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new file mode 100644 index 00000000000..93bc4c8afed --- /dev/null +++ b/docs/_c_a_mexample.html @@ -0,0 +1,115 @@ + + + + + + + +PIO: Community Atmosphere Model (CAM) + + + + + + + + + + +
+
+ + + + + + +
+
PIO +  2.4.0 +
+
+
+ + + + + + + + +
+
+ + +
+ +
+ + +
+
+
+
Community Atmosphere Model (CAM)
+
+
+

+Implementation of PIO in CAM

+

CAM references PIO through both interface routines (which call PIO routines) and PIO routines proper. The interface routines control much of the setting up of PIO output and input, whereas the actual output and input is accomplished through direct PIO calls. The PIO routines are located in models/utils/pio. A description of the PIO package along with usage information may be found in the main PIO documentation. We will first describe the interface and then cover the direct calls.

+

+Description of the CAM Interface

+

The CAM interface to PIO consists of the pio_utils module, which is the file models/atm/cam/src/utils/pio_utils.F90.

+

Init_pio_subsystem is the first routine called. It is called from cam_init and initializes PIO in CAM. Init_pio_subsystem calls read_namelist_pio, which calls set_pio_parameters. The main parameters set includes the IO mode (netcdf vs pnetcdf), number of IO tasks, and IO stride.

+

Cam_pio_createfile and cam_pio_openfile create and open a PIO file, respectively. Cam_pio_createfile is called from cam_write_restart, h_define (called from wshist, which is called from write_restart_history), and atm_write_srfrest_mct.

+

Cam_pio_openfile is called from setup_initial (called from cam_initial), cam_read_restart, read_restart_history, atm_read_srfrest_mct, and wrapup (called from cam_run4).

+

Clean_iodesc_list, called from startup_initialconds and cam_read_restart, cleans the list of IO descriptors.

+

Get_phys_decomp and get_dyn_decomp create decompositions for physics and dynamics variables, respectively. Get_decomp is an interface to those routines.

+

Get_phys_decomp is directly called from infld_real_2d, infld_real_3d, infld_real_3dncol; read_restart_physics, write_restart_physics; and pbuf_read_restart, pbuf_write_restart.

+

Get_dyn_decomp is directly called from infld_real_2d and infld_real_3d.

+

Get_decomp is called from read_restart_history and dump_field (called from wshist, which is called from write_restart_history). We see that the only time the get_decomp interface is called is when dealing with history variables (where each variable contains a description telling whether it relates to dynamics or physics).

+

Get_phys_decomp and get_dyn_decomp have an optional column (or column_in) argument, which is used when defining history variables over a range of columns rather than the whole domain.

+

Whenever a decomposition is created, a description of that decomposition is stored in a list. When a new variable is catalogued, that list is searched to see if that needed decomposition already exists. The routine performing that search is find_iodesc (called from get_phys_decomp and get_dyn_decomp). This capability is supported only when the range of history output is the whole domain.

+

Get_phys_decomp calls get_phys_ldof (or get_column_ldof), and get_dyn_decomp calls get_dyn_ldof (or get_column_ldof). These routines do the bulk of the work in constructing the IO decompositions. Get_column_ldof is called when the history output is restricted to a subset of the domain.

+

+Direct calls to PIO

+

Virtually all the calls to PIO routines reference the pio module, located in pio.F90. Many of the variables contained in the pio module are referenced as well. This section of the documentation focuses on these calls and surrounding environs and discusses data types only peripherally.

+

+Writing a history file

+

Write_restart_history (in control/cam_history.F90) controls the writing of a history file. Wshist writes the main variables that are on history tapes. Pio_put_var is used to write header information, and subroutine dump_field writes the main history variables, using primarily PIO_write_darray. Additional variables are then written using PIO_put_var. (Recall that PIO_write_darray isused to write distributed arrays.)

+

+Reading a history file

+

Read_restart_history (in control/cam_history.F90) controls the reading of a history file. Individual parameters are first read using pio_get_var. History variables are then read in using PIO_read_darray (which reads distributed arrays).

+

+Writing a restart dump

+

Cam_write_restart (in control/cam_restart.F90) controls the writing of a restart dump. The calling chain includes write_restart_hycoef (which writes the pressure coefficients), write_restart_dynamics, write_restart_physics, and write_restart_history. Write_restart_coef is in hycoef.F90 and uses PIO_put_var calls. Write_restart_dynamics is in restart_dynamics.F90 (in the dynamics subdirectory relevant to the active dynamical core) and issues primarily PIO_write_darray calls. Write_restart_physics is in physics/cam/restart_physics.F90. It calls a number of restart routines relating to chemistry and aerosols, such as pbuf_write_restart (in physics/cam/phys_buffer.F90), chem_write_restart (in chemistry/mozart), and write_prescribed_?????_restart (where ????? = ozone, ghg, aero, volcaero), located in chemistry/utils/prescribed_?????.F90. Pbuf_write_restart calls the relevant decomposition routine followed by PIO_write_darray. Chem_write_restart calls write_?????_restart (where ????? = tracer_cnst, tracer_srcs, linoz_data, spedata), located in chemistry/mozart/?????.F90. These routines typically use PIO_put_var. Write_restart_history is in cam_history.F90 and uses PIO_put_var.

+

+Reading a restart dump

+

Cam_read_restart (in control/cam_restart.F90) controls the reading of a restart dump. The calling chain corresponds to that for cam_write_restart, and includes read_restart_hycoef, read_restart_dynamics, read_restart_physics, and read_restart_history. Typical routines called are pio_get_var and PIO_read_darray.

+

+Initialization

+

Cam_init (in control/cam_comp.F90) calls cam_initial and phys_init. Cam_initial, which is located in the relevant dynamics subdirectory, calls initial_conds, located in control/startup_initialconds. Initial_conds calls read_inidat, which is located in the relevant dynamics subdirectory. Read_inidat calls infld, located in control/ncdio_atm.F90. Infld calls the relevant decomposition routine followed by PIO_read_darray.

+

Phys_init is located in physics/cam/phys_grid.F90 and calls a number of initialization routines. An important one is phys_inidat, which makes several calls to infld.

+
+ +
+Generated on Fri Feb 8 2019 12:51:08 for PIO by   +doxygen + 1.8.13 +
+ + diff --git a/docs/annotated.html b/docs/annotated.html new file mode 100644 index 00000000000..6568b61a43b --- /dev/null +++ b/docs/annotated.html @@ -0,0 +1,122 @@ + + + + + + + +PIO: Data Types + + + + + + + + + + +
+
+ + + + + + +
+
PIO +  2.4.0 +
+
+
+ + + + + + + +
+ +
+
+ + +
+ +
+ +
+
+
Data Types
+
+
+
Here are the data types with brief descriptions:
+
[detail level 12]
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
 ▼Npio_types
 Cdecompmap_t
 Cfile_desc_tFile descriptor returned by PIO_openfile or PIO_createfile (see pio_types)
 Cio_desc_tAn io descriptor handle that is generated in PIO_initdecomp (see pio_types)
 Ciosystem_desc_tA defined PIO system descriptor created by PIO_init (see pio_types)
 Cpio_rearr_comm_fc_opt_t
 Cpio_rearr_opt_t
 Cvar_desc_tA variable descriptor returned from PIO_def_var (see pio_types)
 ▼Npiodarray
 CPIOc_read_darray
 CPIOc_write_darray_multi
 ▼Npioexample
 CpioexampleclassA class to hold example code and data
 ▼Npionfatt_mod
 CPIOc_get_att_double
 CPIOc_get_att_float
 CPIOc_get_att_int
 CPIOc_get_att_text
 CPIOc_put_att_double
 CPIOc_put_att_float
 CPIOc_put_att_int
 CPIOc_put_att_textWrite a netCDF text attribute
 ▼Npionfget_mod
 CPIOc_get_var_double
 CPIOc_get_var_float
 CPIOc_get_var_int
 CPIOc_get_vara_double
 CPIOc_get_vara_float
 CPIOc_get_vara_int
 CPIOc_get_vara_text
 ▼Npionfput_mod
 CPIOc_put_vara_double
 CPIOc_put_vara_float
 CPIOc_put_vara_int
 CPIOc_put_vara_text
 Cfile_desc_tFile descriptor structure
 Cio_desc_tIO descriptor structure
 Cio_regionIO region structure
 Ciosystem_desc_tIO system descriptor structure
 Crearr_comm_fc_optRearranger comm flow control options
 Crearr_optRearranger options
 Cvar_desc_tVariable description structure
 Cwmulti_bufferThe multi buffer holds data from one or more variables
+
+
+ +
+Generated on Fri Feb 8 2019 12:51:08 for PIO by   +doxygen + 1.8.13 +
+ + diff --git a/docs/api.html b/docs/api.html new file mode 100644 index 00000000000..adc7ae9fca6 --- /dev/null +++ b/docs/api.html @@ -0,0 +1,157 @@ + + + + + + + +PIO: PIO user interface + + + + + + + + + + +
+
+ + + + + + +
+
PIO +  2.4.0 +
+
+
+ + + + + + + + +
+
+ + +
+ +
+ +
+
+
+
PIO user interface
+
+
+

This is a list of all user interface routines:

+

+PIO file Operations

+ +

+PIO startup and shutdown routines

+ +

+PIO decomposition routines

+ +

+Reading and Writing distributed variables

+ +

+Utility routines

+ +

+NetCDF format specific routines

+

Also see: http://www.unidata.ucar.edu/software/netcdf/docs/

+

+Reading/Writing netcdf metadata

+ +

+Netcdf utility routines

+ +

+NetCDF file inquiry routines

+ +
+ +
+Generated on Fri Feb 8 2019 12:51:08 for PIO by   +doxygen + 1.8.13 +
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+
+ + + + + + +
+
PIO +  2.4.0 +
+
+
+ + + + + + + + +
+
+ + +
+ +
+ +
+
+
+
Guide for Contributors
+
+
+

Introduction

+

This document describes the code style to be used when contributing to the PIO library.

+

Consistency of style allows bugs to be spotted more quickly and contributes to code quality.

+

C Code

+

Warnings

+

The C library compiles under GNU gcc without warnings. No code will be merged with the C library which causes warnings during compile.

+

Backward Compatibility

+

We cannot remove or change a function in the public C API. We can add to it, carefully.

+

Brevity

+

Consider: C is a terse language.

+
    +
  • +Use the fact that NULL == 0, and 0 == false, to shorten code.
    • +
  • +Assign and check return values in the same if statement.
    • +
+

Indentation and Spacing

+
    +
  • +Use spaces not tabs.
    • +
  • +4 spaces is the unit of intendation.
    • +
  • +Indentation as defined by the "linux" style in emacs (see below).
    • +
  • +Use spaces around most operators (=+-
    • +
+
+ +
+Generated on Fri Feb 8 2019 12:51:08 for PIO by   +doxygen + 1.8.13 +
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+} + +.inherit { + display: none; +} + +tr.heading h2 { + margin-top: 12px; + margin-bottom: 4px; +} + +@media print +{ + #top { display: none; } + #side-nav { display: none; } + #nav-path { display: none; } + body { overflow:visible; } + h1, h2, h3, h4, h5, h6 { page-break-after: avoid; } + .summary { display: none; } + .memitem { page-break-inside: avoid; } + #doc-content + { + margin-left:0 !important; + height:auto !important; + width:auto !important; + overflow:inherit; + display:inline; + } +} + diff --git a/docs/decomp.html b/docs/decomp.html new file mode 100644 index 00000000000..1d59be56bff --- /dev/null +++ b/docs/decomp.html @@ -0,0 +1,102 @@ + + + + + + + +PIO: Describing decompositions + + + + + + + + + + +
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PIO +  2.4.0 +
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Describing decompositions
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+

One of the biggest challenges to working with PIO is setting up the call to PIO_initdecomp. The user must properly describe how the data within each MPI tasks memory should be placed or retrieved from disk. PIO provides two methods to rearrange data from compute tasks to IO tasks. The first method, called box rearrangement is the only one provided in PIO1. The second called subset rearrangement is introduced in PIO2.

+

+Box rearrangement

+

In this method data is rearranged from compute to IO tasks such that the arrangement of data on the IO tasks optimizes the call from the IO tasks to the underlying (NetCDF) IO library. In this case each compute task will transfer data to one or more IO tasks.

+

+Subset rearrangement

+

In this method each IO task is associated with a unique subset of compute tasks so that each compute task will transfer data to one and only one IO task. Since this technique does not guarantee that data on the IO node represents a contiguous block of data on the file it may require multiple calls to the underlying (NetCDF) IO library.

+

As an example suppose we have a global two dimensional grid of size 4x5 decomposed over 5 tasks. We represent the two dimensional grid in terms of offset from the initial element ie 

+     0  1  2  3 
+     4  5  6  7 
+     8  9 10 11
+    12 13 14 15
+    16 17 18 19 
+

Now suppose this data is distributed over the compute tasks as follows: 

+0: {   0  4 8 12  } 
+1: {  16 1 5 9  } 
+2: {  13 17 2 6  } 
+3: {  10 14 18 3  } 
+4: {   7 11 15 19  } 
+

If we have 2 io tasks the Box rearranger would give: 

+0: { 0  1  2  3  4  5  6  7  8  9  }
+1: { 10 11 12 13 14 15 16 17 18 19 }
+

While the subset rearranger would give: 

+0: { 0  1  4  5  8  9  12 16 }
+1: { 2  3  6  7  10 11 13 14 15 17 18 19 }
+

Note that while the box rearranger gives a data layout which is well balanced and well suited for the underlying io library, it had to communicate with every compute task to do so. On the other hand the subset rearranger communicated with only a portion of the compute tasks but requires more work on the part of the underlying io library to complete the operation.

+

Also note if every task is an IO task then the box rearranger will need to do an alltoall communication, while the subset rearranger does none. In fact using the subset rearranger with every compute task an IO task provides a measure of what you might expect the performance of the underlying IO library to be if it were used without PIO.

+
+ +
+Generated on Fri Feb 8 2019 12:51:08 for PIO by   +doxygen + 1.8.13 +
+ + diff --git a/docs/deprecated.html b/docs/deprecated.html new file mode 100644 index 00000000000..910d9ddd328 --- /dev/null +++ b/docs/deprecated.html @@ -0,0 +1,85 @@ + + + + + + + +PIO: Deprecated List + + + + + + + + + + +
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PIO +  2.4.0 +
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Deprecated List
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Subprogram piolib_mod::initdecomp_1dof_bin_i8 (iosystem, basepiotype, dims, lenblocks, compdof, iodofr, iodesc)
+
+
Subprogram piolib_mod::initdecomp_1dof_nf_i4 (iosystem, basepiotype, dims, lenblocks, compdof, iodof, start, count, iodesc)
+
+
Subprogram piolib_mod::initdecomp_2dof_bin_i4 (iosystem, basepiotype, dims, lenblocks, compdof, iodofr, iodofw, iodesc)
+
+
Subprogram piolib_mod::initdecomp_2dof_nf_i4 (iosystem, basepiotype, dims, lenblocks, compdof, iodofr, iodofw, start, count, iodesc)
+
+
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c → src Relation

File in examples/cIncludes file in src
darray_async.cclib / pio.h
darray_no_async.cclib / pio.h
example1.cclib / pio.h
example2.cclib / pio.h
examplePio.cclib / pio.h
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file  pio.F90
 User interface Module for PIO, this is the only file a user program should 'use'.
 
file  pio_kinds.F90
 basic data types
 
file  pio_support.F90
 internal code for compiler workarounds, aborts and debug functions
 
file  pio_types.F90
 Derived datatypes and constants for PIO Fortran API.
 
file  piolib_mod.F90
 Initialization Routines for PIO.
 
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file  examplePio.f90
 A simple Fortran example for the ParallelIO Library.
 
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file  example1.c
 A simple C example for the ParallelIO Library.
 
file  example2.c
 A simple C example for the ParallelIO Library.
 
file  examplePio.c
 A simple C example for the ParallelIO Library.
 
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flib Directory Reference
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file  piodarray.F90
 Read and write routines for decomposed data.
 
file  pionfatt_mod.F90
 NetCDF attribute interface to PIO.
 
file  pionfget_mod.F90
 Read Routines for non-decomposed NetCDF data.
 
file  pionfput_mod.F90
 Write routines for non-decomposed NetCDF data.
 
+
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PIO +  2.4.0 +
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clib Directory Reference
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+Files

file  pio.h [code]
 Public headers for the PIO C interface.
 
file  pio_darray.c
 Public functions that read and write distributed arrays in PIO.
 
file  pio_file.c
 PIO File Handling.
 
file  pio_get_nc.c
 PIO functions to get data (excluding varm functions).
 
file  pio_nc.c
 PIO interfaces to NetCDF support functions.
 
file  pio_nc4.c
 Functions to wrap netCDF-4 functions for PIO.
 
file  pio_put_nc.c
 PIO functions to write data.
 
file  pioc.c
 Some initialization and support functions.
 
file  pioc_sc.c
 Compute start and count arrays for the box rearranger.
 
+
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+Generated on Fri Feb 8 2019 12:51:08 for PIO by   +doxygen + 1.8.13 +
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+} + +p.startli, p.startdd { + margin-top: 2px; +} + +p.starttd { + margin-top: 0px; +} + +p.endli { + margin-bottom: 0px; +} + +p.enddd { + margin-bottom: 4px; +} + +p.endtd { + margin-bottom: 2px; +} + +/* @end */ + +caption { + font-weight: bold; +} + +span.legend { + font-size: 70%; + text-align: center; +} + +h3.version { + font-size: 90%; + text-align: center; +} + +div.qindex, div.navtab{ + background-color: #EBEFF6; + border: 1px solid #A3B4D7; + text-align: center; +} + +div.qindex, div.navpath { + width: 100%; + line-height: 140%; +} + +div.navtab { + margin-right: 15px; +} + +/* @group Link Styling */ + +a { + color: #3D578C; + font-weight: normal; + text-decoration: none; +} + +.contents a:visited { + color: #4665A2; +} + +a:hover { + text-decoration: underline; +} + +a.qindex { + font-weight: bold; +} + +a.qindexHL { + font-weight: bold; + background-color: #9CAFD4; + color: #ffffff; + border: 1px double #869DCA; +} + +.contents a.qindexHL:visited { + color: #ffffff; +} + +a.el { + font-weight: bold; +} + +a.elRef { +} + +a.code, a.code:visited, a.line, a.line:visited { + color: #4665A2; +} + +a.codeRef, a.codeRef:visited, a.lineRef, a.lineRef:visited { + color: #4665A2; +} + +/* @end */ + +dl.el { + margin-left: -1cm; +} + +pre.fragment { + border: 1px solid #C4CFE5; + background-color: #FBFCFD; + padding: 4px 6px; + margin: 4px 8px 4px 2px; + overflow: auto; + word-wrap: break-word; + font-size: 9pt; + line-height: 125%; + font-family: monospace, fixed; + font-size: 105%; +} + +div.fragment { + padding: 0px; + margin: 4px 8px 4px 2px; + background-color: #FBFCFD; + border: 1px solid #C4CFE5; +} + +div.line { + font-family: monospace, fixed; + font-size: 13px; + min-height: 13px; + line-height: 1.0; + text-wrap: unrestricted; + white-space: -moz-pre-wrap; /* Moz */ + white-space: -pre-wrap; /* Opera 4-6 */ + white-space: -o-pre-wrap; /* Opera 7 */ + white-space: pre-wrap; /* CSS3 */ + word-wrap: break-word; /* IE 5.5+ */ + text-indent: -53px; + padding-left: 53px; + padding-bottom: 0px; + margin: 0px; + -webkit-transition-property: background-color, box-shadow; + -webkit-transition-duration: 0.5s; + -moz-transition-property: background-color, box-shadow; + -moz-transition-duration: 0.5s; + -ms-transition-property: background-color, box-shadow; + -ms-transition-duration: 0.5s; + -o-transition-property: background-color, box-shadow; + -o-transition-duration: 0.5s; + transition-property: background-color, box-shadow; + transition-duration: 0.5s; +} + +div.line:after { + content:"\000A"; + white-space: pre; +} + +div.line.glow { + background-color: cyan; + box-shadow: 0 0 10px cyan; +} + + +span.lineno { + padding-right: 4px; + text-align: right; + border-right: 2px solid #0F0; + background-color: #E8E8E8; + white-space: pre; +} +span.lineno a { + background-color: #D8D8D8; +} + +span.lineno a:hover { + background-color: #C8C8C8; +} + +.lineno { + -webkit-touch-callout: none; + -webkit-user-select: none; + -khtml-user-select: none; + -moz-user-select: none; + -ms-user-select: none; + user-select: none; +} + +div.ah, span.ah { + background-color: black; + font-weight: bold; + color: #ffffff; + margin-bottom: 3px; + margin-top: 3px; + padding: 0.2em; + border: solid thin #333; + border-radius: 0.5em; + -webkit-border-radius: .5em; + -moz-border-radius: .5em; + box-shadow: 2px 2px 3px #999; + -webkit-box-shadow: 2px 2px 3px #999; + -moz-box-shadow: rgba(0, 0, 0, 0.15) 2px 2px 2px; + background-image: -webkit-gradient(linear, left top, left bottom, from(#eee), to(#000),color-stop(0.3, #444)); + background-image: -moz-linear-gradient(center top, #eee 0%, #444 40%, #000 110%); +} + +div.classindex ul { + list-style: none; + padding-left: 0; +} + +div.classindex span.ai { + display: inline-block; +} + +div.groupHeader { + margin-left: 16px; + margin-top: 12px; + font-weight: bold; +} + +div.groupText { + margin-left: 16px; + font-style: italic; +} + +body { + background-color: white; + color: black; + margin: 0; +} + +div.contents { + margin-top: 10px; + margin-left: 12px; + margin-right: 8px; +} + +td.indexkey { + background-color: #EBEFF6; + font-weight: bold; + border: 1px solid #C4CFE5; + margin: 2px 0px 2px 0; + padding: 2px 10px; + white-space: nowrap; + vertical-align: top; +} + +td.indexvalue { + background-color: #EBEFF6; + border: 1px solid #C4CFE5; + padding: 2px 10px; + margin: 2px 0px; +} + +tr.memlist { + background-color: #EEF1F7; +} + +p.formulaDsp { + text-align: center; +} + +img.formulaDsp { + +} + +img.formulaInl { + vertical-align: middle; +} + +div.center { + text-align: center; + margin-top: 0px; + margin-bottom: 0px; + padding: 0px; +} + +div.center img { + border: 0px; +} + +address.footer { + text-align: right; + padding-right: 12px; +} + +img.footer { + border: 0px; + vertical-align: middle; +} + +/* @group Code Colorization */ + +span.keyword { + color: #008000 +} + +span.keywordtype { + color: #604020 +} + +span.keywordflow { + color: #e08000 +} + +span.comment { + color: #800000 +} + +span.preprocessor { + color: #806020 +} + +span.stringliteral { + color: #002080 +} + +span.charliteral { + color: #008080 +} + +span.vhdldigit { + color: #ff00ff +} + +span.vhdlchar { + color: #000000 +} + +span.vhdlkeyword { + color: #700070 +} + +span.vhdllogic { + color: #ff0000 +} + +blockquote { + background-color: #F7F8FB; + border-left: 2px solid #9CAFD4; + margin: 0 24px 0 4px; + padding: 0 12px 0 16px; +} + +/* @end */ + +/* +.search { + color: #003399; + font-weight: bold; +} + +form.search { + margin-bottom: 0px; + margin-top: 0px; +} + +input.search { + font-size: 75%; + color: #000080; + font-weight: normal; + background-color: #e8eef2; +} +*/ + +td.tiny { + font-size: 75%; +} + +.dirtab { + padding: 4px; + border-collapse: collapse; + border: 1px solid #A3B4D7; +} + +th.dirtab { + background: #EBEFF6; + font-weight: bold; +} + +hr { + height: 0px; + border: none; + border-top: 1px solid #4A6AAA; +} + +hr.footer { + height: 1px; +} + +/* @group Member Descriptions */ + +table.memberdecls { + border-spacing: 0px; + padding: 0px; +} + +.memberdecls td, .fieldtable tr { + -webkit-transition-property: background-color, box-shadow; + -webkit-transition-duration: 0.5s; + -moz-transition-property: background-color, box-shadow; + -moz-transition-duration: 0.5s; + -ms-transition-property: background-color, box-shadow; + -ms-transition-duration: 0.5s; + -o-transition-property: background-color, box-shadow; + -o-transition-duration: 0.5s; + transition-property: background-color, box-shadow; + transition-duration: 0.5s; +} + +.memberdecls td.glow, .fieldtable tr.glow { + background-color: cyan; + box-shadow: 0 0 15px cyan; +} + +.mdescLeft, .mdescRight, +.memItemLeft, .memItemRight, +.memTemplItemLeft, .memTemplItemRight, .memTemplParams { + background-color: #F9FAFC; + border: none; + margin: 4px; + padding: 1px 0 0 8px; +} + +.mdescLeft, .mdescRight { + padding: 0px 8px 4px 8px; + color: #555; +} + +.memSeparator { + border-bottom: 1px solid #DEE4F0; + line-height: 1px; + margin: 0px; + padding: 0px; +} + +.memItemLeft, .memTemplItemLeft { + white-space: nowrap; +} + +.memItemRight { + width: 100%; +} + +.memTemplParams { + color: #4665A2; + white-space: nowrap; + font-size: 80%; +} + +/* @end */ + +/* @group Member Details */ + +/* Styles for detailed member documentation */ + +.memtitle { + padding: 8px; + border-top: 1px solid #A8B8D9; + border-left: 1px solid #A8B8D9; + border-right: 1px solid #A8B8D9; + border-top-right-radius: 4px; + border-top-left-radius: 4px; + margin-bottom: -1px; + background-image: url('nav_f.png'); + background-repeat: repeat-x; + background-color: #E2E8F2; + line-height: 1.25; + font-weight: 300; + float:left; +} + +.permalink +{ + font-size: 65%; + display: inline-block; + vertical-align: middle; +} + +.memtemplate { + font-size: 80%; + color: #4665A2; + font-weight: normal; + margin-left: 9px; +} + +.memnav { + background-color: #EBEFF6; + border: 1px solid #A3B4D7; + text-align: center; + margin: 2px; + margin-right: 15px; + padding: 2px; +} + +.mempage { + width: 100%; +} + +.memitem { + padding: 0; + margin-bottom: 10px; + margin-right: 5px; + -webkit-transition: box-shadow 0.5s linear; + -moz-transition: box-shadow 0.5s linear; + -ms-transition: box-shadow 0.5s linear; + -o-transition: box-shadow 0.5s linear; + transition: box-shadow 0.5s linear; + display: table !important; + width: 100%; +} + +.memitem.glow { + box-shadow: 0 0 15px cyan; +} + +.memname { + font-weight: 400; + margin-left: 6px; +} + +.memname td { + vertical-align: bottom; +} + +.memproto, dl.reflist dt { + border-top: 1px solid #A8B8D9; + border-left: 1px solid #A8B8D9; + border-right: 1px solid #A8B8D9; + padding: 6px 0px 6px 0px; + color: #253555; + font-weight: bold; + text-shadow: 0px 1px 1px rgba(255, 255, 255, 0.9); + background-color: #DFE5F1; + /* opera specific markup */ + box-shadow: 5px 5px 5px rgba(0, 0, 0, 0.15); + border-top-right-radius: 4px; + /* firefox specific markup */ + -moz-box-shadow: rgba(0, 0, 0, 0.15) 5px 5px 5px; + -moz-border-radius-topright: 4px; + /* webkit specific markup */ + -webkit-box-shadow: 5px 5px 5px rgba(0, 0, 0, 0.15); + -webkit-border-top-right-radius: 4px; + +} + +.overload { + font-family: "courier new",courier,monospace; + font-size: 65%; +} + +.memdoc, dl.reflist dd { + border-bottom: 1px solid #A8B8D9; + border-left: 1px solid #A8B8D9; + border-right: 1px solid #A8B8D9; + padding: 6px 10px 2px 10px; + background-color: #FBFCFD; + border-top-width: 0; + background-image:url('nav_g.png'); + background-repeat:repeat-x; + background-color: #FFFFFF; + /* opera specific markup */ + border-bottom-left-radius: 4px; + border-bottom-right-radius: 4px; + box-shadow: 5px 5px 5px rgba(0, 0, 0, 0.15); + /* firefox specific markup */ + -moz-border-radius-bottomleft: 4px; + -moz-border-radius-bottomright: 4px; + -moz-box-shadow: rgba(0, 0, 0, 0.15) 5px 5px 5px; + /* webkit specific markup */ + -webkit-border-bottom-left-radius: 4px; + -webkit-border-bottom-right-radius: 4px; + -webkit-box-shadow: 5px 5px 5px rgba(0, 0, 0, 0.15); +} + +dl.reflist dt { + padding: 5px; +} + +dl.reflist dd { + margin: 0px 0px 10px 0px; + padding: 5px; +} + +.paramkey { + text-align: right; +} + +.paramtype { + white-space: nowrap; +} + +.paramname { + color: #602020; + white-space: nowrap; +} +.paramname em { + font-style: normal; +} +.paramname code { + line-height: 14px; +} + +.params, .retval, .exception, .tparams { + margin-left: 0px; + padding-left: 0px; +} + +.params .paramname, .retval .paramname { + font-weight: bold; + vertical-align: top; +} + +.params .paramtype { + font-style: italic; + vertical-align: top; +} + +.params .paramdir { + font-family: "courier new",courier,monospace; + vertical-align: top; +} + +table.mlabels { + border-spacing: 0px; +} + +td.mlabels-left { + width: 100%; + padding: 0px; +} + +td.mlabels-right { + vertical-align: bottom; + padding: 0px; + white-space: nowrap; +} + +span.mlabels { + margin-left: 8px; +} + +span.mlabel { + background-color: #728DC1; + border-top:1px solid #5373B4; + border-left:1px solid #5373B4; + border-right:1px solid #C4CFE5; + border-bottom:1px solid #C4CFE5; + text-shadow: none; + color: white; + margin-right: 4px; + padding: 2px 3px; + border-radius: 3px; + font-size: 7pt; + white-space: nowrap; + vertical-align: middle; +} + + + +/* @end */ + +/* these are for tree view inside a (index) page */ + +div.directory { + margin: 10px 0px; + border-top: 1px solid #9CAFD4; + border-bottom: 1px solid #9CAFD4; + width: 100%; +} + +.directory table { + border-collapse:collapse; +} + +.directory td { + margin: 0px; + padding: 0px; + vertical-align: top; +} + +.directory td.entry { + white-space: nowrap; + padding-right: 6px; + padding-top: 3px; +} + +.directory td.entry a { + outline:none; +} + +.directory td.entry a img { + border: none; +} + +.directory td.desc { + width: 100%; + padding-left: 6px; + padding-right: 6px; + padding-top: 3px; + border-left: 1px solid rgba(0,0,0,0.05); +} + +.directory tr.even { + padding-left: 6px; + background-color: #F7F8FB; +} + +.directory img { + vertical-align: -30%; +} + +.directory .levels { + white-space: nowrap; + width: 100%; + text-align: right; + font-size: 9pt; +} + +.directory .levels span { + cursor: pointer; + padding-left: 2px; + padding-right: 2px; + color: #3D578C; +} + +.arrow { + color: #9CAFD4; + -webkit-user-select: none; + -khtml-user-select: none; + -moz-user-select: none; + -ms-user-select: none; + user-select: none; + cursor: pointer; + font-size: 80%; + display: inline-block; + width: 16px; + height: 22px; +} + +.icon { + font-family: Arial, Helvetica; + font-weight: bold; + font-size: 12px; + height: 14px; + width: 16px; + display: inline-block; + background-color: #728DC1; + color: white; + text-align: center; + border-radius: 4px; + margin-left: 2px; + margin-right: 2px; +} + +.icona { + width: 24px; + height: 22px; + display: inline-block; +} + +.iconfopen { + width: 24px; + height: 18px; + margin-bottom: 4px; + background-image:url('folderopen.png'); + background-position: 0px -4px; + background-repeat: repeat-y; + vertical-align:top; + display: inline-block; +} + +.iconfclosed { + width: 24px; + height: 18px; + margin-bottom: 4px; + background-image:url('folderclosed.png'); + background-position: 0px -4px; + background-repeat: repeat-y; + vertical-align:top; + display: inline-block; +} + +.icondoc { + width: 24px; + height: 18px; + margin-bottom: 4px; + background-image:url('doc.png'); + background-position: 0px -4px; + background-repeat: repeat-y; + vertical-align:top; + display: inline-block; +} + +table.directory { + font: 400 14px Roboto,sans-serif; +} + +/* @end */ + +div.dynheader { + margin-top: 8px; + -webkit-touch-callout: none; + -webkit-user-select: none; + -khtml-user-select: none; + -moz-user-select: none; + -ms-user-select: none; + user-select: none; +} + +address { + font-style: normal; + color: #2A3D61; +} + +table.doxtable caption { + caption-side: top; +} + +table.doxtable { + border-collapse:collapse; + margin-top: 4px; + margin-bottom: 4px; +} + +table.doxtable td, table.doxtable th { + border: 1px solid #2D4068; + padding: 3px 7px 2px; +} + +table.doxtable th { + background-color: #374F7F; + color: #FFFFFF; + font-size: 110%; + padding-bottom: 4px; + padding-top: 5px; +} + +table.fieldtable { + /*width: 100%;*/ + margin-bottom: 10px; + border: 1px solid #A8B8D9; + border-spacing: 0px; + -moz-border-radius: 4px; + -webkit-border-radius: 4px; + border-radius: 4px; + -moz-box-shadow: rgba(0, 0, 0, 0.15) 2px 2px 2px; + -webkit-box-shadow: 2px 2px 2px rgba(0, 0, 0, 0.15); + box-shadow: 2px 2px 2px rgba(0, 0, 0, 0.15); +} + +.fieldtable td, .fieldtable th { + padding: 3px 7px 2px; +} + +.fieldtable td.fieldtype, .fieldtable td.fieldname { + white-space: nowrap; + border-right: 1px solid #A8B8D9; + border-bottom: 1px solid #A8B8D9; + vertical-align: top; +} + +.fieldtable td.fieldname { + padding-top: 3px; +} + +.fieldtable td.fielddoc { + border-bottom: 1px solid #A8B8D9; + /*width: 100%;*/ +} + +.fieldtable td.fielddoc p:first-child { + margin-top: 0px; +} + +.fieldtable td.fielddoc p:last-child { + margin-bottom: 2px; +} + +.fieldtable tr:last-child td { + border-bottom: none; +} + +.fieldtable th { + background-image:url('nav_f.png'); + background-repeat:repeat-x; + background-color: #E2E8F2; + font-size: 90%; + color: #253555; + padding-bottom: 4px; + padding-top: 5px; + text-align:left; + font-weight: 400; + -moz-border-radius-topleft: 4px; + -moz-border-radius-topright: 4px; + -webkit-border-top-left-radius: 4px; + -webkit-border-top-right-radius: 4px; + border-top-left-radius: 4px; + border-top-right-radius: 4px; + border-bottom: 1px solid #A8B8D9; +} + + +.tabsearch { + top: 0px; + left: 10px; + height: 36px; + background-image: url('tab_b.png'); + z-index: 101; + overflow: hidden; + font-size: 13px; +} + +.navpath ul +{ + font-size: 11px; + background-image:url('tab_b.png'); + background-repeat:repeat-x; + background-position: 0 -5px; + height:30px; + line-height:30px; + color:#8AA0CC; + border:solid 1px #C2CDE4; + overflow:hidden; + margin:0px; + padding:0px; +} + +.navpath li +{ + list-style-type:none; + float:left; + padding-left:10px; + padding-right:15px; + background-image:url('bc_s.png'); + background-repeat:no-repeat; + background-position:right; + color:#364D7C; +} + +.navpath li.navelem a +{ + height:32px; + display:block; + text-decoration: none; + outline: none; + color: #283A5D; + font-family: 'Lucida Grande',Geneva,Helvetica,Arial,sans-serif; + text-shadow: 0px 1px 1px rgba(255, 255, 255, 0.9); + text-decoration: none; +} + +.navpath li.navelem a:hover +{ + color:#6884BD; +} + +.navpath li.footer +{ + list-style-type:none; + float:right; + padding-left:10px; + padding-right:15px; + background-image:none; + background-repeat:no-repeat; + background-position:right; + color:#364D7C; + font-size: 8pt; +} + + +div.summary +{ + float: right; + font-size: 8pt; + padding-right: 5px; + width: 50%; + text-align: right; +} + +div.summary a +{ + white-space: nowrap; +} + +table.classindex +{ + margin: 10px; + white-space: nowrap; + margin-left: 3%; + margin-right: 3%; + width: 94%; + border: 0; + border-spacing: 0; + padding: 0; +} + +div.ingroups +{ + font-size: 8pt; + width: 50%; + text-align: left; +} + +div.ingroups a +{ + white-space: nowrap; +} + +div.header +{ + background-image:url('nav_h.png'); + background-repeat:repeat-x; + background-color: #F9FAFC; + margin: 0px; + border-bottom: 1px solid #C4CFE5; +} + +div.headertitle +{ + padding: 5px 5px 5px 10px; +} + +dl +{ + padding: 0 0 0 10px; 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+ -khtml-user-select: none; + -moz-user-select: none; + -ms-user-select: none; + user-select: none; +} + +.inherit_header td { + padding: 6px 0px 2px 5px; +} + +.inherit { + display: none; +} + +tr.heading h2 { + margin-top: 12px; + margin-bottom: 4px; +} + +/* tooltip related style info */ + +.ttc { + position: absolute; + display: none; +} + +#powerTip { + cursor: default; + white-space: nowrap; + background-color: white; + border: 1px solid gray; + border-radius: 4px 4px 4px 4px; + box-shadow: 1px 1px 7px gray; + display: none; + font-size: smaller; + max-width: 80%; + opacity: 0.9; + padding: 1ex 1em 1em; + position: absolute; + z-index: 2147483647; +} + +#powerTip div.ttdoc { + color: grey; + font-style: italic; +} + +#powerTip div.ttname a { + font-weight: bold; +} + +#powerTip div.ttname { + font-weight: bold; +} + +#powerTip div.ttdeci { + color: #006318; +} + +#powerTip div { + margin: 0px; + padding: 0px; + font: 12px/16px Roboto,sans-serif; +} + +#powerTip:before, #powerTip:after { + content: ""; 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+} + +#powerTip.n:after, #powerTip.ne:after, #powerTip.nw:after { + border-top-color: #ffffff; + border-width: 10px; + margin: 0px -10px; +} +#powerTip.n:before { + border-top-color: #808080; + border-width: 11px; + margin: 0px -11px; +} +#powerTip.n:after, #powerTip.n:before { + left: 50%; +} + +#powerTip.nw:after, #powerTip.nw:before { + right: 14px; +} + +#powerTip.ne:after, #powerTip.ne:before { + left: 14px; +} + +#powerTip.s:after, #powerTip.s:before, +#powerTip.se:after, #powerTip.se:before, +#powerTip.sw:after, #powerTip.sw:before { + bottom: 100%; +} + +#powerTip.s:after, #powerTip.se:after, #powerTip.sw:after { + border-bottom-color: #ffffff; + border-width: 10px; + margin: 0px -10px; +} + +#powerTip.s:before, #powerTip.se:before, #powerTip.sw:before { + border-bottom-color: #808080; + border-width: 11px; + margin: 0px -11px; +} + +#powerTip.s:after, #powerTip.s:before { + left: 50%; +} + +#powerTip.sw:after, #powerTip.sw:before { + right: 14px; +} + +#powerTip.se:after, #powerTip.se:before { + left: 14px; 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+ margin-top: 4px; + margin-bottom: 4px; +} + +table.markdownTable td, table.markdownTable th { + border: 1px solid #2D4068; + padding: 3px 7px 2px; +} + +table.markdownTableHead tr { +} + +table.markdownTableBodyLeft td, table.markdownTable th { + border: 1px solid #2D4068; + padding: 3px 7px 2px; +} + +th.markdownTableHeadLeft th.markdownTableHeadRight th.markdownTableHeadCenter th.markdownTableHeadNone { + background-color: #374F7F; + color: #FFFFFF; + font-size: 110%; + padding-bottom: 4px; + padding-top: 5px; +} + +th.markdownTableHeadLeft { + text-align: left +} + +th.markdownTableHeadRight { + text-align: right +} + +th.markdownTableHeadCenter { + text-align: center +} +*/ + +table.markdownTable { + border-collapse:collapse; + margin-top: 4px; + margin-bottom: 4px; +} + +table.markdownTable td, table.markdownTable th { + border: 1px solid #2D4068; + padding: 3px 7px 2px; +} + +table.markdownTable tr { +} + +th.markdownTableHeadLeft, th.markdownTableHeadRight, th.markdownTableHeadCenter, th.markdownTableHeadNone { + background-color: #374F7F; + color: #FFFFFF; + font-size: 110%; + padding-bottom: 4px; + padding-top: 5px; +} + +th.markdownTableHeadLeft, td.markdownTableBodyLeft { + text-align: left +} + +th.markdownTableHeadRight, td.markdownTableBodyRight { + text-align: right +} + +th.markdownTableHeadCenter, td.markdownTableBodyCenter { + text-align: center +} + + +/* @end */ diff --git a/docs/doxygen.png b/docs/doxygen.png new file mode 100644 index 0000000000000000000000000000000000000000..3ff17d807fd8aa003bed8bb2a69e8f0909592fd1 GIT binary patch literal 3779 zcmV;!4m|ORP)tMIv#Q0*~7*`IBSO7_x;@a8#Zk6_PeKR_s92J&)(m+);m9Iz3blw)z#Gi zP!9lj4$%+*>Hz@HCmM9L9|8c+0u=!H$O3?R0Kgx|#WP<6fKfC8fM-CQZT|_r@`>VO zX^Hgb|9cJqpdJA5$MCEK`F_2@2Y@s>^+;pF`~jdI0Pvr|vl4`=C)EH@1IFe7pdJ8F zH(qGi004~QnF)Ggga~8v08kGAs2hKTATxr7pwfNk|4#_AaT>w8P6TV+R2kbS$v==} zAjf`s0g#V8lB+b3)5oEI*q+{Yt$MZDruD2^;$+(_%Qn+%v0X-bJO=;@kiJ^ygLBnC z?1OVv_%aex1M@jKU|Z~$eI?PoF4Vj>fDzyo zAiLfpXY*a^Sj-S5D0S3@#V$sRW)g)_1e#$%8xdM>Jm7?!h zu0P2X=xoN>^!4DoPRgph2(2va07yfpXF+WH7EOg1GY%Zn z7~1A<(z7Q$ktEXhW_?GMpHp9l_UL18F3KOsxu81pqoBiNbFSGsof-W z6~eloMoz=4?OOnl2J268x5rOY`dCk0us(uS#Ud4yqOr@?=Q57a}tit|BhY>}~frH1sP`ScHS_d)oqH^lYy zZ%VP`#10MlE~P?cE(%(#(AUSv_T{+;t@$U}El}(1ig`vZo`Rm;+5&(AYzJ^Ae=h2X z@Re%vHwZU>|f0NI&%$*4eJweC5OROQrpPMA@*w|o z()A==l}(@bv^&>H1Ob3C=<^|hob?0+xJ?QQ3-ueQC}zy&JQNib!OqSO@-=>XzxlSF zAZ^U*1l6EEmg3r};_HY>&Jo_{dOPEFTWPmt=U&F#+0(O59^UIlHbNX+eF8UzyDR*T z(=5X$VF3!gm@RooS-&iiUYGG^`hMR(07zr_xP`d!^BH?uD>Phl8Rdifx3Af^Zr`Ku ztL+~HkVeL#bJ)7;`=>;{KNRvjmc}1}c58Sr#Treq=4{xo!ATy|c>iRSp4`dzMMVd@ zL8?uwXDY}Wqgh4mH`|$BTXpUIu6A1-cSq%hJw;@^Zr8TP=GMh*p(m(tN7@!^D~sl$ zz^tf4II4|};+irE$Fnm4NTc5%p{PRA`%}Zk`CE5?#h3|xcyQsS#iONZ z6H(@^i9td!$z~bZiJLTax$o>r(p}3o@< zyD7%(>ZYvy=6$U3e!F{Z`uSaYy`xQyl?b{}eg|G3&fz*`QH@mDUn)1%#5u`0m$%D} z?;tZ0u(mWeMV0QtzjgN!lT*pNRj;6510Wwx?Yi_=tYw|J#7@(Xe7ifDzXuK;JB;QO z#bg~K$cgm$@{QiL_3yr}y&~wuv=P=#O&Tj=Sr)aCUlYmZMcw?)T?c%0rUe1cS+o!qs_ zQ6Gp)-{)V!;=q}llyK3|^WeLKyjf%y;xHku;9(vM!j|~<7w1c*Mk-;P{T&yG) z@C-8E?QPynNQ<8f01D`2qexcVEIOU?y}MG)TAE6&VT5`rK8s(4PE;uQ92LTXUQ<>^ ztyQ@=@kRdh@ebUG^Z6NWWIL;_IGJ2ST>$t!$m$qvtj0Qmw8moN6GUV^!QKNK zHBXCtUH8)RY9++gH_TUV4^=-j$t}dD3qsN7GclJ^Zc&(j6&a_!$jCf}%c5ey`pm~1)@{yI3 zTdWyB+*X{JFw#z;PwRr5evb2!ueWF;v`B0HoUu4-(~aL=z;OXUUEtG`_$)Oxw6FKg zEzY`CyKaSBK3xt#8gA|r_|Kehn_HYVBMpEwbn9-fI*!u*eTA1ef8Mkl1=!jV4oYwWYM}i`A>_F4nhmlCIC6WLa zY%;4&@AlnaG11ejl61Jev21|r*m+?Kru3;1tFDl}#!OzUp6c>go4{C|^erwpG*&h6bspUPJag}oOkN2912Y3I?(eRc@U9>z#HPBHC?nps7H5!zP``90!Q1n80jo+B3TWXp!8Pe zwuKuLLI6l3Gv@+QH*Y}2wPLPQ1^EZhT#+Ed8q8Wo z1pTmIBxv14-{l&QVKxAyQF#8Q@NeJwWdKk>?cpiJLkJr+aZ!Me+Cfp!?FWSRf^j2k z73BRR{WSKaMkJ>1Nbx5dan5hg^_}O{Tj6u%iV%#QGz0Q@j{R^Ik)Z*+(YvY2ziBG)?AmJa|JV%4UT$k`hcOg5r9R?5>?o~JzK zJCrj&{i#hG>N7!B4kNX(%igb%kDj0fOQThC-8mtfap82PNRXr1D>lbgg)dYTQ(kbx z`Ee5kXG~Bh+BHQBf|kJEy6(ga%WfhvdQNDuOfQoe377l#ht&DrMGeIsI5C<&ai zWG$|hop2@@q5YDa)_-A?B02W;#fH!%k`daQLEItaJJ8Yf1L%8x;kg?)k)00P-lH+w z)5$QNV6r2$YtnV(4o=0^3{kmaXn*Dm0F*fU(@o)yVVjk|ln8ea6BMy%vZAhW9|wvA z8RoDkVoMEz1d>|5(k0Nw>22ZT){V<3$^C-cN+|~hKt2)){+l-?3m@-$c?-dlzQ)q- zZ)j%n^gerV{|+t}9m1_&&Ly!9$rtG4XX|WQ8`xYzGC~U@nYh~g(z9)bdAl#xH)xd5a=@|qql z|FzEil{P5(@gy!4ek05i$>`E^G~{;pnf6ftpLh$h#W?^#4UkPfa;;?bsIe&kz!+40 zI|6`F2n020)-r`pFaZ38F!S-lJM-o&inOw|66=GMeP@xQU5ghQH{~5Uh~TMTd;I9` z>YhVB`e^EVj*S7JF39ZgNf}A-0DwOcTT63ydN$I3b?yBQtUI*_fae~kPvzoD$zjX3 zoqBe#>12im4WzZ=f^4+u=!lA|#r%1`WB0-6*3BL#at`47#ebPpR|D1b)3BjT34nYY z%Ds%d?5$|{LgOIaRO{{oC&RK`O91$fqwM0(C_TALcozu*fWHb%%q&p-q{_8*2Zsi^ zh1ZCnr^UYa;4vQEtHk{~zi>wwMC5o{S=$P0X681y`SXwFH?Ewn{x-MOZynmc)JT5v zuHLwh;tLfxRrr%|k370}GofLl7thg>ACWWY&msqaVu&ry+`7+Ss>NL^%T1|z{IGMA zW-SKl=V-^{(f!Kf^#3(|T2W47d(%JVCI4JgRrT1pNz>+ietmFToNv^`gzC@&O-)+i zPQ~RwK8%C_vf%;%e>NyTp~dM5;!C|N0Q^6|CEb7Bw=Vz~$1#FA;Z*?mKSC)Hl-20s t8QyHj(g6VK0RYbl8UjE)0O0w=e*@m04r>stuEhWV002ovPDHLkV1hl;dM*F} literal 0 HcmV?d00001 diff --git a/docs/dtypes_8h_source.html b/docs/dtypes_8h_source.html new file mode 100644 index 00000000000..b1111bc61d4 --- /dev/null +++ b/docs/dtypes_8h_source.html @@ -0,0 +1,79 @@ + + + + + + + +PIO: dtypes.h Source File + + + + + + + + + + +
+
+ + + + + + +
+
PIO +  2.4.0 +
+
+
+ + + + + + + + +
+
+ + +
+ +
+ + +
+
+
+
dtypes.h
+
+
+
1 #define TYPETEXT 100
2 #define TYPEREAL 101
3 #define TYPEDOUBLE 102
4 #define TYPEINT 103
5 #define TYPELONG 104
6 #define TYPELOGICAL 105
+ +
+Generated on Fri Feb 8 2019 12:51:07 for PIO by   +doxygen + 1.8.13 +
+ + diff --git a/docs/dynsections.js b/docs/dynsections.js new file mode 100644 index 00000000000..85e18369095 --- /dev/null +++ b/docs/dynsections.js @@ -0,0 +1,97 @@ +function toggleVisibility(linkObj) +{ + var base = $(linkObj).attr('id'); + var summary = $('#'+base+'-summary'); + var content = $('#'+base+'-content'); + var trigger = $('#'+base+'-trigger'); + var src=$(trigger).attr('src'); + if (content.is(':visible')===true) { + content.hide(); + summary.show(); + $(linkObj).addClass('closed').removeClass('opened'); + $(trigger).attr('src',src.substring(0,src.length-8)+'closed.png'); + } else { + content.show(); + summary.hide(); + $(linkObj).removeClass('closed').addClass('opened'); + $(trigger).attr('src',src.substring(0,src.length-10)+'open.png'); + } + return false; +} + +function updateStripes() +{ + $('table.directory tr'). + removeClass('even').filter(':visible:even').addClass('even'); +} + +function toggleLevel(level) +{ + $('table.directory tr').each(function() { + var l = this.id.split('_').length-1; + var i = $('#img'+this.id.substring(3)); + var a = $('#arr'+this.id.substring(3)); + if (l + + + + + + +PIO: Error Handling + + + + + + + + + + +
+
+ + + + + + +
+
PIO +  2.4.0 +
+
+
+ + + + + + + + +
+
+ + +
+ +
+ +
+
+
+
Error Handling
+
+
+

