From 0640c8f3ea6f3df9e544a5151347fbcc496383be Mon Sep 17 00:00:00 2001
From: daquinteroflex <dario@flexcompute.com>
Date: Wed, 30 Oct 2024 14:38:15 +0100
Subject: [PATCH] :arrow_up: Looser 2.0 numpy functionality

---
 docs/faq            |    2 +-
 docs/notebooks      |    2 +-
 poetry.lock         | 2018 ++++++++++++++++++++++---------------------
 pyproject.toml      |   13 +-
 tests/utils.py      |    2 +-
 tidy3d/packaging.py |   23 +
 6 files changed, 1053 insertions(+), 1007 deletions(-)

diff --git a/docs/faq b/docs/faq
index 802f86188..9f577fe81 160000
--- a/docs/faq
+++ b/docs/faq
@@ -1 +1 @@
-Subproject commit 802f8618852493bbb70e437d02ef6a33594ca6bd
+Subproject commit 9f577fe81380ab45493187b59b5b95a0e163fe8e
diff --git a/docs/notebooks b/docs/notebooks
index 86b0310c5..53381257a 160000
--- a/docs/notebooks
+++ b/docs/notebooks
@@ -1 +1 @@
-Subproject commit 86b0310c55af92be71c04d7e2c6865d1090c3534
+Subproject commit 53381257a25e92d21d3c710e5e5e31ddc83e9a75
diff --git a/poetry.lock b/poetry.lock
index da68299e1..a472a6661 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -53,13 +53,13 @@ files = [
 
 [[package]]
 name = "anyio"
-version = "4.6.0"
+version = "4.6.2.post1"
 description = "High level compatibility layer for multiple asynchronous event loop implementations"
 optional = true
 python-versions = ">=3.9"
 files = [
-    {file = "anyio-4.6.0-py3-none-any.whl", hash = "sha256:c7d2e9d63e31599eeb636c8c5c03a7e108d73b345f064f1c19fdc87b79036a9a"},
-    {file = "anyio-4.6.0.tar.gz", hash = "sha256:137b4559cbb034c477165047febb6ff83f390fc3b20bf181c1fc0a728cb8beeb"},
+    {file = "anyio-4.6.2.post1-py3-none-any.whl", hash = "sha256:6d170c36fba3bdd840c73d3868c1e777e33676a69c3a72cf0a0d5d6d8009b61d"},
+    {file = "anyio-4.6.2.post1.tar.gz", hash = "sha256:4c8bc31ccdb51c7f7bd251f51c609e038d63e34219b44aa86e47576389880b4c"},
 ]
 
 [package.dependencies]
@@ -70,7 +70,7 @@ typing-extensions = {version = ">=4.1", markers = "python_version < \"3.11\""}
 
 [package.extras]
 doc = ["Sphinx (>=7.4,<8.0)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx-rtd-theme"]
-test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "uvloop (>=0.21.0b1)"]
+test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "truststore (>=0.9.1)", "uvloop (>=0.21.0b1)"]
 trio = ["trio (>=0.26.1)"]
 
 [[package]]
@@ -162,13 +162,13 @@ test = ["dateparser (==1.*)", "pre-commit", "pytest", "pytest-cov", "pytest-mock
 
 [[package]]
 name = "astroid"
-version = "3.3.4"
+version = "3.3.5"
 description = "An abstract syntax tree for Python with inference support."
 optional = true
 python-versions = ">=3.9.0"
 files = [
-    {file = "astroid-3.3.4-py3-none-any.whl", hash = "sha256:5eba185467253501b62a9f113c263524b4f5d55e1b30456370eed4cdbd6438fd"},
-    {file = "astroid-3.3.4.tar.gz", hash = "sha256:e73d0b62dd680a7c07cb2cd0ce3c22570b044dd01bd994bc3a2dd16c6cbba162"},
+    {file = "astroid-3.3.5-py3-none-any.whl", hash = "sha256:a9d1c946ada25098d790e079ba2a1b112157278f3fb7e718ae6a9252f5835dc8"},
+    {file = "astroid-3.3.5.tar.gz", hash = "sha256:5cfc40ae9f68311075d27ef68a4841bdc5cc7f6cf86671b49f00607d30188e2d"},
 ]
 
 [package.dependencies]
@@ -227,18 +227,20 @@ tests-mypy = ["mypy (>=1.11.1)", "pytest-mypy-plugins"]
 
 [[package]]
 name = "autograd"
-version = "1.6.2"
-description = "Efficiently computes derivatives of numpy code."
+version = "1.7.0"
+description = "Efficiently computes derivatives of NumPy code."
 optional = false
-python-versions = "*"
+python-versions = ">=3.8"
 files = [
-    {file = "autograd-1.6.2-py3-none-any.whl", hash = "sha256:208dde2a938e63b4f8f5049b1985505139e529068b0d26f8cd7771fd3eb145d5"},
-    {file = "autograd-1.6.2.tar.gz", hash = "sha256:8731e08a0c4e389d8695a40072ada4512641c113b6cace8f4cfbe8eb7e9aedeb"},
+    {file = "autograd-1.7.0-py3-none-any.whl", hash = "sha256:49680300f842f3a8722b060ac0d3ed7aca071d1ad4d3d38c9fdadafdcc73c30b"},
+    {file = "autograd-1.7.0.tar.gz", hash = "sha256:de743fd368d6df523cd37305dcd171861a9752a144493677d2c9f5a56983ff2f"},
 ]
 
 [package.dependencies]
-future = ">=0.15.2"
-numpy = ">=1.12"
+numpy = "*"
+
+[package.extras]
+scipy = ["scipy"]
 
 [[package]]
 name = "babel"
@@ -277,33 +279,33 @@ lxml = ["lxml"]
 
 [[package]]
 name = "black"
-version = "24.8.0"
+version = "24.10.0"
 description = "The uncompromising code formatter."
 optional = true
-python-versions = ">=3.8"
+python-versions = ">=3.9"
 files = [
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+    {file = "black-24.10.0-cp39-cp39-macosx_10_9_x86_64.whl", hash = "sha256:17374989640fbca88b6a448129cd1745c5eb8d9547b464f281b251dd00155ccd"},
+    {file = "black-24.10.0-cp39-cp39-macosx_11_0_arm64.whl", hash = "sha256:63f626344343083322233f175aaf372d326de8436f5928c042639a4afbbf1d3f"},
+    {file = "black-24.10.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_28_x86_64.whl", hash = "sha256:ccfa1d0cb6200857f1923b602f978386a3a2758a65b52e0950299ea014be6800"},
+    {file = "black-24.10.0-cp39-cp39-win_amd64.whl", hash = "sha256:2cd9c95431d94adc56600710f8813ee27eea544dd118d45896bb734e9d7a0dc7"},
+    {file = "black-24.10.0-py3-none-any.whl", hash = "sha256:3bb2b7a1f7b685f85b11fed1ef10f8a9148bceb49853e47a294a3dd963c1dd7d"},
+    {file = "black-24.10.0.tar.gz", hash = "sha256:846ea64c97afe3bc677b761787993be4991810ecc7a4a937816dd6bddedc4875"},
 ]
 
 [package.dependencies]
@@ -317,41 +319,40 @@ typing-extensions = {version = ">=4.0.1", markers = "python_version < \"3.11\""}
 
 [package.extras]
 colorama = ["colorama (>=0.4.3)"]
-d = ["aiohttp (>=3.7.4)", "aiohttp (>=3.7.4,!=3.9.0)"]
+d = ["aiohttp (>=3.10)"]
 jupyter = ["ipython (>=7.8.0)", "tokenize-rt (>=3.2.0)"]
 uvloop = ["uvloop (>=0.15.2)"]
 
 [[package]]
 name = "bleach"
-version = "6.1.0"
+version = "6.2.0"
 description = "An easy safelist-based HTML-sanitizing tool."
 optional = true
-python-versions = ">=3.8"
+python-versions = ">=3.9"
 files = [
-    {file = "bleach-6.1.0-py3-none-any.whl", hash = "sha256:3225f354cfc436b9789c66c4ee030194bee0568fbf9cbdad3bc8b5c26c5f12b6"},
-    {file = "bleach-6.1.0.tar.gz", hash = "sha256:0a31f1837963c41d46bbf1331b8778e1308ea0791db03cc4e7357b97cf42a8fe"},
+    {file = "bleach-6.2.0-py3-none-any.whl", hash = "sha256:117d9c6097a7c3d22fd578fcd8d35ff1e125df6736f554da4e432fdd63f31e5e"},
+    {file = "bleach-6.2.0.tar.gz", hash = "sha256:123e894118b8a599fd80d3ec1a6d4cc7ce4e5882b1317a7e1ba69b56e95f991f"},
 ]
 
 [package.dependencies]
-six = ">=1.9.0"
 webencodings = "*"
 
 [package.extras]
-css = ["tinycss2 (>=1.1.0,<1.3)"]
+css = ["tinycss2 (>=1.1.0,<1.5)"]
 
 [[package]]
 name = "boto3"
-version = "1.35.27"
+version = "1.35.51"
 description = "The AWS SDK for Python"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "boto3-1.35.27-py3-none-any.whl", hash = "sha256:3da139ca038032e92086e26d23833b557f0c257520162bfd3d6f580bf8032c86"},
-    {file = "boto3-1.35.27.tar.gz", hash = "sha256:10d0fe15670b83a3f26572ab20d9152a064cee4c54b5ea9a1eeb1f0c3b807a7b"},
+    {file = "boto3-1.35.51-py3-none-any.whl", hash = "sha256:c922f6a18958af9d8af0489d6d8503b517029d8159b26aa4859a8294561c72e9"},
+    {file = "boto3-1.35.51.tar.gz", hash = "sha256:a57c6c7012ecb40c43e565a6f7a891f39efa990ff933eab63cd456f7501c2731"},
 ]
 
