diff --git a/benchmarks/bench_mixed_attention.py b/benchmarks/bench_mixed_attention.py
index caf8c633f7..f581628b97 100644
--- a/benchmarks/bench_mixed_attention.py
+++ b/benchmarks/bench_mixed_attention.py
@@ -68,14 +68,18 @@ def run_bench(
         q_data_type=torch.bfloat16,
         kv_data_type=torch.bfloat16,
     )
+    o = wrapper_old.run(q, kv_data)
     ms_old = do_bench(lambda: wrapper_old.run(q, kv_data))
 
-    if len(p_kv_lens) > 0:
+    if len(p_kv_lens) == 1:
         q_d = q[: d_q_indptr[-1]]
         kv_d = kv_data[: d_kv_indptr[-1]].unbind(1)
         q_p = q[d_q_indptr[-1] :]
         k_p, v_p = kv_data[d_kv_indptr[-1] :].unbind(1)
         k_p, v_p = k_p.squeeze(1), v_p.squeeze(1)
+        kv_indices_d = torch.arange(
+            0, d_kv_indptr[-1], device=device, dtype=torch.int32
+        )
 
         last_page_len_d = (d_seq_lens_blocks - 1) % page_block_size + 1
         wrapper_pod = flashinfer.PODWithPagedKVCacheWrapper(
@@ -83,8 +87,8 @@ def run_bench(
             kv_layout=kv_layout,
         )
         wrapper_pod.plan(
-            d_q_indptr.to(device),
             d_kv_indptr.to(device),
+            kv_indices_d.to(device),
             last_page_len=last_page_len_d,
             num_qo_heads=num_qo_heads,
             num_kv_heads=num_kv_heads,
@@ -93,6 +97,19 @@ def run_bench(
             q_data_type=torch.bfloat16,
             kv_data_type=torch.bfloat16,
         )
+        o_p, o_d = wrapper_pod.run(
+            q_p,
+            k_p,
+            v_p,
+            q_d,
+            kv_data,
+            causal_p=causal,
+        )
+        o_pod = torch.cat([o_d, o_p], dim=0)
+        # Verify output matches
+        torch.testing.assert_close(
+            o, o_pod, rtol=1e-3, atol=1e-3, msg="POD-Attention output mismatch!"
+        )
         ms_pod = do_bench(
             lambda: wrapper_pod.run(
                 q_p,
@@ -106,7 +123,7 @@ def run_bench(
         )
 
     print(f"Elapsed time (Batched Prefill): {ms_old:.2f} ms")
-    if len(p_kv_lens) > 0:
+    if len(p_kv_lens) == 1:
         print(f"Elapsed time (POD Attention): {ms_pod:.2f} ms")
     total_bytes = (
         q.numel() * q.element_size() + kv_data.numel() * kv_data.element_size()
@@ -116,7 +133,7 @@ def run_bench(
     bandwidth_old_gb_s = total_bytes / (ms_old * 1e-3) / (1024**3)
 
     print(f"Memory bandwidth (Batched Prefill): {bandwidth_old_gb_s:.2f} GB/s")
-    if len(p_kv_lens) > 0:
+    if len(p_kv_lens) == 1:
         bandwidth_pod_gb_s = total_bytes / (ms_pod * 1e-3) / (1024**3)
         print(f"Memory bandwidth (POD Attention): {bandwidth_pod_gb_s:.2f} GB/s")
 
@@ -128,8 +145,8 @@ def run_bench(
     # Irregular sequence lengths for prefill and decode
     d_q_len_configs = [[1] * 122, [1] * 128, [1] * 242, [1] * 256]
     d_kv_len_configs = [[600] * 122, [10000] * 128, [400] * 242, [8192] * 256]
-    p_q_configs = [[17] * 8, [], [17] * 16, []]
-    p_kv_configs = [[10000] * 8, [], [8192] * 16, []]
+    p_q_configs = [[17] * 1, [10000], [17] * 1, []]
+    p_kv_configs = [[10000] * 1, [10000], [8192] * 1, []]
 
     # construct random length testcases
     for _ in range(1):
diff --git a/include/flashinfer/attention/prefill.cuh b/include/flashinfer/attention/prefill.cuh
index fb0d260dc3..e4cc53b0e4 100644
--- a/include/flashinfer/attention/prefill.cuh
+++ b/include/flashinfer/attention/prefill.cuh
@@ -797,8 +797,8 @@ __device__ __forceinline__ void logits_mask_multi_item_scoring(
     const uint32_t kv_len, const uint32_t window_left, const uint32_t chunk_end,
     const uint_fastdiv group_size, typename KTraits::DTypeQKAccum (*s_frag)[KTraits::NUM_MMA_KV][8],
     // new arguments for compact description of mask
-    const uint32_t prefix_len, uint16_t* token_pos_in_items) {
-  const uint32_t lane_idx = threadIdx.x, kv_head_idx = blockIdx.z;
+    const uint32_t prefix_len, uint16_t* token_pos_in_items, const uint32_t lane_idx = threadIdx.x,
+    const uint32_t kv_head_idx = blockIdx.z) {
   constexpr uint32_t NUM_MMA_Q = KTraits::NUM_MMA_Q;
   constexpr uint32_t NUM_MMA_KV = KTraits::NUM_MMA_KV;
   using DTypeQKAccum = typename KTraits::DTypeQKAccum;
@@ -2285,23 +2285,26 @@ __device__ __forceinline__ void BatchPrefillWithPagedKVCacheDevice(
           if (iter >= mask_iteration || iter < window_iteration) {
             logits_mask<KTraits>(
                 params, variant, /*batch_idx=*/request_idx, qo_packed_idx_base,
-                chunk_start + (iter * NUM_WARPS_KV + get_warp_idx_kv<KTraits>()) * NUM_MMA_KV * 16,
+                chunk_start +
+                    (iter * NUM_WARPS_KV + get_warp_idx_kv<KTraits>(tid.z)) * NUM_MMA_KV * 16,
                 qo_len, kv_len, chunk_end, group_size, s_frag);
           }
         } else if constexpr (MASK_MODE == MaskMode::kMultiItemScoring) {
           if (iter + 1 >= num_iterations_prefix) {
             logits_mask_multi_item_scoring<KTraits>(
                 params, variant, /*batch_idx=*/request_idx, qo_packed_idx_base,
-                chunk_start + (iter * NUM_WARPS_KV + get_warp_idx_kv<KTraits>()) * NUM_MMA_KV * 16,
+                chunk_start +
+                    (iter * NUM_WARPS_KV + get_warp_idx_kv<KTraits>(tid.z)) * NUM_MMA_KV * 16,
                 qo_len, kv_len, window_left, chunk_end, group_size, s_frag,
                 __ldg(maybe_prefix_len_ptr + request_idx),
-                maybe_token_pos_in_items_ptr + request_idx * token_pos_in_items_len);
+                maybe_token_pos_in_items_ptr + request_idx * token_pos_in_items_len, tid.x,
+                kv_head_idx);
           } else {
             if (iter >= mask_iteration || iter < window_iteration) {
               logits_mask<KTraits>(
                   params, variant, /*batch_idx=*/request_idx, qo_packed_idx_base,
                   chunk_start +
-                      (iter * NUM_WARPS_KV + get_warp_idx_kv<KTraits>()) * NUM_MMA_KV * 16,
+                      (iter * NUM_WARPS_KV + get_warp_idx_kv<KTraits>(tid.z)) * NUM_MMA_KV * 16,
                   qo_len, kv_len, chunk_end, group_size, s_frag);
             }
           }