By default, PIO handles errors internally by printing a string describing the error and then calling mpi_abort. Application developers can change this behaivior with a call to PIO_seterrorhandling

+
The three types of error handling methods are:
    
+
  • PIO_INTERNAL_ERROR : abort on error from any task
    • 
+
  • PIO_BCAST_ERROR : broadcast an error from io_rank 0 to all tasks in comm
    • 
+
  • PIO_RETURN_ERROR : do nothing - allow the user to handle it
    • 
+

+
Use this instead of ios to set error handling for the library. 

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/examp.html b/docs/examp.html
new file mode 100644
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--- /dev/null
+++ b/docs/examp.html
@@ -0,0 +1,95 @@
+
+
+
+
+
+
+
+PIO: Examples
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+

+

+  

+
Examples 
  

+

+

+
Examples Included with PIO Distribution

+
The PIO library examples can be found under the examples subdirectory. They are built with the make test or make check build target.

+
C Examples

+
The C examples are in the examples/c subdirectory.

+
    
+
  • examplePio.c A simple example showing a write, then read, of a 1D variable.
    • 
+
  • example1.c Another simple example showing a write, then read, of a 1D variable. This produces the same output as examplePio.c.
    • 
+
  • example2.c This example writes a 3D floating point variable, with an unlimited dimension. The data are written in slices along the unlimited dimension. This example also incorporates (if installed) the MPE profiling system to generate graphical output.
    • 
+

+
Fortran Examples

+
The Fortran examples are in the examples/f03 subdirectory.

+
    
+
  • examplePio.f90 A simple example showing a write, then read, of a 1D variable.
    • 
+

+
Other Examples

+
PIO has been implemented in several geophysical component models, including the Community Atmosphere Model (CAM), the Community Land Model (CLM), the Parallel Ocean Program (POP), the Community Ice CodE (CICE), and coupler for used by CCSM4.0 (CPL7). We also provide several simpler example code as well as a test code that is suitable for regression testing and benchmarking.

+
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
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+PIO: example1.c File Reference
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+   
PIO
+    2.4.0
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+  

+Macros |
+Functions |
+Variables  

+  

+
example1.c File Reference
  

+

+

+
+
A simple C example for the ParallelIO Library.  
+More...

+
#include "config.h"

+#include <getopt.h>

+#include <stdio.h>

+#include <stdlib.h>

+#include <unistd.h>

+#include <mpi.h>

+#include <pio.h>

+

+Include dependency graph for example1.c:

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+Macros
#define NUM_NETCDF_FLAVORS   4
 The number of possible output netCDF output flavors available to the ParallelIO library.  More...
 
#define NDIM   1
 The number of dimensions in the example data.  More...
 
#define DIM_LEN   16
 The length of our sample data.  More...
 
#define DIM_NAME   "x"
 The name of the dimension in the netCDF output file.  More...
 
#define VAR_NAME   "foo"
 The name of the variable in the netCDF output file.  More...
 
#define ERR_BAD   1001
 Return code when netCDF output file does not match expectations.  More...
 
#define START_DATA_VAL   42
 The meaning of life, the universe, and everything.  More...
 
#define MPIERR(e)
 Handle MPI errors.  More...
 
#define ERR(e)
 Handle non-MPI errors by finalizing the MPI library and exiting with an exit code.  More...
 

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+
+
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+
+
+

+Functions
int check_file (int ntasks, char *filename)
 Check the output file.  More...
 
int main (int argc, char *argv[])
 Main execution of code.  More...
 

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+

+Variables
char err_buffer [MPI_MAX_ERROR_STRING]
 Global err buffer for MPI.  More...
 
int resultlen
 This is the length of the most recent MPI error message, stored int the global error string.  More...
 

+
Detailed Description

+
A simple C example for the ParallelIO Library. 

+
This example creates a netCDF output file with one dimension and one variable. It first writes, then reads the sample file using the ParallelIO library.

+
This example can be run in parallel for 1, 2, 4, 8, or 16 processors. 

+
Macro Definition Documentation

+
+
◆ DIM_LEN

+
+

+

+      
+        
+          
+        
+      
#define DIM_LEN   16

+

+
+
The length of our sample data. 

+
There will be a total of 16 integers in our data, and responsibilty for writing and reading them will be spread between all the processors used to run this example. 

+
+

+

+
+
◆ DIM_NAME

+
+

+

+      
+        
+          
+        
+      
#define DIM_NAME   "x"

+

+
+
The name of the dimension in the netCDF output file. 

+
+

+

+
+
◆ ERR

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
#define ERR( e)

+

+Value:
do {                \
    MPI_Finalize();             \
    return e;               \
    } while (0)

+
Handle non-MPI errors by finalizing the MPI library and exiting with an exit code. 

+
+

+

+
+
◆ ERR_BAD

+
+

+

+      
+        
+          
+        
+      
#define ERR_BAD   1001

+

+
+
Return code when netCDF output file does not match expectations. 

+
+

+

+
+
◆ MPIERR

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
#define MPIERR( e)

+

+Value:
do {                                                  \
    MPI_Error_string(e, err_buffer, &resultlen);            \
    printf("MPI error, line %d, file %s: %s\n", __LINE__, __FILE__, err_buffer); \
    MPI_Finalize();                         \
    return 2;                           \
    } while (0)
err_buffer
char err_buffer[MPI_MAX_ERROR_STRING]
Global err buffer for MPI. 
Definition: example1.c:70

+
resultlen
int resultlen
This is the length of the most recent MPI error message, stored int the global error string...
Definition: example1.c:74

+

+
Handle MPI errors. 

+
This should only be used with MPI library function calls. 

+
+

+

+
+
◆ NDIM

+
+

+

+      
+        
+          
+        
+      
#define NDIM   1

+

+
+
The number of dimensions in the example data. 

+
In this simple example, we are using one-dimensional data. 

+
+

+

+
+
◆ NUM_NETCDF_FLAVORS

+
+

+

+      
+        
+          
+        
+      
#define NUM_NETCDF_FLAVORS   4

+

+
+
The number of possible output netCDF output flavors available to the ParallelIO library. 

+
+

+

+
+
◆ START_DATA_VAL

+
+

+

+      
+        
+          
+        
+      
#define START_DATA_VAL   42

+

+
+
The meaning of life, the universe, and everything. 

+
+

+

+
+
◆ VAR_NAME

+
+

+

+      
+        
+          
+        
+      
#define VAR_NAME   "foo"

+

+
+
The name of the variable in the netCDF output file. 

+
+

+

+
Function Documentation

+
+
◆ check_file()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int check_file (int ntasks, 
char * filename 
)

+

+
+
Check the output file. 

+
Use netCDF to check that the output is as expected.

+
Parameters

+  
+    
+    
+  
ntasksThe number of processors running the example. 
filenameThe name of the example file to check.

+  

+

+
Returns
0 if example file is correct, non-zero otherwise. 

+
< File ID from netCDF.

+
< Number of dimensions.

+
< Number of variables.

+
< Number of global attributes.

+
< ID of unlimited dimension.

+
< Length of the dimension.

+
< Number of variable attributes.

+
< NetCDF data type of this variable.

+
< Return code for function calls.

+
< Dimension ids for this variable.

+
< Name of the dimension.

+
< Name of the variable.

+
< Zero-based index to start read.

+
< Number of elements to read.

+
< Buffer to read in data.

+
< Data values we expect to find. 

+
+

+

+
+
◆ main()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int main (int argc, 
char * argv[] 
)

+

+
+
Main execution of code. 

+
Executes the functions to:
    
+
  • create a new examplePioClass instance
    • 
+
  • initialize MPI and the ParallelIO libraries
    • 
+
  • create the decomposition for this example
    • 
+
  • create the netCDF output file
    • 
+
  • define the variable in the file
    • 
+
  • write data to the variable in the file using decomposition
    • 
+
  • read the data back from the file using decomposition
    • 
+
  • close the file
    • 
+
  • clean up resources
    • 
+

+
The example can be run from the command line (on system that support it) like this: 
+mpiexec -n 4 ./examplePio
+
The sample file created by this program is a small netCDF file. It has the following contents (as shown by ncdump) for a 4-processor run:

+
+netcdf examplePio_c {
+dimensions:
+x = 16 ;
+variables:
+int foo(x) ;
+data:
foo = 42, 42, 42, 42, 43, 43, 43, 43, 44, 44, 44, 44, 45, 45, 45, 45 ;
+}
+
Parameters

+  
+    
+    
+  
[in]argcargument count (should be zero) 
[in]argvargument array (should be NULL) 

+  

+

+
Return values

+  
+    
+  
examplePioClass*Pointer to self. 

+  

+

+
Set to non-zero to get output to stdout.

+
Zero-based rank of processor.

+
Number of processors involved in current execution.

+
Different output flavors. The example file is written (and then read) four times. The first two flavors, parallel-netcdf, and netCDF serial, both produce a netCDF classic format file (but with different libraries). The last two produce netCDF4/HDF5 format files, written with and without using netCDF-4 parallel I/O.

+
Number of processors that will do IO. In this example we will do IO from all processors.

+
Stride in the mpi rank between io tasks. Always 1 in this example.

+
Zero based rank of first processor to be used for I/O.

+
The dimension ID.

+
Array index per processing unit. This is the number of elements of the data array that will be handled by each processor. In this example there are 16 data elements. If the example is run on 4 processors, then arrIdxPerPe will be 4.

+
The ID for the parallel I/O system. It is set by PIOc_Init_Intracomm(). It references an internal structure containing the general IO subsystem data and MPI structure. It is passed to PIOc_finalize() to free associated resources, after all I/O, but before MPI_Finalize is called.

+
The ncid of the netCDF file created in this example.

+
The ID of the netCDF varable in the example file.

+
The I/O description ID as passed back by PIOc_InitDecomp() and freed in PIOc_freedecomp().

+
A buffer for sample data. The size of this array will vary depending on how many processors are involved in the execution of the example code. It's length will be the same as elements_per_pe.

+
A 1-D array which holds the decomposition mapping for this example. The size of this array will vary depending on how many processors are involved in the execution of the example code. It's length will be the same as elements_per_pe.

+
Test filename.

+
The number of netCDF flavors available in this build.

+
Used for command line processing.

+
Return value. 

+
+

+

+
Variable Documentation

+
+
◆ err_buffer

+
+

+

+      
+        
+          
+        
+      
char err_buffer[MPI_MAX_ERROR_STRING]

+

+
+
Global err buffer for MPI. 

+
When there is an MPI error, this buffer is used to store the error message that is associated with the MPI error. 

+
+

+

+
+
◆ resultlen

+
+

+

+      
+        
+          
+        
+      
int resultlen

+

+
+
This is the length of the most recent MPI error message, stored int the global error string. 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:07 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/example1_8c__incl.map b/docs/example1_8c__incl.map
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+PIO: example2.c File Reference
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+   
PIO
+    2.4.0
+   

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+Macros |
+Functions |
+Variables  

+  

+
example2.c File Reference
  

+

+

+
+
A simple C example for the ParallelIO Library.  
+More...

+
#include <getopt.h>

+#include <stdio.h>

+#include <stdlib.h>

+#include <unistd.h>

+#include <mpi.h>

+#include <pio.h>

+#include <math.h>

+

+Include dependency graph for example2.c:

+

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+Macros
#define NUM_NETCDF_FLAVORS   4
 The number of possible output netCDF output flavors available to the ParallelIO library.  More...
 
#define NDIM   3
 The number of dimensions in the example data.  More...
 
#define NUM_TIMESTEPS   6
 The number of timesteps of data to write.  More...
 
#define VAR_NAME   "foo"
 The name of the variable in the netCDF output file.  More...
 
#define ERR_BAD   1001
 Return code when netCDF output file does not match expectations.  More...
 
#define START_DATA_VAL   42
 The meaning of life, the universe, and everything.  More...
 
#define MPIERR(e)
 Handle MPI errors.  More...
 
#define ERR(e)
 Handle non-MPI errors by finalizing the MPI library and exiting with an exit code.  More...
 
#define NUM_EVENTS   10
 Number of MPE events.  More...
 
#define X_DIM_LEN   20
 The length of our sample data along each dimension.  More...
 

+#define Y_DIM_LEN   30
 
#define ERR_FILE   1
 Some error codes for when things go wrong.  More...
 

+#define ERR_DUMB   2
 

+#define ERR_ARG   3
 

+#define ERR_MPI   4
 

+#define ERR_MPITYPE   5
 

+#define ERR_LOGGING   6
 

+#define ERR_UPDATE   7
 

+#define ERR_CALC   8
 

+#define ERR_COUNT   9
 

+#define ERR_WRITE   10
 

+#define ERR_SWAP   11
 

+#define ERR_INIT   12
 

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+Functions
int init_logging (int my_rank, int event_num[][NUM_EVENTS])
 This will set up the MPE logging event numbers.  More...
 
int check_file (int ntasks, char *filename)
 Check the output file.  More...
 
int calculate_value (int my_rank, int timestep, float *datap)
 Calculate sample data.  More...
 
int main (int argc, char *argv[])
 Main execution of code.  More...
 

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+Variables
char err_buffer [MPI_MAX_ERROR_STRING]
 Global err buffer for MPI.  More...
 
int resultlen
 This is the length of the most recent MPI error message, stored int the global error string.  More...
 
char dim_name [NDIM][NC_MAX_NAME+1] = {"timestep", "x", "y"}
 The dimension names.  More...
 
int dim_len [NDIM] = {NC_UNLIMITED, X_DIM_LEN, Y_DIM_LEN}
 Length of the dimensions in the sample data.  More...
 
PIO_Offset chunksize [NDIM] = {2, X_DIM_LEN/2, Y_DIM_LEN/2}
 Length of chunksizes to use in netCDF-4 files.  More...
 

+
Detailed Description

+
A simple C example for the ParallelIO Library. 

+
This example creates a netCDF output file with one 3D variable. One of the dimensions will be unlimited. The example first writes the sample file using the ParallelIO library, then reads it with the plain old netCDF library to check that it is correct.

+
This example can be run in parallel for 1, 2, 4, 8, or 16 processors.

+
This example uses the MPE performace profiling library, if it is present on the build machine. After the program is run, MPE will produce a file called example2.clog2. In order to see the nice graphs, execute the commands:

+
+clog2ToSlog2 example2.clog2
+jumpshot example2.slog2 
+
 
Macro Definition Documentation

+
+
◆ ERR

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
#define ERR( e)

+

+Value:
do {                \
        fprintf(stderr, "Error %d in %s, line %d\n", e, __FILE__, __LINE__); \
    MPI_Finalize();             \
    return e;               \
    } while (0)

+
Handle non-MPI errors by finalizing the MPI library and exiting with an exit code. 

+
+

+

+
+
◆ ERR_BAD

+
+

+

+      
+        
+          
+        
+      
#define ERR_BAD   1001

+

+
+
Return code when netCDF output file does not match expectations. 

+
+

+

+
+
◆ ERR_FILE

+
+

+

+      
+        
+          
+        
+      
#define ERR_FILE   1

+

+
+
Some error codes for when things go wrong. 

+
+

+

+
+
◆ MPIERR

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
#define MPIERR( e)

+

+Value:
do {                                                  \
    MPI_Error_string(e, err_buffer, &resultlen);            \
    fprintf(stderr, "MPI error, line %d, file %s: %s\n", __LINE__, __FILE__, err_buffer); \
    MPI_Finalize();                         \
    return 2;                           \
    } while (0)
resultlen
int resultlen
This is the length of the most recent MPI error message, stored int the global error string...
Definition: example2.c:92

+
err_buffer
char err_buffer[MPI_MAX_ERROR_STRING]
Global err buffer for MPI. 
Definition: example2.c:88

+

+
Handle MPI errors. 

+
This should only be used with MPI library function calls. 

+
+

+

+
+
◆ NDIM

+
+

+

+      
+        
+          
+        
+      
#define NDIM   3

+

+
+
The number of dimensions in the example data. 

+
In this example, we are using three-dimensional data. 

+
+

+

+
+
◆ NUM_EVENTS

+
+

+

+      
+        
+          
+        
+      
#define NUM_EVENTS   10

+

+
+
Number of MPE events. 

+
The start and stop of each event will be tracked, and graphed. This value is used outside of HAVE_MPE ifdefs. 

+
+

+

+
+
◆ NUM_NETCDF_FLAVORS

+
+

+

+      
+        
+          
+        
+      
#define NUM_NETCDF_FLAVORS   4

+

+
+
The number of possible output netCDF output flavors available to the ParallelIO library. 

+
+

+

+
+
◆ NUM_TIMESTEPS

+
+

+

+      
+        
+          
+        
+      
#define NUM_TIMESTEPS   6

+

+
+
The number of timesteps of data to write. 

+
+

+

+
+
◆ START_DATA_VAL

+
+

+

+      
+        
+          
+        
+      
#define START_DATA_VAL   42

+

+
+
The meaning of life, the universe, and everything. 

+
+

+

+
+
◆ VAR_NAME

+
+

+

+      
+        
+          
+        
+      
#define VAR_NAME   "foo"

+

+
+
The name of the variable in the netCDF output file. 

+
+

+

+
+
◆ X_DIM_LEN

+
+

+

+      
+        
+          
+        
+      
#define X_DIM_LEN   20

+

+
+
The length of our sample data along each dimension. 

+
There will be a total of 16 integers in each timestep of our data, and responsibilty for writing and reading them will be spread between all the processors used to run this example. 

+
+

+

+
Function Documentation

+
+
◆ calculate_value()

+
+

+

+      
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int calculate_value (int my_rank, 
int timestep, 
float * datap 
)

+

+
+
Calculate sample data. 

+
This function is deliberately slow in order to take up some time calculating. 
Parameters

+  
+    
+    
+    
+  
my_rankthe rank of the processor running the code. 
timestepthe timestep. 
datappointer where we should write datum.

+  

+

+
Returns
zero for success, non-zero otherwise. 

+
+

+

+
+
◆ check_file()

+
+

+

+      
+        
+          
+          
+          
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+        
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+          
+          
+          
+          
+        
+        
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+          
+          
+        
+      
int check_file (int ntasks, 
char * filename 
)

+

+
+
Check the output file. 

+
Use netCDF to check that the output is as expected.

+
Parameters

+  
+    
+    
+  
ntasksThe number of processors running the example. 
filenameThe name of the example file to check.

+  

+

+
Returns
0 if example file is correct, non-zero otherwise. 

+
< File ID from netCDF.

+
< Number of dimensions.

+
< Number of variables.

+
< Number of global attributes.

+
< ID of unlimited dimension.

+
< Length of the dimension.

+
< Number of variable attributes.

+
< NetCDF data type of this variable.

+
< Return code for function calls.

+
< Dimension ids for this variable.

+
< Name of the dimension.

+
< Name of the variable.

+
< Zero-based index to start read.

+
< Number of elements to read.

+
< Buffer to read in data.

+
< Data values we expect to find. 

+
+

+

+
+
◆ init_logging()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int init_logging (int my_rank, 
int event_num[][NUM_EVENTS] 
)

+

+
+
This will set up the MPE logging event numbers. 

+
Parameters

+  
+    
+    
+  
my_rankthe rank of the processor running the code. 
event_numarray of MPE event numbers.

+  

+

+
Returns
0 for success, non-zero for failure. 

+
+

+

+
+
◆ main()

+
+

+

+      
+        
+          
+          
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+        
+        
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+          
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+        
+      
int main (int argc, 
char * argv[] 
)

+

+
+
Main execution of code. 

+
Executes the functions to:
    
+
  • create a new examplePioClass instance
    • 
+
  • initialize MPI and the ParallelIO libraries
    • 
+
  • create the decomposition for this example
    • 
+
  • create the netCDF output file
    • 
+
  • define the variable in the file
    • 
+
  • write data to the variable in the file using decomposition
    • 
+
  • read the data back from the file using decomposition
    • 
+
  • close the file
    • 
+
  • clean up resources
    • 
+

+
The example can be run from the command line (on system that support it) like this: 
+mpiexec -n 4 ./examplePio
+
The sample file created by this program is a small netCDF file. It has the following contents (as shown by ncdump) for a 4-processor run:

+
+netcdf examplePio_c {
+dimensions:
+x = 16 ;
+variables:
+int foo(x) ;
+data:
foo = 42, 42, 42, 42, 43, 43, 43, 43, 44, 44, 44, 44, 45, 45, 45, 45 ;
+}
+
Parameters

+  
+    
+    
+  
[in]argcargument count (should be zero) 
[in]argvargument array (should be NULL) 

+  

+

+
Return values

+  
+    
+  
examplePioClass*Pointer to self. 

+  

+

+
Set to non-zero to get output to stdout.

+
Zero-based rank of processor.

+
Number of processors involved in current execution.

+
Different output flavors. The example file is written (and then read) four times. The first two flavors, parallel-netcdf, and netCDF serial, both produce a netCDF classic format file (but with different libraries). The last two produce netCDF4/HDF5 format files, written with and without using netCDF-4 parallel I/O.

+
Names for the output files. Two of them (pnetcdf and classic) will be in classic netCDF format, the others (serial4 and parallel4) will be in netCDF-4/HDF5 format. All four can be read by the netCDF library, and all will contain the same contents.

+
Number of processors that will do IO. In this example we will do IO from all processors.

+
Stride in the mpi rank between io tasks. Always 1 in this example.

+
Number of the aggregator? Always 0 in this example.

+
Zero based rank of first processor to be used for I/O.

+
Specifies the flavor of netCDF output format.

+
The dimension IDs.

+
Array index per processing unit. This is the number of elements of the data array that will be handled by each processor. In this example there are 16 data elements. If the example is run on 4 processors, then arrIdxPerPe will be 4.

+
The ID for the parallel I/O system. It is set by PIOc_Init_Intracomm(). It references an internal structure containing the general IO subsystem data and MPI structure. It is passed to PIOc_finalize() to free associated resources, after all I/O, but before MPI_Finalize is called.

+
The ncid of the netCDF file created in this example.

+
The ID of the netCDF varable in the example file.

+
The I/O description ID as passed back by PIOc_InitDecomp() and freed in PIOc_freedecomp().

+
A buffer for sample data. The size of this array will vary depending on how many processors are involved in the execution of the example code. It's length will be the same as elements_per_pe.

+
A buffer for reading data back from the file. The size of this array will vary depending on how many processors are involved in the execution of the example code. It's length will be the same as elements_per_pe.

+
A 1-D array which holds the decomposition mapping for this example. The size of this array will vary depending on how many processors are involved in the execution of the example code. It's length will be the same as elements_per_pe.

+
Needed for command line processing. 

+
+

+

+
Variable Documentation

+
+
◆ chunksize

+
+

+

+      
+        
+          
+        
+      
PIO_Offset chunksize[NDIM] = {2, X_DIM_LEN/2, Y_DIM_LEN/2}

+

+
+
Length of chunksizes to use in netCDF-4 files. 

+
+

+

+
+
◆ dim_len

+
+

+

+      
+        
+          
+        
+      
int dim_len[NDIM] = {NC_UNLIMITED, X_DIM_LEN, Y_DIM_LEN}

+

+
+
Length of the dimensions in the sample data. 

+
+

+

+
+
◆ dim_name

+
+

+

+      
+        
+          
+        
+      
char dim_name[NDIM][NC_MAX_NAME+1] = {"timestep", "x", "y"}

+

+
+
The dimension names. 

+
+

+

+
+
◆ err_buffer

+
+

+

+      
+        
+          
+        
+      
char err_buffer[MPI_MAX_ERROR_STRING]

+

+
+
Global err buffer for MPI. 

+
When there is an MPI error, this buffer is used to store the error message that is associated with the MPI error. 

+
+

+

+
+
◆ resultlen

+
+

+

+      
+        
+          
+        
+      
int resultlen

+

+
+
This is the length of the most recent MPI error message, stored int the global error string. 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:07 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/example2_8c__incl.map b/docs/example2_8c__incl.map
new file mode 100644
index 00000000000..5954de96525
--- /dev/null
+++ b/docs/example2_8c__incl.map
@@ -0,0 +1,3 @@
+
+
+
diff --git a/docs/example2_8c__incl.md5 b/docs/example2_8c__incl.md5
new file mode 100644
index 00000000000..b976a8f4ce9
--- /dev/null
+++ b/docs/example2_8c__incl.md5
@@ -0,0 +1 @@
+859389a04a3976b66e38e403dd77936a
\ No newline at end of file
diff --git a/docs/example2_8c__incl.png b/docs/example2_8c__incl.png
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zg9bcre)+;#CZrX_h2GehdDlX
+
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+
+PIO: examplePio.c File Reference
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+  
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+ 
+

+   
PIO
+    2.4.0
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+  

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+

+  

+Typedefs |
+Functions  

+  

+
examplePio.c File Reference
  

+

+

+
+
A simple C example for the ParallelIO Library.  
+More...

