diff --git a/src/main/java/genepi/imputationserver/steps/FastQualityControl.java b/src/main/java/genepi/imputationserver/steps/FastQualityControl.java index 5456093b..c7f7ba40 100644 --- a/src/main/java/genepi/imputationserver/steps/FastQualityControl.java +++ b/src/main/java/genepi/imputationserver/steps/FastQualityControl.java @@ -340,7 +340,7 @@ else if (task.getStrandFlipSimple() + task.getStrandFlipAndAlleleSwitch() > stra // Check if too many allele switches are detected else if (task.getAlleleSwitch() > alleleSwitches) { text.append("
Error: More than " + alleleSwitches - + " allele switches have been detected. Imputation cannot be started!"); + + " allele switches have been detected. Instructions to solve this issue can be found in our documentation. Imputation cannot be started!"); context.error(text.toString()); return false;