 [ 1083s] -------------------------------------------------------------------------- [ 1083s] [ 1083s] Start 7: ParallelScriptInterface_test [ 1083s] 7/68 Test #7: ParallelScriptInterface_test ..... Passed 0.30 sec [ 1083s] Start 8: AutoParameters_test [ 1083s] 8/68 Test #8: AutoParameters_test .............. Passed 0.02 sec [ 1083s] Start 9: AutoParameter_test [ 1083s] 9/68 Test #9: AutoParameter_test ............... Passed 0.01 sec [ 1083s] Start 10: Variant_test [ 1083s] 10/68 Test #10: Variant_test ..................... Passed 0.01 sec [ 1083s] Start 11: ParticleIterator_test [ 1083s] 11/68 Test #11: ParticleIterator_test ............ Passed 0.01 sec [ 1083s] Start 12: link_cell_test [ 1083s] 12/68 Test #12: link_cell_test ................... Passed 0.02 sec [ 1083s] Start 13: verlet_ia_test [ 1085s] 13/68 Test #13: verlet_ia_test ................... Passed 1.68 sec [ 1085s] Start 14: ParticleCache_test [ 1085s] 14/68 Test #14: ParticleCache_test ............... Passed 0.33 sec [ 1085s] Start 15: Particle_test [ 1085s] 15/68 Test #15: Particle_test .................... Passed 0.01 sec [ 1085s] Start 16: get_value [ 1085s] 16/68 Test #16: get_value ........................ Passed 0.01 sec [ 1085s] Start 17: field_coupling_couplings [ 1085s] 17/68 Test #17: field_coupling_couplings ......... Passed 0.01 sec [ 1085s] Start 18: field_coupling_fields [ 1085s] 18/68 Test #18: field_coupling_fields ............ Passed 0.01 sec [ 1085s] Start 19: field_coupling_force_field [ 1085s] 19/68 Test #19: field_coupling_force_field ....... Passed 0.01 sec [ 1085s] Start 20: periodic_fold_test [ 1085s] 20/68 Test #20: periodic_fold_test ............... Passed 0.01 sec [ 1085s] Start 21: None_test [ 1085s] 21/68 Test #21: None_test ........................ Passed 0.01 sec [ 1085s] Start 22: grid_test [ 1085s] 22/68 Test #22: grid_test ........................ Passed 0.02 sec [ 1085s] Start 23: BoxGeometry_test [ 1085s] 23/68 Test #23: BoxGeometry_test ................. Passed 0.01 sec [ 1085s] Start 24: LocalBox_test [ 1085s] 24/68 Test #24: LocalBox_test .................... Passed 0.01 sec [ 1085s] Start 25: abs_test [ 1085s] 25/68 Test #25: abs_test ......................... Passed 0.01 sec [ 1085s] Start 26: Vector_test [ 1085s] 26/68 Test #26: Vector_test ...................... Passed 0.01 sec [ 1085s] Start 27: Factory_test [ 1085s] 27/68 Test #27: Factory_test ..................... Passed 0.01 sec [ 1085s] Start 28: NumeratedContainer_test [ 1085s] 28/68 Test #28: NumeratedContainer_test .......... Passed 0.01 sec [ 1085s] Start 29: make_function_test [ 1085s] 29/68 Test #29: make_function_test ............... Passed 0.01 sec [ 1085s] Start 30: List_test [ 1085s] 30/68 Test #30: List_test ........................ Passed 0.01 sec [ 1085s] Start 31: SkipIterator_test [ 1085s] 31/68 Test #31: SkipIterator_test ................ Passed 0.01 sec [ 1085s] Start 32: keys_test [ 1085s] 32/68 Test #32: keys_test ........................ Passed 0.01 sec [ 1085s] Start 33: Cache_test [ 1085s] 33/68 Test #33: Cache_test ....................... Passed 0.01 sec [ 1085s] Start 34: histogram [ 1085s] 34/68 Test #34: histogram ........................ Passed 0.01 sec [ 1085s] Start 35: accumulator [ 1085s] 35/68 Test #35: accumulator ...................... Passed 0.01 sec [ 1085s] Start 36: strcat_alloc [ 1085s] 36/68 Test #36: strcat_alloc ..................... Passed 0.01 sec [ 1085s] Start 37: int_pow [ 1085s] 37/68 Test #37: int_pow .......................... Passed 0.01 sec [ 1085s] Start 38: sgn [ 1085s] 38/68 Test #38: sgn .............................. Passed 0.01 sec [ 1085s] Start 39: AS_erfc_part [ 1085s] 39/68 Test #39: AS_erfc_part ..................... Passed 0.01 sec [ 1085s] Start 40: sinc [ 1085s] 40/68 Test #40: sinc ............................. Passed 0.01 sec [ 1085s] Start 41: as_const [ 1085s] 41/68 Test #41: as_const ......................... Passed 0.01 sec [ 1085s] Start 42: permute_ifield_test [ 1085s] 42/68 Test #42: permute_ifield_test .............. Passed 0.01 sec [ 1085s] Start 43: vec_rotate [ 1085s] 43/68 Test #43: vec_rotate ....................... Passed 0.01 sec [ 1085s] Start 44: tensor_product [ 1085s] 44/68 Test #44: tensor_product ................... Passed 0.01 sec [ 1085s] Start 45: interpolation_gradient [ 1085s] 45/68 Test #45: interpolation_gradient ........... Passed 0.01 sec [ 1085s] Start 46: interpolation [ 1085s] 46/68 Test #46: interpolation .................... Passed 0.01 sec [ 1085s] Start 47: Span_test [ 1085s] 47/68 Test #47: Span_test ........................ Passed 0.01 sec [ 1085s] Start 48: matrix_vector_product [ 1085s] 48/68 Test #48: matrix_vector_product ............***Failed 0.01 sec [ 1085s] Running 1 test case... [ 1085s] /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/matrix_vector_product.cpp(34): error: in "inner_product": check result[i] == boost::inner_product(matrix[i], vector, 0.0) has failed [ 1085s] /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/matrix_vector_product.cpp(34): error: in "inner_product": check result[i] == boost::inner_product(matrix[i], vector, 0.0) has failed [ 1085s] /home/abuild/rpmbuild/BUILD/espresso/src/utils/tests/matrix_vector_product.cpp(34): error: in "inner_product": check result[i] == boost::inner_product(matrix[i], vector, 0.0) has failed [ 1085s] [ 1085s] *** 3 failures are detected in the test module "matrix_vector_product test" [ 1085s]  [ 1085s] [ 1085s] Start 49: ravel_index [ 1085s] 49/68 Test #49: ravel_index ...................... Passed 0.01 sec [ 1085s] Start 50: tuple_test [ 1085s] 50/68 Test #50: tuple_test ....................... Passed 0.01 sec [ 1085s] Start 51: Array_test [ 1085s] 51/68 Test #51: Array_test ....................... Passed 0.01 sec [ 1085s] Start 52: contains_test [ 1085s] 52/68 Test #52: contains_test .................... Passed 0.01 sec [ 1085s] Start 53: Counter_test [ 1085s] 53/68 Test #53: Counter_test ..................... Passed 0.01 sec [ 1085s] Start 54: RunningAverage_test [ 1085s] 54/68 Test #54: RunningAverage_test .............. Passed 0.01 sec [ 1085s] Start 55: for_each_pair_test [ 1085s] 55/68 Test #55: for_each_pair_test ............... Passed 0.03 sec [ 1085s] Start 56: raster_test [ 1085s] 56/68 Test #56: raster_test ...................... Passed 0.01 sec [ 1085s] Start 57: make_lin_space_test [ 1085s] 57/68 Test #57: make_lin_space_test .............. Passed 0.01 sec [ 1085s] Start 58: sampling_test [ 1086s] 58/68 Test #58: sampling_test .................... Passed 0.01 sec [ 1086s] Start 59: coordinate_transformation_test [ 1086s] 59/68 Test #59: coordinate_transformation_test ... Passed 0.01 sec [ 1086s] Start 60: rotation_matrix_test [ 1086s] 60/68 Test #60: rotation_matrix_test ............. Passed 0.01 sec [ 1086s] Start 61: uniform_test [ 1086s] 61/68 Test #61: uniform_test ..................... Passed 0.01 sec [ 1086s] Start 62: gather_buffer_test [ 1086s] 62/68 Test #62: gather_buffer_test ............... Passed 0.31 sec [ 1086s] Start 63: scatter_buffer_test [ 1086s] 63/68 Test #63: scatter_buffer_test .............. Passed 0.28 sec [ 1086s] Start 64: all_compare_test [ 1086s] 64/68 Test #64: all_compare_test ................. Passed 0.26 sec [ 1086s] Start 65: gatherv_test [ 1087s] 65/68 Test #65: gatherv_test ..................... Passed 0.21 sec [ 1087s] Start 66: all_gatherv_test [ 1087s] 66/68 Test #66: all_gatherv_test ................. Passed 0.21 sec [ 1087s] Start 67: sendrecv_test [ 1087s] 67/68 Test #67: sendrecv_test .................... Passed 0.26 sec [ 1087s] Start 68: PdbParser_test [ 1087s] 68/68 Test #68: PdbParser_test ................... Passed 0.01 sec [ 1087s] [ 1087s] 97% tests passed, 2 tests failed out of 68 [ 1087s] [ 1087s] Total Test time (real) = 7.01 sec [ 1087s] [ 1087s] The following tests FAILED: [ 1087s] 6 - MpiCallbacks_test (Failed) [ 1087s] 48 - matrix_vector_product (Failed) [ 1087s] Errors while running CTest [ 1087s] make[3]: *** [src/CMakeFiles/check_unit_tests.dir/build.make:60: src/CMakeFiles/check_unit_tests] Error 8 [ 1087s] make[3]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1087s] make[2]: *** [CMakeFiles/Makefile2:2290: src/CMakeFiles/check_unit_tests.dir/all] Error 2 [ 1087s] make[2]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1087s] make[1]: *** [CMakeFiles/Makefile2:125: CMakeFiles/check.dir/rule] Error 2 [ 1087s] make[1]: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1087s] make: *** [Makefile:191: check] Error 2 [ 1087s] make: Leaving directory '/home/abuild/rpmbuild/BUILD/espresso/build' [ 1087s] error: Bad exit status from /var/tmp/rpm-tmp.awmz2R (%check) [ 1087s] [ 1087s] [ 1087s] RPM build errors: [ 1087s] Bad exit status from /var/tmp/rpm-tmp.awmz2R (%check) [ 1087s] [ 1087s] lamb15 failed "build python3-espressomd.spec" at Fri Nov 15 17:18:36 UTC 2019. [ 1087s] [ 1087s] ### VM INTERACTION START ### [ 1090s] [ 1080.323759] sysrq: Power Off [ 1090s] [ 1080.330856] reboot: Power down [ 1090s] ### VM INTERACTION END ### [ 1090s] [ 1090s] lamb15 failed "build python3-espressomd.spec" at Fri Nov 15 17:18:39 UTC 2019. [ 1090s]