New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Notes from Berlin #143

Open

tallulandrews opened this issue Feb 9, 2018 · 1 comment

tallulandrews commented Feb 9, 2018

spend more time on last 3 days and less on processing raw reads
differential isoform analysis?
minimum # reads per cell
umi-counting with kallisto how to aggregate umis from transcripts to genes
Practicals to add: slalom, RNA velocity, dropEST, UMI-tools, BEARscc, Libinorm, Cell-cycle analysis
Drop-seq pipeline
imputation: when is zero really a zero?

liusyscholar commented Feb 10, 2018

Thanks for your advice ~!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment