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Initialize Paths before loading the keystore (elastic#10706)
* Initialize Paths before loading the keystore The paths were incorrectly initialized meaning that instead of creating the keystore in the data directory it was created next to the binary. The problem was the call to `paths.InitPaths()` was done after loading the keystore, this was causing a chicken and egg situation and `paths.Resolve(path.Data, "hello")` was returning "hello" instead of `data/hello`. To solve that situation we do a partial extract of the configuration, just enough to initialize the paths and we move on to the keystore and the complete unpack.
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