diff --git a/files/imputationserver-beagle.yaml b/files/imputationserver-beagle.yaml index 5e7e46b8..9d395d11 100644 --- a/files/imputationserver-beagle.yaml +++ b/files/imputationserver-beagle.yaml @@ -1,7 +1,7 @@ id: imputationserver-beagle name: Genotype Imputation supporting Beagle (Minimac4) description: This is the new Michigan Imputation Server Pipeline using Minimac4. Documentation can be found here.

If your input data is GRCh37/hg19 please ensure chromosomes are encoded without prefix (e.g. 20).
If your input data is GRCh38hg38 please ensure chromosomes are encoded with prefix 'chr' (e.g. chr20). -version: 1.8.0-beta1 +version: 1.8.0-beta2 website: https://imputationserver.readthedocs.io category: diff --git a/files/imputationserver-hla.yaml b/files/imputationserver-hla.yaml index 7313ad9f..521ce1aa 100644 --- a/files/imputationserver-hla.yaml +++ b/files/imputationserver-hla.yaml @@ -1,7 +1,7 @@ id: imputationserver-hla name: Genotype Imputation HLA (Minimac4) description: This is the new Michigan Imputation Server Pipeline using Minimac4. Documentation can be found here.

If your input data is GRCh37/hg19 please ensure chromosomes are encoded without prefix (e.g. 20).
If your input data is GRCh38hg38 please ensure chromosomes are encoded with prefix 'chr' (e.g. chr20). -version: 1.8.0-beta1 +version: 1.8.0-beta2 website: https://imputationserver.readthedocs.io category: diff --git a/files/imputationserver-pgs.yaml b/files/imputationserver-pgs.yaml index 0c4297c8..22cef38f 100644 --- a/files/imputationserver-pgs.yaml +++ b/files/imputationserver-pgs.yaml @@ -1,7 +1,7 @@ id: imputationserver-pgs name: Genotype Imputation (PGS Calc Integration) description: This is the new Michigan Imputation Server Pipeline using Minimac4. Documentation can be found here.

If your input data is GRCh37/hg19 please ensure chromosomes are encoded without prefix (e.g. 20).
If your input data is GRCh38hg38 please ensure chromosomes are encoded with prefix 'chr' (e.g. chr20). -version: 1.8.0-beta1 +version: 1.8.0-beta2 website: https://imputationserver.readthedocs.io category: diff --git a/files/minimac4.yaml b/files/minimac4.yaml index 3d85f77d..46303d97 100644 --- a/files/minimac4.yaml +++ b/files/minimac4.yaml @@ -1,7 +1,7 @@ id: imputationserver name: Genotype Imputation (Minimac4) description: This is the new Michigan Imputation Server Pipeline using Minimac4. Documentation can be found here.

If your input data is GRCh37/hg19 please ensure chromosomes are encoded without prefix (e.g. 20).
If your input data is GRCh38hg38 please ensure chromosomes are encoded with prefix 'chr' (e.g. chr20). -version: 1.8.0-beta1 +version: 1.8.0-beta2 website: https://imputationserver.readthedocs.io category: diff --git a/pom.xml b/pom.xml index bdf2209c..f9adfa8c 100644 --- a/pom.xml +++ b/pom.xml @@ -5,7 +5,7 @@ genepi imputationserver - 1.8.0-beta1 + 1.8.0-beta2 jar University of Michigan Imputation Server http://maven.apache.org diff --git a/src/main/java/genepi/imputationserver/steps/imputation/ImputationPipeline.java b/src/main/java/genepi/imputationserver/steps/imputation/ImputationPipeline.java index a0edee27..15301c12 100644 --- a/src/main/java/genepi/imputationserver/steps/imputation/ImputationPipeline.java +++ b/src/main/java/genepi/imputationserver/steps/imputation/ImputationPipeline.java @@ -24,7 +24,7 @@ public class ImputationPipeline { - public static final String PIPELINE_VERSION = "michigan-imputationserver-1.8.0-beta1"; + public static final String PIPELINE_VERSION = "michigan-imputationserver-1.8.0-beta2"; public static final String IMPUTATION_VERSION = "minimac-v4.1.4";