####################################################################
#
# When you add an entry to the top of this file, add your name, the date, and
# an explanation of why something is getting masked. Please be extremely
# careful not to commit atoms that are not valid, as it can cause large-scale
# breakage, especially if it ends up in the daily snapshot.
#
## Example:
##
## # Dev E. Loper <developer@gentoo.org> (28 Jun 2012)
## # Masking  these versions until we can get the
## # v4l stuff to work properly again
## =media-video/mplayer-0.90_pre5
## =media-video/mplayer-0.90_pre5-r1
#
# - Best last rites (removal) practices -
# Include the following info:
# a) reason for masking
# b) bug # for the removal (and yes you should have one)
# c) date of removal (either the date or "in x days")
# d) the word "removal"
#
## Example:
##
## Dev E. Loper <developer@gentoo.org> (25 Jan 2012)
## Masked for removal in 30 days.  Doesn't work
## with new libfoo. Upstream dead, gtk-1, smells
## funny. (bug #987654)
## app-misc/some-package

#--- END OF EXAMPLES ---

# Alexander Puck Neuwirth <alexander@neuwirth-informatik.de> (2025-01-10)
# Download server is gone since about 2014.
sci-biology/vague-bin

# Alexander Puck Neuwirth <alexander@neuwirth-informatik.de> (2025-01-10)
# Missing packages org.ejml.simple and org.slf4j.
sci-misc/stanford-parser

# Alexander Puck Neuwirth <alexander@neuwirth-informatik.de> (2025-01-10)
# Upstream binary files removed.
sci-biology/NGSEPcore-bin

# Alexander Puck Neuwirth <alexander@neuwirth-informatik.de> (2025-01-10)
# Needs sci-biology/bam-readcount.
sci-biology/VarScan

# Alexander Puck Neuwirth <alexander@neuwirth-informatik.de> (2025-01-10)
# Compilation fails.
sci-biology/bam-readcount

# Alexander Puck Neuwirth <alexander@neuwirth-informatik.de> (2024-11-26)
# Depends on removed version of vtk.
sci-biology/ants

# Alexander Puck Neuwirth <alexander@neuwirth-informatik.de> (2024-11-26)
# Depends on masked sci-biology/ants.
sci-biology/samri

# Nowa Ammerlaan <nowa@gentoo.org> (2024-07-18)
# Requires java openmpi bindings, no longer packaged.
sci-biology/BBmap