 [package.dependencies]
-botocore = ">=1.35.27,<1.36.0"
+botocore = ">=1.35.51,<1.36.0"
 jmespath = ">=0.7.1,<2.0.0"
 s3transfer = ">=0.10.0,<0.11.0"
 
@@ -360,46 +361,46 @@ crt = ["botocore[crt] (>=1.21.0,<2.0a0)"]
 
 [[package]]
 name = "botocore"
-version = "1.35.27"
+version = "1.35.51"
 description = "Low-level, data-driven core of boto 3."
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "botocore-1.35.27-py3-none-any.whl", hash = "sha256:c299c70b5330a8634e032883ce8a72c2c6d9fdbc985d8191199cb86b92e7cbbd"},
-    {file = "botocore-1.35.27.tar.gz", hash = "sha256:f68875c26cd57a9d22c0f7a981ecb1636d7ce4d0e35797e04765b53e7bfed3e7"},
+    {file = "botocore-1.35.51-py3-none-any.whl", hash = "sha256:4d65b00111bd12b98e9f920ecab602cf619cc6a6d0be6e5dd53f517e4b92901c"},
+    {file = "botocore-1.35.51.tar.gz", hash = "sha256:a9b3d1da76b3e896ad74605c01d88f596324a3337393d4bfbfa0d6c35822ca9c"},
 ]
 
 [package.dependencies]
 jmespath = ">=0.7.1,<2.0.0"
 python-dateutil = ">=2.1,<3.0.0"
 urllib3 = [
-    {version = ">=1.25.4,<2.2.0 || >2.2.0,<3", markers = "python_version >= \"3.10\""},
     {version = ">=1.25.4,<1.27", markers = "python_version < \"3.10\""},
+    {version = ">=1.25.4,<2.2.0 || >2.2.0,<3", markers = "python_version >= \"3.10\""},
 ]
 
 [package.extras]
-crt = ["awscrt (==0.21.5)"]
+crt = ["awscrt (==0.22.0)"]
 
 [[package]]
 name = "bracex"
-version = "2.5"
+version = "2.5.post1"
 description = "Bash style brace expander."
 optional = true
 python-versions = ">=3.8"
 files = [
-    {file = "bracex-2.5-py3-none-any.whl", hash = "sha256:d2fcf4b606a82ac325471affe1706dd9bbaa3536c91ef86a31f6b766f3dad1d0"},
-    {file = "bracex-2.5.tar.gz", hash = "sha256:0725da5045e8d37ea9592ab3614d8b561e22c3c5fde3964699be672e072ab611"},
+    {file = "bracex-2.5.post1-py3-none-any.whl", hash = "sha256:13e5732fec27828d6af308628285ad358047cec36801598368cb28bc631dbaf6"},
+    {file = "bracex-2.5.post1.tar.gz", hash = "sha256:12c50952415bfa773d2d9ccb8e79651b8cdb1f31a42f6091b804f6ba2b4a66b6"},
 ]
 
 [[package]]
 name = "bump-my-version"
-version = "0.26.1"
+version = "0.28.0"
 description = "Version bump your Python project"
 optional = true
 python-versions = ">=3.8"
 files = [
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 [package.dependencies]
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 [[package]]
 name = "chex"
-version = "0.1.86"
+version = "0.1.87"
 description = "Chex: Testing made fun, in JAX!"
 optional = true
 python-versions = ">=3.9"
 files = [
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 [package.dependencies]
 absl-py = ">=0.9.0"
-jax = ">=0.4.16"
-jaxlib = ">=0.1.37"
+jax = ">=0.4.27"
+jaxlib = ">=0.4.27"
 numpy = ">=1.24.1"
 setuptools = {version = "*", markers = "python_version >= \"3.12\""}
 toolz = ">=0.9.0"
@@ -675,13 +691,13 @@ colorama = {version = "*", markers = "platform_system == \"Windows\""}
 
 [[package]]
 name = "cloudpickle"
-version = "3.0.0"
+version = "3.1.0"
 description = "Pickler class to extend the standard pickle.Pickler functionality"
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [[package]]
@@ -816,83 +832,73 @@ test-no-images = ["pytest", "pytest-cov", "pytest-rerunfailures", "pytest-xdist"
 
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 name = "coverage"
-version = "7.6.1"
+version = "7.6.4"
 description = "Code coverage measurement for Python"
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+python-versions = ">=3.9"
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 [[package]]
@@ -997,26 +1007,26 @@ files = [
 
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-version = "2.8.4"
+version = "2.9.1"
 description = "DEVSIM: TCAD Device Simulator"
 optional = true
 python-versions = "*"
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 ]
 
 [[package]]
 name = "dill"
-version = "0.3.8"
+version = "0.3.9"
 description = "serialize all of Python"
 optional = true
 python-versions = ">=3.8"
 files = [
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 [package.extras]
@@ -1025,13 +1035,13 @@ profile = ["gprof2dot (>=2022.7.29)"]
 
 [[package]]
 name = "distlib"
-version = "0.3.8"
+version = "0.3.9"
 description = "Distribution utilities"
 optional = true
 python-versions = "*"
 files = [
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 [[package]]
@@ -1112,13 +1122,13 @@ tests = ["asttokens (>=2.1.0)", "coverage", "coverage-enable-subprocess", "ipyth
 
 [[package]]
 name = "fastcore"
-version = "1.7.9"
+version = "1.7.19"
 description = "Python supercharged for fastai development"
 optional = true
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.dependencies]
@@ -1159,22 +1169,22 @@ typing = ["typing-extensions (>=4.12.2)"]
 
 [[package]]
 name = "flax"
-version = "0.8.4"
+version = "0.8.5"
 description = "Flax: A neural network library for JAX designed for flexibility"
 optional = true
 python-versions = ">=3.9"
 files = [
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 ]
 
 [package.dependencies]
-jax = ">=0.4.19"
+jax = ">=0.4.27"
 msgpack = "*"
 numpy = [
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     {version = ">=1.26.0", markers = "python_version >= \"3.12\""},
     {version = ">=1.23.2", markers = "python_version >= \"3.11\" and python_version < \"3.12\""},
-    {version = ">=1.22", markers = "python_version < \"3.11\""},
 ]
 optax = "*"
 orbax-checkpoint = "*"
@@ -1185,7 +1195,7 @@ typing-extensions = ">=4.2"
 
 [package.extras]
 all = ["matplotlib"]
-testing = ["black[jupyter] (==23.7.0)", "clu", "clu (<=0.0.9)", "einops", "gymnasium[accept-rom-license,atari]", "jaxlib", "jraph (>=0.0.6dev0)", "ml-collections", "mypy", "nbstripout", "opencv-python", "penzai", "pytest", "pytest-cov", "pytest-custom-exit-code", "pytest-xdist", "pytype", "sentencepiece", "tensorflow", "tensorflow-datasets", "tensorflow-text (>=2.11.0)", "torch"]
+testing = ["black[jupyter] (==23.7.0)", "clu", "clu (<=0.0.9)", "einops", "gymnasium[accept-rom-license,atari]", "jaxlib", "jaxtyping", "jraph (>=0.0.6dev0)", "ml-collections", "mypy", "nbstripout", "opencv-python", "penzai (>=0.1.2)", "pytest", "pytest-cov", "pytest-custom-exit-code", "pytest-xdist", "pytype", "sentencepiece", "tensorflow (>=2.12.0)", "tensorflow-datasets", "tensorflow-text (>=2.11.0)", "torch"]
 
 [[package]]
 name = "fonttools"
@@ -1271,13 +1281,13 @@ files = [
 
 [[package]]
 name = "fsspec"
-version = "2024.9.0"
+version = "2024.10.0"
 description = "File-system specification"
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.extras]
@@ -1312,7 +1322,7 @@ tqdm = ["tqdm"]
 name = "future"
 version = "1.0.0"
 description = "Clean single-source support for Python 3 and 2"
-optional = false
+optional = true
 python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
 files = [
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@@ -1334,52 +1344,52 @@ numpy = "*"
 
 [[package]]
 name = "gdstk"
-version = "0.9.51"
+version = "0.9.56"
 description = "Python module for creation and manipulation of GDSII files."
 optional = true
-python-versions = ">=3.8"
+python-versions = ">=3.9"
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+]
+
+[package.dependencies]
+numpy = ">=1.19.3"
 
 [[package]]
 name = "httpcore"
-version = "1.0.5"
+version = "1.0.6"
 description = "A minimal low-level HTTP client."
 optional = true
 python-versions = ">=3.8"
 files = [
-    {file = "httpcore-1.0.5-py3-none-any.whl", hash = "sha256:421f18bac248b25d310f3cacd198d55b8e6125c107797b609ff9b7a6ba7991b5"},
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 ]
 
 [package.dependencies]
@@ -1514,7 +1529,7 @@ h11 = ">=0.13,<0.15"
 asyncio = ["anyio (>=4.0,<5.0)"]
 http2 = ["h2 (>=3,<5)"]
 socks = ["socksio (==1.*)"]
-trio = ["trio (>=0.22.0,<0.26.0)"]
+trio = ["trio (>=0.22.0,<1.0)"]
 
 [[package]]
 name = "httpx"
@@ -1541,6 +1556,20 @@ http2 = ["h2 (>=3,<5)"]
 socks = ["socksio (==1.*)"]
 zstd = ["zstandard (>=0.18.0)"]
 