+
#include "config.h"

+#include <getopt.h>

+#include <stdio.h>

+#include <stdlib.h>

+#include <unistd.h>

+#include <mpi.h>

+#include <pio.h>

+

+Include dependency graph for examplePio.c:

+

+

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+

+

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+

+Typedefs
typedef struct examplePioClass examplePioClass
 Holds code and data for this example.  More...
 

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+Functions
struct examplePioClass * epc_init (struct examplePioClass *this)
 Initialize libraries, create sample data.  More...
 
struct examplePioClass * epc_createDecomp (struct examplePioClass *this)
 Create the decomposition.  More...
 
struct examplePioClass * epc_createFile (struct examplePioClass *this)
 Create the netCDF file.  More...
 
struct examplePioClass * epc_defineVar (struct examplePioClass *this)
 Define netCDF metadata.  More...
 
struct examplePioClass * epc_writeVar (struct examplePioClass *this)
 Write the sample data to the file.  More...
 
struct examplePioClass * epc_readVar (struct examplePioClass *this)
 Read the example data from the file.  More...
 
struct examplePioClass * epc_closeFile (struct examplePioClass *this)
 Closes the netCDF file.  More...
 
struct examplePioClass * epc_cleanUp (struct examplePioClass *this)
 Clean up allocated resources.  More...
 
struct examplePioClass * epc_errorHandler (struct examplePioClass *this, const char *errMsg, const int retVal)
 Error handling function.  More...
 
struct examplePioClass * epc_new (int verbose)
 Create an examplePioClass object.  More...
 
int main (int argc, char *argv[])
 Main execution of code.  More...
 

+
Detailed Description

+
A simple C example for the ParallelIO Library. 

+
This example creates a netCDF output file with one dimension and one variable. It first writes, then reads the sample file using the ParallelIO library.

+
This example can be run in parallel for 1, 2, 4, 8, or 16 processors. 

+
Typedef Documentation

+
+
◆ examplePioClass

+
+

+

+      
+        
+          
+        
+      
typedef struct examplePioClass  examplePioClass

+

+
+
Holds code and data for this example. 

+
This struct stores pointers to the functions used in the example, and all the data values needed to run the example code. 

+
+

+

+
Function Documentation

+
+
◆ epc_cleanUp()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
struct examplePioClass* epc_cleanUp (struct examplePioClass * this)

+

+
+
Clean up allocated resources. 

+
This function frees the memory used in this example. It calls the ParallelIO library function PIOc_freedecomp() to free decomposition resources. Then calles PIOc_finalize() and MPI_finalize() to free library resources.

+
Parameters

+  
+    
+  
[in]thisPointer to self. 

+  

+

+
Return values

+  
+    
+  
examplePioClass*Pointer to self. 

+  

+

+
+

+

+
+
◆ epc_closeFile()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
struct examplePioClass* epc_closeFile (struct examplePioClass * this)

+

+
+
Closes the netCDF file. 

+
Uses the PIOc_closefile() function to close the netCDF sample file written by this example.

+
Parameters

+  
+    
+  
[in]thisPointer to self. 

+  

+

+
Return values

+  
+    
+  
examplePioClass*Pointer to self. 

+  

+

+
+

+

+
+
◆ epc_createDecomp()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
struct examplePioClass* epc_createDecomp (struct examplePioClass * this)

+

+
+
Create the decomposition. 

+
This function is called as part of the creation of a sample data file for this example.

+
Uses PIOc_InitDecomp() to initalize the decomposition for this example. The arguments are:
    
+
  • the ID of the IO system, obtained from PIOc_init_intracomm().
    • 
+
  • the NetCDF type of the sample data - in this case a 4-byte integer.
    • 
+
  • the number of dimensions (1).
    • 
+
  • the lengths of the dimensions.
    • 
+
  • the number of data elements assigned to each processor.
    • 
+
  • the array which provides the decomposition mapping.
    • 
+
  • the IO description pointer.
    • 
+
  • the ParallelIO rearranger (we are providing NULL here to get the default arranger).
    • 
+
  • optional array of start values for block cyclic decompositions (NULL means don't use block cyclical decompositions).
    • 
+
  • optional array of count values for block cyclic decompositions (NULL means don't use block cyclical decompositions).
    • 
+

+
The decomposition mapping array (called compdof, in this example code), contains a 1 based array of offsets into the array record on file. For this example, the compdof array will have the following sizes and values, depending on number of processors used.

+
For one processor the decomposition array looks like this (note that the array is 1-based):

+
+rank: 0 length: 16 [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16]
+
For two processors, the decomposition array looks like this on each processor:

+
+rank: 0 length: 8 [1, 2, 3, 4, 5, 6, 7, 8]
+rank: 1 length: 8 [9, 10, 11, 12, 13, 14, 15, 16]
+
For four processors, the decomposition arrays are:

+
+rank: 0 length: 4 [1, 2, 3, 4]
+rank: 1 length: 4 [5, 6, 7, 8]
+rank: 2 length: 4 [9, 10, 11, 12]
+rank: 3 length: 4 [13, 14, 15, 16]
+
Parameters

+  
+    
+  
[in]thisPointer to self. 

+  

+

+
Return values

+  
+    
+  
examplePioClass*Pointer to self. 

+  

+

+
+

+

+
+
◆ epc_createFile()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
struct examplePioClass* epc_createFile (struct examplePioClass * this)

+

+
+
Create the netCDF file. 

+
This function is called as part of the creation of a sample data file for this example.

+
Uses the function PIOc_createfile() to create the netCDF output file. The format of the file is created in accordance with the iotype member variable, which specifies one of the following values:

+
    
+
  • PIO_IOTYPE_PNETCDF=1 Parallel Netcdf (parallel)
    • 
+
  • PIO_IOTYPE_NETCDF=2 Netcdf3 Classic format (serial)
    • 
+
  • PIO_IOTYPE_NETCDF4C=3 NetCDF4 (HDF5) compressed format (serial)
    • 
+
  • PIO_IOTYPE_NETCDF4P=4 NetCDF4 (HDF5) parallel
    • 
+

+
The PIOc_createfile() function has the following parameters:

+
    
+
  • The IO system ID as set by PIOc_init_intracomm().
    • 
+
  • A pointer which will get the ncid of this file when it is created.
    • 
+
  • The iotype (one of the values listed above).
    • 
+
  • the name of the sample file.
    • 
+
  • the NetCDF file creating mode, PIO_CLOBBER means overwrite any existing file with this name.
    • 
+

+
Parameters

+  
+    
+  
[in]thisPointer to self. 

+  

+

+
Return values

+  
+    
+  
examplePioClass*Pointer to self. 

+  

+

+
+

+

+
+
◆ epc_defineVar()

+
+

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+          
+          
+        
+      
struct examplePioClass* epc_defineVar (struct examplePioClass * this)

+

+
+
Define netCDF metadata. 

+
This function is called as part of the creation of a sample data file for this example.

+
It defines a dimension and a one-dimensional variable in the netCDF file using functions PIOc_def_dim() and PIOc_def_var(). It then calls PIOc_enddef() to end the define mode of the file.

+
All of the functions take the pioFileDesc returned by PIOc_createfile(). This is the ncid of the netCDF file.

+
Parameters

+  
+    
+  
[in]thisPointer to self. 

+  

+

+
Return values

+  
+    
+  
examplePioClass*Pointer to self. 

+  

+

+
+

+

+
+
◆ epc_errorHandler()

+
+

+

+      
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+      
struct examplePioClass* epc_errorHandler (struct examplePioClass * this, 
const char * errMsg, 
const int retVal 
)

+

+
+
Error handling function. 

+
On error, process with rank zero will print error message, the netCDF file will be closed with PIOc_closefile(), and MPI_Abort is called to end the example execution on all processes.

+
Parameters

+  
+    
+    
+    
+  
[in]thisPointer to self. 
[in]errMsgan error message 
[in]retValthe non-zero return value that indicated an error 

+  

+

+
Return values

+  
+    
+  
examplePioClass*Pointer to self. 

+  

+

+
+

+

+
+
◆ epc_init()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
struct examplePioClass* epc_init (struct examplePioClass * this)

+

+
+
Initialize libraries, create sample data. 

+
This function is called as part of the creation of a sample data file for this example.

+
Ths funtion initializes MPI and the ParallelIO libraries. It sets up the ParallelIO library communicator. It also allocates memory for data used in this example, and assigns sample values to the data array that will be written.

+
The ParallelIO communicator is set up with a call to PIOc_Init_Intracomm(). This call takes the following parameters:

+
    
+
  • The MPI communicator specifying the invovled processors (MPI_COMM_WORLD, in this case, to use all processors).
    • 
+
  • The number of I/O tasks. In this example there will be one I/O task for each process.
    • 
+
  • The stride (1 in this case).
    • 
+
  • The index of the first I/O task.
    • 
+
  • The iotype, specifying the flavor of netCDF to use.
    • 
+
  • Specify the subset rearranger.
    • 
+
  • A pointer that will get the ID of the ParallelIO system created for this call. This ID will be needed when reading or writing to the file using the ParallelIO library.
    • 
+

+
Parameters

+  
+    
+  
[in]thisPointer to self. 

+  

+

+
Return values

+  
+    
+  
examplePioClass*Pointer to self. 

+  

+

+
+

+

+
+
◆ epc_new()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
struct examplePioClass* epc_new (int verbose)

+

+
+
Create an examplePioClass object. 

+
This function allocates memory for the struct that contains the code and data for this example. Then pointers are to the functions used in the example.

+
Parameters

+  
+    
+  
[in]verboseNon-zero for output to stdout. 

+  

+

+
Return values

+  
+    
+  
examplePioClass*Pointer to self. 

+  

+

+
+

+

+
+
◆ epc_readVar()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
struct examplePioClass* epc_readVar (struct examplePioClass * this)

+

+
+
Read the example data from the file. 

+
This function is called as part of the creation of a sample data file for this example.

+
This function reads the data that has been written to the sample data file. The data are read with the PIOc_read_darray() function.

+
Parameters

+  
+    
+  
[in]thisPointer to self. 

+  

+

+
Return values

+  
+    
+  
examplePioClass*Pointer to self. 

+  

+

+
+

+

+
+
◆ epc_writeVar()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
struct examplePioClass* epc_writeVar (struct examplePioClass * this)

+

+
+
Write the sample data to the file. 

+
This function is called as part of the creation of a sample data file for this example.

+
The data are written with the PIOc_write_darray() function. After the write is complete, ensure the file is synced for all processes after the write.

+
Parameters

+  
+    
+  
[in]thisPointer to self. 

+  

+

+
Return values

+  
+    
+  
examplePioClass*Pointer to self. 

+  

+

+
+

+

+
+
◆ main()

+
+

+

+      
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+          
+          
+        
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+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int main (int argc, 
char * argv[] 
)

+

+
+
Main execution of code. 

+
Executes the functions to:
    
+
  • create a new examplePioClass instance
    • 
+
  • initialize MPI and the ParallelIO libraries
    • 
+
  • create the decomposition for this example
    • 
+
  • create the netCDF output file
    • 
+
  • define the variable in the file
    • 
+
  • write data to the variable in the file using decomposition
    • 
+
  • read the data back from the file using decomposition
    • 
+
  • close the file
    • 
+
  • clean up resources
    • 
+

+
The example can be run from the command line (on system that support it) like this: 
+mpiexec -n 4 ./examplePio
+
The sample file created by this program is a small netCDF file. It has the following contents (as shown by ncdump) for a 4-processor run:

+
+netcdf examplePio_c {
+dimensions:
+    x = 16 ;
+variables:
+    int foo(x) ;
+data:
    foo = 42, 42, 42, 42, 43, 43, 43, 43, 44, 44, 44, 44, 45, 45, 45, 45 ;
+}
+
Parameters

+  
+    
+    
+  
[in]argcargument count (should be zero) 
[in]argvargument array (should be NULL) 

+  

+

+
Return values

+  
+    
+  
examplePioClass*Pointer to self. 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:07 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/example_pio_8c__incl.map b/docs/example_pio_8c__incl.map
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diff --git a/docs/example_pio_8c__incl.md5 b/docs/example_pio_8c__incl.md5
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diff --git a/docs/example_pio_8f90.html b/docs/example_pio_8f90.html
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+
+
+
+
+
+
+
+PIO: examplePio.f90 File Reference
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+Data Types |
+Functions/Subroutines  

+  

+
examplePio.f90 File Reference
  

+

+

+
+
A simple Fortran example for the ParallelIO Library.  
+More...

+
+
+
+
+
+

+Data Types
type  pioexample::pioexampleclass
 A class to hold example code and data.  More...
 

+
+
+
+
+
+
+
+

+Functions/Subroutines
subroutine pioexample::init (this)
 Initialize MPI, ParallelIO, and example data.  More...
 
program main
 Main execution of example code.  More...
 

+
Detailed Description

+
A simple Fortran example for the ParallelIO Library. 

+
Function/Subroutine Documentation

+
+
◆ init()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
subroutine pioexample::init (class(pioexampleclass), intent(inout) this)

+

+
+
Initialize MPI, ParallelIO, and example data. 

+
Initialize the MPI and ParallelIO libraries. Also allocate memory to write and read the sample data to the netCDF file. 

+
+

+

+
+
◆ main()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+      
program main ()

+

+
+
Main execution of example code. 

+
This is an example program for the ParallelIO library.

+
This program creates a netCDF output file with the ParallelIO library, then writes and reads some data to and from the file.

+
This example does the following:

+
+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:07 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/faq.html b/docs/faq.html
new file mode 100644
index 00000000000..d0e4e8a542f
--- /dev/null
+++ b/docs/faq.html
@@ -0,0 +1,89 @@
+
+
+
+
+
+
+
+PIO: Frequently Asked Questions
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+

+

+  

+
Frequently Asked Questions 
  

+

+

+
Here is a list of frequently asked questions and their answers. 

+
How do I specify which tasks perform IO?  

+
This is done in the call to PIO_init which has two interfaces: init_intracom and init_intercom. 
    
+
  • 
+In the init_intracom interface, use the num_iotasks and stride variables to specify the total number of io tasks and the stride between them with respect to the mpi communicator, comp_comm, which is provided. You can also use the optional base argument to shift the first IO task away from the first computational task, this is often desirable because the applications first computational task often has higher memory requirements than other tasks. IO tasks are a subset of the tasks defined in comp_comm. 
    • 
+
  • 
+In the init_intercom interface, IO tasks are a disjoint set of tasks from those in the computational communicator. This interface is still experimental and not recommended for production use at this time.  
    • 
+

+Note that num_iotasks is the maximum number of IO tasks to use for an IO operation. The size of the field being read or written along with the tunable blocksize parameter, PIO_set_blocksize, determines the actual number of tasks used for a given IO operation.  

+
How do I test if PIO is installed and working correctly?  

+
The PIO Library distribution contains a testpio subdirectory with a number of programs to test the PIO library. Please see the Examples page for details. 

+

+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/files.html b/docs/files.html
new file mode 100644
index 00000000000..2054f77963f
--- /dev/null
+++ b/docs/files.html
@@ -0,0 +1,102 @@
+
+
+
+
+
+
+
+PIO: File List
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+
File List
  

+

+

+
Here is a list of all documented files with brief descriptions:

+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
 dtypes.h
 example1.cA simple C example for the ParallelIO Library 
 example2.cA simple C example for the ParallelIO Library 
 examplePio.cA simple C example for the ParallelIO Library 
 examplePio.f90A simple Fortran example for the ParallelIO Library 
 pio.F90User interface Module for PIO, this is the only file a user program should 'use' 
 pio.hPublic headers for the PIO C interface 
 pio_darray.cPublic functions that read and write distributed arrays in PIO 
 pio_file.cPIO File Handling 
 pio_get_nc.cPIO functions to get data (excluding varm functions) 
 pio_kinds.F90Basic data types 
 pio_nc.cPIO interfaces to NetCDF support functions 
 pio_nc4.cFunctions to wrap netCDF-4 functions for PIO 
 pio_put_nc.cPIO functions to write data 
 pio_support.F90Internal code for compiler workarounds, aborts and debug functions 
 pio_types.F90Derived datatypes and constants for PIO Fortran API 
 pioc.cSome initialization and support functions 
 pioc_sc.cCompute start and count arrays for the box rearranger 
 piodarray.F90Read and write routines for decomposed data 
 piolib_mod.F90Initialization Routines for PIO 
 pionfatt_mod.F90NetCDF attribute interface to PIO 
 pionfget_mod.F90Read Routines for non-decomposed NetCDF data 
 pionfput_mod.F90Write routines for non-decomposed NetCDF data 

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
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diff --git a/docs/globals.html b/docs/globals.html
new file mode 100644
index 00000000000..4b88b3a38b5
--- /dev/null
+++ b/docs/globals.html
@@ -0,0 +1,79 @@
+
+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- b -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_c.html b/docs/globals_c.html
new file mode 100644
index 00000000000..c7a76361336
--- /dev/null
+++ b/docs/globals_c.html
@@ -0,0 +1,91 @@
+
+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- c -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_d.html b/docs/globals_d.html
new file mode 100644
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--- /dev/null
+++ b/docs/globals_d.html
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+PIO: File Members
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+
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+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- d -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_defs.html b/docs/globals_defs.html
new file mode 100644
index 00000000000..06cf35fd9a4
--- /dev/null
+++ b/docs/globals_defs.html
@@ -0,0 +1,149 @@
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+PIO: File Members
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+

+

+
+ 
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+   
PIO
+    2.4.0
+   

+  

+

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+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+ 
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_e.html b/docs/globals_e.html
new file mode 100644
index 00000000000..90119ff213e
--- /dev/null
+++ b/docs/globals_e.html
@@ -0,0 +1,123 @@
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+
+PIO: File Members
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+
+
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+
+
+
+
+
+

+

+
+ 
+ 
+  
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+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- e -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_enum.html b/docs/globals_enum.html
new file mode 100644
index 00000000000..95108d4da45
--- /dev/null
+++ b/docs/globals_enum.html
@@ -0,0 +1,88 @@
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+
+PIO: File Members
+
+
+
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+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
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+
+

+
+

+

+
+
+

+
+

+
+

+ 
    
+
  • PIO_ERROR_HANDLERS
+: pio.h
+
    • 
+
  • PIO_IOTYPE
+: pio.h
+
    • 
+
  • PIO_REARR_COMM_FC_DIR
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    • 
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+
    • 
+
  • PIO_REARRANGERS
+: pio.h
+
    • 
+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_eval.html b/docs/globals_eval.html
new file mode 100644
index 00000000000..82abb952bc8
--- /dev/null
+++ b/docs/globals_eval.html
@@ -0,0 +1,118 @@
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+
+PIO: File Members
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+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+ 
    
+
  • PIO_BCAST_ERROR
+: pio.h
+
    • 
+
  • PIO_INTERNAL_ERROR
+: pio.h
+
    • 
+
  • PIO_IOTYPE_NETCDF
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    • 
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  • PIO_IOTYPE_NETCDF4C
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    • 
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  • PIO_IOTYPE_PNETCDF
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    • 
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  • PIO_REARR_COMM_FC_1D_IO2COMP
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    • 
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    • 
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  • PIO_REARR_COMM_FC_2D_ENABLE
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    • 
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  • PIO_REARR_COMM_P2P
+: pio.h
+
    • 
+
  • PIO_REARR_SUBSET
+: pio.h
+
    • 
+
  • PIO_RETURN_ERROR
+: pio.h
+
    • 
+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_f.html b/docs/globals_f.html
new file mode 100644
index 00000000000..40165580a2a
--- /dev/null
+++ b/docs/globals_f.html
@@ -0,0 +1,81 @@
+
+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- f -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_func.html b/docs/globals_func.html
new file mode 100644
index 00000000000..8731e4adda2
--- /dev/null
+++ b/docs/globals_func.html
@@ -0,0 +1,88 @@
+
+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+ 
+
+
- c -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_func_e.html b/docs/globals_func_e.html
new file mode 100644
index 00000000000..f9704643ae4
--- /dev/null
+++ b/docs/globals_func_e.html
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+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+ 
+
+
- e -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_func_f.html b/docs/globals_func_f.html
new file mode 100644
index 00000000000..7bb2d72c8eb
--- /dev/null
+++ b/docs/globals_func_f.html
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+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+ 
+
+
- f -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_func_g.html b/docs/globals_func_g.html
new file mode 100644
index 00000000000..a05783abdad
--- /dev/null
+++ b/docs/globals_func_g.html
@@ -0,0 +1,81 @@
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+
+
+
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+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+ 
+
+
- g -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_func_i.html b/docs/globals_func_i.html
new file mode 100644
index 00000000000..af437d62570
--- /dev/null
+++ b/docs/globals_func_i.html
@@ -0,0 +1,78 @@
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+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+ 
+
+
- i -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_func_l.html b/docs/globals_func_l.html
new file mode 100644
index 00000000000..1718933fb82
--- /dev/null
+++ b/docs/globals_func_l.html
@@ -0,0 +1,81 @@
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+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+ 
+
+
- l -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_func_m.html b/docs/globals_func_m.html
new file mode 100644
index 00000000000..f1b48b99e03
--- /dev/null
+++ b/docs/globals_func_m.html
@@ -0,0 +1,81 @@
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+
+
+
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+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+ 
+
+
- m -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_func_p.html b/docs/globals_func_p.html
new file mode 100644
index 00000000000..49f6414bf59
--- /dev/null
+++ b/docs/globals_func_p.html
@@ -0,0 +1,911 @@
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+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+ 
+
+
- p -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_g.html b/docs/globals_g.html
new file mode 100644
index 00000000000..cbcb887a2fb
--- /dev/null
+++ b/docs/globals_g.html
@@ -0,0 +1,81 @@
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+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- g -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_i.html b/docs/globals_i.html
new file mode 100644
index 00000000000..8ed2f9dcc3a
--- /dev/null
+++ b/docs/globals_i.html
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+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- i -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_l.html b/docs/globals_l.html
new file mode 100644
index 00000000000..182f7a8f32d
--- /dev/null
+++ b/docs/globals_l.html
@@ -0,0 +1,81 @@
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+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- l -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_m.html b/docs/globals_m.html
new file mode 100644
index 00000000000..3043bbc4381
--- /dev/null
+++ b/docs/globals_m.html
@@ -0,0 +1,88 @@
+
+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- m -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_n.html b/docs/globals_n.html
new file mode 100644
index 00000000000..5182357f328
--- /dev/null
+++ b/docs/globals_n.html
@@ -0,0 +1,89 @@
+
+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- n -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_p.html b/docs/globals_p.html
new file mode 100644
index 00000000000..d3efd7fedcf
--- /dev/null
+++ b/docs/globals_p.html
@@ -0,0 +1,994 @@
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+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- p -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_r.html b/docs/globals_r.html
new file mode 100644
index 00000000000..91c0a4f7249
--- /dev/null
+++ b/docs/globals_r.html
@@ -0,0 +1,85 @@
+
+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- r -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_s.html b/docs/globals_s.html
new file mode 100644
index 00000000000..5cec727a2b5
--- /dev/null
+++ b/docs/globals_s.html
@@ -0,0 +1,79 @@
+
+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- s -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_type.html b/docs/globals_type.html
new file mode 100644
index 00000000000..6fc39e0d677
--- /dev/null
+++ b/docs/globals_type.html
@@ -0,0 +1,100 @@
+
+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+ 
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
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+PIO: File Members
+
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+
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+
+
+
+
+
+
+

+

+
+ 
+ 
+  
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+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- v -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
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+
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+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+ 
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_w.html b/docs/globals_w.html
new file mode 100644
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+
+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- w -
    
+
  • wmulti_buffer
+: pio.h
+
    • 
+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/globals_x.html b/docs/globals_x.html
new file mode 100644
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--- /dev/null
+++ b/docs/globals_x.html
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+
+
+
+
+
+
+
+PIO: File Members
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+
Here is a list of all documented file members with links to the documentation:

+
+
- x -

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/graph_legend.html b/docs/graph_legend.html
new file mode 100644
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+PIO: Graph Legend
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+
+
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+
+
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+
+

+

+
+ 
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+  
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+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
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+
+

+
+

+

+
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Graph Legend
  

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This page explains how to interpret the graphs that are generated by doxygen.

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Consider the following example: 
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class Invisible { };
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+

+
+

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The boxes in the above graph have the following meaning: 

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The arrows have the following meaning: 

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  • 
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    • 
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  • 
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  • 
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    • 
+
  • 
+A yellow dashed arrow denotes a relation between a template instance and the template class it was instantiated from. The arrow is labelled with the template parameters of the instance. 
    • 
+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
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z6By#^di3(IE`|?BCLMZMaN~s
+
+
+
+
+
+
+PIO: PIO_advanceframe
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_advanceframe
  

+

+

+
+
+
+
+
+

+Functions/Subroutines
subroutine piolib_mod::advanceframe (file, vardesc)
 advances the record dimension of a variable in a netcdf format file or the block address in a binary file  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ advanceframe()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piolib_mod::advanceframe (type(file_desc_t), intent(in) file, 
type(var_desc_t), intent(inout) vardesc 
)

+

+
+
advances the record dimension of a variable in a netcdf format file or the block address in a binary file 

+
Parameters

+  
+    
+  
[in,out]vardescVariable description structure. 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__closefile.html b/docs/group___p_i_o__closefile.html
new file mode 100644
index 00000000000..2a2d255f527
--- /dev/null
+++ b/docs/group___p_i_o__closefile.html
@@ -0,0 +1,112 @@
+
+
+
+
+
+
+
+PIO: PIO_closefile
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_closefile
  

+

+

+
+
+
+
+
+

+Functions/Subroutines
subroutine piolib_mod::closefile (file)
 close a disk file  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ closefile()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
subroutine piolib_mod::closefile (type(file_desc_t) file)

+

+
+
close a disk file 

+
Parameters

+  
+    
+  
fileFile descriptor structure. This structure holds information associated with each open file 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__createfile.html b/docs/group___p_i_o__createfile.html
new file mode 100644
index 00000000000..f4479ca116d
--- /dev/null
+++ b/docs/group___p_i_o__createfile.html
@@ -0,0 +1,220 @@
+
+
+
+
+
+
+
+PIO: PIO_createfile
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_createfile
  

+

+

+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function piolib_mod::createfile (iosystem, file, iotype, fname, amode_in)
 Create a NetCDF or PNetCDF file using PIO.  More...
 
int PIOc_createfile (int iosysid, int *ncidp, int *iotype, const char *filename, int mode)
 Create a new file using pio.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ createfile()

+
+

+

+      
+        
+          
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+      
integer function piolib_mod::createfile (type (iosystem_desc_t), intent(inout), target iosystem, 
type (file_desc_t), intent(out) file, 
integer, intent(in) iotype, 
character(len=*), intent(in) fname, 
integer, intent(in), optional amode_in 
)

+

+
+
Create a NetCDF or PNetCDF file using PIO. 

+
Input parameters are read on comp task 0 and ignored elsewhere 
Parameters

+  
+    
+    
+    
+    
+    
+  
iosystem: A defined pio system descriptor created by a call to PIO_init (see PIO_types) 
file: The returned file descriptor 
iotype: An integer parameter which controls the iotype.
    
+
  • PIO_iotype_pnetcdf : parallel read/write of pNetCDF files (netcdf3)
    • 
+
  • PIO_iotype_netcdf : serial read/write of NetCDF files using 'base_node' (netcdf3)
    • 
+
  • PIO_iotype_netcdf4c : parallel read/serial write of NetCDF4 (HDF5) files with data compression
    • 
+
  • PIO_iotype_netcdf4p : parallel read/write of NETCDF4 (HDF5) files 
    • 
+

+
fname: The name of the file to open 
amode_in: The NetCDF creation mode flag. the following flags are available: (1) zero value or NC_NOWRITE is default and opens the file with read-only access. (2) NC_WRITE for read-write access. (3) NC_SHARE is used for NetCDF classic, and dangerous with this application. (4) NC_WRITE|NC_SHARE 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ PIOc_createfile()

+
+

+

+      
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+          
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+      
int PIOc_createfile (int iosysid, 
int * ncidp, 
int * iotype, 
const char * filename, 
int mode 
)

+

+
+
Create a new file using pio. 

+
Input parameters are read on comp task 0 and ignored elsewhere. NOFILL mode will be turned on in all cases.

+
Parameters

+  
+    
+    
+    
+    
+    
+  
iosysidA defined pio system ID, obtained from PIOc_InitIntercomm() or PIOc_InitAsync(). 
ncidpA pointer that gets the ncid of the newly created file. 
iotypeA pointer to a pio output format. Must be one of PIO_IOTYPE_PNETCDF, PIO_IOTYPE_NETCDF, PIO_IOTYPE_NETCDF4C, or PIO_IOTYPE_NETCDF4P. 
filenameThe filename to create. 
modeThe netcdf mode for the create operation. 

+  

+

+
Returns
0 for success, error code otherwise.

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__def__dim.html b/docs/group___p_i_o__def__dim.html
new file mode 100644
index 00000000000..a8c3219e444
--- /dev/null
+++ b/docs/group___p_i_o__def__dim.html
@@ -0,0 +1,331 @@
+
+
+
+
+
+
+
+PIO: PIO_def_dim
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_def_dim
  

+

+

+
+
A set of functions to define dimensions and their attributes in NetCDF files.  
+More...

+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::def_dim_int_desc (File, name, len, dimid)
 Defines the netcdf dimension.  More...
 
integer function pio_nf::def_dim_int_id (ncid, name, len, dimid)
 Defines the netcdf dimension.  More...
 
integer function pio_nf::def_dim_desc (File, name, len, dimid)
 Defines the netcdf dimension.  More...
 
integer function pio_nf::def_dim_id (ncid, name, len, dimid)
 Defines the netcdf dimension.  More...
 
int PIOc_def_dim (int ncid, const char *name, PIO_Offset len, int *idp)
 The PIO-C interface for the NetCDF function nc_def_dim.  More...
 

+
Detailed Description

+
A set of functions to define dimensions and their attributes in NetCDF files. 

+
Function/Subroutine Documentation

+
+
◆ def_dim_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
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+          
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+        
+          
+          
+          
+        
+      
integer function pio_nf::def_dim_desc (type (file_desc_t), intent(in) File, 
character(len=*), intent(in) name, 
integer(pio_offset_kind), intent(in) len, 
integer, intent(out) dimid 
)

+

+
+
Defines the netcdf dimension. 

+
+

+

+
+
◆ def_dim_id()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
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+        
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+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::def_dim_id (integer, intent(in) ncid, 
character(len=*), intent(in) name, 
integer(pio_offset_kind), intent(in) len, 
integer, intent(out) dimid 
)

+

+
+
Defines the netcdf dimension. 

+
+

+

+
+
◆ def_dim_int_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
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+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::def_dim_int_desc (type (file_desc_t), intent(in) File, 
character(len=*), intent(in) name, 
integer, intent(in) len, 
integer, intent(out) dimid 
)

+

+
+
Defines the netcdf dimension. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
name: The name of the dimension to define 
len: The size of the dimension 
dimid: The dimension identifier 

+  

+

+
+

+

+
+
◆ def_dim_int_id()

+
+

+

+      
+        
+          
+          
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+        
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+          
+        
+      
integer function pio_nf::def_dim_int_id (integer, intent(in) ncid, 
character(len=*), intent(in) name, 
integer, intent(in) len, 
integer, intent(out) dimid 
)

+

+
+
Defines the netcdf dimension. 

+
+

+

+
+
◆ PIOc_def_dim()

+
+

+

+      
+        
+          
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+        
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+          
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+        
+        
+          
+          
+          
+        
+      
int PIOc_def_dim (int ncid, 
const char * name, 
PIO_Offset len, 
int * idp 
)

+

+
+
The PIO-C interface for the NetCDF function nc_def_dim. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__dimensions.html

+
Parameters

+  
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
idpa pointer that will get the id of the variable or attribute. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__def__var.html b/docs/group___p_i_o__def__var.html
new file mode 100644
index 00000000000..d9fba1197b0
--- /dev/null
+++ b/docs/group___p_i_o__def__var.html
@@ -0,0 +1,718 @@
+
+
+
+
+
+
+
+PIO: PIO_def_var
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_def_var
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
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+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::def_var_0d_desc (File, name, type, vardesc)
 Defines a netcdf variable.  More...
 

+integer function pio_nf::def_var_0d_id (ncid, name, type, varid)
 Defines a netcdf variable. 
 
integer function pio_nf::def_var_md_desc (File, name, type, dimids, vardesc)
 Defines the a netcdf variable.  More...
 

+integer function pio_nf::def_var_md_id (ncid, name, type, dimids, varid)
 Defines a netcdf variable. 
 
int PIOc_def_var_deflate (int ncid, int varid, int shuffle, int deflate, int deflate_level)
 Set deflate (zlib) settings for a variable.  More...
 
int PIOc_def_var_chunking (int ncid, int varid, int storage, const PIO_Offset *chunksizesp)
 Set chunksizes for a variable.  More...
 
int PIOc_def_var_endian (int ncid, int varid, int endian)
 Set chunksizes for a variable.  More...
 
int PIOc_set_chunk_cache (int iosysid, int iotype, PIO_Offset size, PIO_Offset nelems, float preemption)
 Set chunk cache netCDF files to be opened/created.  More...
 
int PIOc_get_chunk_cache (int iosysid, int iotype, PIO_Offset *sizep, PIO_Offset *nelemsp, float *preemptionp)
 Get current file chunk cache settings from HDF5.  More...
 
int PIOc_set_var_chunk_cache (int ncid, int varid, PIO_Offset size, PIO_Offset nelems, float preemption)
 Set chunksizes for a variable.  More...
 
int PIOc_def_var (int ncid, const char *name, nc_type xtype, int ndims, const int *dimidsp, int *varidp)
 The PIO-C interface for the NetCDF function nc_def_var.  More...
 
int PIOc_def_var_fill (int ncid, int varid, int fill_mode, const void *fill_valuep)
 Set the fill value for a variable.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ def_var_0d_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::def_var_0d_desc (type (file_desc_t), intent(in) File, 
character(len=*), intent(in) name, 
integer, intent(in) type, 
type (var_desc_t), intent(inout) vardesc 
)

+

+
+
Defines a netcdf variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
name: The name of the variable to define 
type: The type of variable 
vardescVariable description structure.

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ def_var_md_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::def_var_md_desc (type (file_desc_t), intent(in) File, 
character(len=*), intent(in) name, 
integer, intent(in) type, 
integer, dimension(:), intent(in) dimids, 
type (var_desc_t), intent(inout) vardesc 
)

+

+
+
Defines the a netcdf variable. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
name: The name of the variable to define 
type: The type of variable 
dimids: The dimension identifier returned by PIO_def_dim 
vardescVariable description structure.

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ PIOc_def_var()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
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+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_def_var (int ncid, 
const char * name, 
nc_type xtype, 
int ndims, 
const int * dimidsp, 
int * varidp 
)

+

+
+
The PIO-C interface for the NetCDF function nc_def_var. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__variables.html

+
Parameters

+  
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
varidpa pointer that will get the variable id 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise.

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_def_var_chunking()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_def_var_chunking (int ncid, 
int varid, 
int storage, 
const PIO_Offset * chunksizesp 
)

+

+
+
Set chunksizes for a variable. 

+
This function only applies to netCDF-4 files. When used with netCDF classic files, the error PIO_ENOTNC4 will be returned.

+
Chunksizes have important performance repercussions. NetCDF attempts to choose sensible chunk sizes by default, but for best performance check chunking against access patterns.

+
See the netCDF variable documentation for details about the operation of this function.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file. 
varidthe ID of the variable to set chunksizes for. 
storageNC_CONTIGUOUS or NC_CHUNKED. 
chunksizepan array of chunksizes. Must have a chunksize for every variable dimension. 

+  

+

+
Returns
PIO_NOERR for success, otherwise an error code. 

+
Author
Ed Hartnett 

+
+

+

+
+
◆ PIOc_def_var_deflate()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_def_var_deflate (int ncid, 
int varid, 
int shuffle, 
int deflate, 
int deflate_level 
)

+

+
+
Set deflate (zlib) settings for a variable. 

+
This function only applies to netCDF-4 files. When used with netCDF classic files, the error PIO_ENOTNC4 will be returned.

+
See the netCDF variable documentation for details about the operation of this function.

+
Parameters

+  
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file. 
varidthe ID of the variable. 
shufflenon-zero to turn on shuffle filter (can be good for integer data). 
deflatenon-zero to turn on zlib compression for this variable. 
deflate_level1 to 9, with 1 being faster and 9 being more compressed. 

+  

+

+
Returns
PIO_NOERR for success, otherwise an error code.

+
Author
Ed Hartnett 

+
+

+

+
+
◆ PIOc_def_var_endian()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_def_var_endian (int ncid, 
int varid, 
int endian 
)

+

+
+
Set chunksizes for a variable. 

+
This function only applies to netCDF-4 files. When used with netCDF classic files, the error PIO_ENOTNC4 will be returned.

+
See the netCDF variable documentation for details about the operation of this function.

+
Chunksizes have important performance repercussions. NetCDF attempts to choose sensible chunk sizes by default, but for best performance check chunking against access patterns.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file. 
varidthe ID of the variable to set chunksizes for. 
storageNC_CONTIGUOUS or NC_CHUNKED. 
chunksizepan array of chunksizes. Must have a chunksize for every variable dimension. 