+[[package]]
+name = "humanize"
+version = "4.11.0"
+description = "Python humanize utilities"
+optional = true
+python-versions = ">=3.9"
+files = [
+    {file = "humanize-4.11.0-py3-none-any.whl", hash = "sha256:b53caaec8532bcb2fff70c8826f904c35943f8cecaca29d272d9df38092736c0"},
+    {file = "humanize-4.11.0.tar.gz", hash = "sha256:e66f36020a2d5a974c504bd2555cf770621dbdbb6d82f94a6857c0b1ea2608be"},
+]
+
+[package.extras]
+tests = ["freezegun", "pytest", "pytest-cov"]
+
 [[package]]
 name = "identify"
 version = "2.6.1"
@@ -1757,43 +1786,38 @@ colors = ["colorama (>=0.4.6)"]
 
 [[package]]
 name = "jax"
-version = "0.4.25"
+version = "0.4.30"
 description = "Differentiate, compile, and transform Numpy code."
 optional = true
 python-versions = ">=3.9"
 files = [
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+    {file = "jax-0.4.30.tar.gz", hash = "sha256:94d74b5b2db0d80672b61d83f1f63ebf99d2ab7398ec12b2ca0c9d1e97afe577"},
 ]
 
 [package.dependencies]
 importlib-metadata = {version = ">=4.6", markers = "python_version < \"3.10\""}
-jaxlib = {version = "0.4.25", optional = true, markers = "extra == \"cpu\""}
+jaxlib = ">=0.4.27,<=0.4.30"
 ml-dtypes = ">=0.2.0"
 numpy = [
+    {version = ">=1.22", markers = "python_version < \"3.11\""},
     {version = ">=1.26.0", markers = "python_version >= \"3.12\""},
     {version = ">=1.23.2", markers = "python_version >= \"3.11\" and python_version < \"3.12\""},
-    {version = ">=1.22", markers = "python_version < \"3.11\""},
 ]
 opt-einsum = "*"
 scipy = [
-    {version = ">=1.11.1", markers = "python_version >= \"3.12\""},
     {version = ">=1.9", markers = "python_version < \"3.12\""},
+    {version = ">=1.11.1", markers = "python_version >= \"3.12\""},
 ]
 
 [package.extras]
-australis = ["protobuf (>=3.13,<4)"]
-ci = ["jaxlib (==0.4.24)"]
-cpu = ["jaxlib (==0.4.25)"]
-cuda = ["jaxlib (==0.4.25+cuda11.cudnn86)"]
-cuda11-cudnn86 = ["jaxlib (==0.4.25+cuda11.cudnn86)"]
-cuda11-local = ["jaxlib (==0.4.25+cuda11.cudnn86)"]
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-cuda12-pip = ["jaxlib (==0.4.25+cuda12.cudnn89)", "nvidia-cublas-cu12 (>=12.3.4.1)", "nvidia-cuda-cupti-cu12 (>=12.3.101)", "nvidia-cuda-nvcc-cu12 (>=12.3.107)", "nvidia-cuda-runtime-cu12 (>=12.3.101)", "nvidia-cudnn-cu12 (>=8.9.7.29)", "nvidia-cufft-cu12 (>=11.0.12.1)", "nvidia-cusolver-cu12 (>=11.5.4.101)", "nvidia-cusparse-cu12 (>=12.2.0.103)", "nvidia-nccl-cu12 (>=2.19.3)", "nvidia-nvjitlink-cu12 (>=12.3.101)"]
-minimum-jaxlib = ["jaxlib (==0.4.20)"]
-tpu = ["jaxlib (==0.4.25)", "libtpu-nightly (==0.1.dev20240224)", "requests"]
+ci = ["jaxlib (==0.4.29)"]
+cuda = ["jax-cuda12-plugin[with-cuda] (==0.4.30)", "jaxlib (==0.4.30)"]
+cuda12 = ["jax-cuda12-plugin[with-cuda] (==0.4.30)", "jaxlib (==0.4.30)"]
+cuda12-local = ["jax-cuda12-plugin (==0.4.30)", "jaxlib (==0.4.30)"]
+cuda12-pip = ["jax-cuda12-plugin[with-cuda] (==0.4.30)", "jaxlib (==0.4.30)"]
+minimum-jaxlib = ["jaxlib (==0.4.27)"]
+tpu = ["jaxlib (==0.4.30)", "libtpu-nightly (==0.1.dev20240617)", "requests"]
 
 [package.source]
 type = "legacy"
@@ -1802,45 +1826,41 @@ reference = "jaxsource"
 
 [[package]]
 name = "jaxlib"
-version = "0.4.25"
+version = "0.4.30"
 description = "XLA library for JAX"
 optional = true
 python-versions = ">=3.9"
 files = [
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 ]
 
 [package.dependencies]
 ml-dtypes = ">=0.2.0"
 numpy = ">=1.22"
 scipy = [
-    {version = ">=1.11.1", markers = "python_version >= \"3.12\""},
     {version = ">=1.9", markers = "python_version < \"3.12\""},
+    {version = ">=1.11.1", markers = "python_version >= \"3.12\""},
 ]
 
-[package.extras]
-cuda11-pip = ["nvidia-cublas-cu11 (>=11.11)", "nvidia-cuda-cupti-cu11 (>=11.8)", "nvidia-cuda-nvcc-cu11 (>=11.8)", "nvidia-cuda-runtime-cu11 (>=11.8)", "nvidia-cudnn-cu11 (>=8.8)", "nvidia-cufft-cu11 (>=10.9)", "nvidia-cusolver-cu11 (>=11.4)", "nvidia-cusparse-cu11 (>=11.7)"]
-cuda12-pip = ["nvidia-cublas-cu12", "nvidia-cuda-cupti-cu12", "nvidia-cuda-nvcc-cu12", "nvidia-cuda-runtime-cu12", "nvidia-cudnn-cu12 (>=8.9)", "nvidia-cufft-cu12", "nvidia-cusolver-cu12", "nvidia-cusparse-cu12"]
-
 [package.source]
 type = "legacy"
 url = "https://storage.googleapis.com/jax-releases/jax_releases.html"
@@ -1971,13 +1991,13 @@ format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-
 
 [[package]]
 name = "jsonschema-specifications"
-version = "2023.12.1"
+version = "2024.10.1"
 description = "The JSON Schema meta-schemas and vocabularies, exposed as a Registry"
 optional = true
-python-versions = ">=3.8"
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 [package.dependencies]
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 python-versions = ">=3.8"
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 [package.dependencies]
@@ -2490,71 +2482,72 @@ testing = ["coverage", "pytest", "pytest-cov", "pytest-regressions"]
 
 [[package]]
 name = "markupsafe"
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 description = "Safely add untrusted strings to HTML/XML markup."
 optional = true
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 [[package]]
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 [package.dependencies]
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+    {file = "numpy-2.0.2-cp39-cp39-musllinux_1_1_x86_64.whl", hash = "sha256:5fec9451a7789926bcf7c2b8d187292c9f93ea30284802a0ab3f5be8ab36865d"},
+    {file = "numpy-2.0.2-cp39-cp39-musllinux_1_2_aarch64.whl", hash = "sha256:9189427407d88ff25ecf8f12469d4d39d35bee1db5d39fc5c168c6f088a6956d"},
+    {file = "numpy-2.0.2-cp39-cp39-win32.whl", hash = "sha256:905d16e0c60200656500c95b6b8dca5d109e23cb24abc701d41c02d74c6b3afa"},
+    {file = "numpy-2.0.2-cp39-cp39-win_amd64.whl", hash = "sha256:a3f4ab0caa7f053f6797fcd4e1e25caee367db3112ef2b6ef82d749530768c73"},
+    {file = "numpy-2.0.2-pp39-pypy39_pp73-macosx_10_9_x86_64.whl", hash = "sha256:7f0a0c6f12e07fa94133c8a67404322845220c06a9e80e85999afe727f7438b8"},
+    {file = "numpy-2.0.2-pp39-pypy39_pp73-macosx_14_0_x86_64.whl", hash = "sha256:312950fdd060354350ed123c0e25a71327d3711584beaef30cdaa93320c392d4"},
+    {file = "numpy-2.0.2-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:26df23238872200f63518dd2aa984cfca675d82469535dc7162dc2ee52d9dd5c"},
+    {file = "numpy-2.0.2-pp39-pypy39_pp73-win_amd64.whl", hash = "sha256:a46288ec55ebbd58947d31d72be2c63cbf839f0a63b49cb755022310792a3385"},
+    {file = "numpy-2.0.2.tar.gz", hash = "sha256:883c987dee1880e2a864ab0dc9892292582510604156762362d9326444636e78"},
 ]
 
 [[package]]
 name = "nvidia-cublas-cu12"
-version = "12.1.3.1"
+version = "12.4.5.8"
 description = "CUBLAS native runtime libraries"
 optional = true
 python-versions = ">=3"
 files = [
-    {file = "nvidia_cublas_cu12-12.1.3.1-py3-none-manylinux1_x86_64.whl", hash = "sha256:ee53ccca76a6fc08fb9701aa95b6ceb242cdaab118c3bb152af4e579af792728"},
-    {file = "nvidia_cublas_cu12-12.1.3.1-py3-none-win_amd64.whl", hash = "sha256:2b964d60e8cf11b5e1073d179d85fa340c120e99b3067558f3cf98dd69d02906"},
+    {file = "nvidia_cublas_cu12-12.4.5.8-py3-none-manylinux2014_aarch64.whl", hash = "sha256:0f8aa1706812e00b9f19dfe0cdb3999b092ccb8ca168c0db5b8ea712456fd9b3"},
+    {file = "nvidia_cublas_cu12-12.4.5.8-py3-none-manylinux2014_x86_64.whl", hash = "sha256:2fc8da60df463fdefa81e323eef2e36489e1c94335b5358bcb38360adf75ac9b"},
+    {file = "nvidia_cublas_cu12-12.4.5.8-py3-none-win_amd64.whl", hash = "sha256:5a796786da89203a0657eda402bcdcec6180254a8ac22d72213abc42069522dc"},
 ]
 
 [[package]]
 name = "nvidia-cuda-cupti-cu12"
-version = "12.1.105"
+version = "12.4.127"
 description = "CUDA profiling tools runtime libs."
 optional = true
 python-versions = ">=3"
 files = [
-    {file = "nvidia_cuda_cupti_cu12-12.1.105-py3-none-manylinux1_x86_64.whl", hash = "sha256:e54fde3983165c624cb79254ae9818a456eb6e87a7fd4d56a2352c24ee542d7e"},
-    {file = "nvidia_cuda_cupti_cu12-12.1.105-py3-none-win_amd64.whl", hash = "sha256:bea8236d13a0ac7190bd2919c3e8e6ce1e402104276e6f9694479e48bb0eb2a4"},
+    {file = "nvidia_cuda_cupti_cu12-12.4.127-py3-none-manylinux2014_aarch64.whl", hash = "sha256:79279b35cf6f91da114182a5ce1864997fd52294a87a16179ce275773799458a"},
+    {file = "nvidia_cuda_cupti_cu12-12.4.127-py3-none-manylinux2014_x86_64.whl", hash = "sha256:9dec60f5ac126f7bb551c055072b69d85392b13311fcc1bcda2202d172df30fb"},
+    {file = "nvidia_cuda_cupti_cu12-12.4.127-py3-none-win_amd64.whl", hash = "sha256:5688d203301ab051449a2b1cb6690fbe90d2b372f411521c86018b950f3d7922"},
 ]
 
 [[package]]
 name = "nvidia-cuda-nvrtc-cu12"
-version = "12.1.105"
+version = "12.4.127"
 description = "NVRTC native runtime libraries"
 optional = true
 python-versions = ">=3"
 files = [
-    {file = "nvidia_cuda_nvrtc_cu12-12.1.105-py3-none-manylinux1_x86_64.whl", hash = "sha256:339b385f50c309763ca65456ec75e17bbefcbbf2893f462cb8b90584cd27a1c2"},
-    {file = "nvidia_cuda_nvrtc_cu12-12.1.105-py3-none-win_amd64.whl", hash = "sha256:0a98a522d9ff138b96c010a65e145dc1b4850e9ecb75a0172371793752fd46ed"},
+    {file = "nvidia_cuda_nvrtc_cu12-12.4.127-py3-none-manylinux2014_aarch64.whl", hash = "sha256:0eedf14185e04b76aa05b1fea04133e59f465b6f960c0cbf4e37c3cb6b0ea198"},
+    {file = "nvidia_cuda_nvrtc_cu12-12.4.127-py3-none-manylinux2014_x86_64.whl", hash = "sha256:a178759ebb095827bd30ef56598ec182b85547f1508941a3d560eb7ea1fbf338"},
+    {file = "nvidia_cuda_nvrtc_cu12-12.4.127-py3-none-win_amd64.whl", hash = "sha256:a961b2f1d5f17b14867c619ceb99ef6fcec12e46612711bcec78eb05068a60ec"},
 ]
 
 [[package]]
 name = "nvidia-cuda-runtime-cu12"
-version = "12.1.105"
+version = "12.4.127"
 description = "CUDA Runtime native Libraries"
 optional = true
 python-versions = ">=3"
 files = [
-    {file = "nvidia_cuda_runtime_cu12-12.1.105-py3-none-manylinux1_x86_64.whl", hash = "sha256:6e258468ddf5796e25f1dc591a31029fa317d97a0a94ed93468fc86301d61e40"},
-    {file = "nvidia_cuda_runtime_cu12-12.1.105-py3-none-win_amd64.whl", hash = "sha256:dfb46ef84d73fababab44cf03e3b83f80700d27ca300e537f85f636fac474344"},
+    {file = "nvidia_cuda_runtime_cu12-12.4.127-py3-none-manylinux2014_aarch64.whl", hash = "sha256:961fe0e2e716a2a1d967aab7caee97512f71767f852f67432d572e36cb3a11f3"},
+    {file = "nvidia_cuda_runtime_cu12-12.4.127-py3-none-manylinux2014_x86_64.whl", hash = "sha256:64403288fa2136ee8e467cdc9c9427e0434110899d07c779f25b5c068934faa5"},
+    {file = "nvidia_cuda_runtime_cu12-12.4.127-py3-none-win_amd64.whl", hash = "sha256:09c2e35f48359752dfa822c09918211844a3d93c100a715d79b59591130c5e1e"},
 ]
 
 [[package]]
@@ -3227,35 +3233,41 @@ nvidia-cublas-cu12 = "*"
 
 [[package]]
 name = "nvidia-cufft-cu12"
-version = "11.0.2.54"
+version = "11.2.1.3"
 description = "CUFFT native runtime libraries"
 optional = true
 python-versions = ">=3"
 files = [
-    {file = "nvidia_cufft_cu12-11.0.2.54-py3-none-manylinux1_x86_64.whl", hash = "sha256:794e3948a1aa71fd817c3775866943936774d1c14e7628c74f6f7417224cdf56"},
-    {file = "nvidia_cufft_cu12-11.0.2.54-py3-none-win_amd64.whl", hash = "sha256:d9ac353f78ff89951da4af698f80870b1534ed69993f10a4cf1d96f21357e253"},
+    {file = "nvidia_cufft_cu12-11.2.1.3-py3-none-manylinux2014_aarch64.whl", hash = "sha256:5dad8008fc7f92f5ddfa2101430917ce2ffacd86824914c82e28990ad7f00399"},
+    {file = "nvidia_cufft_cu12-11.2.1.3-py3-none-manylinux2014_x86_64.whl", hash = "sha256:f083fc24912aa410be21fa16d157fed2055dab1cc4b6934a0e03cba69eb242b9"},
+    {file = "nvidia_cufft_cu12-11.2.1.3-py3-none-win_amd64.whl", hash = "sha256:d802f4954291101186078ccbe22fc285a902136f974d369540fd4a5333d1440b"},
 ]
 
+[package.dependencies]
+nvidia-nvjitlink-cu12 = "*"
+
 [[package]]
 name = "nvidia-curand-cu12"
-version = "10.3.2.106"
+version = "10.3.5.147"
 description = "CURAND native runtime libraries"
 optional = true
 python-versions = ">=3"
 files = [
-    {file = "nvidia_curand_cu12-10.3.2.106-py3-none-manylinux1_x86_64.whl", hash = "sha256:9d264c5036dde4e64f1de8c50ae753237c12e0b1348738169cd0f8a536c0e1e0"},
-    {file = "nvidia_curand_cu12-10.3.2.106-py3-none-win_amd64.whl", hash = "sha256:75b6b0c574c0037839121317e17fd01f8a69fd2ef8e25853d826fec30bdba74a"},
+    {file = "nvidia_curand_cu12-10.3.5.147-py3-none-manylinux2014_aarch64.whl", hash = "sha256:1f173f09e3e3c76ab084aba0de819c49e56614feae5c12f69883f4ae9bb5fad9"},
+    {file = "nvidia_curand_cu12-10.3.5.147-py3-none-manylinux2014_x86_64.whl", hash = "sha256:a88f583d4e0bb643c49743469964103aa59f7f708d862c3ddb0fc07f851e3b8b"},
+    {file = "nvidia_curand_cu12-10.3.5.147-py3-none-win_amd64.whl", hash = "sha256:f307cc191f96efe9e8f05a87096abc20d08845a841889ef78cb06924437f6771"},
 ]
 
 [[package]]
 name = "nvidia-cusolver-cu12"
-version = "11.4.5.107"
+version = "11.6.1.9"
 description = "CUDA solver native runtime libraries"
 optional = true
 python-versions = ">=3"
 files = [
-    {file = "nvidia_cusolver_cu12-11.4.5.107-py3-none-manylinux1_x86_64.whl", hash = "sha256:8a7ec542f0412294b15072fa7dab71d31334014a69f953004ea7a118206fe0dd"},
-    {file = "nvidia_cusolver_cu12-11.4.5.107-py3-none-win_amd64.whl", hash = "sha256:74e0c3a24c78612192a74fcd90dd117f1cf21dea4822e66d89e8ea80e3cd2da5"},
+    {file = "nvidia_cusolver_cu12-11.6.1.9-py3-none-manylinux2014_aarch64.whl", hash = "sha256:d338f155f174f90724bbde3758b7ac375a70ce8e706d70b018dd3375545fc84e"},
+    {file = "nvidia_cusolver_cu12-11.6.1.9-py3-none-manylinux2014_x86_64.whl", hash = "sha256:19e33fa442bcfd085b3086c4ebf7e8debc07cfe01e11513cc6d332fd918ac260"},
+    {file = "nvidia_cusolver_cu12-11.6.1.9-py3-none-win_amd64.whl", hash = "sha256:e77314c9d7b694fcebc84f58989f3aa4fb4cb442f12ca1a9bde50f5e8f6d1b9c"},
 ]
 
 [package.dependencies]
@@ -3265,13 +3277,14 @@ nvidia-nvjitlink-cu12 = "*"
 
 [[package]]
 name = "nvidia-cusparse-cu12"
-version = "12.1.0.106"
+version = "12.3.1.170"
 description = "CUSPARSE native runtime libraries"
 optional = true
 python-versions = ">=3"
 files = [
-    {file = "nvidia_cusparse_cu12-12.1.0.106-py3-none-manylinux1_x86_64.whl", hash = "sha256:f3b50f42cf363f86ab21f720998517a659a48131e8d538dc02f8768237bd884c"},
-    {file = "nvidia_cusparse_cu12-12.1.0.106-py3-none-win_amd64.whl", hash = "sha256:b798237e81b9719373e8fae8d4f091b70a0cf09d9d85c95a557e11df2d8e9a5a"},
+    {file = "nvidia_cusparse_cu12-12.3.1.170-py3-none-manylinux2014_aarch64.whl", hash = "sha256:9d32f62896231ebe0480efd8a7f702e143c98cfaa0e8a76df3386c1ba2b54df3"},
+    {file = "nvidia_cusparse_cu12-12.3.1.170-py3-none-manylinux2014_x86_64.whl", hash = "sha256:ea4f11a2904e2a8dc4b1833cc1b5181cde564edd0d5cd33e3c168eff2d1863f1"},
+    {file = "nvidia_cusparse_cu12-12.3.1.170-py3-none-win_amd64.whl", hash = "sha256:9bc90fb087bc7b4c15641521f31c0371e9a612fc2ba12c338d3ae032e6b6797f"},
 ]
 
 [package.dependencies]
@@ -3279,102 +3292,97 @@ nvidia-nvjitlink-cu12 = "*"
 
 [[package]]
 name = "nvidia-nccl-cu12"
-version = "2.20.5"
+version = "2.21.5"
 description = "NVIDIA Collective Communication Library (NCCL) Runtime"
 optional = true
 python-versions = ">=3"
 files = [
-    {file = "nvidia_nccl_cu12-2.20.5-py3-none-manylinux2014_aarch64.whl", hash = "sha256:1fc150d5c3250b170b29410ba682384b14581db722b2531b0d8d33c595f33d01"},
-    {file = "nvidia_nccl_cu12-2.20.5-py3-none-manylinux2014_x86_64.whl", hash = "sha256:057f6bf9685f75215d0c53bf3ac4a10b3e6578351de307abad9e18a99182af56"},
+    {file = "nvidia_nccl_cu12-2.21.5-py3-none-manylinux2014_x86_64.whl", hash = "sha256:8579076d30a8c24988834445f8d633c697d42397e92ffc3f63fa26766d25e0a0"},
 ]
 
 [[package]]
 name = "nvidia-nvjitlink-cu12"
-version = "12.6.68"
+version = "12.4.127"
 description = "Nvidia JIT LTO Library"
 optional = true
 python-versions = ">=3"
 files = [
-    {file = "nvidia_nvjitlink_cu12-12.6.68-py3-none-manylinux2014_aarch64.whl", hash = "sha256:b3fd0779845f68b92063ab1393abab1ed0a23412fc520df79a8190d098b5cd6b"},
-    {file = "nvidia_nvjitlink_cu12-12.6.68-py3-none-manylinux2014_x86_64.whl", hash = "sha256:125a6c2a44e96386dda634e13d944e60b07a0402d391a070e8fb4104b34ea1ab"},
-    {file = "nvidia_nvjitlink_cu12-12.6.68-py3-none-win_amd64.whl", hash = "sha256:a55744c98d70317c5e23db14866a8cc2b733f7324509e941fc96276f9f37801d"},
+    {file = "nvidia_nvjitlink_cu12-12.4.127-py3-none-manylinux2014_aarch64.whl", hash = "sha256:4abe7fef64914ccfa909bc2ba39739670ecc9e820c83ccc7a6ed414122599b83"},
+    {file = "nvidia_nvjitlink_cu12-12.4.127-py3-none-manylinux2014_x86_64.whl", hash = "sha256:06b3b9b25bf3f8af351d664978ca26a16d2c5127dbd53c0497e28d1fb9611d57"},
+    {file = "nvidia_nvjitlink_cu12-12.4.127-py3-none-win_amd64.whl", hash = "sha256:fd9020c501d27d135f983c6d3e244b197a7ccad769e34df53a42e276b0e25fa1"},
 ]
 
 [[package]]
 name = "nvidia-nvtx-cu12"
-version = "12.1.105"
+version = "12.4.127"
 description = "NVIDIA Tools Extension"
 optional = true
 python-versions = ">=3"
 files = [
-    {file = "nvidia_nvtx_cu12-12.1.105-py3-none-manylinux1_x86_64.whl", hash = "sha256:dc21cf308ca5691e7c04d962e213f8a4aa9bbfa23d95412f452254c2caeb09e5"},
-    {file = "nvidia_nvtx_cu12-12.1.105-py3-none-win_amd64.whl", hash = "sha256:65f4d98982b31b60026e0e6de73fbdfc09d08a96f4656dd3665ca616a11e1e82"},
+    {file = "nvidia_nvtx_cu12-12.4.127-py3-none-manylinux2014_aarch64.whl", hash = "sha256:7959ad635db13edf4fc65c06a6e9f9e55fc2f92596db928d169c0bb031e88ef3"},
+    {file = "nvidia_nvtx_cu12-12.4.127-py3-none-manylinux2014_x86_64.whl", hash = "sha256:781e950d9b9f60d8241ccea575b32f5105a5baf4c2351cab5256a24869f12a1a"},
+    {file = "nvidia_nvtx_cu12-12.4.127-py3-none-win_amd64.whl", hash = "sha256:641dccaaa1139f3ffb0d3164b4b84f9d253397e38246a4f2f36728b48566d485"},
 ]
 
 [[package]]
 name = "opt-einsum"
-version = "3.3.0"
-description = "Optimizing numpys einsum function"
+version = "3.4.0"
+description = "Path optimization of einsum functions."
 optional = true
-python-versions = ">=3.5"
+python-versions = ">=3.8"
 files = [
-    {file = "opt_einsum-3.3.0-py3-none-any.whl", hash = "sha256:2455e59e3947d3c275477df7f5205b30635e266fe6dc300e3d9f9646bfcea147"},
-    {file = "opt_einsum-3.3.0.tar.gz", hash = "sha256:59f6475f77bbc37dcf7cd748519c0ec60722e91e63ca114e68821c0c54a46549"},
+    {file = "opt_einsum-3.4.0-py3-none-any.whl", hash = "sha256:69bb92469f86a1565195ece4ac0323943e83477171b91d24c35afe028a90d7cd"},
+    {file = "opt_einsum-3.4.0.tar.gz", hash = "sha256:96ca72f1b886d148241348783498194c577fa30a8faac108586b14f1ba4473ac"},
 ]
 
-[package.dependencies]
-numpy = ">=1.7"
-
-[package.extras]
-docs = ["numpydoc", "sphinx (==1.2.3)", "sphinx-rtd-theme", "sphinxcontrib-napoleon"]
-tests = ["pytest", "pytest-cov", "pytest-pep8"]
-
 [[package]]
 name = "optax"
-version = "0.2.2"
+version = "0.2.3"
 description = "A gradient processing and optimisation library in JAX."
 optional = true
 python-versions = ">=3.9"
 files = [
-    {file = "optax-0.2.2-py3-none-any.whl", hash = "sha256:411c414a76aae259f4191a60b712663968741a5163ca92fc250b5d5c7d36fb57"},
-    {file = "optax-0.2.2.tar.gz", hash = "sha256:f09bf790ef4b09fb9c35f79a07594c6196a719919985f542dc84b0bf97812e0e"},
+    {file = "optax-0.2.3-py3-none-any.whl", hash = "sha256:083e603dcd731d7e74d99f71c12f77937dd53f79001b4c09c290e4f47dd2e94f"},
+    {file = "optax-0.2.3.tar.gz", hash = "sha256:ec7ab925440b0c5a512e1f24fba0fb3e7d760a7fd5d2496d7a691e9d37da01d9"},
 ]
 
 [package.dependencies]
 absl-py = ">=0.7.1"
 chex = ">=0.1.86"
-jax = ">=0.1.55"
-jaxlib = ">=0.1.37"
+etils = {version = "*", extras = ["epy"]}
+jax = ">=0.4.27"
+jaxlib = ">=0.4.27"
 numpy = ">=1.18.0"
 
 [package.extras]
 docs = ["flax", "ipython (>=8.8.0)", "matplotlib (>=3.5.0)", "myst-nb (>=1.0.0)", "sphinx (>=6.0.0)", "sphinx-autodoc-typehints", "sphinx-book-theme (>=1.0.1)", "sphinx-collections (>=0.0.1)", "sphinx-gallery (>=0.14.0)", "sphinx_contributors", "sphinxcontrib-katex", "tensorflow (>=2.4.0)", "tensorflow-datasets (>=4.2.0)"]
 dp-accounting = ["absl-py (>=1.0.0)", "attrs (>=21.4.0)", "mpmath (>=1.2.1)", "numpy (>=1.21.4)", "scipy (>=1.7.1)"]
-examples = ["dp_accounting (>=0.4)", "flax", "tensorflow (>=2.4.0)", "tensorflow-datasets (>=4.2.0)"]
-test = ["dm-tree (>=0.1.7)", "flax (>=0.5.3)"]
+examples = ["dp_accounting (>=0.4)", "flax", "ipywidgets", "tensorflow (>=2.4.0)", "tensorflow-datasets (>=4.2.0)"]
+test = ["dm-tree (>=0.1.7)", "flax (>=0.5.3)", "scikit-learn", "scipy (>=1.7.1)"]
 
 [[package]]
 name = "orbax-checkpoint"
-version = "0.5.18"
+version = "0.6.4"
 description = "Orbax Checkpoint"
 optional = true
 python-versions = ">=3.9"
 files = [
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 [package.dependencies]
 absl-py = "*"
 etils = {version = "*", extras = ["epath", "epy"]}
-jax = ">=0.4.25"
+humanize = "*"
+jax = ">=0.4.26"
 jaxlib = "*"
 msgpack = "*"
 nest_asyncio = "*"
 numpy = "*"
 protobuf = "*"
 pyyaml = "*"
-tensorstore = ">=0.1.51"
+tensorstore = ">=0.1.60"
 typing_extensions = "*"
 
 [package.extras]
@@ -3382,68 +3390,69 @@ testing = ["flax", "google-cloud-logging", "mock", "pytest", "pytest-xdist"]
 