+  

+

+
Returns
PIO_NOERR for success, otherwise an error code.

+
Author
Ed Hartnett 

+
+

+

+
+
◆ PIOc_def_var_fill()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_def_var_fill (int ncid, 
int varid, 
int fill_mode, 
const void * fill_valuep 
)

+

+
+
Set the fill value for a variable. 

+
See the netCDF variable documentation for details about the operation of this function.

+
When the fill mode for the file is NC_FILL, then fill values are used for missing data. This function sets the fill value to be used for a variable. If no specific fill value is set (as a _FillValue attribute), then the default fill values from netcdf.h are used.

+
NetCDF-4 and pnetcdf files allow setting fill_mode (to NC_FILL or NC_NOFILL) on a per-variable basis. NetCDF classic only allows the fill_mode setting to be set for the whole file. For this function, the fill_mode parameter is ignored for classic files. Set the file-level fill mode with PIOc_set_fill().

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file. 
varidthe ID of the variable to set chunksizes for. 
fill_modefill mode for this variable (NC_FILL or NC_NOFILL) 
fill_valuepointer to the fill value to be used if fill_mode is set to NC_FILL. 

+  

+

+
Returns
PIO_NOERR for success, otherwise an error code.

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_get_chunk_cache()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_get_chunk_cache (int iosysid, 
int iotype, 
PIO_Offset * sizep, 
PIO_Offset * nelemsp, 
float * preemptionp 
)

+

+
+
Get current file chunk cache settings from HDF5. 

+
This function has no effect on netCDF classic files. Calling this function with iotype of PIO_IOTYPE_PNETCDF or PIO_IOTYPE_NETCDF returns an error.

+
The file chunk cache for HDF5 can be set, and will apply for any files opened or created until the program ends, or the settings are changed again. The cache settings apply only to the open file. They do not persist with the file, and must be set each time the file is opened, before it is opened, if they are to have effect.

+
See the netCDF variable documentation for details about the operation of this function.

+
Chunksizes have important performance repercussions. NetCDF attempts to choose sensible chunk sizes by default, but for best performance check chunking against access patterns.

+
Parameters

+  
+    
+    
+    
+    
+  
iotypethe iotype of files to be created or opened. 
sizepgets the size of file cache. 
nelemspgets the number of elements in file cache. 
preemptionpgets the preemption setting for file cache. 

+  

+

+
Returns
PIO_NOERR for success, otherwise an error code.

+
Author
Ed Hartnett 

+
+

+

+
+
◆ PIOc_set_chunk_cache()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_set_chunk_cache (int iosysid, 
int iotype, 
PIO_Offset size, 
PIO_Offset nelems, 
float preemption 
)

+

+
+
Set chunk cache netCDF files to be opened/created. 

+
This function only applies to netCDF-4 files. When used with netCDF classic files, the error PIO_ENOTNC4 will be returned.

+
The file chunk cache for HDF5 can be set, and will apply for any files opened or created until the program ends, or the settings are changed again. The cache settings apply only to the open file. They do not persist with the file, and must be set each time the file is opened, before it is opened, if they are to have effect.

+
See the netCDF variable documentation for details about the operation of this function.

+
Parameters

+  
+    
+    
+    
+    
+  
iotypethe iotype of files to be created or opened. 
sizesize of file cache. 
nelemsnumber of elements in file cache. 
preemptionpreemption setting for file cache. 

+  

+

+
Returns
PIO_NOERR for success, otherwise an error code.

+
Author
Ed Hartnett 

+
+

+

+
+
◆ PIOc_set_var_chunk_cache()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
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+          
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+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_set_var_chunk_cache (int ncid, 
int varid, 
PIO_Offset size, 
PIO_Offset nelems, 
float preemption 
)

+

+
+
Set chunksizes for a variable. 

+
This function only applies to netCDF-4 files. When used with netCDF classic files, the error PIO_ENOTNC4 will be returned.

+
See the netCDF variable documentation for details about the operation of this function.

+
Chunksizes have important performance repercussions. NetCDF attempts to choose sensible chunk sizes by default, but for best performance check chunking against access patterns.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file. 
varidthe ID of the variable to set chunksizes for. 
storageNC_CONTIGUOUS or NC_CHUNKED. 
chunksizepan array of chunksizes. Must have a chunksize for every variable dimension. 

+  

+

+
Returns
PIO_NOERR for success, otherwise an error code.

+
Author
Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__enddef.html b/docs/group___p_i_o__enddef.html
new file mode 100644
index 00000000000..07b01cb8e1a
--- /dev/null
+++ b/docs/group___p_i_o__enddef.html
@@ -0,0 +1,173 @@
+
+
+
+
+
+
+
+PIO: PIO_enddef
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_enddef
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::enddef_desc (File)
 Exits netcdf define mode.  More...
 
integer function pio_nf::enddef_id (ncid)
 Wrapper for the C function PIOc_enddef .  More...
 
int PIOc_enddef (int ncid)
 The PIO-C interface for the NetCDF function nc_enddef.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ enddef_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
integer function pio_nf::enddef_desc (type (file_desc_t), intent(inout) File)

+

+
+
Exits netcdf define mode. 

+
Parameters

+  
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ enddef_id()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
integer function pio_nf::enddef_id (integer, intent(in) ncid)

+

+
+
Wrapper for the C function PIOc_enddef . 

+
+

+

+
+
◆ PIOc_enddef()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
int PIOc_enddef (int ncid)

+

+
+
The PIO-C interface for the NetCDF function nc_enddef. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__datasets.html

+
Parameters

+  
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__error__method.html b/docs/group___p_i_o__error__method.html
new file mode 100644
index 00000000000..dabba2b8e06
--- /dev/null
+++ b/docs/group___p_i_o__error__method.html
@@ -0,0 +1,224 @@
+
+
+
+
+
+
+
+PIO: error_methods
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
error_methods
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
int PIOc_Set_File_Error_Handling (int ncid, int method)
 Set the error handling method to be used for subsequent pio library calls, returns the previous method setting.  More...
 
int PIOc_Set_IOSystem_Error_Handling (int iosysid, int method)
 Set the error handling method used for subsequent calls.  More...
 
int PIOc_set_iosystem_error_handling (int iosysid, int method, int *old_method)
 Set the error handling method used for subsequent calls for this IO system.  More...
 

+
Detailed Description

+
The three types of error handling methods are:
    
+
  • PIO_INTERNAL_ERROR : abort on error from any task
    • 
+
  • PIO_BCAST_ERROR : broadcast an error from io_rank 0 to all tasks in comm
    • 
+
  • PIO_RETURN_ERROR : do nothing - allow the user to handle it
    • 
+

+
Use this instead of ios to set error handling for the library. 

+
Function/Subroutine Documentation

+
+
◆ PIOc_Set_File_Error_Handling()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_Set_File_Error_Handling (int ncid, 
int method 
)

+

+
+
Set the error handling method to be used for subsequent pio library calls, returns the previous method setting. 

+
Note that this changes error handling for the IO system that was used when this file was opened. Other files opened with the same IO system will also he affected by this call. This function is supported but deprecated. New code should use PIOc_set_iosystem_error_handling(). This method has no way to return an error, so any failure will result in MPI_Abort.

+
Parameters

+  
+    
+    
+  
ncidthe ncid of an open file 
methodthe error handling method 

+  

+

+
Returns
old error handler

+
Author
Jim Edwards 

+
+

+

+
+
◆ PIOc_Set_IOSystem_Error_Handling()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_Set_IOSystem_Error_Handling (int iosysid, 
int method 
)

+

+
+
Set the error handling method used for subsequent calls. 

+
This function is deprecated. New code should use PIOc_set_iosystem_error_handling(). This method has no way to return an error, so any failure will result in MPI_Abort.

+
Parameters

+  
+    
+    
+  
iosysidthe IO system ID 
methodthe error handling method 

+  

+

+
Returns
old error handler

+
Author
Jim Edwards 

+
+

+

+
+
◆ PIOc_set_iosystem_error_handling()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_set_iosystem_error_handling (int iosysid, 
int method, 
int * old_method 
)

+

+
+
Set the error handling method used for subsequent calls for this IO system. 

+
Parameters

+  
+    
+    
+    
+  
iosysidthe IO system ID. Passing PIO_DEFAULT instead changes the default error handling for the library. 
methodthe error handling method 
old_methodpointer to int that will get old method. Ignored if NULL. 

+  

+

+
Returns
0 for success, error code otherwise.

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__finalize.html b/docs/group___p_i_o__finalize.html
new file mode 100644
index 00000000000..3a17907e107
--- /dev/null
+++ b/docs/group___p_i_o__finalize.html
@@ -0,0 +1,163 @@
+
+
+
+
+
+
+
+PIO: PIO_finalize
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_finalize
  

+

+

+
+
Shuts down and cleans up any memory associated with the pio library.  
+More...

+
+
+
+
+
+
+
+
+

+Functions/Subroutines
subroutine piolib_mod::finalize (iosystem, ierr)
 finalizes the pio subsystem.  More...
 
int PIOc_finalize (int iosysid)
 Clean up internal data structures, free MPI resources, and exit the pio library.  More...
 

+
Detailed Description

+
Shuts down and cleans up any memory associated with the pio library. 

+
Function/Subroutine Documentation

+
+
◆ finalize()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piolib_mod::finalize (type (iosystem_desc_t), intent(inout) iosystem, 
integer(i4), intent(out) ierr 
)

+

+
+
finalizes the pio subsystem. 

+
This is a collective call which expects the following parameters 
Parameters

+  
+    
+  
iosystem: IO descriptor structure. This structure defines the mapping for a given variable between compute and IO decomposition. 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ PIOc_finalize()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
int PIOc_finalize (int iosysid)

+

+
+
Clean up internal data structures, free MPI resources, and exit the pio library. 

+
Parameters

+  
+    
+  
iosysidthe io system ID provided by PIOc_Init_Intracomm(). 

+  

+

+
Returns
0 for success or non-zero for error.

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__freedecomp.html b/docs/group___p_i_o__freedecomp.html
new file mode 100644
index 00000000000..4ee7e251f2f
--- /dev/null
+++ b/docs/group___p_i_o__freedecomp.html
@@ -0,0 +1,173 @@
+
+
+
+
+
+
+
+PIO: PIO_freedecomp
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_freedecomp
  

+

+

+
+
free memory associated with a io descriptor  
+More...

+
+
+
+
+
+
+
+
+

+Functions/Subroutines
subroutine piolib_mod::freedecomp_ios (ios, iodesc)
 free all allocated storage associated with this decomposition  More...
 
subroutine piolib_mod::freedecomp_file (file, iodesc)
 free all allocated storage associated with this decomposition  More...
 

+
Detailed Description

+
free memory associated with a io descriptor 

+
Function/Subroutine Documentation

+
+
◆ freedecomp_file()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piolib_mod::freedecomp_file (type (file_desc_t) file, 
type (io_desc_t) iodesc 
)

+

+
+
free all allocated storage associated with this decomposition 

+
Parameters

+  
+    
+    
+  
fileFile descriptor structure. This structure holds information associated with each open file 
iodesc: IO descriptor structure. This structure defines the mapping for a given variable between compute and IO decomposition. 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ freedecomp_ios()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piolib_mod::freedecomp_ios (type (iosystem_desc_t) ios, 
type (io_desc_t) iodesc 
)

+

+
+
free all allocated storage associated with this decomposition 

+
Parameters

+  
+    
+    
+  
ios: a defined pio system descriptor created by call to PIO_init (see PIO_types) 
iodescIO descriptor structure. This structure defines the mapping for a given variable between compute and IO decomposition. 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__get__att.html b/docs/group___p_i_o__get__att.html
new file mode 100644
index 00000000000..2d90e7ae796
--- /dev/null
+++ b/docs/group___p_i_o__get__att.html
@@ -0,0 +1,1189 @@
+
+
+
+
+
+
+
+PIO: PIO_get_att
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_get_att
  

+

+

+
+
Reads an netcdf attribute from a file.  
+More...

+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pionfatt_mod::get_att_desc_text (File, varDesc, name, values)
 Reads an netcdf attribute from a file.  More...
 
integer function pionfatt_mod::get_att_desc_1d_int (File, varDesc, name, values)
 Reads an netcdf attribute from a file.  More...
 
integer function pionfatt_mod::get_att_id_int (ncid, varid, name, values)
 Reads an netcdf attribute from a file.  More...
 
integer function pionfatt_mod::get_att_1d_real (File, varid, name, values)
 Reads an netcdf attribute from a file.  More...
 
integer function pionfatt_mod::get_att_1d_int (File, varid, name, values)
 Reads an netcdf attribute from a file.  More...
 
integer function pionfatt_mod::get_att_1d_double (File, varid, name, values)
 Reads an netcdf attribute from a file.  More...
 
int PIOc_get_att (int ncid, int varid, const char *name, void *ip)
 Get the value of an attribute of any type, with no type conversion.  More...
 
int PIOc_get_att_double (int ncid, int varid, const char *name, double *ip)
 Get the value of an 64-bit floating point array attribute.  More...
 
int PIOc_get_att_uchar (int ncid, int varid, const char *name, unsigned char *ip)
 Get the value of an 8-bit unsigned char array attribute.  More...
 
int PIOc_get_att_ushort (int ncid, int varid, const char *name, unsigned short *ip)
 Get the value of an 16-bit unsigned integer array attribute.  More...
 
int PIOc_get_att_uint (int ncid, int varid, const char *name, unsigned int *ip)
 Get the value of an 32-bit unsigned integer array attribute.  More...
 
int PIOc_get_att_long (int ncid, int varid, const char *name, long *ip)
 Get the value of an 32-bit ingeger array attribute.  More...
 
int PIOc_get_att_text (int ncid, int varid, const char *name, char *ip)
 Get the value of an text attribute.  More...
 
int PIOc_get_att_schar (int ncid, int varid, const char *name, signed char *ip)
 Get the value of an 8-bit signed char array attribute.  More...
 
int PIOc_get_att_ulonglong (int ncid, int varid, const char *name, unsigned long long *ip)
 Get the value of an 64-bit unsigned integer array attribute.  More...
 
int PIOc_get_att_short (int ncid, int varid, const char *name, short *ip)
 Get the value of an 16-bit integer array attribute.  More...
 
int PIOc_get_att_int (int ncid, int varid, const char *name, int *ip)
 Get the value of an 32-bit integer array attribute.  More...
 
int PIOc_get_att_longlong (int ncid, int varid, const char *name, long long *ip)
 Get the value of an 64-bit integer array attribute.  More...
 
int PIOc_get_att_float (int ncid, int varid, const char *name, float *ip)
 Get the value of an 32-bit floating point array attribute.  More...
 

+
Detailed Description

+
Reads an netcdf attribute from a file. 

+
Function/Subroutine Documentation

+
+
◆ get_att_1d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfatt_mod::get_att_1d_double (type (file_desc_t), intent(in), target File, 
integer(i4), intent(in) varid, 
character(len=*), intent(in) name, 
real(r8), dimension(:), intent(out) values 
)

+

+
+
Reads an netcdf attribute from a file. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
name: name of the attribute to get 
values: The value for the netcdf attribute 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ get_att_1d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfatt_mod::get_att_1d_int (type (file_desc_t), intent(in), target File, 
integer(i4), intent(in) varid, 
character(len=*), intent(in) name, 
integer(i4), dimension(:), intent(out) values 
)

+

+
+
Reads an netcdf attribute from a file. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
name: name of the attribute to get 
values: The value for the netcdf attribute 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ get_att_1d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfatt_mod::get_att_1d_real (type (file_desc_t), intent(in), target File, 
integer(i4), intent(in) varid, 
character(len=*), intent(in) name, 
real(r4), dimension(:), intent(out) values 
)

+

+
+
Reads an netcdf attribute from a file. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
name: name of the attribute to get 
values: The value for the netcdf attribute 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ get_att_desc_1d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfatt_mod::get_att_desc_1d_int (type (file_desc_t), intent(inout), target File, 
type (var_desc_t), intent(in) varDesc, 
character(len=*), intent(in) name, 
integer(i4), dimension(:), intent(out) values 
)

+

+
+
Reads an netcdf attribute from a file. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varDescVariable description structure.
name: name of the attribute to get 
values: The value for the netcdf attribute 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ get_att_desc_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfatt_mod::get_att_desc_text (type (file_desc_t), intent(inout), target File, 
type (var_desc_t), intent(in) varDesc, 
character(len=*), intent(in) name, 
character(len=*), intent(out) values 
)

+

+
+
Reads an netcdf attribute from a file. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varDescVariable description structure.
name: name of the attribute to get 
values: The value for the netcdf attribute 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ get_att_id_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfatt_mod::get_att_id_int (integer, intent(in) ncid, 
integer, intent(in) varid, 
character(len=*), intent(in) name, 
integer(i4), intent(out), target values 
)

+

+
+
Reads an netcdf attribute from a file. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
name: name of the attribute to get 
values: The value for the netcdf attribute 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ PIOc_get_att()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_get_att (int ncid, 
int varid, 
const char * name, 
void * ip 
)

+

+
+
Get the value of an attribute of any type, with no type conversion. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute to get 
ipa pointer that will get the attribute value. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise.

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_get_att_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_get_att_double (int ncid, 
int varid, 
const char * name, 
double * ip 
)

+

+
+
Get the value of an 64-bit floating point array attribute. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute to get 
ipa pointer that will get the attribute value. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_get_att_float()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_get_att_float (int ncid, 
int varid, 
const char * name, 
float * ip 
)

+

+
+
Get the value of an 32-bit floating point array attribute. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute to get 
ipa pointer that will get the attribute value. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_get_att_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_get_att_int (int ncid, 
int varid, 
const char * name, 
int * ip 
)

+

+
+
Get the value of an 32-bit integer array attribute. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute to get 
ipa pointer that will get the attribute value. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_get_att_long()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_get_att_long (int ncid, 
int varid, 
const char * name, 
long * ip 
)

+

+
+
Get the value of an 32-bit ingeger array attribute. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute to get 
ipa pointer that will get the attribute value. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_get_att_longlong()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_get_att_longlong (int ncid, 
int varid, 
const char * name, 
long long * ip 
)

+

+
+
Get the value of an 64-bit integer array attribute. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute to get 
ipa pointer that will get the attribute value. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_get_att_schar()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_get_att_schar (int ncid, 
int varid, 
const char * name, 
signed char * ip 
)

+

+
+
Get the value of an 8-bit signed char array attribute. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute to get 
ipa pointer that will get the attribute value. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_get_att_short()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_get_att_short (int ncid, 
int varid, 
const char * name, 
short * ip 
)

+

+
+
Get the value of an 16-bit integer array attribute. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute to get 
ipa pointer that will get the attribute value. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_get_att_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_get_att_text (int ncid, 
int varid, 
const char * name, 
char * ip 
)

+

+
+
Get the value of an text attribute. 

+
There is no type conversion with this call. If the attribute is not of type NC_CHAR, then an error will be returned.

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute to get 
ipa pointer that will get the attribute value. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise.

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_get_att_uchar()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_get_att_uchar (int ncid, 
int varid, 
const char * name, 
unsigned char * ip 
)

+

+
+
Get the value of an 8-bit unsigned char array attribute. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute to get 
ipa pointer that will get the attribute value. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_get_att_uint()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_get_att_uint (int ncid, 
int varid, 
const char * name, 
unsigned int * ip 
)

+

+
+
Get the value of an 32-bit unsigned integer array attribute. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute to get 
ipa pointer that will get the attribute value. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise.

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_get_att_ulonglong()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_get_att_ulonglong (int ncid, 
int varid, 
const char * name, 
unsigned long long * ip 
)

+

+
+
Get the value of an 64-bit unsigned integer array attribute. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute to get 
ipa pointer that will get the attribute value. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_get_att_ushort()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_get_att_ushort (int ncid, 
int varid, 
const char * name, 
unsigned short * ip 
)

+

+
+
Get the value of an 16-bit unsigned integer array attribute. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute to get 
ipa pointer that will get the attribute value. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__get__local__array__size.html b/docs/group___p_i_o__get__local__array__size.html
new file mode 100644
index 00000000000..4e83c44a012
--- /dev/null
+++ b/docs/group___p_i_o__get__local__array__size.html
@@ -0,0 +1,112 @@
+
+
+
+
+
+
+
+PIO: PIO_get_local_array_size
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_get_local_array_size
  

+

+

+
+
+
+
+
+

+Functions/Subroutines
integer function, public piolib_mod::pio_get_local_array_size (iodesc)
 This function returns the expected local size of an array associated with iodesc.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ pio_get_local_array_size()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
integer function, public piolib_mod::pio_get_local_array_size (type(io_desc_t), intent(in) iodesc)

+

+
+
This function returns the expected local size of an array associated with iodesc. 

+
Parameters

+  
+    
+  
iodescIO descriptor structure. This structure defines the mapping for a given variable between compute and IO decomposition. 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__get__var.html b/docs/group___p_i_o__get__var.html
new file mode 100644
index 00000000000..c5bb6aba9b3
--- /dev/null
+++ b/docs/group___p_i_o__get__var.html
@@ -0,0 +1,2659 @@
+
+
+
+
+
+
+
+PIO: PIO_get_var
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
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+  

+Functions/Subroutines  

+  

+
PIO_get_var
  

+

+

+
+
Reads non-decomposed data from a NetCDF file.  
+More...

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+Functions/Subroutines
integer function pionfget_mod::get_var1_text (File, varid, index, ival)
 Reads non-decomposed fields from a NetCDF file.  More...
 
integer function pionfget_mod::get_var1_vdesc_text (File, vardesc, index, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_1d_int (File, varid, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_2d_int (File, varid, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_3d_int (File, varid, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_4d_int (File, varid, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_5d_int (File, varid, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_1d_real (File, varid, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_2d_real (File, varid, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_3d_real (File, varid, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_4d_real (File, varid, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_5d_real (File, varid, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_1d_double (File, varid, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_2d_double (File, varid, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_3d_double (File, varid, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_4d_double (File, varid, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_5d_double (File, varid, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_1d_text (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_2d_text (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_3d_text (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_4d_text (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_5d_text (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_1d_real (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_2d_real (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_3d_real (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_4d_real (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_5d_real (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_1d_double (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_2d_double (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_3d_double (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_4d_double (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_5d_double (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_1d_int (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_2d_int (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_3d_int (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_4d_int (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_vara_vdesc_5d_int (File, vardesc, start, count, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_var_0d_text (File, varid, ival)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfget_mod::get_var_vdesc_0d_text (File, vardesc, ival)
 Writes an netcdf attribute to a file.  More...
 

+
Detailed Description

+
Reads non-decomposed data from a NetCDF file. 

+
The get_var interface is provided as a simplified interface to read variables from a NetCDF format file. The variable is read on the root IO task and broadcast in its entirety to all tasks. 

+
Function/Subroutine Documentation

+
+
◆ get_var1_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_var1_text (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) index, 
character(len=*), intent(out) ival 
)

+

+
+
Reads non-decomposed fields from a NetCDF file. 

+
Parameters

+  
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
index: a multidimensional index that specifies which value to get 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_var1_vdesc_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_var1_vdesc_text (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) index, 
character(len=*), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
index: a multidimensional index that specifies which value to get 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_var_0d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_var_0d_text (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
character(len=*), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_var_vdesc_0d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_var_vdesc_0d_text (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
character(len=*), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_1d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_1d_double (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_1d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_1d_int (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_1d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_1d_real (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_2d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_2d_double (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_2d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_2d_int (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_2d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_2d_real (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_3d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_3d_double (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_3d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_3d_int (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_3d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_3d_real (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_4d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_4d_double (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_4d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_4d_int (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_4d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_4d_real (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_5d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_5d_double (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:,:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_5d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_5d_int (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:,:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_5d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_5d_real (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:,:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varid: The netcdf variable identifier 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_1d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_1d_double (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_1d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_1d_int (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_1d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_1d_real (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_1d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_1d_text (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
character(len=*), dimension(:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_2d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
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+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_2d_double (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_2d_int()

+
+

+

+      
+        
+          
+          
+          
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+        
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+          
+          
+          
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+        
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+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_2d_int (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_2d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
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+        
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+        
+        
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+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_2d_real (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_2d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
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+        
+        
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+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_2d_text (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
character(len=*), dimension(:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_3d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
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+        
+        
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+          
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+        
+        
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+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_3d_double (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_3d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
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+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_3d_int (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_3d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_3d_real (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_3d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_3d_text (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
character(len=*), dimension(:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_4d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_4d_double (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_4d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_4d_int (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_4d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_4d_real (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_4d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_4d_text (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
character(len=*), dimension(:,:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_5d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
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+          
+          
+        
+        
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+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_5d_double (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:,:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_5d_int()

+
+

+

+      
+        
+          
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+          
+        
+        
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+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_5d_int (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:,:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_5d_real()

+
+

+

+      
+        
+          
+          
+          
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+          
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+        
+        
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+          
+          
+        
+      
integer function pionfget_mod::get_vara_vdesc_5d_real (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:,:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+
+
◆ get_vara_vdesc_5d_text()

+
+

+

+      
+        
+          
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+        
+      
integer function pionfget_mod::get_vara_vdesc_5d_text (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
character(len=*), dimension(:,:,:,:,:), intent(out) ival 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
vardescvar_desc_t 
start: A vector of size_t integers specifying the index in the variable where the first of the data values will be read. The indices are relative to 0, so for example, the first data value of a variable would have index (0, 0, ... , 0). The length of start must be the same as the number of dimensions of the specified variable. The elements of start correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first index would correspond to the starting record number for reading the data values. 
count: A vector of size_t integers specifying the edge lengths along each dimension of the block of data values to be read. To read a single value, for example, specify count as (1, 1, ... , 1). The length of count is the number of dimensions of the specified variable. The elements of count correspond, in order, to the variable's dimensions. Hence, if the variable is a record variable, the first element of count corresponds to a count of the number of records to read. Note: setting any element of the count array to zero causes the function to exit without error, and without doing anything. 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierrerror return codes 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__getnumiotasks.html b/docs/group___p_i_o__getnumiotasks.html
new file mode 100644
index 00000000000..a1b3fef50d2
--- /dev/null
+++ b/docs/group___p_i_o__getnumiotasks.html
@@ -0,0 +1,128 @@
+
+
+
+
+
+
+
+PIO: PIO_getnumiotasks
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_getnumiotasks
  

+

+

+
+
returns the actual number of IO-tasks used.  
+More...

+
+
+
+
+
+

+Functions/Subroutines
subroutine piolib_mod::getnumiotasks (iosystem, numiotasks)
 This returns the number of IO-tasks that PIO is using.  More...
 

+
Detailed Description

+
returns the actual number of IO-tasks used. 

+
PIO will reset the total number of IO-tasks if certain conditions are meet 

+
Function/Subroutine Documentation

+
+
◆ getnumiotasks()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
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+          
+        
+      
subroutine piolib_mod::getnumiotasks (type (iosystem_desc_t), intent(in) iosystem, 
integer(i4), intent(out) numiotasks 
)

+

+
+
This returns the number of IO-tasks that PIO is using. 

+
Parameters

+  
+    
+    
+  
iosystem: a defined pio system descriptor, see PIO_types 
numiotasks: the number of IO-tasks 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__init.html b/docs/group___p_i_o__init.html
new file mode 100644
index 00000000000..c1417860389
--- /dev/null
+++ b/docs/group___p_i_o__init.html
@@ -0,0 +1,450 @@
+
+
+
+
+
+
+
+PIO: PIO_init
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_init
  

+

+

+
+
initializes the pio subsystem  
+More...

+
+
+
+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
subroutine piolib_mod::init_intracom (comp_rank, comp_comm, num_iotasks, num_aggregator, stride, rearr, iosystem, base, rearr_opts)
 initialize the pio subsystem.  More...
 
subroutine piolib_mod::init_intercom (component_count, peer_comm, comp_comms, io_comm, iosystem)
 Initialize the pio subsystem.  More...
 
int PIOc_Init_Intracomm (MPI_Comm comp_comm, int num_iotasks, int stride, int base, int rearr, int *iosysidp)
 Library initialization used when IO tasks are a subset of compute tasks.  More...
 
int PIOc_init_async (MPI_Comm world, int num_io_procs, int *io_proc_list, int component_count, int *num_procs_per_comp, int **proc_list, MPI_Comm *user_io_comm, MPI_Comm *user_comp_comm, int rearranger, int *iosysidp)
 Library initialization used when IO tasks are distinct from compute tasks.  More...
 

+
Detailed Description

+
initializes the pio subsystem 

+
Function/Subroutine Documentation

+
+
◆ init_intercom()

+
+

+

+      
+        
+          
+          
+          
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+        
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+          
+          
+        
+      
subroutine piolib_mod::init_intercom (integer, intent(in) component_count, 
integer, intent(in) peer_comm, 
integer, dimension(component_count), intent(in) comp_comms, 
integer, intent(in) io_comm, 
type (iosystem_desc_t), dimension(component_count), intent(out) iosystem 
)

+

+
+
Initialize the pio subsystem. 

+
This is a collective call. Input parameters are read on comp_rank=0 values on other tasks are ignored. This variation of PIO_init sets up a distinct set of tasks to handle IO, these tasks do not return from this call. Instead they go to an internal loop and wait to receive further instructions from the computational tasks 
Parameters

+  
+    
+    
+    
+    
+    
+  
component_countThe number of computational components to associate with this IO component 
peer_commThe communicator from which all other communicator arguments are derived 
comp_commsThe computational communicator for each of the computational components 
io_commThe io communicator 
iosystema derived type which can be used in subsequent pio operations (defined in PIO_types). 

+  

+

+
+

+

+
+
◆ init_intracom()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
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+        
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+          
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+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piolib_mod::init_intracom (integer(i4), intent(in) comp_rank, 
integer(i4), intent(in) comp_comm, 
integer(i4), intent(in) num_iotasks, 
integer(i4), intent(in) num_aggregator, 
integer(i4), intent(in) stride, 
integer(i4), intent(in) rearr, 
type (iosystem_desc_t), intent(out) iosystem, 
integer(i4), intent(in), optional base, 
type (pio_rearr_opt_t), intent(in), optional rearr_opts 
)

+

+
+
initialize the pio subsystem. 

+
This is a collective call. Input parameters are read on comp_rank=0 values on other tasks are ignored. This variation of PIO_init locates the IO tasks on a subset of the compute tasks. 
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
comp_rankmpi rank of each participating task, 
comp_commthe mpi communicator which defines the collective. 
num_iotasksthe number of iotasks to define. 
num_aggregatorthe mpi aggregator count 
stridethe stride in the mpi rank between io tasks. 
rearrThe three choices to control rearrangement are:
    
+
  • PIO_rearr_none : Do not use any form of rearrangement
    • 
+
  • PIO_rearr_box : Use a PIO internal box rearrangement
    • 
+

+

+  

+

+
    
+
  • PIO_rearr_subset : Use a PIO internal subsetting rearrangement 
    Parameters
    
+  
+    
+    
+  
    iosystema derived type which can be used in subsequent pio operations (defined in PIO_types). 
    baseoptional argument can be used to offset the first io task - default base is task 1. 
    
+  
    
+
    
+
    • 
+

+
+

+

+
+
◆ PIOc_init_async()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
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+          
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+        
+        
+          
+          
+          
+          
+        
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+          
+          
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+          
+        
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+        
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+        
+        
+          
+          
+          
+        
+      
int PIOc_init_async (MPI_Comm world, 
int num_io_procs, 
int * io_proc_list, 
int component_count, 
int * num_procs_per_comp, 
int ** proc_list, 
MPI_Comm * user_io_comm, 
MPI_Comm * user_comp_comm, 
int rearranger, 
int * iosysidp 
)

+

+
+
Library initialization used when IO tasks are distinct from compute tasks. 

+
This is a collective call. Input parameters are read on comp_rank=0 values on other tasks are ignored. This variation of PIO_init sets up a distinct set of tasks to handle IO, these tasks do not return from this call. Instead they go to an internal loop and wait to receive further instructions from the computational tasks.

+
Sequence of Events to do Asynch I/O 

+
Here is the sequence of events that needs to occur when an IO operation is called from the collection of compute tasks. I'm going to use pio_put_var because write_darray has some special characteristics that make it a bit more complicated...

+
Compute tasks call pio_put_var with an integer argument

+
The MPI_Send sends a message from comp_rank=0 to io_rank=0 on union_comm (a comm defined as the union of io and compute tasks) msg is an integer which indicates the function being called, in this case the msg is PIO_MSG_PUT_VAR_INT

+
The iotasks now know what additional arguments they should expect to receive from the compute tasks, in this case a file handle, a variable id, the length of the array and the array itself.

+
The iotasks now have the information they need to complete the operation and they call the pio_put_var routine. (In pio1 this bit of code is in pio_get_put_callbacks.F90.in)

+
After the netcdf operation is completed (in the case of an inq or get operation) the result is communicated back to the compute tasks.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+  
worldthe communicator containing all the available tasks.
num_io_procsthe number of processes for the IO component.
io_proc_listan array of lenth num_io_procs with the processor number for each IO processor. If NULL then the IO processes are assigned starting at processes 0.
component_countnumber of computational components
num_procs_per_compan array of int, of length component_count, with the number of processors in each computation component.
proc_listan array of arrays containing the processor numbers for each computation component. If NULL then the computation components are assigned processors sequentially starting with processor num_io_procs.
user_io_commpointer to an MPI_Comm. If not NULL, it will get an MPI duplicate of the IO communicator. (It is a full duplicate and later must be freed with MPI_Free() by the caller.)
user_comp_commpointer to an array of pointers to MPI_Comm; the array is of length component_count. If not NULL, it will get an MPI duplicate of each computation communicator. (These are full duplicates and each must later be freed with MPI_Free() by the caller.)
rearrangerthe default rearranger to use for decompositions in this IO system. Only PIO_REARR_BOX is supported for async. Support for PIO_REARR_SUBSET will be provided in a future version.
iosysidppointer to array of length component_count that gets the iosysid for each component.

+  

+

+
Returns
PIO_NOERR on success, error code otherwise.

+
Author
Ed Hartnett 

+
+

+

+
+
◆ PIOc_Init_Intracomm()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
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+          
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+        
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+          
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+          
+        
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+          
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+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_Init_Intracomm (MPI_Comm comp_comm, 
int num_iotasks, 
int stride, 
int base, 
int rearr, 
int * iosysidp 
)

+

+
+
Library initialization used when IO tasks are a subset of compute tasks. 

+
This function creates an MPI intracommunicator between a set of IO tasks and one or more sets of computational tasks.

+
The caller must create all comp_comm and the io_comm MPI communicators before calling this function.

+
Internally, this function does the following:

+
    
+
  • 
+Initialize logging system (if PIO_ENABLE_LOGGING is set). 
    • 
+
  • 
+Allocates and initializes the iosystem_desc_t struct (ios). 
    • 
+
  • 
+MPI duplicated user comp_comm to ios->comp_comm and ios->union_comm. 
    • 
+
  • 
+Set ios->my_comm to be ios->comp_comm. (Not an MPI duplication.) 
    • 
+
  • 
+Find MPI rank in comp_comm, determine ranks of IO tasks, determine whether this task is one of the IO tasks. 
    • 
+
  • 
+Identify the root IO tasks. 
    • 
+
  • 
+Create MPI groups for IO tasks, and for computation tasks. 
    • 
+
  • 
+On IO tasks, create an IO communicator (ios->io_comm). 
    • 
+
  • 
+Assign an iosystemid, and put this iosystem_desc_t into the list of open iosystems. 
    • 
+
  • 
+Initialize the bget buffer, unless PIO_USE_MALLOC was used. 
    • 
+

+
When complete, there are three MPI communicators (ios->comp_comm, ios->union_comm, and ios->io_comm) that must be freed by MPI.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
comp_commthe MPI_Comm of the compute tasks. 
num_iotasksthe number of io tasks to use. 
stridethe offset between io tasks in the comp_comm. 
basethe comp_comm index of the first io task. 
rearrthe rearranger to use by default, this may be overriden in the PIO_init_decomp(). The rearranger is not used until the decomposition is initialized. 
iosysidpindex of the defined system descriptor. 

+  

+

+
Returns
0 on success, otherwise a PIO error code.

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__initdecomp.html b/docs/group___p_i_o__initdecomp.html
new file mode 100644
index 00000000000..8c10432e7b9
--- /dev/null
+++ b/docs/group___p_i_o__initdecomp.html
@@ -0,0 +1,905 @@
+
+
+
+
+
+
+
+PIO: PIO_initdecomp
+
+
+
+
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+  
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+

+   
PIO
+    2.4.0
+   

+  

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+
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+
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+  

+Functions/Subroutines  

+  

+
PIO_initdecomp
  

+

+

+
+
PIO_initdecomp is an overload interface the models decomposition to pio.  
+More...

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+Functions/Subroutines
subroutine piolib_mod::pio_initdecomp_bc (iosystem, basepiotype, dims, compstart, compcount, iodesc)
 Implements the decomp_bc for PIO_initdecomp.  More...
 
subroutine piolib_mod::initdecomp_2dof_bin_i4 (iosystem, basepiotype, dims, lenblocks, compdof, iodofr, iodofw, iodesc)
 A deprecated interface to the PIO_initdecomp method.  More...
 
subroutine piolib_mod::initdecomp_1dof_bin_i8 (iosystem, basepiotype, dims, lenblocks, compdof, iodofr, iodesc)
 A deprecated interface to the PIO_initdecomp method.  More...
 
subroutine piolib_mod::initdecomp_2dof_nf_i4 (iosystem, basepiotype, dims, lenblocks, compdof, iodofr, iodofw, start, count, iodesc)
 A deprecated interface to the PIO_initdecomp method.  More...
 
subroutine piolib_mod::initdecomp_1dof_nf_i4 (iosystem, basepiotype, dims, lenblocks, compdof, iodof, start, count, iodesc)
 A deprecated interface to the PIO_initdecomp method.  More...
 
subroutine piolib_mod::pio_initdecomp_dof_i4 (iosystem, basepiotype, dims, compdof, iodesc, rearr, iostart, iocount)
 Implements the decomp_dof for PIO_initdecomp (previous name: initdecomp_1dof_nf_box)  More...
 
int PIOc_InitDecomp (int iosysid, int pio_type, int ndims, const int *gdimlen, int maplen, const PIO_Offset *compmap, int *ioidp, const int *rearranger, const PIO_Offset *iostart, const PIO_Offset *iocount)
 Initialize the decomposition used with distributed arrays.  More...
 
int PIOc_init_decomp (int iosysid, int pio_type, int ndims, const int *gdimlen, int maplen, const PIO_Offset *compmap, int *ioidp, int rearranger, const PIO_Offset *iostart, const PIO_Offset *iocount)
 Initialize the decomposition used with distributed arrays.  More...
 
int PIOc_InitDecomp_bc (int iosysid, int pio_type, int ndims, const int *gdimlen, const long int *start, const long int *count, int *ioidp)
 This is a simplified initdecomp which can be used if the memory order of the data can be expressed in terms of start and count on the file.  More...
 

+
Detailed Description

+
PIO_initdecomp is an overload interface the models decomposition to pio. 

+
initdecomp_1dof_bin_i8, initdecomp_1dof_nf_i4, initdecomp_2dof_bin_i4, and initdecomp_2dof_nf_i4 are all depreciated, but supported for backwards compatibility. 

+
Function/Subroutine Documentation

+
+
◆ initdecomp_1dof_bin_i8()

+
+

+

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subroutine piolib_mod::initdecomp_1dof_bin_i8 (type (iosystem_desc_t), intent(in) iosystem, 
integer(i4), intent(in) basepiotype, 
integer(i4), dimension(:), intent(in) dims, 
integer(i4), intent(in) lenblocks, 
integer(pio_offset_kind), dimension(:), intent(in) compdof, 
integer(pio_offset_kind), dimension(:), intent(in) iodofr, 
type (io_desc_t), intent(inout) iodesc 
)

+

+
+
A deprecated interface to the PIO_initdecomp method. 

+
Deprecated:

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+    
+  
iosystem: a defined pio system descriptor, see PIO_types 
basepiotype: the type of variable(s) associated with this iodesc. The base types supported by PIO are:
    
+
  • PIO_double : 8-byte reals or double precision
    • 
+
  • PIO_real : 4-byte reals
    • 
+
  • PIO_int : 4-byte integers
    • 
+
  • PIO_char : character 
    • 
+

+
dims: an array of the global length of each dimesion of the variable(s) 
lenblocks: 
compdof: mapping of the storage order of the variable to its memory order 
iodofr: 
iodescThe io descriptor structure in defined in this subroutine and subsequently used in PIO_read_darray, PIO_write_darray, PIO_put_var, PIO_get_var calls (see pio_types).

+  

+

+
+

+

+
+
◆ initdecomp_1dof_nf_i4()

+
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subroutine piolib_mod::initdecomp_1dof_nf_i4 (type (iosystem_desc_t), intent(in) iosystem, 
integer(i4), intent(in) basepiotype, 
integer(i4), dimension(:), intent(in) dims, 
integer (i4), intent(in) lenblocks, 
integer (i4), dimension(:), intent(in) compdof, 
integer (i4), dimension(:), intent(in) iodof, 
integer(pio_offset_kind), dimension(:), intent(in) start, 
integer(pio_offset_kind), dimension(:), intent(in) count, 
type (io_desc_t), intent(inout) iodesc 
)

+

+
+
A deprecated interface to the PIO_initdecomp method. 

+
Deprecated:

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+    
+    
+    
+  
iosystem: a defined PIO system descriptor, see pio_types 
basepiotype: The type of variable(s) associated with this iodesc. The base types supported by PIO are:
    
+
  • PIO_double : 8-byte reals or double precision
    • 
+
  • PIO_real : 4-byte reals
    • 
+
  • PIO_int : 4-byte integers
    • 
+
  • PIO_char : character 
    • 
+

+
dims: an array of the global length of each dimesion of the variable(s) 
lenblocks: 
compdof: mapping of the storage order of the variable to its memory order 
iodof: 
start: 
count: 
iodescThe io descriptor structure in defined in this subroutine and subsequently used in PIO_read_darray, PIO_write_darray, PIO_put_var, PIO_get_var calls (see pio_types).

+  

+

+
+

+

+
+
◆ initdecomp_2dof_bin_i4()

+
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subroutine piolib_mod::initdecomp_2dof_bin_i4 (type (iosystem_desc_t), intent(in) iosystem, 
integer(i4), intent(in) basepiotype, 
integer(i4), dimension(:), intent(in) dims, 
integer (i4), intent(in) lenblocks, 
integer (i4), dimension(:), intent(in) compdof, 
integer (i4), dimension(:), intent(in) iodofr, 
integer (i4), dimension(:), intent(in) iodofw, 
type (io_desc_t), intent(inout) iodesc 
)

+

+
+
A deprecated interface to the PIO_initdecomp method. 

+
Deprecated:

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+    
+    
+  
iosystem: a defined pio system descriptor, see PIO_types 
basepiotype: the type of variable(s) associated with this iodesc. The base types supported by PIO are:
    
+
  • PIO_double : 8-byte reals or double precision
    • 
+
  • PIO_real : 4-byte reals
    • 
+
  • PIO_int : 4-byte integers
    • 
+
  • PIO_char : character 
    • 
+

+
dims: an array of the global length of each dimesion of the variable(s) 
lenblocks: 
compdof: mapping of the storage order of the variable to its memory order 
iodofr: 
iodofw: 
iodescThe io descriptor structure in defined in this subroutine and subsequently used in PIO_read_darray, PIO_write_darray, PIO_put_var, PIO_get_var calls (see pio_types).

+  

+

+
+

+

+
+
◆ initdecomp_2dof_nf_i4()

+
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+

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subroutine piolib_mod::initdecomp_2dof_nf_i4 (type (iosystem_desc_t), intent(in) iosystem, 
integer(i4), intent(in) basepiotype, 
integer(i4), dimension(:), intent(in) dims, 
integer (i4), intent(in) lenblocks, 
integer (i4), dimension(:), intent(in) compdof, 
integer (i4), dimension(:), intent(in) iodofr, 
integer (i4), dimension(:), intent(in) iodofw, 
integer(pio_offset_kind), dimension(:), intent(in) start, 
integer(pio_offset_kind), dimension(:), intent(in) count, 
type (io_desc_t), intent(inout) iodesc 
)

+

+
+
A deprecated interface to the PIO_initdecomp method. 

+
Deprecated:

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+  
iosystem: a defined pio system descriptor, see PIO_types 
basepiotype: the type of variable(s) associated with this iodesc. The base types supported by PIO are:
    
+
  • PIO_double : 8-byte reals or double precision
    • 
+
  • PIO_real : 4-byte reals
    • 
+
  • PIO_int : 4-byte integers
    • 
+
  • PIO_char : character 
    • 
+

+
dims: an array of the global length of each dimesion of the variable(s) 
lenblocks: 
compdof: mapping of the storage order of the variable to its memory order 
iodofr: 
iodofw: 
start: used with count to give a block description of the shape of the data 
count: 
iodescThe io descriptor structure in defined in this subroutine and subsequently used in PIO_read_darray, PIO_write_darray, PIO_put_var, PIO_get_var calls (see pio_types).

+  

+

+
+

+

+
+
◆ pio_initdecomp_bc()

+
+

+

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subroutine piolib_mod::pio_initdecomp_bc (type (iosystem_desc_t), intent(inout) iosystem, 
integer(i4), intent(in) basepiotype, 
integer(i4), dimension(:), intent(in) dims, 
integer (kind=pio_offset_kind), dimension(:) compstart, 
integer (kind=pio_offset_kind), dimension(:) compcount, 
type (io_desc_t), intent(out) iodesc 
)

+

+
+
Implements the decomp_bc for PIO_initdecomp. 

+
This provides the ability to describe a computational decomposition in PIO that has a block-cyclic form. That is something that can be described using start and count arrays. Optional parameters for this subroutine allows for the specification of io decomposition using iostart and iocount arrays. If iostart and iocount arrays are not specified by the user, and rearrangement is turned on then PIO will calculate a suitable IO decomposition 
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
iosystemIO system descriptor structure. This structure contains the general IO subsystem data and MPI structure 
basepiotypeThe type of variable(s) associated with this iodesc. The base types supported by PIO are:
    
+
  • PIO_double : 8-byte reals or double precision
    • 
+
  • PIO_real : 4-byte reals
    • 
+
  • PIO_int : 4-byte integers
    • 
+
  • PIO_char : character 
    • 
+

+
dimsAn array of the global length of each dimesion of the variable(s) 
compstartThe start index into the block-cyclic computational decomposition 
compcountThe count for the block-cyclic computational decomposition 
iodescThe io descriptor structure in defined in this subroutine and subsequently used in PIO_read_darray, PIO_write_darray, PIO_put_var, PIO_get_var calls (see pio_types).

+  

+

+
+

+

+
+
◆ pio_initdecomp_dof_i4()

+
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+

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subroutine piolib_mod::pio_initdecomp_dof_i4 (type (iosystem_desc_t), intent(inout) iosystem, 
integer(i4), intent(in) basepiotype, 
integer(i4), dimension(:), intent(in) dims, 
integer(i4), dimension(:), intent(in) compdof, 
type (io_desc_t), intent(inout) iodesc, 
integer, optional, target rearr, 
integer (pio_offset_kind), dimension(:), optional iostart, 
integer (pio_offset_kind), dimension(:), optional iocount 
)

+

+
+
Implements the decomp_dof for PIO_initdecomp (previous name: initdecomp_1dof_nf_box) 

+
This provides the ability to describe a computational decomposition in PIO using degrees of freedom method. This is a decomposition that can not be easily described using a start and count method (see decomp_dof). Optional parameters for this subroutine allows for the specififcation of io decomposition using iostart and iocount arrays. If iostart and iocount arrays are not specified by the user, and rearrangement is turned on then PIO will calculate an suitable IO decomposition. Note that this subroutine was previously called initdecomp_1dof_nf_box 
Parameters

+  
+    
+    
+    
+    
+    
+    
+    
+  
iosystemIO system descriptor structure. This structure contains the general IO subsystem data and MPI structure 
basepiotypeThe type of variable(s) associated with this iodesc. The base types supported by PIO are:
    
+
  • PIO_double : 8-byte reals or double precision
    • 
+
  • PIO_real : 4-byte reals
    • 
+
  • PIO_int : 4-byte integers
    • 
+
  • PIO_char : character 
    • 
+

+
dimsAn array of the global length of each dimesion of the variable(s) 
compdofMapping of the storage order for the computational decomposition to its memory order 
iodescThe io descriptor structure in defined in this subroutine and subsequently used in PIO_read_darray, PIO_write_darray, PIO_put_var, PIO_get_var calls (see pio_types).
iostartThe start index for the block-cyclic io decomposition 
iocountThe count for the block-cyclic io decomposition 

+  

+

+
+

+

+
+
◆ PIOc_init_decomp()

+
+

+

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int PIOc_init_decomp (int iosysid, 
int pio_type, 
int ndims, 
const int * gdimlen, 
int maplen, 
const PIO_Offset * compmap, 
int * ioidp, 
int rearranger, 
const PIO_Offset * iostart, 
const PIO_Offset * iocount 
)

+

+
+
Initialize the decomposition used with distributed arrays. 

+
The decomposition describes how the data will be distributed between tasks.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+  
iosysidthe IO system ID. 
pio_typethe basic PIO data type used. 
ndimsthe number of dimensions in the variable, not including the unlimited dimension. 
gdimlenan array length ndims with the sizes of the global dimensions. 
maplenthe local length of the compmap array. 
compmapa 0 based array of offsets into the array record on file. A -1 in this array indicates a value which should not be transfered. 
ioidppointer that will get the io description ID. 
rearrangerthe rearranger to be used for this decomp or 0 to use the default. Valid rearrangers are PIO_REARR_BOX and PIO_REARR_SUBSET. 
iostartAn array of start values for block cyclic decompositions. If NULL ??? 
iocountAn array of count values for block cyclic decompositions. If NULL ??? 

+  

+

+
Returns
0 on success, error code otherwise

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_InitDecomp()

+
+

+

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int PIOc_InitDecomp (int iosysid, 
int pio_type, 
int ndims, 
const int * gdimlen, 
int maplen, 
const PIO_Offset * compmap, 
int * ioidp, 
const int * rearranger, 
const PIO_Offset * iostart, 
const PIO_Offset * iocount 
)

+

+
+
Initialize the decomposition used with distributed arrays. 

+
The decomposition describes how the data will be distributed between tasks.

+
Internally, this function will: 
    
+
  • 
+Allocate and initialize an iodesc struct for this decomposition. (This also allocates an io_region struct for the first region.) 
    • 
+
  • 
+(Box rearranger only) If iostart or iocount are NULL, call CalcStartandCount() to determine starts/counts. Then call compute_maxIObuffersize() to compute the max IO buffer size needed. 
    • 
+
  • 
+Create the rearranger. 
    • 
+
  • 
+Assign an ioid and add this decomposition to the list of open decompositions. 
    • 
+

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+  
iosysidthe IO system ID. 
pio_typethe basic PIO data type used. 
ndimsthe number of dimensions in the variable, not including the unlimited dimension. 
gdimlenan array length ndims with the sizes of the global dimensions. 
maplenthe local length of the compmap array. 
compmapa 1 based array of offsets into the array record on file. A 0 in this array indicates a value which should not be transfered. 
ioidppointer that will get the io description ID. Ignored if NULL. 
rearrangerpointer to the rearranger to be used for this decomp or NULL to use the default. 
iostartAn array of start values for block cyclic decompositions for the SUBSET rearranger. Ignored if block rearranger is used. If NULL and SUBSET rearranger is used, the iostarts are generated. 
iocountAn array of count values for block cyclic decompositions for the SUBSET rearranger. Ignored if block rearranger is used. If NULL and SUBSET rearranger is used, the iostarts are generated. 

+  

+

+
Returns
0 on success, error code otherwise

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_InitDecomp_bc()

+
+

+

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int PIOc_InitDecomp_bc (int iosysid, 
int pio_type, 
int ndims, 
const int * gdimlen, 
const long int * start, 
const long int * count, 
int * ioidp 
)

+

+
+
This is a simplified initdecomp which can be used if the memory order of the data can be expressed in terms of start and count on the file. 

+
In this case we compute the compdof.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+    
+  
iosysidthe IO system ID 
pio_type
ndimsthe number of dimensions 
gdimlenan array length ndims with the sizes of the global dimensions. 
startstart array 
countcount array 
pointerthat gets the IO ID. 

+  

+

+
Returns
0 for success, error code otherwise

+
Author
Jim Edwards 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__att.html b/docs/group___p_i_o__inq__att.html
new file mode 100644
index 00000000000..d2b29698bcb
--- /dev/null
+++ b/docs/group___p_i_o__inq__att.html
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+PIO: PIO_inq_att
+
+
+
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+

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+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

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+  

+Functions/Subroutines  

+  

+
PIO_inq_att
  

+

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+Functions/Subroutines
integer function pio_nf::inq_att_desc (File, vardesc, name, xtype, len)
 Gets information about attributes.  More...
 

+integer function pio_nf::inq_att_vid (File, varid, name, xtype, len)
 Gets information about attributes. 
 

+integer function pio_nf::inq_att_id (ncid, varid, name, xtype, len)
 Gets information about attributes. 
 
int PIOc_inq_att_eh (int ncid, int varid, const char *name, int eh, nc_type *xtypep, PIO_Offset *lenp)
 The PIO-C interface for the NetCDF function nc_inq_att.  More...
 
int PIOc_inq_att (int ncid, int varid, const char *name, nc_type *xtypep, PIO_Offset *lenp)
 The PIO-C interface for the NetCDF function nc_inq_att.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inq_att_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
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+          
+          
+        
+      
integer function pio_nf::inq_att_desc (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
character(len=*), intent(in) name, 
integer, intent(out), optional xtype, 
integer(pio_offset_kind), intent(out), optional len 
)

+

+
+
Gets information about attributes. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
name: Name of the attribute 
xtype: The type of attribute 
len: The length of the attribute 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ PIOc_inq_att()

+
+

+

+      
+        
+          
+          
+          
+          
+        
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+          
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+        
+          
+          
+          
+        
+      
int PIOc_inq_att (int ncid, 
int varid, 
const char * name, 
nc_type * xtypep, 
PIO_Offset * lenp 
)

+

+
+
The PIO-C interface for the NetCDF function nc_inq_att. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__attributes.html

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
varidthe variable ID or NC_GLOBAL. 
namename of the attribute. 
xtypepa pointer that will get the type of the attribute. 
lenpa pointer that will get the number of values 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_inq_att_eh()

+
+

+

+      
+        
+          
+          
+          
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+        
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+        
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+          
+          
+        
+      
int PIOc_inq_att_eh (int ncid, 
int varid, 
const char * name, 
int eh, 
nc_type * xtypep, 
PIO_Offset * lenp 
)

+

+
+
The PIO-C interface for the NetCDF function nc_inq_att. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__attributes.html

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID or NC_GLOBAL. 
namename of the attribute. 
ehnon-zero to handle errors in the function. This will cause program to halt if PIO error handler is set to INTERNAL. 
xtypepa pointer that will get the type of the attribute. 
lenpa pointer that will get the number of values 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__attlen.html b/docs/group___p_i_o__inq__attlen.html
new file mode 100644
index 00000000000..a9af77cbf26
--- /dev/null
+++ b/docs/group___p_i_o__inq__attlen.html
@@ -0,0 +1,207 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_attlen
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

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+Functions/Subroutines  

+  

+
PIO_inq_attlen
  

+

+

+
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+
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+
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+
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+
+

+Functions/Subroutines
integer function pio_nf::inq_attlen_desc (File, vardesc, name, len)
 Gets the attribute length.  More...
 

+integer function pio_nf::inq_attlen_vid (File, varid, name, len)
 Gets the attribute length. 
 

+integer function pio_nf::inq_attlen_id (ncid, varid, name, len)
 Gets the attribute length. 
 
int PIOc_inq_attlen (int ncid, int varid, const char *name, PIO_Offset *lenp)
 Get the length of an attribute.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inq_attlen_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
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+        
+          
+          
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+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_attlen_desc (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(in) vardesc, 
character(len=*), intent(in) name, 
integer(kind=pio_offset_kind), intent(out) len 
)

+

+
+
Gets the attribute length. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
name: name of attribute 
len: Length of attribute 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ PIOc_inq_attlen()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
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+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_inq_attlen (int ncid, 
int varid, 
const char * name, 
PIO_Offset * lenp 
)

+

+
+
Get the length of an attribute. 

+
Parameters

+  
+    
+    
+    
+    
+  
ncidthe ID of an open file. 
varidthe variable ID, or NC_GLOBAL for global attributes. 
namethe name of the attribute. 
lenpa pointer that gets the lenght of the attribute array. Ignored if NULL. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__attname.html b/docs/group___p_i_o__inq__attname.html
new file mode 100644
index 00000000000..e6709de5574
--- /dev/null
+++ b/docs/group___p_i_o__inq__attname.html
@@ -0,0 +1,151 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_attname
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

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PIO_inq_attname
  

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+Functions/Subroutines

+integer function pio_nf::inq_attname_desc (File, vdesc, attnum, name)
 Gets the name of an attribute. 
 

+integer function pio_nf::inq_attname_vid (File, varid, attnum, name)
 Gets the name of an attribute. 
 

+integer function pio_nf::inq_attname_id (ncid, varid, attnum, name)
 Gets the name of an attribute. 
 
int PIOc_inq_attname (int ncid, int varid, int attnum, char *name)
 The PIO-C interface for the NetCDF function nc_inq_attname.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ PIOc_inq_attname()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_inq_attname (int ncid, 
int varid, 
int attnum, 
char * name 
)

+

+
+
The PIO-C interface for the NetCDF function nc_inq_attname. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__attributes.html

+
Parameters

+  
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
attnumthe attribute ID. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. See PIOc_Set_File_Error_Handling 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__dimid.html b/docs/group___p_i_o__inq__dimid.html
new file mode 100644
index 00000000000..57ae234193b
--- /dev/null
+++ b/docs/group___p_i_o__inq__dimid.html
@@ -0,0 +1,225 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_dimid
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
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+

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+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inq_dimid
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::inq_dimid_desc (File, name, dimid)
 Returns the netcdf dimension id for the name.  More...
 
integer function pio_nf::inq_dimid_id (ncid, name, dimid)
 Returns the netcdf dimension id for the name.  More...
 
int PIOc_inq_dimid (int ncid, const char *name, int *idp)
 The PIO-C interface for the NetCDF function nc_inq_dimid.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inq_dimid_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_dimid_desc (type (file_desc_t), intent(in) File, 
character(len=*), intent(in) name, 
integer, intent(out) dimid 
)

+

+
+
Returns the netcdf dimension id for the name. 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
name: The name of the netcdf dimension. 
dimid: The netcdf dimension id. 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling )

+  

+

+
Note that we do not want internal error checking for this function. 

+
+

+

+
+
◆ inq_dimid_id()

+
+

+

+      
+        
+          
+          
+          
+          
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+          
+          
+        
+        
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+          
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+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_dimid_id (integer, intent(in) ncid, 
character(len=*), intent(in) name, 
integer, intent(out) dimid 
)

+

+
+
Returns the netcdf dimension id for the name. 

+
+

+

+
+
◆ PIOc_inq_dimid()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
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+        
+          
+          
+          
+        
+      
int PIOc_inq_dimid (int ncid, 
const char * name, 
int * idp 
)

+

+
+
The PIO-C interface for the NetCDF function nc_inq_dimid. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__dimensions.html

+
Parameters

+  
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
idpa pointer that will get the id of the variable or attribute. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. See PIOc_Set_File_Error_Handling 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__dimlen.html b/docs/group___p_i_o__inq__dimlen.html
new file mode 100644
index 00000000000..cccd9f26a7c
--- /dev/null
+++ b/docs/group___p_i_o__inq__dimlen.html
@@ -0,0 +1,197 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_dimlen
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
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+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inq_dimlen
  

+

+

+
+
+
+
+
+
+
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+
+
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+
+
+

+Functions/Subroutines
integer function pio_nf::inq_dimlen_desc (File, dimid, len)
 Get information about the length of a particular dimension in netcdf file.  More...
 

+integer function pio_nf::inq_dimlen_desc_long (File, dimid, len)
 Get information about the length of a particular dimension in netcdf file. 
 

+integer function pio_nf::inq_dimlen_id (ncid, dimid, len)
 Get information about the length of a particular dimension in netcdf file. 
 

+integer function pio_nf::inq_dimlen_id_long (ncid, dimid, len)
 Get information about the length of a particular dimension in netcdf file. 
 
int PIOc_inq_dimlen (int ncid, int dimid, PIO_Offset *lenp)
 Find the length of a dimension.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inq_dimlen_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_dimlen_desc (type(file_desc_t), intent(in) File, 
integer, intent(in) dimid, 
integer, intent(out) len 
)

+

+
+
Get information about the length of a particular dimension in netcdf file. 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
dimid: The netcdf dimension ID. 
len: The length of the dimesion. 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ PIOc_inq_dimlen()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_inq_dimlen (int ncid, 
int dimid, 
PIO_Offset * lenp 
)

+

+
+
Find the length of a dimension. 

+
Parameters

+  
+    
+    
+    
+  
ncidthe ncid of an open file. 
dimidthe dimension ID. 
lenpa pointer that gets the length of the dimension. Igorned if NULL. 

+  

+

+
Returns
0 for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__dimname.html b/docs/group___p_i_o__inq__dimname.html
new file mode 100644
index 00000000000..912c68bae43
--- /dev/null
+++ b/docs/group___p_i_o__inq__dimname.html
@@ -0,0 +1,224 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_dimname
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inq_dimname
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::inq_dimname_desc (File, dimid, name)
 Get information about the name of of a dimension.  More...
 
integer function pio_nf::inq_dimname_id (ncid, dimid, name)
 Get information about the name of of a dimension.  More...
 
int PIOc_inq_dimname (int ncid, int dimid, char *name)
 Find the name of a dimension.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inq_dimname_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_dimname_desc (type(file_desc_t), intent(in) File, 
integer, intent(in) dimid, 
character(len=*), intent(out) name 
)

+

+
+
Get information about the name of of a dimension. 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
dimid: The netcdf dimension ID. 
len: The length of the dimesion. 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ inq_dimname_id()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_dimname_id (integer, intent(in) ncid, 
integer, intent(in) dimid, 
character(len=*), intent(out) name 
)

+

+
+
Get information about the name of of a dimension. 

+
+

+

+
+
◆ PIOc_inq_dimname()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_inq_dimname (int ncid, 
int dimid, 
char * name 
)

+

+
+
Find the name of a dimension. 

+
Parameters

+  
+    
+    
+    
+  
ncidthe ncid of an open file. 
dimidthe dimension ID. 
namea pointer that gets the name of the dimension. Igorned if NULL. 

+  

+

+
Returns
0 for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__natts.html b/docs/group___p_i_o__inq__natts.html
new file mode 100644
index 00000000000..274ee6fe7d8
--- /dev/null
+++ b/docs/group___p_i_o__inq__natts.html
@@ -0,0 +1,204 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_natts
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inq_natts
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::inq_natts_desc (File, natts)
 Get information about the number of global attributes in a file or group.  More...
 
integer function pio_nf::inq_natts_id (ncid, natts)
 Get information about the number of global attributes in a file or group.  More...
 
int PIOc_inq_natts (int ncid, int *ngattsp)
 Find out how many global attributes are defined in a file.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inq_natts_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_natts_desc (type (file_desc_t), intent(inout) File, 
integer, intent(out) natts 
)

+

+
+
Get information about the number of global attributes in a file or group. 

+
Parameters

+  
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
natts: The number of attributes in the file. 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ inq_natts_id()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_natts_id (integer, intent(in) ncid, 
integer, intent(out) natts 
)

+

+
+
Get information about the number of global attributes in a file or group. 

+
+

+

+
+
◆ PIOc_inq_natts()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_inq_natts (int ncid, 
int * ngattsp 
)

+

+
+
Find out how many global attributes are defined in a file. 

+
Parameters

+  
+    
+    
+  
ncidthe ncid of the open file. 
nattspa pointer that will get the number of attributes. 

+  

+

+
Returns
0 for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__ndims.html b/docs/group___p_i_o__inq__ndims.html
new file mode 100644
index 00000000000..0215fb7c632
--- /dev/null
+++ b/docs/group___p_i_o__inq__ndims.html
@@ -0,0 +1,204 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_ndims
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inq_ndims
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::inq_ndims_desc (File, ndims)
 Get information about the number of dimensions of a file or group.  More...
 
integer function pio_nf::inq_ndims_id (ncid, ndims)
 Get information about the number of dimensions of a file or group.  More...
 
int PIOc_inq_ndims (int ncid, int *ndimsp)
 Find out how many dimensions are defined in the file.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inq_ndims_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_ndims_desc (type (file_desc_t), intent(inout) File, 
integer, intent(out) ndims 
)

+

+
+
Get information about the number of dimensions of a file or group. 

+
Parameters

+  
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
ndims: The number of dimensions in the file. 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ inq_ndims_id()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_ndims_id (integer, intent(in) ncid, 
integer, intent(out) ndims 
)

+

+
+
Get information about the number of dimensions of a file or group. 

+
+

+

+
+
◆ PIOc_inq_ndims()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_inq_ndims (int ncid, 
int * ndimsp 
)

+

+
+
Find out how many dimensions are defined in the file. 

+
Parameters

+  
+    
+    
+  
ncidthe ncid of the open file. 
ndimspa pointer that will get the number of dimensions. 

+  

+

+
Returns
0 for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__nvars.html b/docs/group___p_i_o__inq__nvars.html
new file mode 100644
index 00000000000..00f0f748ec1
--- /dev/null
+++ b/docs/group___p_i_o__inq__nvars.html
@@ -0,0 +1,204 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_nvars
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inq_nvars
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::inq_nvars_desc (File, nvars)
 Get information about the number of variables in a file or group.  More...
 
integer function pio_nf::inq_nvars_id (ncid, nvars)
 Get information about the number of variables in a file or group.  More...
 
int PIOc_inq_nvars (int ncid, int *nvarsp)
 Find out how many variables are defined in a file.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inq_nvars_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_nvars_desc (type (file_desc_t), intent(inout) File, 
integer, intent(out) nvars 
)

+

+
+
Get information about the number of variables in a file or group. 

+
Parameters

+  
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
nvars: The number of variables in the file. 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ inq_nvars_id()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_nvars_id (integer, intent(in) ncid, 
integer, intent(out) nvars 
)

+

+
+
Get information about the number of variables in a file or group. 

+
+

+

+
+
◆ PIOc_inq_nvars()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_inq_nvars (int ncid, 
int * nvarsp 
)

+

+
+
Find out how many variables are defined in a file. 

+
Parameters

+  
+    
+    
+  
ncidthe ncid of the open file. 
nvarspa pointer that will get the number of variables. 

+  

+

+
Returns
0 for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__unlimdim.html b/docs/group___p_i_o__inq__unlimdim.html
new file mode 100644
index 00000000000..22e0b3ba868
--- /dev/null
+++ b/docs/group___p_i_o__inq__unlimdim.html
@@ -0,0 +1,175 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_unlimdim
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inq_unlimdim
  

+

+

+
+
+
+
+
+
+
+
+

+Functions/Subroutines
int PIOc_inq_unlimdim (int ncid, int *unlimdimidp)
 Find out the dimension ids of the unlimited dimension.  More...
 
int PIOc_inq_unlimdims (int ncid, int *nunlimdimsp, int *unlimdimidsp)
 Find out the dimension ids of all unlimited dimensions.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ PIOc_inq_unlimdim()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_inq_unlimdim (int ncid, 
int * unlimdimidp 
)

+

+
+
Find out the dimension ids of the unlimited dimension. 

+
Parameters

+  
+    
+    
+  
ncidthe ncid of the open file. 
unlimdimidpa pointer that will the ID of the unlimited dimension, or -1 if there is no unlimited dimension. 

+  

+

+
Returns
0 for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_inq_unlimdims()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_inq_unlimdims (int ncid, 
int * nunlimdimsp, 
int * unlimdimidsp 
)

+

+
+
Find out the dimension ids of all unlimited dimensions. 

+
Note that only netCDF-4 files can have more than 1 unlimited dimension.

+
Parameters

+  
+    
+    
+    
+  
ncidthe ncid of the open file. 
nunlimdimspa pointer that gets the number of unlimited dimensions. Ignored if NULL. 
unlimdimidspa pointer that will get an array of unlimited dimension IDs. 

+  

+

+
Returns
0 for success, error code otherwise.

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__var__deflate.html b/docs/group___p_i_o__inq__var__deflate.html
new file mode 100644
index 00000000000..4eb83d9e5b6
--- /dev/null
+++ b/docs/group___p_i_o__inq__var__deflate.html
@@ -0,0 +1,250 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_var_deflate
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inq_var_deflate
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::inq_var_deflate_desc (File, vardesc, shuffle, deflate, deflate_level)
 Gets metadata information for netcdf file.  More...
 
integer function pio_nf::inq_var_deflate_vid (File, varid, shuffle, deflate, deflate_level)
 Gets metadata information for netcdf file.  More...
 
integer function pio_nf::inq_var_deflate_id (ncid, varid, shuffle, deflate, deflate_level)
 Gets metadata information for netcdf file.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inq_var_deflate_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_var_deflate_desc (type (file_desc_t), intent(in) File, 
type (var_desc_t), intent(in) vardesc, 
integer, intent(out) shuffle, 
integer, intent(out) deflate, 
integer, intent(out) deflate_level 
)

+

+
+
Gets metadata information for netcdf file. 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
type: The type of variable 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ inq_var_deflate_id()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_var_deflate_id (integer, intent(in) ncid, 
integer, intent(in) varid, 
integer, intent(out) shuffle, 
integer, intent(out) deflate, 
integer, intent(out) deflate_level 
)

+

+
+
Gets metadata information for netcdf file. 

+
+

+

+
+
◆ inq_var_deflate_vid()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_var_deflate_vid (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, intent(out) shuffle, 
integer, intent(out) deflate, 
integer, intent(out) deflate_level 
)

+

+
+
Gets metadata information for netcdf file. 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__vardimid.html b/docs/group___p_i_o__inq__vardimid.html
new file mode 100644
index 00000000000..15a3d87ecdf
--- /dev/null
+++ b/docs/group___p_i_o__inq__vardimid.html
@@ -0,0 +1,193 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_vardimid
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inq_vardimid
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::inq_vardimid_desc (File, vardesc, dimids)
 returns the dimids of the variable as an interger array  More...
 

+integer function pio_nf::inq_vardimid_vid (File, varid, dimids)
 returns the dimids of the variable as an interger array 
 

+integer function pio_nf::inq_vardimid_id (ncid, varid, dimids)
 returns the dimids of the variable as an interger array 
 
int PIOc_inq_vardimid (int ncid, int varid, int *dimidsp)
 Find the dimension IDs associated with a variable.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inq_vardimid_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_vardimid_desc (type (file_desc_t), intent(in) File, 
type (var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(out) dimids 
)

+

+
+
returns the dimids of the variable as an interger array 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
dimids: The dimension identifier returned by PIO_def_dim 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ PIOc_inq_vardimid()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_inq_vardimid (int ncid, 
int varid, 
int * dimidsp 
)

+

+
+
Find the dimension IDs associated with a variable. 

+
Parameters

+  
+    
+    
+    
+  
ncidthe ncid of the open file. 
varidthe variable ID. 
dimidspa pointer that will get an array of dimids. Ignored if NULL. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__varid.html b/docs/group___p_i_o__inq__varid.html
new file mode 100644
index 00000000000..4959f08873d
--- /dev/null
+++ b/docs/group___p_i_o__inq__varid.html
@@ -0,0 +1,194 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_varid
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inq_varid
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::inq_varid_desc (File, name, vardesc)
 Returns the ID of a netcdf variable given its name.  More...
 

+integer function pio_nf::inq_varid_vid (File, name, varid)
 Returns the ID of a netcdf variable given its name. 
 

+integer function pio_nf::inq_varid_id (ncid, name, varid)
 Returns the ID of a netcdf variable given its name. 
 
int PIOc_inq_varid (int ncid, const char *name, int *varidp)
 The PIO-C interface for the NetCDF function nc_inq_varid.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inq_varid_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_varid_desc (type (file_desc_t), intent(in) File, 
character(len=*), intent(in) name, 
type (var_desc_t), intent(inout) vardesc 
)

+

+
+
Returns the ID of a netcdf variable given its name. 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
name: Name of the returned attribute 
vardescVariable description structure.

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ PIOc_inq_varid()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_inq_varid (int ncid, 
const char * name, 
int * varidp 
)

+

+
+
The PIO-C interface for the NetCDF function nc_inq_varid. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__variables.html

+
Parameters

+  
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
varidpa pointer that will get the variable id 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. See PIOc_Set_File_Error_Handling 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__varname.html b/docs/group___p_i_o__inq__varname.html
new file mode 100644
index 00000000000..3f425ae5acc
--- /dev/null
+++ b/docs/group___p_i_o__inq__varname.html
@@ -0,0 +1,193 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_varname
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inq_varname
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::inq_varname_desc (File, vardesc, name)
 Get the name associated with a variable.  More...
 

+integer function pio_nf::inq_varname_vid (File, varid, name)
 Get the name associated with a variable. 
 

+integer function pio_nf::inq_varname_id (ncid, varid, name)
 Get the name associated with a variable. 
 
int PIOc_inq_varname (int ncid, int varid, char *name)
 Get the name of a variable.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inq_varname_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_varname_desc (type (file_desc_t), intent(in) File, 
type (var_desc_t), intent(in) vardesc, 
character(len=*), intent(out) name 
)

+

+
+
Get the name associated with a variable. 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
name: The name of the netcdf variable. 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ PIOc_inq_varname()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_inq_varname (int ncid, 
int varid, 
char * name 
)

+

+
+
Get the name of a variable. 

+
Parameters

+  
+    
+    
+    
+  
ncidthe ncid of the open file. 
varidthe variable ID. 
namea pointer that will get the variable name. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__varnatts.html b/docs/group___p_i_o__inq__varnatts.html
new file mode 100644
index 00000000000..40d69728e2e
--- /dev/null
+++ b/docs/group___p_i_o__inq__varnatts.html
@@ -0,0 +1,263 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_varnatts
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inq_varnatts
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::inq_varnatts_desc (File, vardesc, natts)
 Gets metadata information for netcdf file.  More...
 
integer function pio_nf::inq_varnatts_vid (File, varid, natts)
 Gets metadata information for netcdf file.  More...
 
integer function pio_nf::inq_varnatts_id (ncid, varid, natts)
 Gets metadata information for netcdf file.  More...
 
int PIOc_inq_varnatts (int ncid, int varid, int *nattsp)
 Find the number of attributes associated with a variable.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inq_varnatts_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_varnatts_desc (type (file_desc_t), intent(in) File, 
type (var_desc_t), intent(in) vardesc, 
integer, intent(out) natts 
)

+

+
+
Gets metadata information for netcdf file. 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
type: The type of variable 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ inq_varnatts_id()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_varnatts_id (integer, intent(in) ncid, 
integer, intent(in) varid, 
integer, intent(out) natts 
)

+

+
+
Gets metadata information for netcdf file. 

+
+

+

+
+
◆ inq_varnatts_vid()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_varnatts_vid (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, intent(out) natts 
)

+

+
+
Gets metadata information for netcdf file. 

+
+

+

+
+
◆ PIOc_inq_varnatts()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_inq_varnatts (int ncid, 
int varid, 
int * nattsp 
)

+

+
+
Find the number of attributes associated with a variable. 

+
Parameters

+  
+    
+    
+    
+  
ncidthe ncid of the open file. 
varidthe variable ID. 
nattspa pointer that will get the number of attriburtes. Ignored if NULL. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__varndims.html b/docs/group___p_i_o__inq__varndims.html
new file mode 100644
index 00000000000..e72a2f09be0
--- /dev/null
+++ b/docs/group___p_i_o__inq__varndims.html
@@ -0,0 +1,193 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_varndims
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inq_varndims
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::inq_varndims_desc (File, vardesc, ndims)
 Gets the number of dimension associated with a netcdf variable.  More...
 

+integer function pio_nf::inq_varndims_vid (File, varid, ndims)
 Gets the number of dimension associated with a netcdf variable. 
 

+integer function pio_nf::inq_varndims_id (ncid, varid, ndims)
 Gets the number of dimension associated with a netcdf variable. 
 
int PIOc_inq_varndims (int ncid, int varid, int *ndimsp)
 Find the number of dimensions of a variable.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inq_varndims_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_varndims_desc (type (file_desc_t), intent(in) File, 
type (var_desc_t), intent(in) vardesc, 
integer, intent(out) ndims 
)

+

+
+
Gets the number of dimension associated with a netcdf variable. 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ndims: The number of dimensions for the variable 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ PIOc_inq_varndims()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_inq_varndims (int ncid, 
int varid, 
int * ndimsp 
)

+

+
+
Find the number of dimensions of a variable. 

+
Parameters

+  
+    
+    
+    
+  
ncidthe ncid of the open file. 
varidthe variable ID. 
ndimspa pointer that will get the number of dimensions. Ignored if NULL. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inq__vartype.html b/docs/group___p_i_o__inq__vartype.html
new file mode 100644
index 00000000000..9e9e0de0f29
--- /dev/null
+++ b/docs/group___p_i_o__inq__vartype.html
@@ -0,0 +1,263 @@
+
+
+
+
+
+
+
+PIO: PIO_inq_vartype
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inq_vartype
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::inq_vartype_desc (File, vardesc, type)
 Gets metadata information for netcdf file.  More...
 
integer function pio_nf::inq_vartype_vid (File, varid, type)
 Gets metadata information for netcdf file.  More...
 
integer function pio_nf::inq_vartype_id (ncid, varid, type)
 Gets metadata information for netcdf file.  More...
 
int PIOc_inq_vartype (int ncid, int varid, nc_type *xtypep)
 Find the type of a variable.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inq_vartype_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_vartype_desc (type (file_desc_t), intent(in) File, 
type (var_desc_t), intent(in) vardesc, 
integer, intent(out) type 
)

+

+
+
Gets metadata information for netcdf file. 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
type: The type of variable 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ inq_vartype_id()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_vartype_id (integer, intent(in) ncid, 
integer, intent(in) varid, 
integer, intent(out) type 
)

+

+
+
Gets metadata information for netcdf file. 

+
+

+

+
+
◆ inq_vartype_vid()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inq_vartype_vid (type (file_desc_t), intent(in) File, 
integer, intent(in) varid, 
integer, intent(out) type 
)

+

+
+
Gets metadata information for netcdf file. 

+
+

+

+
+
◆ PIOc_inq_vartype()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
int PIOc_inq_vartype (int ncid, 
int varid, 
nc_type * xtypep 
)

+

+
+
Find the type of a variable. 

+
Parameters

+  
+    
+    
+    
+  
ncidthe ncid of the open file. 
varidthe variable ID. 
xtypepa pointer that will get the type of the attribute. Ignored if NULL. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inquire.html b/docs/group___p_i_o__inquire.html
new file mode 100644
index 00000000000..abbd49390e4
--- /dev/null
+++ b/docs/group___p_i_o__inquire.html
@@ -0,0 +1,201 @@
+
+
+
+
+
+
+
+PIO: PIO_inquire
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inquire
  

+

+

+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::inquire_desc (File, nDimensions, nVariables, nAttributes, unlimitedDimID)
 Gets metadata information for netcdf file.  More...
 
integer function pio_nf::inquire_id (ncid, nDimensions, nVariables, nAttributes, unlimitedDimID)
 Gets metadata information for netcdf file.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inquire_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
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+          
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+        
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+          
+          
+        
+      
integer function pio_nf::inquire_desc (type (file_desc_t), intent(in) File, 
integer, intent(out), optional nDimensions, 
integer, intent(out), optional nVariables, 
integer, intent(out), optional nAttributes, 
integer, intent(out), optional unlimitedDimID 
)

+

+
+
Gets metadata information for netcdf file. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
nDimensions: Number of dimensions defined for the netcdf file 
nVariables: Number of variables defined for the netcdf file 
nAttributes: Number of attributes defined for the netcdf file 
unlimitedDimID: the Unlimited dimension ID 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ inquire_id()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
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+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inquire_id (integer, intent(in) ncid, 
integer, intent(out), optional nDimensions, 
integer, intent(out), optional nVariables, 
integer, intent(out), optional nAttributes, 
integer, intent(out), optional unlimitedDimID 
)

+

+
+
Gets metadata information for netcdf file. 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inquire__dimension.html b/docs/group___p_i_o__inquire__dimension.html
new file mode 100644
index 00000000000..b22a6bbe58d
--- /dev/null
+++ b/docs/group___p_i_o__inquire__dimension.html
@@ -0,0 +1,147 @@
+
+
+
+
+
+
+
+PIO: PIO_inquire_dimension
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inquire_dimension
  

+

+

+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::inquire_dimension_desc (file, dimid, name, len)
 Get information about a particular dimension in netcdf file.  More...
 

+integer function pio_nf::inquire_dimension_id (ncid, dimid, name, len)
 Get information about a particular dimension in netcdf file. 
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inquire_dimension_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
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+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inquire_dimension_desc (type(file_desc_t), intent(in) file, 
integer, intent(in) dimid, 
character (len = *), intent(out), optional name, 
integer, intent(out), optional len 
)

+

+
+
Get information about a particular dimension in netcdf file. 

+
Parameters

+  
+    
+    
+    
+    
+  
ncid: A netcdf file descriptor returned by PIO_openfile or PIO_createfile. 
dimid: The netcdf dimension ID. 
name: The name of the dimension. 
len: The length of the dimesions name. 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__inquire__variable.html b/docs/group___p_i_o__inquire__variable.html
new file mode 100644
index 00000000000..cbbd5690e15
--- /dev/null
+++ b/docs/group___p_i_o__inquire__variable.html
@@ -0,0 +1,172 @@
+
+
+
+
+
+
+
+PIO: PIO_inquire_variable
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_inquire_variable
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::inquire_variable_desc (file, vardesc, name, xtype, ndims, dimids, natts)
 Inquires if a NetCDF variable is present and returns its attributes.  More...
 

+integer function pio_nf::inquire_variable_vid (file, varid, name, xtype, ndims, dimids, natts)
 Inquires if a NetCDF variable is present and returns its attributes. 
 

+integer function pio_nf::inquire_variable_id (ncid, varid, name, xtype, ndims, dimids, natts)
 Inquires if a NetCDF variable is present and returns its attributes. 
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ inquire_variable_desc()

+
+

+

+      
+        
+          
+          
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+        
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+        
+        
+          
+          
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+        
+        
+          
+          
+          
+        
+      
integer function pio_nf::inquire_variable_desc (type(file_desc_t), intent(in) file, 
type(var_desc_t), intent(in) vardesc, 
character (len = *), intent(out), optional name, 
integer, intent(out), optional xtype, 
integer, intent(out), optional ndims, 
integer, dimension(:), intent(out), optional dimids, 
integer, intent(out), optional natts 
)

+

+
+
Inquires if a NetCDF variable is present and returns its attributes. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+    
+  
ncid: A netcdf file descriptor returned by PIO_openfile or PIO_createfile. 
vardescVariable description structure.
name: The name of the variable 
xtype: The type of the variable 
ndims: The number of dimensions for the variable. 
dimids: The dimension identifier returned by PIO_def_dim 
natts: Number of attributes associated with the variable 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__iotype.html b/docs/group___p_i_o__iotype.html
new file mode 100644
index 00000000000..2b664abf638
--- /dev/null
+++ b/docs/group___p_i_o__iotype.html
@@ -0,0 +1,85 @@
+
+
+
+
+
+
+
+PIO: PIO_iotype
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+
PIO_iotype
  

+

+

+
+
An integer parameter which controls the iotype.  
+More...

+
An integer parameter which controls the iotype. 

+
    
+
  • PIO_iotype_pnetcdf : parallel read/write of pNetCDF files (netcdf3)
    • 
+
  • PIO_iotype_netcdf : serial read/write of NetCDF files using 'base_node' (netcdf3)
    • 
+
  • PIO_iotype_netcdf4c : parallel read/serial write of NetCDF4 (HDF5) files with data compression
    • 
+
  • PIO_iotype_netcdf4p : parallel read/write of NETCDF4 (HDF5) files 
    • 
+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__kinds.html b/docs/group___p_i_o__kinds.html
new file mode 100644
index 00000000000..e0d0413dea6
--- /dev/null
+++ b/docs/group___p_i_o__kinds.html
@@ -0,0 +1,85 @@
+
+
+
+
+
+
+
+PIO: PIO_kinds
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+
PIO_kinds
  

+

+

+
+
The base types supported by PIO are:  
+More...

+
The base types supported by PIO are: 

+
    
+
  • PIO_double : 8-byte reals or double precision
    • 
+
  • PIO_real : 4-byte reals
    • 
+
  • PIO_int : 4-byte integers
    • 
+
  • PIO_char : character 
    • 
+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__openfile.html b/docs/group___p_i_o__openfile.html
new file mode 100644
index 00000000000..f91998aed88
--- /dev/null
+++ b/docs/group___p_i_o__openfile.html
@@ -0,0 +1,337 @@
+
+
+
+
+
+
+
+PIO: PIO_openfile
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_openfile
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function, public piolib_mod::pio_openfile (iosystem, file, iotype, fname, mode)
 open an existing file using pio  More...
 
int PIOc_openfile (int iosysid, int *ncidp, int *iotype, const char *filename, int mode)
 Open an existing file using PIO library.  More...
 
int PIOc_openfile2 (int iosysid, int *ncidp, int *iotype, const char *filename, int mode)
 Open an existing file using PIO library.  More...
 
int PIOc_open (int iosysid, const char *path, int mode, int *ncidp)
 Open an existing file using PIO library.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ pio_openfile()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
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+        
+          
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+          
+        
+        
+          
+          
+          
+        
+      
integer function, public piolib_mod::pio_openfile (type (iosystem_desc_t), intent(inout), target iosystem, 
type (file_desc_t), intent(out) file, 
integer, intent(in) iotype, 
character(len=*), intent(in) fname, 
integer, intent(in), optional mode 
)

+

+
+
open an existing file using pio 

+
Input parameters are read on comp task 0 and ignored elsewhere. 
Parameters

+  
+    
+    
+    
+    
+    
+  
iosystem: a defined pio system descriptor created by a call to PIO_init (see PIO_types) 
file: the returned file descriptor 
iotype: An integer parameter which controls the iotype. 
fname: the name of the file to open 
mode: a zero value (or PIO_nowrite) specifies the default behavior: open the dataset with read-only access, buffering and caching accesses for efficiency otherwise, the creation mode is PIO_write. setting the PIO_write flag opens the dataset with read-write access. ("writing" means any kind of change to the dataset, including appending or changing data, adding or renaming dimensions, variables, and attributes, or deleting attributes.) 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ PIOc_open()

+
+

+

+      
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+        
+      
int PIOc_open (int iosysid, 
const char * path, 
int mode, 
int * ncidp 
)

+

+
+
Open an existing file using PIO library. 

+
Input parameters are read on comp task 0 and ignored elsewhere.

+
Parameters

+  
+    
+    
+    
+    
+  
iosysidA defined pio system descriptor 
pathThe filename to open 
modeThe netcdf mode for the open operation 
ncidppointer to int where ncid will go 

+  

+

+
Returns
0 for success, error code otherwise.

+
Author
Ed Hartnett 

+
+

+

+
+
◆ PIOc_openfile()

+
+

+

+      
+        
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+          
+          
+        
+      
int PIOc_openfile (int iosysid, 
int * ncidp, 
int * iotype, 
const char * filename, 
int mode 
)

+

+
+
Open an existing file using PIO library. 

+
If the open fails, try again as netCDF serial before giving up. Input parameters are read on comp task 0 and ignored elsewhere.

+
Note that the file is opened with default fill mode, NOFILL for pnetcdf, and FILL for netCDF classic and netCDF-4 files.

+
Parameters

+  
+    
+    
+    
+    
+    
+  
iosysid: A defined pio system descriptor (input) 
ncidp: A pio file descriptor (output) 
iotype: A pio output format (input) 
filename: The filename to open 
mode: The netcdf mode for the open operation 

+  

+

+
Returns
0 for success, error code otherwise.

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_openfile2()

+
+

+

+      
+        
+          
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+          
+          
+        
+      
int PIOc_openfile2 (int iosysid, 
int * ncidp, 
int * iotype, 
const char * filename, 
int mode 
)

+

+
+
Open an existing file using PIO library. 

+
This is like PIOc_openfile(), but if the open fails, this function will not try to open again as netCDF serial before giving up. Input parameters are read on comp task 0 and ignored elsewhere.

+
Note that the file is opened with default fill mode, NOFILL for pnetcdf, and FILL for netCDF classic and netCDF-4 files.

+
Parameters

+  
+    
+    
+    
+    
+    
+  
iosysid: A defined pio system descriptor (input) 
ncidp: A pio file descriptor (output) 
iotype: A pio output format (input) 
filename: The filename to open 
mode: The netcdf mode for the open operation 

+  

+

+
Returns
0 for success, error code otherwise.

+
Author
Ed Hartnett 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__put__att.html b/docs/group___p_i_o__put__att.html
new file mode 100644
index 00000000000..f58d1628396
--- /dev/null
+++ b/docs/group___p_i_o__put__att.html
@@ -0,0 +1,1424 @@
+
+
+
+
+
+
+
+PIO: PIO_put_att
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
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+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_put_att
  

+

+

+
+
Writes an netcdf attribute to a file.  
+More...

+
+
+
+
+
+
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+
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+
+
+
+
+
+
+
+
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+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pionfatt_mod::put_att_desc_text (File, vdesc, name, values)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfatt_mod::put_att_1d_id_real (ncid, varid, name, values)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfatt_mod::put_att_1d_id_double (ncid, varid, name, values)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfatt_mod::put_att_1d_id_int (ncid, varid, name, values)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfatt_mod::put_att_1d_desc_real (File, varDesc, name, values)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfatt_mod::put_att_1d_desc_int (File, varDesc, name, values)
 Writes an netcdf attribute to a file.  More...
 
integer function pionfatt_mod::put_att_1d_desc_double (File, varDesc, name, values)
 Writes an netcdf attribute to a file.  More...
 
int PIOc_put_att (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const void *op)
 Write a netCDF attribute of any type.  More...
 
int PIOc_put_att_schar (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const signed char *op)
 Write a netCDF attribute array of 8-bit signed chars.  More...
 
int PIOc_put_att_long (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const long *op)
 Write a netCDF attribute array of 32-bit signed integers.  More...
 
int PIOc_put_att_int (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const int *op)
 Write a netCDF attribute array of 32-bit signed integers.  More...
 
int PIOc_put_att_uchar (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned char *op)
 Write a netCDF attribute array of 8-bit unsigned chars.  More...
 
int PIOc_put_att_longlong (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const long long *op)
 Write a netCDF attribute array of 64-bit signed integers.  More...
 
int PIOc_put_att_uint (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned int *op)
 Write a netCDF attribute array of 32-bit unsigned integers.  More...
 
int PIOc_put_att_float (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const float *op)
 Write a netCDF attribute array of 32-bit floating points.  More...
 
int PIOc_put_att_ulonglong (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned long long *op)
 Write a netCDF attribute array of 64-bit unsigned integers.  More...
 
int PIOc_put_att_ushort (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned short *op)
 Write a netCDF attribute array of 16-bit unsigned integers.  More...
 
int PIOc_put_att_text (int ncid, int varid, const char *name, PIO_Offset len, const char *op)
 Write a netCDF text attribute.  More...
 
int PIOc_put_att_short (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const short *op)
 Write a netCDF attribute array of 16-bit integers.  More...
 
int PIOc_put_att_double (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const double *op)
 Write a netCDF attribute array of 64-bit floating points.  More...
 

+
Detailed Description

+
Writes an netcdf attribute to a file. 

+
Function/Subroutine Documentation

+
+
◆ PIOc_put_att()

+
+

+

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int PIOc_put_att (int ncid, 
int varid, 
const char * name, 
nc_type xtype, 
PIO_Offset len, 
const void * op 
)

+

+
+
Write a netCDF attribute of any type. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute. 
xtypethe nc_type of the attribute. 
lenthe length of the attribute array. 
opa pointer with the attribute data. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_put_att_double()

+
+

+

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int PIOc_put_att_double (int ncid, 
int varid, 
const char * name, 
nc_type xtype, 
PIO_Offset len, 
const double * op 
)

+

+
+
Write a netCDF attribute array of 64-bit floating points. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute. 
xtypethe nc_type of the attribute. 
lenthe length of the attribute array. 
opa pointer with the attribute data. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_put_att_float()

+
+

+

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int PIOc_put_att_float (int ncid, 
int varid, 
const char * name, 
nc_type xtype, 
PIO_Offset len, 
const float * op 
)

+

+
+
Write a netCDF attribute array of 32-bit floating points. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute. 
xtypethe nc_type of the attribute. 
lenthe length of the attribute array. 
opa pointer with the attribute data. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_put_att_int()

+
+

+

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int PIOc_put_att_int (int ncid, 
int varid, 
const char * name, 
nc_type xtype, 
PIO_Offset len, 
const int * op 
)

+

+
+
Write a netCDF attribute array of 32-bit signed integers. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute. 
xtypethe nc_type of the attribute. 
lenthe length of the attribute array. 
opa pointer with the attribute data. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_put_att_long()

+
+

+

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int PIOc_put_att_long (int ncid, 
int varid, 
const char * name, 
nc_type xtype, 
PIO_Offset len, 
const long * op 
)

+

+
+
Write a netCDF attribute array of 32-bit signed integers. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute. 
xtypethe nc_type of the attribute. 
lenthe length of the attribute array. 
opa pointer with the attribute data. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_put_att_longlong()

+
+

+

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int PIOc_put_att_longlong (int ncid, 
int varid, 
const char * name, 
nc_type xtype, 
PIO_Offset len, 
const long long * op 
)

+

+
+
Write a netCDF attribute array of 64-bit signed integers. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute. 
xtypethe nc_type of the attribute. 
lenthe length of the attribute array. 
opa pointer with the attribute data. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_put_att_schar()

+
+

+

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int PIOc_put_att_schar (int ncid, 
int varid, 
const char * name, 
nc_type xtype, 
PIO_Offset len, 
const signed char * op 
)

+

+
+
Write a netCDF attribute array of 8-bit signed chars. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute. 
xtypethe nc_type of the attribute. 
lenthe length of the attribute array. 
opa pointer with the attribute data. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_put_att_short()

+
+

+

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+        
+      
int PIOc_put_att_short (int ncid, 
int varid, 
const char * name, 
nc_type xtype, 
PIO_Offset len, 
const short * op 
)

+

+
+
Write a netCDF attribute array of 16-bit integers. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute. 
xtypethe nc_type of the attribute. 
lenthe length of the attribute array. 
opa pointer with the attribute data. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_put_att_text()

+
+

+

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int PIOc_put_att_text (int ncid, 
int varid, 
const char * name, 
PIO_Offset len, 
const char * op 
)

+

+
+
Write a netCDF text attribute. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute. 
xtypethe nc_type of the attribute. 
lenthe length of the attribute array. 
opa pointer with the attribute data. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_put_att_uchar()

+
+

+

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int PIOc_put_att_uchar (int ncid, 
int varid, 
const char * name, 
nc_type xtype, 
PIO_Offset len, 
const unsigned char * op 
)

+

+
+
Write a netCDF attribute array of 8-bit unsigned chars. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute. 
xtypethe nc_type of the attribute. 
lenthe length of the attribute array. 
opa pointer with the attribute data. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_put_att_uint()

+
+

+

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int PIOc_put_att_uint (int ncid, 
int varid, 
const char * name, 
nc_type xtype, 
PIO_Offset len, 
const unsigned int * op 
)

+

+
+
Write a netCDF attribute array of 32-bit unsigned integers. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute. 
xtypethe nc_type of the attribute. 
lenthe length of the attribute array. 
opa pointer with the attribute data. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_put_att_ulonglong()

+
+

+

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int PIOc_put_att_ulonglong (int ncid, 
int varid, 
const char * name, 
nc_type xtype, 
PIO_Offset len, 
const unsigned long long * op 
)

+

+
+
Write a netCDF attribute array of 64-bit unsigned integers. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute. 
xtypethe nc_type of the attribute. 
lenthe length of the attribute array. 
opa pointer with the attribute data. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_put_att_ushort()

+
+

+

+      
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+      
int PIOc_put_att_ushort (int ncid, 
int varid, 
const char * name, 
nc_type xtype, 
PIO_Offset len, 
const unsigned short * op 
)

+

+
+
Write a netCDF attribute array of 16-bit unsigned integers. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
varidthe variable ID. 
namethe name of the attribute. 
xtypethe nc_type of the attribute. 
lenthe length of the attribute array. 
opa pointer with the attribute data. 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ put_att_1d_desc_double()

+
+

+

+      
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integer function pionfatt_mod::put_att_1d_desc_double (type (file_desc_t), intent(inout), target File, 
type (var_desc_t), intent(in) varDesc, 
character(len=*), intent(in) name, 
real(r8), dimension(:), intent(in) values 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varDescVariable description structure.
name: name of the attribute to add 
var: The value for the netcdf attribute 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_att_1d_desc_int()

+
+

+

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integer function pionfatt_mod::put_att_1d_desc_int (type (file_desc_t), intent(inout), target File, 
type (var_desc_t), intent(in) varDesc, 
character(len=*), intent(in) name, 
integer(i4), dimension(:), intent(in) values 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varDescVariable description structure.
name: name of the attribute to add 
var: The value for the netcdf attribute 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_att_1d_desc_real()

+
+

+

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integer function pionfatt_mod::put_att_1d_desc_real (type (file_desc_t), intent(inout), target File, 
type (var_desc_t), intent(in) varDesc, 
character(len=*), intent(in) name, 
real(r4), dimension(:), intent(in) values 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varDescVariable description structure.
name: name of the attribute to add 
var: The value for the netcdf attribute 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_att_1d_id_double()

+
+

+

+      
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+        
+      
integer function pionfatt_mod::put_att_1d_id_double (integer, intent(in) ncid, 
integer, intent(in) varid, 
character(len=*), intent(in) name, 
real(r8), dimension(:), intent(in) values 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
name: name of the attribute to add 
values: The value for the netcdf attribute 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_att_1d_id_int()

+
+

+

+      
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integer function pionfatt_mod::put_att_1d_id_int (integer, intent(in) ncid, 
integer, intent(in) varid, 
character(len=*), intent(in) name, 
integer(i4), dimension(:), intent(in) values 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
name: name of the attribute to add 
values: The value for the netcdf attribute 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

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+

+

+
+
◆ put_att_1d_id_real()

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integer function pionfatt_mod::put_att_1d_id_real (integer, intent(in) ncid, 
integer, intent(in) varid, 
character(len=*), intent(in) name, 
real(r4), dimension(:), intent(in) values 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
name: name of the attribute to add 
values: The value for the netcdf attribute 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_att_desc_text()

+
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integer function pionfatt_mod::put_att_desc_text (type (file_desc_t), intent(in) File, 
type(var_desc_t), intent(in) vdesc, 
character(len=*), intent(in) name, 
character(len=*), intent(in) values 
)

+

+
+
Writes an netcdf attribute to a file. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
name: name of the attribute to add 
var: The value for the netcdf attribute 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__put__var.html b/docs/group___p_i_o__put__var.html
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+PIO: PIO_put_var
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+  

+Functions/Subroutines  

+  

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PIO_put_var
  

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Writes data to a netCDF file.  
+More...

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+Functions/Subroutines
integer function pionfput_mod::put_var1_text (File, varid, index, ival)
 Write one element of data to a netCDF variable.  More...
 
integer function pionfput_mod::put_var1_int (File, varid, index, ival)
 Write one element of data to a netCDF variable.  More...
 
integer function pionfput_mod::put_var1_real (File, varid, index, ival)
 Write one element of data to a netCDF variable.  More...
 
integer function pionfput_mod::put_var1_double (File, varid, index, ival)
 Write one element of data to a netCDF variable.  More...
 
integer function pionfput_mod::put_var1_vdesc_text (File, vardesc, index, ival)
 Write one element of data to a netCDF variable.  More...
 
integer function pionfput_mod::put_var_0d_text (File, varid, ival)
 Writes a netCDF scalar variable.  More...
 
integer function pionfput_mod::put_var_1d_text (File, varid, ival)
 Writes text data to netcdf variable.  More...
 
integer function pionfput_mod::put_var_2d_text (File, varid, ival)
 Writes text data to netcdf variable.  More...
 
integer function pionfput_mod::put_var_3d_text (File, varid, ival)
 Writes text data to netcdf variable.  More...
 
integer function pionfput_mod::put_var_4d_text (File, varid, ival)
 Writes text data to netcdf variable.  More...
 
integer function pionfput_mod::put_var_5d_text (File, varid, ival)
 Writes text data to netcdf variable.  More...
 
integer function pionfput_mod::put_var_internal_int (ncid, varid, ival)
 Writes int data to a netCDF variable.  More...
 
integer function pionfput_mod::put_var_internal_real (ncid, varid, ival)
 Writes real data to a netCDF variable.  More...
 
integer function pionfput_mod::put_var_internal_double (ncid, varid, ival)
 Writes double data to a netCDF variable.  More...
 
integer function pionfput_mod::put_var_1d_int (File, varid, ival)
 Write int data to a netCDF varaible of 1 dimension(s).  More...
 
integer function pionfput_mod::put_var_2d_int (File, varid, ival)
 Write int data to a netCDF varaible of 2 dimension(s).  More...
 
integer function pionfput_mod::put_var_3d_int (File, varid, ival)
 Write int data to a netCDF varaible of 3 dimension(s).  More...
 
integer function pionfput_mod::put_var_4d_int (File, varid, ival)
 Write int data to a netCDF varaible of 4 dimension(s).  More...
 
integer function pionfput_mod::put_var_5d_int (File, varid, ival)
 Write int data to a netCDF varaible of 5 dimension(s).  More...
 
integer function pionfput_mod::put_var_1d_real (File, varid, ival)
 Write real data to a netCDF varaible of 1 dimension(s).  More...
 
integer function pionfput_mod::put_var_2d_real (File, varid, ival)
 Write real data to a netCDF varaible of 2 dimension(s).  More...
 
integer function pionfput_mod::put_var_3d_real (File, varid, ival)
 Write real data to a netCDF varaible of 3 dimension(s).  More...
 
integer function pionfput_mod::put_var_4d_real (File, varid, ival)
 Write real data to a netCDF varaible of 4 dimension(s).  More...
 
integer function pionfput_mod::put_var_5d_real (File, varid, ival)
 Write real data to a netCDF varaible of 5 dimension(s).  More...
 
integer function pionfput_mod::put_var_1d_double (File, varid, ival)
 Write double data to a netCDF varaible of 1 dimension(s).  More...
 
integer function pionfput_mod::put_var_2d_double (File, varid, ival)
 Write double data to a netCDF varaible of 2 dimension(s).  More...
 
integer function pionfput_mod::put_var_3d_double (File, varid, ival)
 Write double data to a netCDF varaible of 3 dimension(s).  More...
 
integer function pionfput_mod::put_var_4d_double (File, varid, ival)
 Write double data to a netCDF varaible of 4 dimension(s).  More...
 
integer function pionfput_mod::put_var_5d_double (File, varid, ival)
 Write double data to a netCDF varaible of 5 dimension(s).  More...
 
integer function pionfput_mod::put_var_0d_int (File, varid, ival)
 Writes int data to a netCDF scalar variable.  More...
 
integer function pionfput_mod::put_var_0d_real (File, varid, ival)
 Writes real data to a netCDF scalar variable.  More...
 
integer function pionfput_mod::put_var_0d_double (File, varid, ival)
 Writes double data to a netCDF scalar variable.  More...
 
integer function pionfput_mod::put_var_vdesc_0d_text (File, vardesc, ival)
 Write text data to a netcdf variable of 0 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_1d_text (File, vardesc, ival)
 Write text data to a netcdf variable of 1 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_2d_text (File, vardesc, ival)
 Write text data to a netcdf variable of 2 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_3d_text (File, vardesc, ival)
 Write text data to a netcdf variable of 3 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_4d_text (File, vardesc, ival)
 Write text data to a netcdf variable of 4 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_5d_text (File, vardesc, ival)
 Write text data to a netcdf variable of 5 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_0d_real (File, vardesc, ival)
 Write real data to a netcdf variable of 0 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_1d_real (File, vardesc, ival)
 Write real data to a netcdf variable of 1 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_2d_real (File, vardesc, ival)
 Write real data to a netcdf variable of 2 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_3d_real (File, vardesc, ival)
 Write real data to a netcdf variable of 3 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_4d_real (File, vardesc, ival)
 Write real data to a netcdf variable of 4 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_5d_real (File, vardesc, ival)
 Write real data to a netcdf variable of 5 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_0d_double (File, vardesc, ival)
 Write double data to a netcdf variable of 0 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_1d_double (File, vardesc, ival)
 Write double data to a netcdf variable of 1 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_2d_double (File, vardesc, ival)
 Write double data to a netcdf variable of 2 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_3d_double (File, vardesc, ival)
 Write double data to a netcdf variable of 3 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_4d_double (File, vardesc, ival)
 Write double data to a netcdf variable of 4 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_5d_double (File, vardesc, ival)
 Write double data to a netcdf variable of 5 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_0d_int (File, vardesc, ival)
 Write int data to a netcdf variable of 0 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_1d_int (File, vardesc, ival)
 Write int data to a netcdf variable of 1 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_2d_int (File, vardesc, ival)
 Write int data to a netcdf variable of 2 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_3d_int (File, vardesc, ival)
 Write int data to a netcdf variable of 3 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_4d_int (File, vardesc, ival)
 Write int data to a netcdf variable of 4 dimension(s).  More...
 
integer function pionfput_mod::put_var_vdesc_5d_int (File, vardesc, ival)
 Write int data to a netcdf variable of 5 dimension(s).  More...
 
integer function pionfput_mod::put_vara_1d_text (File, varid, start, count, ival)
 Write text data to a netcdf variable of 1 dimension(s).  More...
 
integer function pionfput_mod::put_vara_2d_text (File, varid, start, count, ival)
 Write text data to a netcdf variable of 2 dimension(s).  More...
 
integer function pionfput_mod::put_vara_3d_text (File, varid, start, count, ival)
 Write text data to a netcdf variable of 3 dimension(s).  More...
 
integer function pionfput_mod::put_vara_4d_text (File, varid, start, count, ival)
 Write text data to a netcdf variable of 4 dimension(s).  More...
 
integer function pionfput_mod::put_vara_5d_text (File, varid, start, count, ival)
 Write text data to a netcdf variable of 5 dimension(s).  More...
 
integer function pionfput_mod::put_vara_1d_int (File, varid, start, count, ival)
 Write int data to a netcdf variable of 1 dimension(s).  More...
 
integer function pionfput_mod::put_vara_2d_int (File, varid, start, count, ival)
 Write int data to a netcdf variable of 2 dimension(s).  More...
 
integer function pionfput_mod::put_vara_3d_int (File, varid, start, count, ival)
 Write int data to a netcdf variable of 3 dimension(s).  More...
 
integer function pionfput_mod::put_vara_4d_int (File, varid, start, count, ival)
 Write int data to a netcdf variable of 4 dimension(s).  More...
 
integer function pionfput_mod::put_vara_5d_int (File, varid, start, count, ival)
 Write int data to a netcdf variable of 5 dimension(s).  More...
 
integer function pionfput_mod::put_vara_1d_real (File, varid, start, count, ival)
 Write real data to a netcdf variable of 1 dimension(s).  More...
 
integer function pionfput_mod::put_vara_2d_real (File, varid, start, count, ival)
 Write real data to a netcdf variable of 2 dimension(s).  More...
 
integer function pionfput_mod::put_vara_3d_real (File, varid, start, count, ival)
 Write real data to a netcdf variable of 3 dimension(s).  More...
 
integer function pionfput_mod::put_vara_4d_real (File, varid, start, count, ival)
 Write real data to a netcdf variable of 4 dimension(s).  More...
 
integer function pionfput_mod::put_vara_5d_real (File, varid, start, count, ival)
 Write real data to a netcdf variable of 5 dimension(s).  More...
 
integer function pionfput_mod::put_vara_1d_double (File, varid, start, count, ival)
 Write double data to a netcdf variable of 1 dimension(s).  More...
 
integer function pionfput_mod::put_vara_2d_double (File, varid, start, count, ival)
 Write double data to a netcdf variable of 2 dimension(s).  More...
 
integer function pionfput_mod::put_vara_3d_double (File, varid, start, count, ival)
 Write double data to a netcdf variable of 3 dimension(s).  More...
 
integer function pionfput_mod::put_vara_4d_double (File, varid, start, count, ival)
 Write double data to a netcdf variable of 4 dimension(s).  More...
 
integer function pionfput_mod::put_vara_5d_double (File, varid, start, count, ival)
 Write double data to a netcdf variable of 5 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_1d_text (File, vardesc, start, count, ival)
 Write text data to a netcdf variable of 1 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_2d_text (File, vardesc, start, count, ival)
 Write text data to a netcdf variable of 2 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_3d_text (File, vardesc, start, count, ival)
 Write text data to a netcdf variable of 3 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_4d_text (File, vardesc, start, count, ival)
 Write text data to a netcdf variable of 4 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_5d_text (File, vardesc, start, count, ival)
 Write text data to a netcdf variable of 5 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_1d_real (File, vardesc, start, count, ival)
 Write real data to a netcdf variable of 1 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_2d_real (File, vardesc, start, count, ival)
 Write real data to a netcdf variable of 2 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_3d_real (File, vardesc, start, count, ival)
 Write real data to a netcdf variable of 3 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_4d_real (File, vardesc, start, count, ival)
 Write real data to a netcdf variable of 4 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_5d_real (File, vardesc, start, count, ival)
 Write real data to a netcdf variable of 5 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_1d_double (File, vardesc, start, count, ival)
 Write double data to a netcdf variable of 1 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_2d_double (File, vardesc, start, count, ival)
 Write double data to a netcdf variable of 2 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_3d_double (File, vardesc, start, count, ival)
 Write double data to a netcdf variable of 3 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_4d_double (File, vardesc, start, count, ival)
 Write double data to a netcdf variable of 4 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_5d_double (File, vardesc, start, count, ival)
 Write double data to a netcdf variable of 5 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_1d_int (File, vardesc, start, count, ival)
 Write int data to a netcdf variable of 1 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_2d_int (File, vardesc, start, count, ival)
 Write int data to a netcdf variable of 2 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_3d_int (File, vardesc, start, count, ival)
 Write int data to a netcdf variable of 3 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_4d_int (File, vardesc, start, count, ival)
 Write int data to a netcdf variable of 4 dimension(s).  More...
 
integer function pionfput_mod::put_vara_vdesc_5d_int (File, vardesc, start, count, ival)
 Write int data to a netcdf variable of 5 dimension(s).  More...
 

+
Detailed Description

+
Writes data to a netCDF file. 

+
The put_var interface is provided as a simplified interface to write variables to a netcdf format file. 
Warning
Although this is a collective call the variable is written from the root IO task, no consistancy check is made with data passed on other tasks. 

+
Function/Subroutine Documentation

+
+
◆ put_var1_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var1_double (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) index, 
real(r8), intent(in) ival 
)

+

+
+
Write one element of data to a netCDF variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
index: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var1_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var1_int (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) index, 
integer(i4), intent(in) ival 
)

+

+
+
Write one element of data to a netCDF variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
index: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var1_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var1_real (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) index, 
real(r4), intent(in) ival 
)

+

+
+
Write one element of data to a netCDF variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
index: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var1_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var1_text (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) index, 
character(len=*), intent(in) ival 
)

+

+
+
Write one element of data to a netCDF variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
index: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var1_vdesc_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var1_vdesc_text (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) index, 
character(len=*), intent(in) ival 
)

+

+
+
Write one element of data to a netCDF variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_0d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_0d_double (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
real(r8), intent(in) ival 
)

+

+
+
Writes double data to a netCDF scalar variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_0d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_0d_int (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer(i4), intent(in) ival 
)

+

+
+
Writes int data to a netCDF scalar variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_0d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_0d_real (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
real(r4), intent(in) ival 
)

+

+
+
Writes real data to a netCDF scalar variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_0d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_0d_text (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
character(len=*), intent(in) ival 
)

+

+
+
Writes a netCDF scalar variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf variable 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_1d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_1d_double (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
real(r8), dimension(:), intent(in) ival 
)

+

+
+
Write double data to a netCDF varaible of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_1d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_1d_int (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer(i4), dimension(:), intent(in) ival 
)

+

+
+
Write int data to a netCDF varaible of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_1d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_1d_real (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
real(r4), dimension(:), intent(in) ival 
)

+

+
+
Write real data to a netCDF varaible of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_1d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_1d_text (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
character(len=*), dimension(:), intent(in) ival 
)

+

+
+
Writes text data to netcdf variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_2d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_2d_double (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
real(r8), dimension(:,:), intent(in) ival 
)

+

+
+
Write double data to a netCDF varaible of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_2d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_2d_int (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer(i4), dimension(:,:), intent(in) ival 
)

+

+
+
Write int data to a netCDF varaible of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_2d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_2d_real (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
real(r4), dimension(:,:), intent(in) ival 
)

+

+
+
Write real data to a netCDF varaible of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_2d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_2d_text (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
character(len=*), dimension(:,:), intent(in) ival 
)

+

+
+
Writes text data to netcdf variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_3d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_3d_double (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
real(r8), dimension(:,:,:), intent(in) ival 
)

+

+
+
Write double data to a netCDF varaible of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_3d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_3d_int (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer(i4), dimension(:,:,:), intent(in) ival 
)

+

+
+
Write int data to a netCDF varaible of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_3d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_3d_real (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
real(r4), dimension(:,:,:), intent(in) ival 
)

+

+
+
Write real data to a netCDF varaible of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_3d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_3d_text (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
character(len=*), dimension(:,:,:), intent(in) ival 
)

+

+
+
Writes text data to netcdf variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_4d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_4d_double (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
real(r8), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Write double data to a netCDF varaible of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_4d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_4d_int (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer(i4), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Write int data to a netCDF varaible of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_4d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_4d_real (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
real(r4), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Write real data to a netCDF varaible of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_4d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_4d_text (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
character(len=*), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Writes text data to netcdf variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_5d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_5d_double (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
real(r8), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Write double data to a netCDF varaible of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_5d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_5d_int (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer(i4), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Write int data to a netCDF varaible of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_5d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_5d_real (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
real(r4), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Write real data to a netCDF varaible of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_5d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_5d_text (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
character(len=*), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Writes text data to netcdf variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_internal_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_internal_double (integer, intent(in) ncid, 
integer, intent(in) varid, 
real(r8), dimension(*), intent(in) ival 
)

+

+
+
Writes double data to a netCDF variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The data to write. 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_internal_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_internal_int (integer, intent(in) ncid, 
integer, intent(in) varid, 
integer(i4), dimension(*), intent(in) ival 
)

+

+
+
Writes int data to a netCDF variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The data to write. 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_internal_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_internal_real (integer, intent(in) ncid, 
integer, intent(in) varid, 
real(r4), dimension(*), intent(in) ival 
)

+

+
+
Writes real data to a netCDF variable. 

+
Parameters

+  
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
File: A file handle returne from PIO_openfile or PIO_createfile. 
varid: The netcdf variable identifier 
ival: The data to write. 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_0d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_0d_double (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
real(r8), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 0 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_0d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_0d_int (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer(i4), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 0 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_0d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_0d_real (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
real(r4), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 0 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_0d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_0d_text (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
character(len=*), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 0 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_1d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_1d_double (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
real(r8), dimension(:), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_1d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_1d_int (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer(i4), dimension(:), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_1d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_1d_real (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
real(r4), dimension(:), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_1d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_1d_text (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
character(len=*), dimension(:), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_2d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_2d_double (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
real(r8), dimension(:,:), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_2d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_2d_int (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer(i4), dimension(:,:), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_2d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_2d_real (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
real(r4), dimension(:,:), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_2d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_2d_text (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
character(len=*), dimension(:,:), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_3d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_3d_double (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
real(r8), dimension(:,:,:), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_3d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_3d_int (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer(i4), dimension(:,:,:), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_3d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_3d_real (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
real(r4), dimension(:,:,:), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_3d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_3d_text (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
character(len=*), dimension(:,:,:), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_4d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_4d_double (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
real(r8), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_4d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_4d_int (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer(i4), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_4d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_4d_real (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
real(r4), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_4d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_4d_text (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
character(len=*), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_5d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_5d_double (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
real(r8), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_5d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_5d_int (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer(i4), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_5d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_5d_real (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
real(r4), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_var_vdesc_5d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_var_vdesc_5d_text (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
character(len=*), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_1d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_1d_double (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_1d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_1d_int (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_1d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_1d_real (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_1d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_1d_text (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
character(len=*), dimension(:), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_2d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_2d_double (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_2d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_2d_int (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_2d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_2d_real (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_2d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_2d_text (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
character(len=*), dimension(:,:), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_3d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_3d_double (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:,:), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_3d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_3d_int (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:,:), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_3d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_3d_real (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:,:), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_3d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_3d_text (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
character(len=*), dimension(:,:,:), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_4d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_4d_double (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_4d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_4d_int (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_4d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_4d_real (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_4d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_4d_text (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
character(len=*), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_5d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_5d_double (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_5d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_5d_int (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_5d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_5d_real (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_5d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_5d_text (type (file_desc_t), intent(inout) File, 
integer, intent(in) varid, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
character(len=*), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
varid: The netcdf variable identifier 
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_1d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_1d_double (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_1d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_1d_int (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_1d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_1d_real (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_1d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_1d_text (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
character(len=*), dimension(:), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_2d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_2d_double (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_2d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_2d_int (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_2d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_2d_real (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_2d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_2d_text (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
character(len=*), dimension(:,:), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_3d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_3d_double (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:,:), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_3d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_3d_int (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:,:), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_3d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_3d_real (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:,:), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_3d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_3d_text (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
character(len=*), dimension(:,:,:), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_4d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_4d_double (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_4d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_4d_int (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_4d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_4d_real (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_4d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_4d_text (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
character(len=*), dimension(:,:,:,:), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_5d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_5d_double (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r8), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Write double data to a netcdf variable of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_5d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_5d_int (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
integer(i4), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Write int data to a netcdf variable of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_5d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_5d_real (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
real(r4), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Write real data to a netcdf variable of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ put_vara_vdesc_5d_text()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
integer function pionfput_mod::put_vara_vdesc_5d_text (type (file_desc_t), intent(inout) File, 
type(var_desc_t), intent(in) vardesc, 
integer, dimension(:), intent(in) start, 
integer, dimension(:), intent(in) count, 
character(len=*), dimension(:,:,:,:,:), intent(in) ival 
)

+

+
+
Write text data to a netcdf variable of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 
vardescVariable description structure.
start: 
count: 
ival: The value for the netcdf metadata 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__read__darray.html b/docs/group___p_i_o__read__darray.html
new file mode 100644
index 00000000000..0d4807cf283
--- /dev/null
+++ b/docs/group___p_i_o__read__darray.html
@@ -0,0 +1,1431 @@
+
+
+
+
+
+
+
+PIO: PIO_read_darray
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_read_darray
  

+

+

+
+
The overloaded PIO_read_darray function reads a distributed array from disk.  
+More...

+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
subroutine piodarray::read_darray_1d_real (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type real from a netCDF variable of 1 dimension(s).  More...
 
subroutine piodarray::read_darray_2d_real (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type real from a netCDF variable of 2 dimension(s).  More...
 
subroutine piodarray::read_darray_3d_real (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type real from a netCDF variable of 3 dimension(s).  More...
 
subroutine piodarray::read_darray_4d_real (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type real from a netCDF variable of 4 dimension(s).  More...
 
subroutine piodarray::read_darray_5d_real (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type real from a netCDF variable of 5 dimension(s).  More...
 
subroutine piodarray::read_darray_6d_real (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type real from a netCDF variable of 6 dimension(s).  More...
 
subroutine piodarray::read_darray_7d_real (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type real from a netCDF variable of 7 dimension(s).  More...
 
subroutine piodarray::read_darray_1d_int (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type int from a netCDF variable of 1 dimension(s).  More...
 
subroutine piodarray::read_darray_2d_int (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type int from a netCDF variable of 2 dimension(s).  More...
 
subroutine piodarray::read_darray_3d_int (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type int from a netCDF variable of 3 dimension(s).  More...
 
subroutine piodarray::read_darray_4d_int (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type int from a netCDF variable of 4 dimension(s).  More...
 
subroutine piodarray::read_darray_5d_int (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type int from a netCDF variable of 5 dimension(s).  More...
 
subroutine piodarray::read_darray_6d_int (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type int from a netCDF variable of 6 dimension(s).  More...
 
subroutine piodarray::read_darray_7d_int (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type int from a netCDF variable of 7 dimension(s).  More...
 
subroutine piodarray::read_darray_1d_double (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type double from a netCDF variable of 1 dimension(s).  More...
 
subroutine piodarray::read_darray_2d_double (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type double from a netCDF variable of 2 dimension(s).  More...
 
subroutine piodarray::read_darray_3d_double (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type double from a netCDF variable of 3 dimension(s).  More...
 
subroutine piodarray::read_darray_4d_double (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type double from a netCDF variable of 4 dimension(s).  More...
 
subroutine piodarray::read_darray_5d_double (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type double from a netCDF variable of 5 dimension(s).  More...
 
subroutine piodarray::read_darray_6d_double (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type double from a netCDF variable of 6 dimension(s).  More...
 
subroutine piodarray::read_darray_7d_double (File, varDesc, ioDesc, array, iostat)
 Read distributed array of type double from a netCDF variable of 7 dimension(s).  More...
 
int PIOc_read_darray (int ncid, int varid, int ioid, PIO_Offset arraylen, void *array)
 Read a field from a file to the IO library.  More...
 

+
Detailed Description

+
The overloaded PIO_read_darray function reads a distributed array from disk. 

+
Function/Subroutine Documentation

+
+
◆ PIOc_read_darray()

+
+

+

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int PIOc_read_darray (int ncid, 
int varid, 
int ioid, 
PIO_Offset arraylen, 
void * array 
)

+

+
+
Read a field from a file to the IO library. 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
ncididentifies the netCDF file 
varidthe variable ID to be read 
ioidthe I/O description ID as passed back by PIOc_InitDecomp(). 
arraylenthe length of the array to be read. This is the length of the distrubited array. That is, the length of the portion of the data that is on the processor. 
arraypointer to the data to be read. This is a pointer to the distributed portion of the array that is on this processor. 

+  

+

+
Returns
0 for success, error code otherwise.

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ read_darray_1d_double()

+
+

+

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subroutine piodarray::read_darray_1d_double (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r8), dimension(:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type double from a netCDF variable of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_1d_int()

+
+

+

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subroutine piodarray::read_darray_1d_int (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
integer(i4), dimension(:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type int from a netCDF variable of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_1d_real()

+
+

+

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subroutine piodarray::read_darray_1d_real (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r4), dimension(:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type real from a netCDF variable of 1 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_2d_double()

+
+

+

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subroutine piodarray::read_darray_2d_double (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r8), dimension(:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type double from a netCDF variable of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_2d_int()

+
+

+

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subroutine piodarray::read_darray_2d_int (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
integer(i4), dimension(:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type int from a netCDF variable of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_2d_real()

+
+

+

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subroutine piodarray::read_darray_2d_real (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r4), dimension(:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type real from a netCDF variable of 2 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_3d_double()

+
+

+

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subroutine piodarray::read_darray_3d_double (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r8), dimension(:,:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type double from a netCDF variable of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_3d_int()

+
+

+

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subroutine piodarray::read_darray_3d_int (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
integer(i4), dimension(:,:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type int from a netCDF variable of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_3d_real()

+
+

+

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subroutine piodarray::read_darray_3d_real (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r4), dimension(:,:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type real from a netCDF variable of 3 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_4d_double()

+
+

+

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subroutine piodarray::read_darray_4d_double (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r8), dimension(:,:,:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type double from a netCDF variable of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_4d_int()

+
+

+

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+        
+      
subroutine piodarray::read_darray_4d_int (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
integer(i4), dimension(:,:,:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type int from a netCDF variable of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_4d_real()

+
+

+

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subroutine piodarray::read_darray_4d_real (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r4), dimension(:,:,:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type real from a netCDF variable of 4 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_5d_double()

+
+

+

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subroutine piodarray::read_darray_5d_double (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r8), dimension(:,:,:,:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type double from a netCDF variable of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_5d_int()

+
+

+

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+      
subroutine piodarray::read_darray_5d_int (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
integer(i4), dimension(:,:,:,:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type int from a netCDF variable of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_5d_real()

+
+

+

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+        
+      
subroutine piodarray::read_darray_5d_real (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r4), dimension(:,:,:,:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type real from a netCDF variable of 5 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_6d_double()

+
+

+

+      
+        
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+        
+      
subroutine piodarray::read_darray_6d_double (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r8), dimension(:,:,:,:,:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type double from a netCDF variable of 6 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_6d_int()

+
+

+

+      
+        
+          
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+        
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+        
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+          
+          
+        
+      
subroutine piodarray::read_darray_6d_int (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
integer(i4), dimension(:,:,:,:,:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type int from a netCDF variable of 6 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_6d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::read_darray_6d_real (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r4), dimension(:,:,:,:,:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type real from a netCDF variable of 6 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_7d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::read_darray_7d_double (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r8), dimension(:,:,:,:,:,:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type double from a netCDF variable of 7 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_7d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::read_darray_7d_int (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
integer(i4), dimension(:,:,:,:,:,:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type int from a netCDF variable of 7 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+
+
◆ read_darray_7d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::read_darray_7d_real (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r4), dimension(:,:,:,:,:,:,:), intent(out) array, 
integer(i4), intent(out) iostat 
)

+

+
+
Read distributed array of type real from a netCDF variable of 7 dimension(s). 

+
Parameters

+  
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The read data 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__rearr__comm__dir.html b/docs/group___p_i_o__rearr__comm__dir.html
new file mode 100644
index 00000000000..e2f98350bfb
--- /dev/null
+++ b/docs/group___p_i_o__rearr__comm__dir.html
@@ -0,0 +1,85 @@
+
+
+
+
+
+
+
+PIO: PIO_rearr_comm_dir
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+
PIO_rearr_comm_dir
  

+

+

+
+
The four choices for rearranger communication direction.  
+More...

+
The four choices for rearranger communication direction. 

+
    
+
  • PIO_rearr_comm_fc_2d_enable : COMM procs to IO procs and vice versa
    • 
+
  • PIO_rearr_comm_fc_1d_comp2io: COMM procs to IO procs only
    • 
+
  • PIO_rearr_comm_fc_1d_io2comp: IO procs to COMM procs only
    • 
+
  • PIO_rearr_comm_fc_2d_disable: Disable flow control 
    • 
+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__rearr__comm__fc__options.html b/docs/group___p_i_o__rearr__comm__fc__options.html
new file mode 100644
index 00000000000..3377db9feaf
--- /dev/null
+++ b/docs/group___p_i_o__rearr__comm__fc__options.html
@@ -0,0 +1,84 @@
+
+
+
+
+
+
+
+PIO: PIO_rearr_comm_fc_options
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+
PIO_rearr_comm_fc_options
  

+

+

+
+
Type that defines the PIO rearranger options.  
+More...

+
Type that defines the PIO rearranger options. 

+
    
+
  • enable_hs : Enable handshake (true/false)
    • 
+
  • enable_isend : Enable Isends (true/false)
    • 
+
  • max_pend_req : Maximum pending requests (To indicated unlimited number of requests use PIO_REARR_COMM_UNLIMITED_PEND_REQ) 
    • 
+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__rearr__comm__t.html b/docs/group___p_i_o__rearr__comm__t.html
new file mode 100644
index 00000000000..97d7af50931
--- /dev/null
+++ b/docs/group___p_i_o__rearr__comm__t.html
@@ -0,0 +1,83 @@
+
+
+
+
+
+
+
+PIO: PIO_rearr_comm_t
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+
PIO_rearr_comm_t
  

+

+

+
+
The two choices for rearranger communication.  
+More...

+
The two choices for rearranger communication. 

+
    
+
  • PIO_rearr_comm_p2p : Point to point
    • 
+
  • PIO_rearr_comm_coll : Collective 
    • 
+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__rearr__method.html b/docs/group___p_i_o__rearr__method.html
new file mode 100644
index 00000000000..15eef5b2a6e
--- /dev/null
+++ b/docs/group___p_i_o__rearr__method.html
@@ -0,0 +1,84 @@
+
+
+
+
+
+
+
+PIO: PIO_rearr_method
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+
PIO_rearr_method
  

+

+

+
+
The three choices to control rearrangement are:  
+More...

+
The three choices to control rearrangement are: 

+
    
+
  • PIO_rearr_none : Do not use any form of rearrangement
    • 
+
  • PIO_rearr_box : Use a PIO internal box rearrangement
    • 
+

+
PIO_rearr_subset : Use a PIO internal subsetting rearrangement 

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__rearr__options.html b/docs/group___p_i_o__rearr__options.html
new file mode 100644
index 00000000000..5da7e11aa70
--- /dev/null
+++ b/docs/group___p_i_o__rearr__options.html
@@ -0,0 +1,93 @@
+
+
+
+
+
+
+
+PIO: PIO_rearr_options
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+
PIO_rearr_options
  

+

+

+
+
Type that defines the PIO rearranger options.  
+More...

+
Type that defines the PIO rearranger options. 

+
    
+
  • comm_type : The two choices for rearranger communication.
    • 
+
  • PIO_rearr_comm_p2p : Point to point
    • 
+
  • PIO_rearr_comm_coll : Collective
    • 
+
  • fcd : The four choices for rearranger communication direction.
    • 
+
  • PIO_rearr_comm_fc_2d_enable : COMM procs to IO procs and vice versa
    • 
+
  • PIO_rearr_comm_fc_1d_comp2io: COMM procs to IO procs only
    • 
+
  • PIO_rearr_comm_fc_1d_io2comp: IO procs to COMM procs only
    • 
+
  • PIO_rearr_comm_fc_2d_disable: Disable flow control
    • 
+
  • comm_fc_opts : Type that defines the PIO rearranger options.
    • 
+
  • enable_hs : Enable handshake (true/false)
    • 
+
  • enable_isend : Enable Isends (true/false)
    • 
+
  • max_pend_req : Maximum pending requests (To indicated unlimited number of requests use PIO_REARR_COMM_UNLIMITED_PEND_REQ) 
    • 
+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__redef.html b/docs/group___p_i_o__redef.html
new file mode 100644
index 00000000000..be048442c5b
--- /dev/null
+++ b/docs/group___p_i_o__redef.html
@@ -0,0 +1,173 @@
+
+
+
+
+
+
+
+PIO: PIO_redef
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_redef
  

+

+

+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
integer function pio_nf::redef_desc (File)
 Exits netcdf define mode.  More...
 
integer function pio_nf::redef_id (ncid)
 Wrapper for the C function PIOc_redef .  More...
 
int PIOc_redef (int ncid)
 The PIO-C interface for the NetCDF function nc_redef.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ PIOc_redef()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
int PIOc_redef (int ncid)

+

+
+
The PIO-C interface for the NetCDF function nc_redef. 

+
This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__datasets.html

+
Parameters

+  
+    
+  
ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 

+  

+

+
Returns
PIO_NOERR for success, error code otherwise. 

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ redef_desc()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
integer function pio_nf::redef_desc (type (file_desc_t), intent(inout) File)

+

+
+
Exits netcdf define mode. 

+
Parameters

+  
+    
+  
FileFile descriptor structure. This structure holds information associated with each open file 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+
+

+

+
+
◆ redef_id()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
integer function pio_nf::redef_id (integer, intent(in) ncid)

+

+
+
Wrapper for the C function PIOc_redef . 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__set__blocksize.html b/docs/group___p_i_o__set__blocksize.html
new file mode 100644
index 00000000000..47a0d35148a
--- /dev/null
+++ b/docs/group___p_i_o__set__blocksize.html
@@ -0,0 +1,118 @@
+
+
+
+
+
+
+
+PIO: PIO_set_blocksize
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_set_blocksize
  

+

+

+
+
+
+
+
+
+
+
+

+Functions/Subroutines

+subroutine pio::pio_set_blocksize (blocksize)
 Set the target blocksize for the box rearranger. 
 
int PIOc_set_blocksize (int newblocksize)
 Set the target blocksize for the box rearranger.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ PIOc_set_blocksize()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
int PIOc_set_blocksize (int newblocksize)

+

+
+
Set the target blocksize for the box rearranger. 

+
Parameters

+  
+    
+  
newblocksizethe new blocksize. 

+  

+

+
Returns
0 for success.

+
Author
Jim Edwards 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__set__hint.html b/docs/group___p_i_o__set__hint.html
new file mode 100644
index 00000000000..f8f9c0ca47c
--- /dev/null
+++ b/docs/group___p_i_o__set__hint.html
@@ -0,0 +1,93 @@
+
+
+
+
+
+
+
+PIO: PIO_set_hint
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+
PIO_set_hint
  

+

+

+
+
set file system hints using mpi_info_set  
+More...

+
set file system hints using mpi_info_set 

+
This is a collective call which expects the following parameters: 
Parameters

+  
+    
+    
+    
+  
iosystemIO descriptor structure. This structure defines the mapping for a given variable between compute and IO decomposition. 
hintthe string name of the hint to define 
hintvalthe string value to set the hint to 

+  

+

+
Return values

+  
+    
+  
ierr: The error return code; ierr != PIO_noerr indicates an error. (see PIO_seterrorhandling ) 

+  

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__set__log__level.html b/docs/group___p_i_o__set__log__level.html
new file mode 100644
index 00000000000..f574ae511f6
--- /dev/null
+++ b/docs/group___p_i_o__set__log__level.html
@@ -0,0 +1,76 @@
+
+
+
+
+
+
+
+PIO: PIO_set_log_level
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+
PIO_set_log_level
  

+

+

+
Detailed Description

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__setdebuglevel.html b/docs/group___p_i_o__setdebuglevel.html
new file mode 100644
index 00000000000..98d73662b16
--- /dev/null
+++ b/docs/group___p_i_o__setdebuglevel.html
@@ -0,0 +1,116 @@
+
+
+
+
+
+
+
+PIO: PIO_setdebuglevel
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_setdebuglevel
  

+

+

+
+
sets the level of debug information that pio will generate.  
+More...

+
+
+
+
+
+

+Functions/Subroutines
subroutine piolib_mod::setdebuglevel (level)
 sets the level of debug information output to stdout by pio  More...
 

+
Detailed Description

+
sets the level of debug information that pio will generate. 

+
Function/Subroutine Documentation

+
+
◆ setdebuglevel()

+
+

+

+      
+        
+          
+          
+          
+          
+          
+        
+      
subroutine piolib_mod::setdebuglevel (integer(i4), intent(in) level)

+

+
+
sets the level of debug information output to stdout by pio 

+
Parameters

+  
+    
+  
level: default value is 0, allowed values 0-6 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__seterrorhandling.html b/docs/group___p_i_o__seterrorhandling.html
new file mode 100644
index 00000000000..bdee413b2de
--- /dev/null
+++ b/docs/group___p_i_o__seterrorhandling.html
@@ -0,0 +1,243 @@
+
+
+
+
+
+
+
+PIO: PIO_seterrorhandling
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+Functions/Subroutines  

+  

+
PIO_seterrorhandling
  

+

+

+
+
sets the form of error handling for pio.  
+More...

+
+
+
+
+
+
+
+
+
+
+
+

+Functions/Subroutines
subroutine piolib_mod::seterrorhandlingfile (file, method, oldmethod)
 set the pio error handling method for a file  More...
 
subroutine piolib_mod::seterrorhandlingiosystem (iosystem, method, oldmethod)
 set the pio error handling method for a pio system  More...
 
subroutine piolib_mod::seterrorhandlingiosysid (iosysid, method, oldmethod)
 set the pio error handling method for a pio system or globally  More...
 

+
Detailed Description

+
sets the form of error handling for pio. 

+
By default pio handles errors internally by printing a string describing the error and calling mpi_abort. Application developers can change this behavior for calls to the underlying netcdf libraries with a call to PIO_seterrorhandling. For example if a developer wanted to see if an input netcdf format file contained the variable 'u' they might write the following 
 
Function/Subroutine Documentation

+
+
◆ seterrorhandlingfile()

+
+

+

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subroutine piolib_mod::seterrorhandlingfile (type(file_desc_t), intent(inout) file, 
integer, intent(in) method, 
integer, intent(out), optional oldmethod 
)

+

+
+
set the pio error handling method for a file 

+
Parameters

+  
+    
+    
+  
fileFile descriptor structure. This structure holds information associated with each open file 
method:

+  

+

+
The three types of error handling methods are:
    
+
  • PIO_INTERNAL_ERROR : abort on error from any task
    • 
+
  • PIO_BCAST_ERROR : broadcast an error from io_rank 0 to all tasks in comm
    • 
+
  • PIO_RETURN_ERROR : do nothing - allow the user to handle it
    • 
+

+
Use this instead of ios to set error handling for the library. 

+
+

+

+
+
◆ seterrorhandlingiosysid()

+
+

+

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subroutine piolib_mod::seterrorhandlingiosysid (integer, intent(in) iosysid, 
integer, intent(in) method, 
integer, intent(out), optional oldmethod 
)

+

+
+
set the pio error handling method for a pio system or globally 

+
Parameters

+  
+    
+    
+  
iosysid: a pio system ID (pass PIO_DEFAULT to change the global default error handling) 
method:

+  

+

+
The three types of error handling methods are:
    
+
  • PIO_INTERNAL_ERROR : abort on error from any task
    • 
+
  • PIO_BCAST_ERROR : broadcast an error from io_rank 0 to all tasks in comm
    • 
+
  • PIO_RETURN_ERROR : do nothing - allow the user to handle it
    • 
+

+
Use this instead of ios to set error handling for the library. 

+
+

+

+
+
◆ seterrorhandlingiosystem()

+
+

+

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subroutine piolib_mod::seterrorhandlingiosystem (type(iosystem_desc_t), intent(inout) iosystem, 
integer, intent(in) method, 
integer, intent(out), optional oldmethod 
)

+

+
+
set the pio error handling method for a pio system 

+
Parameters

+  
+    
+    
+  
iosystem: a defined pio system descriptor, see PIO_types 
method:

+  

+

+
The three types of error handling methods are:
    
+
  • PIO_INTERNAL_ERROR : abort on error from any task
    • 
+
  • PIO_BCAST_ERROR : broadcast an error from io_rank 0 to all tasks in comm
    • 
+
  • PIO_RETURN_ERROR : do nothing - allow the user to handle it
    • 
+

+
Use this instead of ios to set error handling for the library. 

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__setframe.html b/docs/group___p_i_o__setframe.html
new file mode 100644
index 00000000000..741c1ddf80b
--- /dev/null
+++ b/docs/group___p_i_o__setframe.html
@@ -0,0 +1,182 @@
+
+
+
+
+
+
+
+PIO: PIO_setframe
+
+
+
+
+
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+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

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+Functions/Subroutines  

+  

+
PIO_setframe
  

+

+

+
+
sets the unlimited dimension for netcdf file  
+More...

+
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+Functions/Subroutines
subroutine piolib_mod::setframe (file, vardesc, frame)
 sets the record dimension of a variable in a netcdf format file or the block address in a binary file  More...
 
int PIOc_setframe (int ncid, int varid, int frame)
 Set the unlimited dimension of the given variable.  More...
 

+
Detailed Description

+
sets the unlimited dimension for netcdf file 

+
Function/Subroutine Documentation

+
+
◆ PIOc_setframe()

+
+

+

+      
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int PIOc_setframe (int ncid, 
int varid, 
int frame 
)

+

+
+
Set the unlimited dimension of the given variable. 

+
Parameters

+  
+    
+    
+    
+  
ncidthe ncid of the file. 
varidthe varid of the variable 
framethe value of the unlimited dimension. In c 0 for the first record, 1 for the second 

+  

+

+
Returns
PIO_NOERR for no error, or error code.

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ setframe()

+
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subroutine piolib_mod::setframe (type(file_desc_t) file, 
type(var_desc_t), intent(inout) vardesc, 
integer(pio_offset_kind), intent(in) frame 
)

+

+
+
sets the record dimension of a variable in a netcdf format file or the block address in a binary file 

+
Parameters

+  
+    
+    
+  
vardescVariable description structure.
frame: frame number to set 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__strerror.html b/docs/group___p_i_o__strerror.html
new file mode 100644
index 00000000000..c100a94c5a3
--- /dev/null
+++ b/docs/group___p_i_o__strerror.html
@@ -0,0 +1,76 @@
+
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+PIO: PIO_strerror
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+ 
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+    2.4.0
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PIO_strerror
  

+

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+
Detailed Description

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__syncfile.html b/docs/group___p_i_o__syncfile.html
new file mode 100644
index 00000000000..6f474dd738c
--- /dev/null
+++ b/docs/group___p_i_o__syncfile.html
@@ -0,0 +1,112 @@
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+PIO: PIO_syncfile
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+    2.4.0
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+Functions/Subroutines  

+  

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PIO_syncfile
  

+

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+

+Functions/Subroutines
subroutine piolib_mod::syncfile (file)
 synchronizing a file forces all writes to complete before the subroutine returns.  More...
 

+
Detailed Description

+
Function/Subroutine Documentation

+
+
◆ syncfile()

+
+

+

+      
+        
+          
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+          
+          
+        
+      
subroutine piolib_mod::syncfile (type (file_desc_t), target file)

+

+
+
synchronizing a file forces all writes to complete before the subroutine returns. 

+
Parameters

+  
+    
+  
fileFile descriptor structure. This structure holds information associated with each open file 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group___p_i_o__write__darray.html b/docs/group___p_i_o__write__darray.html
new file mode 100644
index 00000000000..2e6881e9547
--- /dev/null
+++ b/docs/group___p_i_o__write__darray.html
@@ -0,0 +1,1763 @@
+
+
+
+
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+
+
+PIO: PIO_write_darray
+
+
+
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+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
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PIO
+    2.4.0
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+  

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+

+
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+  

+Functions/Subroutines  

+  

+
PIO_write_darray
  

+

+

+
+
The overloaded PIO_write_darray writes a distributed array to disk.  
+More...

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+Functions/Subroutines
subroutine piodarray::write_darray_multi_1d_real (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 1D array of type real.  More...
 
subroutine piodarray::write_darray_multi_1d_int (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 1D array of type int.  More...
 
subroutine piodarray::write_darray_multi_1d_double (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 1D array of type double.  More...
 
subroutine piodarray::write_darray_2d_real (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 2D array of type real.  More...
 
subroutine piodarray::write_darray_3d_real (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 3D array of type real.  More...
 
subroutine piodarray::write_darray_4d_real (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 4D array of type real.  More...
 
subroutine piodarray::write_darray_5d_real (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 5D array of type real.  More...
 
subroutine piodarray::write_darray_6d_real (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 6D array of type real.  More...
 
subroutine piodarray::write_darray_7d_real (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 7D array of type real.  More...
 
subroutine piodarray::write_darray_2d_int (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 2D array of type int.  More...
 
subroutine piodarray::write_darray_3d_int (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 3D array of type int.  More...
 
subroutine piodarray::write_darray_4d_int (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 4D array of type int.  More...
 
subroutine piodarray::write_darray_5d_int (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 5D array of type int.  More...
 
subroutine piodarray::write_darray_6d_int (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 6D array of type int.  More...
 
subroutine piodarray::write_darray_7d_int (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 7D array of type int.  More...
 
subroutine piodarray::write_darray_2d_double (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 2D array of type double.  More...
 
subroutine piodarray::write_darray_3d_double (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 3D array of type double.  More...
 
subroutine piodarray::write_darray_4d_double (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 4D array of type double.  More...
 
subroutine piodarray::write_darray_5d_double (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 5D array of type double.  More...
 
subroutine piodarray::write_darray_6d_double (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 6D array of type double.  More...
 
subroutine piodarray::write_darray_7d_double (File, varDesc, ioDesc, array, iostat, fillval)
 Writes a 7D array of type double.  More...
 
int PIOc_write_darray_multi (int ncid, const int *varids, int ioid, int nvars, PIO_Offset arraylen, void *array, const int *frame, void **fillvalue, bool flushtodisk)
 Write one or more arrays with the same IO decomposition to the file.  More...
 
int find_var_fillvalue (file_desc_t *file, int varid, var_desc_t *vdesc)
 Find the fillvalue that should be used for a variable.  More...
 
int PIOc_write_darray (int ncid, int varid, int ioid, PIO_Offset arraylen, void *array, void *fillvalue)
 Write a distributed array to the output file.  More...
 

+
Detailed Description

+
The overloaded PIO_write_darray writes a distributed array to disk. 

+
Function/Subroutine Documentation

+
+
◆ find_var_fillvalue()

+
+

+

+      
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int find_var_fillvalue (file_desc_t * file, 
int varid, 
var_desc_t * vdesc 
)

+

+
+
Find the fillvalue that should be used for a variable. 

+
Parameters

+  
+    
+    
+    
+  
fileInfo about file we are writing to. 
varidthe variable ID. 
vdescpointer to var_desc_t info for this var. 

+  

+

+
Returns
0 for success, non-zero error code for failure.

+
Author
Ed Hartnett 

+
+

+

+
+
◆ PIOc_write_darray()

+
+

+

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int PIOc_write_darray (int ncid, 
int varid, 
int ioid, 
PIO_Offset arraylen, 
void * array, 
void * fillvalue 
)

+

+
+
Write a distributed array to the output file. 

+
This routine aggregates output on the compute nodes and only sends it to the IO nodes when the compute buffer is full or when a flush is triggered.

+
Internally, this function will: 
    
+
  • 
+Locate info about this file, decomposition, and variable. 
    • 
+
  • 
+If we don't have a fillvalue for this variable, determine one and remember it for future calls. 
    • 
+
  • 
+Initialize or find the multi_buffer for this record/var. 
    • 
+
  • 
+Find out how much free space is available in the multi buffer and flush if needed. 
    • 
+
  • 
+Store the new user data in the mutli buffer. 
    • 
+
  • 
+If needed (only for subset rearranger), fill in gaps in data with fillvalue. 
    • 
+
  • 
+Remember the frame value (i.e. record number) of this data if there is one. 
    • 
+

+
NOTE: The write multi buffer wmulti_buffer is the cache on compute nodes that will collect and store multiple variables before sending them to the io nodes. Aggregating variables in this way leads to a considerable savings in communication expense. Variables in the wmb array must have the same decomposition and base data size and we also need to keep track of whether each is a recordvar (has an unlimited dimension) or not.

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
ncidthe ncid of the open netCDF file. 
varidthe ID of the variable that these data will be written to. 
ioidthe I/O description ID as passed back by PIOc_InitDecomp(). 
arraylenthe length of the array to be written. This should be at least the length of the local component of the distrubited array. (Any values beyond length of the local component will be ignored.) 
arraypointer to an array of length arraylen with the data to be written. This is a pointer to the distributed portion of the array that is on this task. 
fillvaluepointer to the fill value to be used for missing data. 

+  

+

+
Returns
0 for success, non-zero error code for failure.

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ PIOc_write_darray_multi()

+
+

+

+      
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int PIOc_write_darray_multi (int ncid, 
const int * varids, 
int ioid, 
int nvars, 
PIO_Offset arraylen, 
void * array, 
const int * frame, 
void ** fillvalue, 
bool flushtodisk 
)

+

+
+
Write one or more arrays with the same IO decomposition to the file. 

+
This funciton is similar to PIOc_write_darray(), but allows the caller to use their own data buffering (instead of using the buffering implemented in PIOc_write_darray()).

+
When the user calls PIOc_write_darray() one or more times, then PIO_write_darray_multi() will be called when the buffer is flushed.

+
Internally, this function will: 
    
+
  • 
+Find info about file, decomposition, and variable. 
    • 
+
  • 
+Do a special flush for pnetcdf if needed. 
    • 
+
  • 
+Allocates a buffer big enough to hold all the data in the multi-buffer, for all tasks. 
    • 
+
  • 
+Calls rearrange_comp2io() to move data from compute to IO tasks. 
    • 
+
  • 
+For parallel iotypes (pnetcdf and netCDF-4 parallel) call pio_write_darray_multi_nc(). 
    • 
+
  • 
+For serial iotypes (netcdf classic and netCDF-4 serial) call write_darray_multi_serial(). 
    • 
+
  • 
+For subset rearranger, create holegrid to write missing data. Then call pio_write_darray_multi_nc() or write_darray_multi_serial() to write the holegrid. 
    • 
+
  • 
+Special buffer flush for pnetcdf. 
    • 
+

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+    
+    
+    
+  
ncididentifies the netCDF file. 
varidsan array of length nvars containing the variable ids to be written. 
ioidthe I/O description ID as passed back by PIOc_InitDecomp(). 
nvarsthe number of variables to be written with this call. 
arraylenthe length of the array to be written. This is the length of the distrubited array. That is, the length of the portion of the data that is on the processor. The same arraylen is used for all variables in the call. 
arraypointer to the data to be written. This is a pointer to an array of arrays with the distributed portion of the array that is on this processor. There are nvars arrays of data, and each array of data contains one record worth of data for that variable. 
framean array of length nvars with the frame or record dimension for each of the nvars variables in IOBUF. NULL if this iodesc contains non-record vars. 
fillvaluepointer an array (of length nvars) of pointers to the fill value to be used for missing data. 
flushtodisknon-zero to cause buffers to be flushed to disk. 

+  

+

+
Returns
0 for success, error code otherwise.