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 [package.dependencies]
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 python-dateutil = ">=2.8.2"
 pytz = ">=2020.1"
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 [package.extras]
-test = ["enum34", "ipaddress", "mock", "pywin32", "wmi"]
+dev = ["black", "check-manifest", "coverage", "packaging", "pylint", "pyperf", "pypinfo", "pytest-cov", "requests", "rstcheck", "ruff", "sphinx", "sphinx_rtd_theme", "toml-sort", "twine", "virtualenv", "wheel"]
+test = ["pytest", "pytest-xdist", "setuptools"]
 
 [[package]]
 name = "ptyprocess"
@@ -3898,8 +3916,8 @@ files = [
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 pydantic-core = "2.23.4"
 typing-extensions = [
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     {version = ">=4.6.1", markers = "python_version < \"3.13\""},
+    {version = ">=4.12.2", markers = "python_version >= \"3.13\""},
 ]
 
 [package.extras]
@@ -4009,13 +4027,13 @@ typing-extensions = ">=4.6.0,<4.7.0 || >4.7.0"
 
 [[package]]
 name = "pydantic-settings"
-version = "2.5.2"
+version = "2.6.0"
 description = "Settings management using Pydantic"
 optional = true
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.dependencies]
@@ -4029,13 +4047,13 @@ yaml = ["pyyaml (>=6.0.1)"]
 
 [[package]]
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+version = "0.16.0"
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 optional = true
 python-versions = ">=3.9"
 files = [
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 [package.dependencies]
@@ -4043,9 +4061,8 @@ accessible-pygments = "*"
 Babel = "*"
 beautifulsoup4 = "*"
 docutils = "!=0.17.0"
-packaging = "*"
 pygments = ">=2.7"
-sphinx = ">=5"
+sphinx = ">=6.1"
 typing-extensions = "*"
 
 [package.extras]
@@ -4101,9 +4118,9 @@ files = [
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 colorama = {version = ">=0.4.5", markers = "sys_platform == \"win32\""}
 dill = [
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 isort = ">=4.2.5,<5.13.0 || >5.13.0,<6"
 mccabe = ">=0.6,<0.8"
@@ -4118,13 +4135,13 @@ testutils = ["gitpython (>3)"]
 
 [[package]]
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+version = "3.2.0"
 description = "pyparsing module - Classes and methods to define and execute parsing grammars"
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 ]
 
 [package.extras]
@@ -4271,40 +4288,44 @@ files = [
 
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+version = "2.0.14"
 description = "Pseudo terminal support for Windows from Python."
 optional = true
 python-versions = ">=3.8"
 files = [
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 ]
 
 [[package]]
@@ -4589,18 +4610,19 @@ files = [
 
 [[package]]
 name = "rich"
-version = "13.8.1"
+version = "13.9.3"
 description = "Render rich text, tables, progress bars, syntax highlighting, markdown and more to the terminal"
 optional = false
-python-versions = ">=3.7.0"
+python-versions = ">=3.8.0"
 files = [
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+    {file = "rich-13.9.3.tar.gz", hash = "sha256:bc1e01b899537598cf02579d2b9f4a415104d3fc439313a7a2c165d76557a08e"},
 ]
 
 [package.dependencies]
 markdown-it-py = ">=2.2.0"
 pygments = ">=2.13.0,<3.0.0"
+typing-extensions = {version = ">=4.0.0,<5.0", markers = "python_version < \"3.11\""}
 
 [package.extras]
 jupyter = ["ipywidgets (>=7.5.1,<9)"]
@@ -4785,13 +4807,13 @@ files = [
 
 [[package]]
 name = "s3transfer"
-version = "0.10.2"
+version = "0.10.3"
 description = "An Amazon S3 Transfer Manager"
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.dependencies]
@@ -4916,23 +4938,23 @@ win32 = ["pywin32"]
 
 [[package]]
 name = "setuptools"
-version = "75.1.0"
+version = "75.3.0"
 description = "Easily download, build, install, upgrade, and uninstall Python packages"
 optional = true
 python-versions = ">=3.8"
 files = [
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 [package.extras]
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+core = ["importlib-metadata (>=6)", "importlib-resources (>=5.10.2)", "jaraco.collections", "jaraco.functools", "jaraco.text (>=3.7)", "more-itertools", "more-itertools (>=8.8)", "packaging", "packaging (>=24)", "platformdirs (>=4.2.2)", "tomli (>=2.0.1)", "wheel (>=0.43.0)"]
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-type = ["importlib-metadata (>=7.0.2)", "jaraco.develop (>=7.21)", "mypy (==1.11.*)", "pytest-mypy"]
+test = ["build[virtualenv] (>=1.0.3)", "filelock (>=3.4.0)", "ini2toml[lite] (>=0.14)", "jaraco.develop (>=7.21)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "jaraco.test (>=5.5)", "packaging (>=23.2)", "pip (>=19.1)", "pyproject-hooks (!=1.1)", "pytest (>=6,!=8.1.*)", "pytest-home (>=0.5)", "pytest-perf", "pytest-subprocess", "pytest-timeout", "pytest-xdist (>=3)", "tomli-w (>=1.0.0)", "virtualenv (>=13.0.0)", "wheel (>=0.44.0)"]
+type = ["importlib-metadata (>=7.0.2)", "jaraco.develop (>=7.21)", "mypy (==1.12.*)", "pytest-mypy"]
 
 [[package]]
 name = "shapely"
@@ -5197,19 +5219,19 @@ dev = ["build", "flake8", "pre-commit", "pytest", "sphinx", "tox"]
 
 [[package]]
 name = "sphinx-tabs"
-version = "3.4.5"
+version = "3.4.7"
 description = "Tabbed views for Sphinx"
 optional = true
-python-versions = "~=3.7"
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 files = [
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 ]
 
 [package.dependencies]
 docutils = "*"
 pygments = "*"
-sphinx = "*"
+sphinx = ">=1.8"
 
 [package.extras]
 code-style = ["pre-commit (==2.13.0)"]
@@ -5344,13 +5366,13 @@ tests = ["cython", "littleutils", "pygments", "pytest", "typeguard"]
 
 [[package]]
 name = "sympy"
-version = "1.13.3"
+version = "1.13.1"
 description = "Computer algebra system (CAS) in Python"
 optional = true
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.dependencies]
@@ -5377,32 +5399,32 @@ zarr = ["zarr"]
 
 [[package]]
 name = "tensorstore"
-version = "0.1.66"
+version = "0.1.67"
 description = "Read and write large, multi-dimensional arrays"
 optional = true
 python-versions = ">=3.9"
 files = [
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 ]
 
 [package.dependencies]
@@ -5432,13 +5454,13 @@ typing = ["mypy (>=1.6,<2.0)", "traitlets (>=5.11.1)"]
 
 [[package]]
 name = "tinycss2"
-version = "1.3.0"
+version = "1.4.0"
 description = "A tiny CSS parser"
 optional = true
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.dependencies]
@@ -5471,13 +5493,13 @@ files = [
 
 [[package]]
 name = "tomli"
-version = "2.0.1"
+version = "2.0.2"
 description = "A lil' TOML parser"
 optional = true
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
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 ]
 
 [[package]]
@@ -5493,42 +5515,39 @@ files = [
 
 [[package]]
 name = "toolz"
-version = "0.12.1"
+version = "1.0.0"
 description = "List processing tools and functional utilities"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
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 ]
 
 [[package]]
 name = "torch"
-version = "2.4.1"
+version = "2.5.1"
 description = "Tensors and Dynamic neural networks in Python with strong GPU acceleration"
 optional = true
 python-versions = ">=3.8.0"
 files = [
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+    {file = "torch-2.5.1-cp39-cp39-win_amd64.whl", hash = "sha256:46c817d3ea33696ad3b9df5e774dba2257e9a4cd3c4a3afbf92f6bb13ac5ce2d"},
+    {file = "torch-2.5.1-cp39-none-macosx_11_0_arm64.whl", hash = "sha256:8046768b7f6d35b85d101b4b38cba8aa2f3cd51952bc4c06a49580f2ce682291"},
 ]
 
 [package.dependencies]
@@ -5536,43 +5555,43 @@ filelock = "*"
 fsspec = "*"
 jinja2 = "*"
 networkx = "*"
-nvidia-cublas-cu12 = {version = "12.1.3.1", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
-nvidia-cuda-cupti-cu12 = {version = "12.1.105", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
-nvidia-cuda-nvrtc-cu12 = {version = "12.1.105", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
-nvidia-cuda-runtime-cu12 = {version = "12.1.105", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
+nvidia-cublas-cu12 = {version = "12.4.5.8", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
+nvidia-cuda-cupti-cu12 = {version = "12.4.127", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
+nvidia-cuda-nvrtc-cu12 = {version = "12.4.127", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
+nvidia-cuda-runtime-cu12 = {version = "12.4.127", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
 nvidia-cudnn-cu12 = {version = "9.1.0.70", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
-nvidia-cufft-cu12 = {version = "11.0.2.54", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
-nvidia-curand-cu12 = {version = "10.3.2.106", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
-nvidia-cusolver-cu12 = {version = "11.4.5.107", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
-nvidia-cusparse-cu12 = {version = "12.1.0.106", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
-nvidia-nccl-cu12 = {version = "2.20.5", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
-nvidia-nvtx-cu12 = {version = "12.1.105", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
-setuptools = "*"
-sympy = "*"
-triton = {version = "3.0.0", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\" and python_version < \"3.13\""}
+nvidia-cufft-cu12 = {version = "11.2.1.3", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
+nvidia-curand-cu12 = {version = "10.3.5.147", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
+nvidia-cusolver-cu12 = {version = "11.6.1.9", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
+nvidia-cusparse-cu12 = {version = "12.3.1.170", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
+nvidia-nccl-cu12 = {version = "2.21.5", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
+nvidia-nvjitlink-cu12 = {version = "12.4.127", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
+nvidia-nvtx-cu12 = {version = "12.4.127", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
+setuptools = {version = "*", markers = "python_version >= \"3.12\""}
+sympy = {version = "1.13.1", markers = "python_version >= \"3.9\""}
+triton = {version = "3.1.0", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\" and python_version < \"3.13\""}
 typing-extensions = ">=4.8.0"
 
 [package.extras]
 opt-einsum = ["opt-einsum (>=3.3)"]
-optree = ["optree (>=0.11.0)"]
+optree = ["optree (>=0.12.0)"]
 
 [[package]]
 name = "torch"
-version = "2.4.1+cpu"
+version = "2.5.1+cpu"
 description = "Tensors and Dynamic neural networks in Python with strong GPU acceleration"
 optional = true
 python-versions = ">=3.8.0"
 files = [
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+    {file = "torch-2.5.1+cpu-cp310-cp310-linux_x86_64.whl", hash = "sha256:7f91a2200e352745d70e22396bd501448e28350fbdbd8d8b1c83037e25451150"},
+    {file = "torch-2.5.1+cpu-cp310-cp310-win_amd64.whl", hash = "sha256:df93157482b672892d29134d3fae9d38ba3219702faedd79f407eb36774c56ce"},
+    {file = "torch-2.5.1+cpu-cp311-cp311-linux_x86_64.whl", hash = "sha256:07d7c9e069123d5af08b0cf0013d74f680b2d8be7d9e2cf561a52c90c55d9409"},
+    {file = "torch-2.5.1+cpu-cp311-cp311-win_amd64.whl", hash = "sha256:81531d4d5ca74163dc9574b87396531e546a60cceb6253303c7db6a21e867fdf"},
+    {file = "torch-2.5.1+cpu-cp312-cp312-linux_x86_64.whl", hash = "sha256:4856f9d6925121d13c2df07aa7580b767f449dfe71ae5acde9c27535d5da4840"},
+    {file = "torch-2.5.1+cpu-cp312-cp312-win_amd64.whl", hash = "sha256:a6b720410350765d3d77c01a5ce098a6c45af446284e45e87a98b8a16e7d564d"},
+    {file = "torch-2.5.1+cpu-cp313-cp313-linux_x86_64.whl", hash = "sha256:5dbbdf83caa90d0bcaa50e4933ca424889133b35226db79000877d4ec5d9ea37"},
+    {file = "torch-2.5.1+cpu-cp39-cp39-linux_x86_64.whl", hash = "sha256:a3ad26468abc5ee601aba49ff02f72387ae734b0900aa589b890c80d72b7b26b"},
+    {file = "torch-2.5.1+cpu-cp39-cp39-win_amd64.whl", hash = "sha256:2ebd0b6135dc60b96ce51349c92c9757b2b9634a6b90045dfab3eb4921a4d62f"},
 ]
 
 [package.dependencies]
@@ -5580,12 +5599,13 @@ filelock = "*"
 fsspec = "*"
 jinja2 = "*"
 networkx = "*"
-sympy = "*"
+setuptools = {version = "*", markers = "python_version >= \"3.12\""}
+sympy = {version = "1.13.1", markers = "python_version >= \"3.9\""}
 typing-extensions = ">=4.8.0"
 
 [package.extras]
 opt-einsum = ["opt-einsum (>=3.3)"]
-optree = ["optree (>=0.11.0)"]
+optree = ["optree (>=0.12.0)"]
 
 [package.source]
 type = "legacy"
@@ -5614,40 +5634,40 @@ files = [
 
 [[package]]
 name = "tox"
-version = "4.20.0"
+version = "4.23.2"
 description = "tox is a generic virtualenv management and test command line tool"
 optional = true
 python-versions = ">=3.8"
 files = [
-    {file = "tox-4.20.0-py3-none-any.whl", hash = "sha256:21a8005e3d3fe5658a8e36b8ca3ed13a4230429063c5cc2a2fdac6ee5aa0de34"},
-    {file = "tox-4.20.0.tar.gz", hash = "sha256:5b78a49b6eaaeab3ae4186415e7c97d524f762ae967c63562687c3e5f0ec23d5"},
+    {file = "tox-4.23.2-py3-none-any.whl", hash = "sha256:452bc32bb031f2282881a2118923176445bac783ab97c874b8770ab4c3b76c38"},
+    {file = "tox-4.23.2.tar.gz", hash = "sha256:86075e00e555df6e82e74cfc333917f91ecb47ffbc868dcafbd2672e332f4a2c"},
 ]
 
 [package.dependencies]
 cachetools = ">=5.5"
 chardet = ">=5.2"
 colorama = ">=0.4.6"
-filelock = ">=3.15.4"
+filelock = ">=3.16.1"
 packaging = ">=24.1"
-platformdirs = ">=4.2.2"
+platformdirs = ">=4.3.6"
 pluggy = ">=1.5"
-pyproject-api = ">=1.7.1"
+pyproject-api = ">=1.8"
 tomli = {version = ">=2.0.1", markers = "python_version < \"3.11\""}
-virtualenv = ">=20.26.3"
+typing-extensions = {version = ">=4.12.2", markers = "python_version < \"3.11\""}
+virtualenv = ">=20.26.6"
 
 [package.extras]
-docs = ["furo (>=2024.8.6)", "sphinx (>=8.0.2)", "sphinx-argparse-cli (>=1.17)", "sphinx-autodoc-typehints (>=2.4)", "sphinx-copybutton (>=0.5.2)", "sphinx-inline-tabs (>=2023.4.21)", "sphinxcontrib-towncrier (>=0.2.1a0)", "towncrier (>=24.8)"]
-testing = ["build[virtualenv] (>=1.2.2)", "covdefaults (>=2.3)", "detect-test-pollution (>=1.2)", "devpi-process (>=1)", "diff-cover (>=9.1.1)", "distlib (>=0.3.8)", "flaky (>=3.8.1)", "hatch-vcs (>=0.4)", "hatchling (>=1.25)", "psutil (>=6)", "pytest (>=8.3.2)", "pytest-cov (>=5)", "pytest-mock (>=3.14)", "pytest-xdist (>=3.6.1)", "re-assert (>=1.1)", "setuptools (>=74.1.2)", "time-machine (>=2.15)", "wheel (>=0.44)"]
+test = ["devpi-process (>=1.0.2)", "pytest (>=8.3.3)", "pytest-mock (>=3.14)"]
 
 [[package]]
 name = "tqdm"
-version = "4.66.5"
+version = "4.66.6"
 description = "Fast, Extensible Progress Meter"
 optional = true
 python-versions = ">=3.7"
 files = [
-    {file = "tqdm-4.66.5-py3-none-any.whl", hash = "sha256:90279a3770753eafc9194a0364852159802111925aa30eb3f9d85b0e805ac7cd"},
-    {file = "tqdm-4.66.5.tar.gz", hash = "sha256:e1020aef2e5096702d8a025ac7d16b1577279c9d63f8375b63083e9a5f0fcbad"},
+    {file = "tqdm-4.66.6-py3-none-any.whl", hash = "sha256:223e8b5359c2efc4b30555531f09e9f2f3589bcd7fdd389271191031b49b7a63"},
+    {file = "tqdm-4.66.6.tar.gz", hash = "sha256:4bdd694238bef1485ce839d67967ab50af8f9272aab687c0d7702a01da0be090"},
 ]
 
 [package.dependencies]
@@ -5676,37 +5696,38 @@ test = ["argcomplete (>=3.0.3)", "mypy (>=1.7.0)", "pre-commit", "pytest (>=7.0,
 
 [[package]]
 name = "trimesh"
-version = "4.4.9"
+version = "4.5.1"
 description = "Import, export, process, analyze and view triangular meshes."
 optional = true
 python-versions = ">=3.8"
 files = [
-    {file = "trimesh-4.4.9-py3-none-any.whl", hash = "sha256:386ddbbb13502e9669deb0a91ea1140d3da1d65326e402c0a16cb737d8c3c704"},
-    {file = "trimesh-4.4.9.tar.gz", hash = "sha256:e9f54cb4ef70f9db49446cad3845b7a8043fc7d62d9192b241741f3fb0d813ac"},
+    {file = "trimesh-4.5.1-py3-none-any.whl", hash = "sha256:fe2ddcf5b091e4d93bb7b689b947b84ad7a62ca862225f2c70cef1caaac4bd32"},
+    {file = "trimesh-4.5.1.tar.gz", hash = "sha256:2e85179fdbee1e872aa00d42a5b28605a05302968857a8321a4dfa4390725b1c"},
 ]
 
 [package.dependencies]
 numpy = ">=1.20"
 
 [package.extras]
-all = ["trimesh[deprecated,easy,recommend,test]"]
+all = ["trimesh[deprecated,easy,recommend,test,test-more]"]
 deprecated = ["gmsh (==4.12.2)"]
 easy = ["chardet", "colorlog", "embreex", "httpx", "jsonschema", "lxml", "manifold3d (>=2.3.0)", "mapbox-earcut (>=1.0.2)", "networkx", "pillow", "pycollada", "rtree", "scipy", "setuptools", "shapely", "svg.path", "vhacdx", "xatlas", "xxhash"]
-recommend = ["cascadio", "fast-simplification", "glooey", "meshio", "openctm", "psutil", "pyglet (<2)", "scikit-image", "sympy"]
-test = ["coveralls", "ezdxf", "matplotlib", "pyinstrument", "pymeshlab", "pyright", "pytest", "pytest-beartype", "pytest-cov", "ruff"]
+recommend = ["cascadio", "fast-simplification", "meshio", "openctm", "psutil", "pyglet (<2)", "scikit-image", "sympy"]
+test = ["pyinstrument", "pytest", "pytest-cov", "ruff"]
+test-more = ["coveralls", "ezdxf", "matplotlib", "pymeshlab", "pyright", "pytest-beartype", "triangle"]
 
 [[package]]
 name = "triton"
-version = "3.0.0"
+version = "3.1.0"
 description = "A language and compiler for custom Deep Learning operations"
 optional = true
 python-versions = "*"
 files = [
-    {file = "triton-3.0.0-1-cp310-cp310-manylinux2014_x86_64.manylinux_2_17_x86_64.whl", hash = "sha256:e1efef76935b2febc365bfadf74bcb65a6f959a9872e5bddf44cc9e0adce1e1a"},
-    {file = "triton-3.0.0-1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl", hash = "sha256:5ce8520437c602fb633f1324cc3871c47bee3b67acf9756c1a66309b60e3216c"},
-    {file = "triton-3.0.0-1-cp312-cp312-manylinux2014_x86_64.manylinux_2_17_x86_64.whl", hash = "sha256:34e509deb77f1c067d8640725ef00c5cbfcb2052a1a3cb6a6d343841f92624eb"},
-    {file = "triton-3.0.0-1-cp38-cp38-manylinux2014_x86_64.manylinux_2_17_x86_64.whl", hash = "sha256:bcbf3b1c48af6a28011a5c40a5b3b9b5330530c3827716b5fbf6d7adcc1e53e9"},
-    {file = "triton-3.0.0-1-cp39-cp39-manylinux2014_x86_64.manylinux_2_17_x86_64.whl", hash = "sha256:6e5727202f7078c56f91ff13ad0c1abab14a0e7f2c87e91b12b6f64f3e8ae609"},
+    {file = "triton-3.1.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:6b0dd10a925263abbe9fa37dcde67a5e9b2383fc269fdf59f5657cac38c5d1d8"},
+    {file = "triton-3.1.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:0f34f6e7885d1bf0eaaf7ba875a5f0ce6f3c13ba98f9503651c1e6dc6757ed5c"},
+    {file = "triton-3.1.0-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:c8182f42fd8080a7d39d666814fa36c5e30cc00ea7eeeb1a2983dbb4c99a0fdc"},
+    {file = "triton-3.1.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:6dadaca7fc24de34e180271b5cf864c16755702e9f63a16f62df714a8099126a"},
+    {file = "triton-3.1.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:aafa9a20cd0d9fee523cd4504aa7131807a864cd77dcf6efe7e981f18b8c6c11"},
 ]
 
 [package.dependencies]
@@ -5734,13 +5755,13 @@ test = ["mypy", "pytest", "typing-extensions"]
 
 [[package]]
 name = "types-python-dateutil"
-version = "2.9.0.20240906"
+version = "2.9.0.20241003"
 description = "Typing stubs for python-dateutil"
 optional = true
 python-versions = ">=3.8"
 files = [
-    {file = "types-python-dateutil-2.9.0.20240906.tar.gz", hash = "sha256:9706c3b68284c25adffc47319ecc7947e5bb86b3773f843c73906fd598bc176e"},
-    {file = "types_python_dateutil-2.9.0.20240906-py3-none-any.whl", hash = "sha256:27c8cc2d058ccb14946eebcaaa503088f4f6dbc4fb6093d3d456a49aef2753f6"},
+    {file = "types-python-dateutil-2.9.0.20241003.tar.gz", hash = "sha256:58cb85449b2a56d6684e41aeefb4c4280631246a0da1a719bdbe6f3fb0317446"},
+    {file = "types_python_dateutil-2.9.0.20241003-py3-none-any.whl", hash = "sha256:250e1d8e80e7bbc3a6c99b907762711d1a1cdd00e978ad39cb5940f6f0a87f3d"},
 ]
 
 [[package]]
@@ -5814,13 +5835,13 @@ zstd = ["zstandard (>=0.18.0)"]
 
 [[package]]
 name = "virtualenv"
-version = "20.26.5"
+version = "20.27.1"
 description = "Virtual Python Environment builder"
 optional = true
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "virtualenv-20.26.5-py3-none-any.whl", hash = "sha256:4f3ac17b81fba3ce3bd6f4ead2749a72da5929c01774948e243db9ba41df4ff6"},
-    {file = "virtualenv-20.26.5.tar.gz", hash = "sha256:ce489cac131aa58f4b25e321d6d186171f78e6cb13fafbf32a840cee67733ff4"},
+    {file = "virtualenv-20.27.1-py3-none-any.whl", hash = "sha256:f11f1b8a29525562925f745563bfd48b189450f61fb34c4f9cc79dd5aa32a1f4"},
+    {file = "virtualenv-20.27.1.tar.gz", hash = "sha256:142c6be10212543b32c6c45d3d3893dff89112cc588b7d0879ae5a1ec03a47ba"},
 ]
 
 [package.dependencies]
@@ -5875,13 +5896,13 @@ web = ["wslink (>=1.0.4)"]
 
 [[package]]
 name = "wcmatch"
-version = "9.0"
+version = "10.0"
 description = "Wildcard/glob file name matcher."
 optional = true
 python-versions = ">=3.8"
 files = [
-    {file = "wcmatch-9.0-py3-none-any.whl", hash = "sha256:af25922e2b6dbd1550fa37a4c8de7dd558d6c1bb330c641de9b907b9776cb3c4"},
-    {file = "wcmatch-9.0.tar.gz", hash = "sha256:567d66b11ad74384954c8af86f607857c3bdf93682349ad32066231abd556c92"},
+    {file = "wcmatch-10.0-py3-none-any.whl", hash = "sha256:0dd927072d03c0a6527a20d2e6ad5ba8d0380e60870c383bc533b71744df7b7a"},
+    {file = "wcmatch-10.0.tar.gz", hash = "sha256:e72f0de09bba6a04e0de70937b0cf06e55f36f37b3deb422dfaf854b867b840a"},
 ]
 
 [package.dependencies]
@@ -6000,6 +6021,7 @@ docs = ["cma", "devsim", "gdstk", "grcwa", "ipython", "jinja2", "jupyter", "myst
 gdspy = ["gdspy"]
 gdstk = ["gdstk"]
 jax = ["jax", "jaxlib"]
+ruff = ["ruff"]
 scikit-rf = ["scikit-rf"]
 trimesh = ["networkx", "rtree", "trimesh"]
 vtk = ["vtk"]
@@ -6007,4 +6029,4 @@ vtk = ["vtk"]
 [metadata]
 lock-version = "2.0"
 python-versions = ">=3.9,<4.0.0"
-content-hash = "7a3971cb9394efd01b8c18cc304fb5d8b31ceb181434676588a5fdd765aebf9f"
+content-hash = "3db934000d2dd3d5b7574a2adcb2baf72851e12e934309dd628a176b160435da"
diff --git a/pyproject.toml b/pyproject.toml
index 688f18d95..eea087581 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -28,15 +28,15 @@ importlib-metadata = ">=6.0.0"
 h5netcdf = "1.0.2"
 h5py = "^3.0.0"
 rich = "^13.0"
-numpy = "<2"
+numpy = "*"
 matplotlib = "*"
 shapely = "^2.0"
-pandas = "<=2.2.1"
+pandas = "*"
 pydantic = "^2.0"
 PyYAML = "*"
 dask = "*"
 toml = "*"
-autograd = "1.6.2"
+autograd = ">=1.7.0"
 scipy = "*"
 ### NOT CORE
 boto3 = "^1.28.0"
@@ -65,11 +65,11 @@ tox = { version = "*", optional = true }
 gdspy = { version = "*", optional = true }
 
 # gdstk
-gdstk = { version = ">=0.9.49, <0.9.52", optional = true }
+gdstk = { version = ">=0.9.49", optional = true }
 
 # jax
-jaxlib = { version = "0.4.25", source = "jaxsource", optional = true }
-jax = { version = "0.4.25", extras = [
+jaxlib = { version = ">=0.4.25", source = "jaxsource", optional = true }
+jax = { version = ">=0.4.25", extras = [
   "cpu",
 ], source = "jaxsource", optional = true }
 
@@ -199,6 +199,7 @@ jax = ["jaxlib", "jax"]
 scikit-rf = ["scikit-rf"]
 trimesh = ["trimesh", "networkx", "rtree"]
 vtk = ["vtk"]
+ruff = ["ruff"]
 
 [tool.poetry.scripts]
 tidy3d = "tidy3d.web.cli:tidy3d_cli"
diff --git a/tests/utils.py b/tests/utils.py
index 11c6718bb..9e7a7c9c7 100644
--- a/tests/utils.py
+++ b/tests/utils.py
@@ -96,7 +96,7 @@ def cartesian_to_unstructured(
 
     shape = np.shape(XYZ[0])
 
-    XYZp = XYZ.copy()
+    XYZp = np.array(XYZ).copy()
     rng = np.random.default_rng(seed=seed)
 
     x_pert = (1 - 2 * rng.random(shape)) * pert
diff --git a/tidy3d/packaging.py b/tidy3d/packaging.py
index fd4d17b6e..43aeb8d4d 100644
--- a/tidy3d/packaging.py
+++ b/tidy3d/packaging.py
@@ -150,3 +150,26 @@ def _fn(*args, **kwargs):
         return fn(*args, **kwargs)
 
     return _fn
+
+
+def get_numpy_major_version(module=np):
+    """
+    Extracts the major version of the installed numpy accordingly.
+
+    Parameters
+    ----------
+    module : module
+        The module to extract the version from. Default is numpy.
+
+    Returns
+    -------
+    int
+        The major version of the module.
+    """
+    # Get the version of the module
+    module_version = module.__version__
+
+    # Extract the major version number
+    major_version = int(module_version.split(".")[0])
+
+    return major_version