+
Author
Jim Edwards, Ed Hartnett 

+
+

+

+
+
◆ write_darray_2d_double()

+
+

+

+      
+        
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subroutine piodarray::write_darray_2d_double (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r8), dimension(:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
real(r8), intent(in), optional fillval 
)

+

+
+
Writes a 2D array of type double. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_2d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_2d_int (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
integer(i4), dimension(:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
integer(i4), intent(in), optional fillval 
)

+

+
+
Writes a 2D array of type int. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_2d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_2d_real (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r4), dimension(:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
real(r4), intent(in), optional fillval 
)

+

+
+
Writes a 2D array of type real. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_3d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_3d_double (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r8), dimension(:,:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
real(r8), intent(in), optional fillval 
)

+

+
+
Writes a 3D array of type double. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_3d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_3d_int (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
integer(i4), dimension(:,:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
integer(i4), intent(in), optional fillval 
)

+

+
+
Writes a 3D array of type int. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_3d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_3d_real (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r4), dimension(:,:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
real(r4), intent(in), optional fillval 
)

+

+
+
Writes a 3D array of type real. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_4d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_4d_double (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r8), dimension(:,:,:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
real(r8), intent(in), optional fillval 
)

+

+
+
Writes a 4D array of type double. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_4d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_4d_int (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
integer(i4), dimension(:,:,:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
integer(i4), intent(in), optional fillval 
)

+

+
+
Writes a 4D array of type int. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_4d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_4d_real (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r4), dimension(:,:,:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
real(r4), intent(in), optional fillval 
)

+

+
+
Writes a 4D array of type real. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_5d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_5d_double (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r8), dimension(:,:,:,:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
real(r8), intent(in), optional fillval 
)

+

+
+
Writes a 5D array of type double. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_5d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_5d_int (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
integer(i4), dimension(:,:,:,:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
integer(i4), intent(in), optional fillval 
)

+

+
+
Writes a 5D array of type int. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_5d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_5d_real (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r4), dimension(:,:,:,:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
real(r4), intent(in), optional fillval 
)

+

+
+
Writes a 5D array of type real. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_6d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_6d_double (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r8), dimension(:,:,:,:,:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
real(r8), intent(in), optional fillval 
)

+

+
+
Writes a 6D array of type double. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_6d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_6d_int (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
integer(i4), dimension(:,:,:,:,:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
integer(i4), intent(in), optional fillval 
)

+

+
+
Writes a 6D array of type int. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_6d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_6d_real (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r4), dimension(:,:,:,:,:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
real(r4), intent(in), optional fillval 
)

+

+
+
Writes a 6D array of type real. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_7d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_7d_double (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r8), dimension(:,:,:,:,:,:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
real(r8), intent(in), optional fillval 
)

+

+
+
Writes a 7D array of type double. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_7d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_7d_int (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
integer(i4), dimension(:,:,:,:,:,:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
integer(i4), intent(in), optional fillval 
)

+

+
+
Writes a 7D array of type int. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_7d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_7d_real (type (file_desc_t), intent(inout) File, 
type (var_desc_t), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r4), dimension(:,:,:,:,:,:,:), intent(in) array, 
integer(i4), intent(out) iostat, 
real(r4), intent(in), optional fillval 
)

+

+
+
Writes a 7D array of type real. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_multi_1d_double()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_multi_1d_double (type (file_desc_t), intent(inout) File, 
type (var_desc_t), dimension(:), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r8), dimension(:), intent(in), target array, 
integer(i4), intent(out) iostat, 
real(r8), intent(in), optional, target fillval 
)

+

+
+
Writes a 1D array of type double. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_multi_1d_int()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_multi_1d_int (type (file_desc_t), intent(inout) File, 
type (var_desc_t), dimension(:), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
integer(i4), dimension(:), intent(in), target array, 
integer(i4), intent(out) iostat, 
integer(i4), intent(in), optional, target fillval 
)

+

+
+
Writes a 1D array of type int. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+
+
◆ write_darray_multi_1d_real()

+
+

+

+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
subroutine piodarray::write_darray_multi_1d_real (type (file_desc_t), intent(inout) File, 
type (var_desc_t), dimension(:), intent(inout) varDesc, 
type (io_desc_t), intent(inout) ioDesc, 
real(r4), dimension(:), intent(in), target array, 
integer(i4), intent(out) iostat, 
real(r4), intent(in), optional, target fillval 
)

+

+
+
Writes a 1D array of type real. 

+
Parameters

+  
+    
+    
+    
+    
+    
+    
+  
Filefile_desc_t 
varDescvar_desc_t 
ioDescio_desc_t 
array: The data to be written 
iostat: The status returned from this routine (see PIO_seterrorhandling for details) 
fillval: An optional fill value to fill holes in the data written 

+  

+

+
+

+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group__error__return.html b/docs/group__error__return.html
new file mode 100644
index 00000000000..fc8ec82811e
--- /dev/null
+++ b/docs/group__error__return.html
@@ -0,0 +1,80 @@
+
+
+
+
+
+
+
+PIO: error return codes
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+
error return codes
  

+

+

+
+
: The error return code; ierr != PIO_noerr indicates an error.  
+More...

+
: The error return code; ierr != PIO_noerr indicates an error. 

+
(see PIO_seterrorhandling ) 

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/group__iodesc__generate.html b/docs/group__iodesc__generate.html
new file mode 100644
index 00000000000..c35880f53e6
--- /dev/null
+++ b/docs/group__iodesc__generate.html
@@ -0,0 +1,79 @@
+
+
+
+
+
+
+
+PIO: io descriptors, generating
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+

+
+

+

+
+
+

+
+

+
+

+  

+
io descriptors, generating
  

+

+

+
+
The io descriptor structure in defined in this subroutine and subsequently used in PIO_read_darray, PIO_write_darray, PIO_put_var, PIO_get_var calls (see pio_types).  
+More...

+
The io descriptor structure in defined in this subroutine and subsequently used in PIO_read_darray, PIO_write_darray, PIO_put_var, PIO_get_var calls (see pio_types). 

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/install.html b/docs/install.html
new file mode 100644
index 00000000000..14e8ad3037c
--- /dev/null
+++ b/docs/install.html
@@ -0,0 +1,118 @@
+
+
+
+
+
+
+
+PIO: Installing PIO
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+

+

+  

+
Installing PIO 
  

+

+

+
The PIO code is currently stored on github at https://github.com/PARALLELIO/ParallelIO. For questions about downloading or developing this code, consult the CIME Git Wiki or email jedwa.nosp@m.rds@.nosp@m.ucar..nosp@m.edu.

+
Dependencies

+
PIO can use NetCDF (version 4.3.3+) and/or PnetCDF (version 1.6.1+) for I/O. Ideally, the NetCDF version should be built with MPI, which requires that it be linked with an MPI-enabled version of HDF5. Optionally, NetCDF can be built with DAP support, which introduces a dependency on CURL. Additionally, HDF5, itself, introduces dependencies on LIBZ and (optionally) SZIP.

+
Configuring with CMake

+
To configure the build, PIO requires CMake version 2.8.12+. The typical configuration with CMake can be done as follows:

+
> CC=mpicc FC=mpif90 cmake [-DOPTION1=value1 -DOPTION2=value2 ...] /path/to/pio/source
+
where mpicc and mpif90 are the appropriate MPI-enabled compiler wrappers for your system.

+
The OPTIONS section typically should consist of pointers to the install locations for various dependencies, assuming these dependencies are not located in canonical search locations.

+
For each dependency XXX, one can specify the location of its installation path with the CMake variable XXX_PATH. If the C and Fortran libraries for the dependency are installed in different locations (such as can be done with NetCDF), then you can specify individually XXX_C_PATH and XXX_Fortran_PATH. Hence, you can specify the locations of both NetCDF-C and NetCDF-Fortran, as well as PnetCDF, with the following CMake configuration line:

+
> CC=mpicc FC=mpif90 cmake -DNetCDF_C_PATH=/path/to/netcdf-c \
+           -DNetCDF_Fortran_PATH=/path/to/netcdf-fortran \
+           -DPnetCDF_PATH=/path/to/pnetcdf \
+           /path/to/pio/source
+
This works for the dependencies: NetCDF, PnetCDF, HDF5, LIBZ, SZIP.

+
For specific instructions to install on various commonly used super computers, please read the walk-through guide to PIO Installation.

+
Additional CMake Options

+
Additional configuration options can be specified on the command line.

+
The PIO_ENABLE_TIMING option can be set to ON or OFF to enable or disable the use of GPTL timing in the PIO libraries. This feature requires the GPTL C library for the PIO C library and the GPTL Fortran library with the perf_mod.mod and perf_utils.mod interface modules. If these GPTL libraries are already installed on the system, the user can point PIO to the location of these libraries with the GPTL_PATH variable (or, individually, GPTL_C_PATH and GPTL_Fortran_Perf_PATH variables). However, if these GPTL libraries are not installed on the system, and GPTL cannot be found, then PIO will build its own internal version of GPTL.

+
If PnetCDF is not installed on the system, the user can disable its use by setting -DWITH_PNETCDF=OFF. This will disable the search for PnetCDF on the system and disable the use of PnetCDF from within PIO.

+
If the user wishes to disable the PIO tests, then the user can set the variable -DPIO_ENABLE_TESTS=OFF. This will entirely disable the CTest testing suite, as well as remove all of the test build targets.

+
If you wish to install PIO in a safe location for use later with other software, you may set the CMAKE_INSTALL_PREFIX variable to point to the desired install location.

+
Building

+
Once you have successfully configured PIO with CMake in a build directory. From within the build directory, build PIO with:

+
> make
+
This will build the pioc and piof libraries.

+
Testing

+
If you desire to do testing, and PIO_ENABLE_TESTS=ON (which is the default setting), you may build the test executables with:

+
> make tests
+
Once the tests have been built, you may run tests with:

+
> ctest
+
Note: If you have not run make tests before you run ctest, then you will see all of the tests fail.

+
Alternatively, you may build the test executables and then run tests immediately with:

+
> make check
+
(similar to the typical make check Autotools target).

+
ANOTHER NOTE:* These tests are designed to run in parallel. If you are on one of the supported supercomputing platforms (i.e., NERSC, NWSC, ALCF, etc.), then the ctest command will assume that the tests will be run in an appropriately configured and scheduled parallel job. This can be done by requesting an interactive session from the login nodes and then running ctest from within the interactive terminal. Alternatively, this can be done by running the ctest command from a job submission script. It is important to understand, however, that ctest itself will preface all of the test executable commands with the appropriate mpirun/mpiexec/runjob/etc. Hence, you should not further preface the ctest command with these MPI launchers.

+
Installing

+
Once you have built the PIO libraries, you may install them in the location specified by the CMAKE_INSTALL_PREFIX. To do this, simply type:

+
> make install
+
If the internal GPTL libraries were built (because GPTL could not be found and the PIO_ENABLE_TIMING variable is set to ON), then these libraries will be installed with PIO.

+
Examples

+
From within the build directory, build the PIO examples with:

+
> make examples
+
This will build the C and Fortran examples in under the examples subdirectory. 

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepiodarray_1_1_p_i_oc__read__darray-members.html b/docs/interfacepiodarray_1_1_p_i_oc__read__darray-members.html
new file mode 100644
index 00000000000..1f34bdf226e
--- /dev/null
+++ b/docs/interfacepiodarray_1_1_p_i_oc__read__darray-members.html
@@ -0,0 +1,82 @@
+
+
+
+
+
+
+
+PIO: Member List
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+
piodarray::PIOc_read_darray Member List
  

+

+

+
+
This is the complete list of members for piodarray::PIOc_read_darray, including all inherited members.

+
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepiodarray_1_1_p_i_oc__read__darray.html b/docs/interfacepiodarray_1_1_p_i_oc__read__darray.html
new file mode 100644
index 00000000000..fb305db755d
--- /dev/null
+++ b/docs/interfacepiodarray_1_1_p_i_oc__read__darray.html
@@ -0,0 +1,84 @@
+
+
+
+
+
+
+
+PIO: piodarray::PIOc_read_darray Interface Reference
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+List of all members  

+  

+
piodarray::PIOc_read_darray Interface Reference
  

+

+

+
The documentation for this interface was generated from the following file:
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepiodarray_1_1_p_i_oc__write__darray__multi-members.html b/docs/interfacepiodarray_1_1_p_i_oc__write__darray__multi-members.html
new file mode 100644
index 00000000000..092b515e190
--- /dev/null
+++ b/docs/interfacepiodarray_1_1_p_i_oc__write__darray__multi-members.html
@@ -0,0 +1,82 @@
+
+
+
+
+
+
+
+PIO: Member List
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+
piodarray::PIOc_write_darray_multi Member List
  

+

+

+
+
This is the complete list of members for piodarray::PIOc_write_darray_multi, including all inherited members.

+
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepiodarray_1_1_p_i_oc__write__darray__multi.html b/docs/interfacepiodarray_1_1_p_i_oc__write__darray__multi.html
new file mode 100644
index 00000000000..fa46246a548
--- /dev/null
+++ b/docs/interfacepiodarray_1_1_p_i_oc__write__darray__multi.html
@@ -0,0 +1,84 @@
+
+
+
+
+
+
+
+PIO: piodarray::PIOc_write_darray_multi Interface Reference
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+List of all members  

+  

+
piodarray::PIOc_write_darray_multi Interface Reference
  

+

+

+
The documentation for this interface was generated from the following file:
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__double-members.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__double-members.html
new file mode 100644
index 00000000000..e6e164eefcb
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__double-members.html
@@ -0,0 +1,83 @@
+
+
+
+
+
+
+
+PIO: Member List
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+
pionfatt_mod::PIOc_get_att_double Member List
  

+

+

+
+
This is the complete list of members for pionfatt_mod::PIOc_get_att_double, including all inherited members.

+
+  
+
pioc_get_att_double(ncid, varid, name, op) (defined in pionfatt_mod::PIOc_get_att_double)pionfatt_mod::PIOc_get_att_double

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__double.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__double.html
new file mode 100644
index 00000000000..7d48be6bc61
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__double.html
@@ -0,0 +1,92 @@
+
+
+
+
+
+
+
+PIO: pionfatt_mod::PIOc_get_att_double Interface Reference
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+List of all members |
+Public Member Functions  

+  

+
pionfatt_mod::PIOc_get_att_double Interface Reference
  

+

+

+
+
+
+
+

+Public Member Functions

+integer(c_int) function pioc_get_att_double (ncid, varid, name, op)
 

+
The documentation for this interface was generated from the following file:
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__float-members.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__float-members.html
new file mode 100644
index 00000000000..405045b359c
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__float-members.html
@@ -0,0 +1,83 @@
+
+
+
+
+
+
+
+PIO: Member List
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+
pionfatt_mod::PIOc_get_att_float Member List
  

+

+

+
+
This is the complete list of members for pionfatt_mod::PIOc_get_att_float, including all inherited members.

+
+  
+
pioc_get_att_float(ncid, varid, name, op) (defined in pionfatt_mod::PIOc_get_att_float)pionfatt_mod::PIOc_get_att_float

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__float.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__float.html
new file mode 100644
index 00000000000..ec73935fd4a
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__float.html
@@ -0,0 +1,92 @@
+
+
+
+
+
+
+
+PIO: pionfatt_mod::PIOc_get_att_float Interface Reference
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+List of all members |
+Public Member Functions  

+  

+
pionfatt_mod::PIOc_get_att_float Interface Reference
  

+

+

+
+
+
+
+

+Public Member Functions

+integer(c_int) function pioc_get_att_float (ncid, varid, name, op)
 

+
The documentation for this interface was generated from the following file:
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__int-members.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__int-members.html
new file mode 100644
index 00000000000..70cc83201d8
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__int-members.html
@@ -0,0 +1,83 @@
+
+
+
+
+
+
+
+PIO: Member List
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+
pionfatt_mod::PIOc_get_att_int Member List
  

+

+

+
+
This is the complete list of members for pionfatt_mod::PIOc_get_att_int, including all inherited members.

+
+  
+
pioc_get_att_int(ncid, varid, name, op) (defined in pionfatt_mod::PIOc_get_att_int)pionfatt_mod::PIOc_get_att_int

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__int.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__int.html
new file mode 100644
index 00000000000..826c11fd172
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__int.html
@@ -0,0 +1,92 @@
+
+
+
+
+
+
+
+PIO: pionfatt_mod::PIOc_get_att_int Interface Reference
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+List of all members |
+Public Member Functions  

+  

+
pionfatt_mod::PIOc_get_att_int Interface Reference
  

+

+

+
+
+
+
+

+Public Member Functions

+integer(c_int) function pioc_get_att_int (ncid, varid, name, op)
 

+
The documentation for this interface was generated from the following file:
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__text-members.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__text-members.html
new file mode 100644
index 00000000000..27ad091e257
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__text-members.html
@@ -0,0 +1,83 @@
+
+
+
+
+
+
+
+PIO: Member List
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+
pionfatt_mod::PIOc_get_att_text Member List
  

+

+

+
+
This is the complete list of members for pionfatt_mod::PIOc_get_att_text, including all inherited members.

+
+  
+
pioc_get_att_text(ncid, varid, name, op) (defined in pionfatt_mod::PIOc_get_att_text)pionfatt_mod::PIOc_get_att_text

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__text.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__text.html
new file mode 100644
index 00000000000..acdddc235dd
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__get__att__text.html
@@ -0,0 +1,92 @@
+
+
+
+
+
+
+
+PIO: pionfatt_mod::PIOc_get_att_text Interface Reference
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+List of all members |
+Public Member Functions  

+  

+
pionfatt_mod::PIOc_get_att_text Interface Reference
  

+

+

+
+
+
+
+

+Public Member Functions

+integer(c_int) function pioc_get_att_text (ncid, varid, name, op)
 

+
The documentation for this interface was generated from the following file:
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__double-members.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__double-members.html
new file mode 100644
index 00000000000..ae52859384e
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__double-members.html
@@ -0,0 +1,83 @@
+
+
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+
+
+
+
+PIO: Member List
+
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+
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+
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+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+
pionfatt_mod::PIOc_put_att_double Member List
  

+

+

+
+
This is the complete list of members for pionfatt_mod::PIOc_put_att_double, including all inherited members.

+
+  
+
pioc_put_att_double(ncid, varid, name, xtype, len, op) (defined in pionfatt_mod::PIOc_put_att_double)pionfatt_mod::PIOc_put_att_double

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__double.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__double.html
new file mode 100644
index 00000000000..66b04dd3455
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__double.html
@@ -0,0 +1,92 @@
+
+
+
+
+
+
+
+PIO: pionfatt_mod::PIOc_put_att_double Interface Reference
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+List of all members |
+Public Member Functions  

+  

+
pionfatt_mod::PIOc_put_att_double Interface Reference
  

+

+

+
+
+
+
+

+Public Member Functions

+integer(c_int) function pioc_put_att_double (ncid, varid, name, xtype, len, op)
 

+
The documentation for this interface was generated from the following file:
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__float-members.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__float-members.html
new file mode 100644
index 00000000000..17535f81a98
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__float-members.html
@@ -0,0 +1,83 @@
+
+
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+
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+
+
+PIO: Member List
+
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+
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+

+

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+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+
pionfatt_mod::PIOc_put_att_float Member List
  

+

+

+
+
This is the complete list of members for pionfatt_mod::PIOc_put_att_float, including all inherited members.

+
+  
+
pioc_put_att_float(ncid, varid, name, xtype, len, op) (defined in pionfatt_mod::PIOc_put_att_float)pionfatt_mod::PIOc_put_att_float

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__float.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__float.html
new file mode 100644
index 00000000000..5751eb72883
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__float.html
@@ -0,0 +1,92 @@
+
+
+
+
+
+
+
+PIO: pionfatt_mod::PIOc_put_att_float Interface Reference
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+List of all members |
+Public Member Functions  

+  

+
pionfatt_mod::PIOc_put_att_float Interface Reference
  

+

+

+
+
+
+
+

+Public Member Functions

+integer(c_int) function pioc_put_att_float (ncid, varid, name, xtype, len, op)
 

+
The documentation for this interface was generated from the following file:
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__int-members.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__int-members.html
new file mode 100644
index 00000000000..1e3a81bc7d7
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__int-members.html
@@ -0,0 +1,83 @@
+
+
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+PIO: Member List
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+

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+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+
pionfatt_mod::PIOc_put_att_int Member List
  

+

+

+
+
This is the complete list of members for pionfatt_mod::PIOc_put_att_int, including all inherited members.

+
+  
+
pioc_put_att_int(ncid, varid, name, xtype, len, op) (defined in pionfatt_mod::PIOc_put_att_int)pionfatt_mod::PIOc_put_att_int

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__int.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__int.html
new file mode 100644
index 00000000000..7d934bbe398
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__int.html
@@ -0,0 +1,92 @@
+
+
+
+
+
+
+
+PIO: pionfatt_mod::PIOc_put_att_int Interface Reference
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+List of all members |
+Public Member Functions  

+  

+
pionfatt_mod::PIOc_put_att_int Interface Reference
  

+

+

+
+
+
+
+

+Public Member Functions

+integer(c_int) function pioc_put_att_int (ncid, varid, name, xtype, len, op)
 

+
The documentation for this interface was generated from the following file:
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__text-members.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__text-members.html
new file mode 100644
index 00000000000..d6165f43dbe
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__text-members.html
@@ -0,0 +1,83 @@
+
+
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+
+
+PIO: Member List
+
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+
+
+
+
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+

+

+
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+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+
pionfatt_mod::PIOc_put_att_text Member List
  

+

+

+
+
This is the complete list of members for pionfatt_mod::PIOc_put_att_text, including all inherited members.

+
+  
+
pioc_put_att_text(ncid, varid, name, len, op) (defined in pionfatt_mod::PIOc_put_att_text)pionfatt_mod::PIOc_put_att_text

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__text.html b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__text.html
new file mode 100644
index 00000000000..bf6bead70f6
--- /dev/null
+++ b/docs/interfacepionfatt__mod_1_1_p_i_oc__put__att__text.html
@@ -0,0 +1,97 @@
+
+
+
+
+
+
+
+PIO: pionfatt_mod::PIOc_put_att_text Interface Reference
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+List of all members |
+Public Member Functions  

+  

+
pionfatt_mod::PIOc_put_att_text Interface Reference
  

+

+

+
+
Write a netCDF text attribute.  
+ More...

+
+
+
+
+

+Public Member Functions

+integer(c_int) function pioc_put_att_text (ncid, varid, name, len, op)
 

+
Detailed Description

+
Write a netCDF text attribute. 

+
The documentation for this interface was generated from the following file:
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__double-members.html b/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__double-members.html
new file mode 100644
index 00000000000..a9ccdbca493
--- /dev/null
+++ b/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__double-members.html
@@ -0,0 +1,82 @@
+
+
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+
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+
+
+PIO: Member List
+
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+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+
pionfget_mod::PIOc_get_var_double Member List
  

+

+

+
+
This is the complete list of members for pionfget_mod::PIOc_get_var_double, including all inherited members.

+
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__double.html b/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__double.html
new file mode 100644
index 00000000000..3f9f281a967
--- /dev/null
+++ b/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__double.html
@@ -0,0 +1,84 @@
+
+
+
+
+
+
+
+PIO: pionfget_mod::PIOc_get_var_double Interface Reference
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+List of all members  

+  

+
pionfget_mod::PIOc_get_var_double Interface Reference
  

+

+

+
The documentation for this interface was generated from the following file:
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__float-members.html b/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__float-members.html
new file mode 100644
index 00000000000..4013867e1fa
--- /dev/null
+++ b/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__float-members.html
@@ -0,0 +1,82 @@
+
+
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+PIO: Member List
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+

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+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+
pionfget_mod::PIOc_get_var_float Member List
  

+

+

+
+
This is the complete list of members for pionfget_mod::PIOc_get_var_float, including all inherited members.

+
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__float.html b/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__float.html
new file mode 100644
index 00000000000..352b39c0e63
--- /dev/null
+++ b/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__float.html
@@ -0,0 +1,84 @@
+
+
+
+
+
+
+
+PIO: pionfget_mod::PIOc_get_var_float Interface Reference
+
+
+
+
+
+
+
+
+
+
+

+

+
+ 
+ 
+  
+ 
+ 
+

+   
PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
+
+

+
+

+
+
+

+

+  

+List of all members  

+  

+
pionfget_mod::PIOc_get_var_float Interface Reference
  

+

+

+
The documentation for this interface was generated from the following file:
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__int-members.html b/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__int-members.html
new file mode 100644
index 00000000000..db9322a8b0e
--- /dev/null
+++ b/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__int-members.html
@@ -0,0 +1,82 @@
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+PIO: Member List
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PIO
+    2.4.0
+   

+  

+

+
+
+
+
+
+
+
+
+

+

+
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+

+
+

+
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+

+

+  

+
pionfget_mod::PIOc_get_var_int Member List
  

+

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+
+
This is the complete list of members for pionfget_mod::PIOc_get_var_int, including all inherited members.

+
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
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+
+
diff --git a/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__int.html b/docs/interfacepionfget__mod_1_1_p_i_oc__get__var__int.html
new file mode 100644
index 00000000000..cc25d9b2898
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+PIO: pionfget_mod::PIOc_get_var_int Interface Reference
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diff --git a/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__double-members.html b/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__double-members.html
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+

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diff --git a/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__double.html b/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__double.html
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@@ -0,0 +1,84 @@
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+PIO: pionfget_mod::PIOc_get_vara_double Interface Reference
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+   
PIO
+    2.4.0
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+  

+

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+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
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diff --git a/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__float-members.html b/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__float-members.html
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--- /dev/null
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+

+
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diff --git a/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__float.html b/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__float.html
new file mode 100644
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--- /dev/null
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@@ -0,0 +1,84 @@
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+PIO: pionfget_mod::PIOc_get_vara_float Interface Reference
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+   
PIO
+    2.4.0
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+  

+

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+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
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diff --git a/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__int-members.html b/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__int-members.html
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--- /dev/null
+++ b/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__int-members.html
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+  

+

+
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diff --git a/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__int.html b/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__int.html
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@@ -0,0 +1,84 @@
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+PIO: pionfget_mod::PIOc_get_vara_int Interface Reference
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PIO
+    2.4.0
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+  

+

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pionfget_mod::PIOc_get_vara_int Interface Reference
  

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+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
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diff --git a/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__text-members.html b/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__text-members.html
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+    2.4.0
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+  

+

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diff --git a/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__text.html b/docs/interfacepionfget__mod_1_1_p_i_oc__get__vara__text.html
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@@ -0,0 +1,84 @@
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+PIO: pionfget_mod::PIOc_get_vara_text Interface Reference
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+   
PIO
+    2.4.0
+   

+  

+

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+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
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diff --git a/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__double-members.html b/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__double-members.html
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--- /dev/null
+++ b/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__double-members.html
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+    2.4.0
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+  

+

+
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diff --git a/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__double.html b/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__double.html
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--- /dev/null
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@@ -0,0 +1,84 @@
+
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+PIO: pionfput_mod::PIOc_put_vara_double Interface Reference
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+

+   
PIO
+    2.4.0
+   

+  

+

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+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
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diff --git a/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__float-members.html b/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__float-members.html
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index 00000000000..5bda4ae2554
--- /dev/null
+++ b/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__float-members.html
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diff --git a/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__float.html b/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__float.html
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--- /dev/null
+++ b/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__float.html
@@ -0,0 +1,84 @@
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+PIO: pionfput_mod::PIOc_put_vara_float Interface Reference
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+   
PIO
+    2.4.0
+   

+  

+

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+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
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diff --git a/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__int-members.html b/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__int-members.html
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--- /dev/null
+++ b/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__int-members.html
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+

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diff --git a/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__int.html b/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__int.html
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--- /dev/null
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@@ -0,0 +1,84 @@
+
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+PIO: pionfput_mod::PIOc_put_vara_int Interface Reference
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+   
PIO
+    2.4.0
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+  

+

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+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
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diff --git a/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__text-members.html b/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__text-members.html
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--- /dev/null
+++ b/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__text-members.html
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diff --git a/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__text.html b/docs/interfacepionfput__mod_1_1_p_i_oc__put__vara__text.html
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@@ -0,0 +1,84 @@
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+PIO: pionfput_mod::PIOc_put_vara_text Interface Reference
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+

+   
PIO
+    2.4.0
+   

+  

+

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The documentation for this interface was generated from the following file:
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diff --git a/docs/intro.html b/docs/intro.html
new file mode 100644
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--- /dev/null
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+PIO: Introduction
+
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+

+

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+  
+ 
+ 
+

+   
PIO
+    2.4.0
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+  

+
Introduction 
  

+

+

+
PIO is a software interface layer designed to encapsolate the complexities of parallel IO and make it easier to replace the lower level software backend. It currently supports netcdf  and pnetcdf .

+
Basic description of how to optimize IO in a parallel environment...

+
PIO calls are collective. A MPI communicator is set in a call to PIO_init and all tasks associated with that communicator must participate in all subsequent calls to PIO. An application can make multiple calls to PIO_init in order to support multiple MPI communicators.

+
Begin by checking out a copy from gitHub and installing on your system as per the instructions in the Installation document. Take a look at examples of PIO usage in both complex and simple test programs in the Examples document. Finally, read through the FAQ to see if any remaining questions can be answered.

+
Using PIO has three basic steps.

+
    
+
  1. Your program should call the PIO_init function, and provide the MPI communicator (and the rank within that communicator) of the calling task. This call initializes an IO system type structure that will be used in subsequent file and decomposition functions.
    2. 
+
  2. You can open a file for reading or writing with a call to PIO_createfile or PIO_openfile. In this call you will specify the file type: pio_iotype_netcdf, pio_iotype_pnetcdf, pio_iotype_netcdf4c or pio_iotype_netcdf4p; along with the file name and optionally the netcdf mode.
    3. 
+
  3. Finally, you can read or write decomposed data to the output file. You must describe the mapping between the organization of data in the file and that same data in the application space. This is done in a call to PIO_initdecomp. In the simplest call to this function, a one dimensional integer array is passed from each task, the values in the array represent the offset from the beginning of the array on file. (what happens next?) 
    4. 
+

+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/jquery.js b/docs/jquery.js
new file mode 100644
index 00000000000..f5343eda922
--- /dev/null
+++ b/docs/jquery.js
@@ -0,0 +1,87 @@
+/*!
+ * jQuery JavaScript Library v1.7.1
+ * http://jquery.com/
+ *
+ * Copyright 2011, John Resig
+ * Dual licensed under the MIT or GPL Version 2 licenses.
+ * http://jquery.org/license
+ *
+ * Includes Sizzle.js
+ * http://sizzlejs.com/
+ * Copyright 2011, The Dojo Foundation
+ * Released under the MIT, BSD, and GPL Licenses.
+ *
+ * Date: Mon Nov 21 21:11:03 2011 -0500
+ */
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+ * http://jquery.org/license
+ *
+ * http://docs.jquery.com/UI
+ */
+(function(a,d){a.ui=a.ui||{};if(a.ui.version){return}a.extend(a.ui,{version:"1.8.18",keyCode:{ALT:18,BACKSPACE:8,CAPS_LOCK:20,COMMA:188,COMMAND:91,COMMAND_LEFT:91,COMMAND_RIGHT:93,CONTROL:17,DELETE:46,DOWN:40,END:35,ENTER:13,ESCAPE:27,HOME:36,INSERT:45,LEFT:37,MENU:93,NUMPAD_ADD:107,NUMPAD_DECIMAL:110,NUMPAD_DIVIDE:111,NUMPAD_ENTER:108,NUMPAD_MULTIPLY:106,NUMPAD_SUBTRACT:109,PAGE_DOWN:34,PAGE_UP:33,PERIOD:190,RIGHT:39,SHIFT:16,SPACE:32,TAB:9,UP:38,WINDOWS:91}});a.fn.extend({propAttr:a.fn.prop||a.fn.attr,_focus:a.fn.focus,focus:function(e,f){return typeof e==="number"?this.each(function(){var g=this;setTimeout(function(){a(g).focus();if(f){f.call(g)}},e)}):this._focus.apply(this,arguments)},scrollParent:function(){var e;if((a.browser.msie&&(/(static|relative)/).test(this.css("position")))||(/absolute/).test(this.css("position"))){e=this.parents().filter(function(){return(/(relative|absolute|fixed)/).test(a.curCSS(this,"position",1))&&(/(auto|scroll)/).test(a.curCSS(this,"overflow",1)+a.curCSS(this,"overflow-y",1)+a.curCSS(this,"overflow-x",1))}).eq(0)}else{e=this.parents().filter(function(){return(/(auto|scroll)/).test(a.curCSS(this,"overflow",1)+a.curCSS(this,"overflow-y",1)+a.curCSS(this,"overflow-x",1))}).eq(0)}return(/fixed/).test(this.css("position"))||!e.length?a(document):e},zIndex:function(h){if(h!==d){return this.css("zIndex",h)}if(this.length){var f=a(this[0]),e,g;while(f.length&&f[0]!==document){e=f.css("position");if(e==="absolute"||e==="relative"||e==="fixed"){g=parseInt(f.css("zIndex"),10);if(!isNaN(g)&&g!==0){return g}}f=f.parent()}}return 0},disableSelection:function(){return this.bind((a.support.selectstart?"selectstart":"mousedown")+".ui-disableSelection",function(e){e.preventDefault()})},enableSelection:function(){return this.unbind(".ui-disableSelection")}});a.each(["Width","Height"],function(g,e){var f=e==="Width"?["Left","Right"]:["Top","Bottom"],h=e.toLowerCase(),k={innerWidth:a.fn.innerWidth,innerHeight:a.fn.innerHeight,outerWidth:a.fn.outerWidth,outerHeight:a.fn.outerHeight};function j(m,l,i,n){a.each(f,function(){l-=parseFloat(a.curCSS(m,"padding"+this,true))||0;if(i){l-=parseFloat(a.curCSS(m,"border"+this+"Width",true))||0}if(n){l-=parseFloat(a.curCSS(m,"margin"+this,true))||0}});return l}a.fn["inner"+e]=function(i){if(i===d){return k["inner"+e].call(this)}return this.each(function(){a(this).css(h,j(this,i)+"px")})};a.fn["outer"+e]=function(i,l){if(typeof i!=="number"){return k["outer"+e].call(this,i)}return this.each(function(){a(this).css(h,j(this,i,true,l)+"px")})}});function c(g,e){var j=g.nodeName.toLowerCase();if("area"===j){var i=g.parentNode,h=i.name,f;if(!g.href||!h||i.nodeName.toLowerCase()!=="map"){return false}f=a("img[usemap=#"+h+"]")[0];return !!f&&b(f)}return(/input|select|textarea|button|object/.test(j)?!g.disabled:"a"==j?g.href||e:e)&&b(g)}function b(e){return !a(e).parents().andSelf().filter(function(){return a.curCSS(this,"visibility")==="hidden"||a.expr.filters.hidden(this)}).length}a.extend(a.expr[":"],{data:function(g,f,e){return !!a.data(g,e[3])},focusable:function(e){return c(e,!isNaN(a.attr(e,"tabindex")))},tabbable:function(g){var e=a.attr(g,"tabindex"),f=isNaN(e);return(f||e>=0)&&c(g,!f)}});a(function(){var e=document.body,f=e.appendChild(f=document.createElement("div"));f.offsetHeight;a.extend(f.style,{minHeight:"100px",height:"auto",padding:0,borderWidth:0});a.support.minHeight=f.offsetHeight===100;a.support.selectstart="onselectstart" in f;e.removeChild(f).style.display="none"});a.extend(a.ui,{plugin:{add:function(f,g,j){var h=a.ui[f].prototype;for(var e in j){h.plugins[e]=h.plugins[e]||[];h.plugins[e].push([g,j[e]])}},call:function(e,g,f){var j=e.plugins[g];if(!j||!e.element[0].parentNode){return}for(var h=0;h0){return true}h[e]=1;g=(h[e]>0);h[e]=0;return g},isOverAxis:function(f,e,g){return(f>e)&&(f<(e+g))},isOver:function(j,f,i,h,e,g){return a.ui.isOverAxis(j,i,e)&&a.ui.isOverAxis(f,h,g)}})})(jQuery);/*!
+ * jQuery UI Widget 1.8.18
+ *
+ * Copyright 2011, AUTHORS.txt (http://jqueryui.com/about)
+ * Dual licensed under the MIT or GPL Version 2 licenses.
+ * http://jquery.org/license
+ *
+ * http://docs.jquery.com/UI/Widget
+ */
+(function(b,d){if(b.cleanData){var c=b.cleanData;b.cleanData=function(f){for(var g=0,h;(h=f[g])!=null;g++){try{b(h).triggerHandler("remove")}catch(j){}}c(f)}}else{var a=b.fn.remove;b.fn.remove=function(e,f){return this.each(function(){if(!f){if(!e||b.filter(e,[this]).length){b("*",this).add([this]).each(function(){try{b(this).triggerHandler("remove")}catch(g){}})}}return a.call(b(this),e,f)})}}b.widget=function(f,h,e){var g=f.split(".")[0],j;f=f.split(".")[1];j=g+"-"+f;if(!e){e=h;h=b.Widget}b.expr[":"][j]=function(k){return !!b.data(k,f)};b[g]=b[g]||{};b[g][f]=function(k,l){if(arguments.length){this._createWidget(k,l)}};var i=new h();i.options=b.extend(true,{},i.options);b[g][f].prototype=b.extend(true,i,{namespace:g,widgetName:f,widgetEventPrefix:b[g][f].prototype.widgetEventPrefix||f,widgetBaseClass:j},e);b.widget.bridge(f,b[g][f])};b.widget.bridge=function(f,e){b.fn[f]=function(i){var g=typeof i==="string",h=Array.prototype.slice.call(arguments,1),j=this;i=!g&&h.length?b.extend.apply(null,[true,i].concat(h)):i;if(g&&i.charAt(0)==="_"){return j}if(g){this.each(function(){var k=b.data(this,f),l=k&&b.isFunction(k[i])?k[i].apply(k,h):k;if(l!==k&&l!==d){j=l;return false}})}else{this.each(function(){var k=b.data(this,f);if(k){k.option(i||{})._init()}else{b.data(this,f,new e(i,this))}})}return j}};b.Widget=function(e,f){if(arguments.length){this._createWidget(e,f)}};b.Widget.prototype={widgetName:"widget",widgetEventPrefix:"",options:{disabled:false},_createWidget:function(f,g){b.data(g,this.widgetName,this);this.element=b(g);this.options=b.extend(true,{},this.options,this._getCreateOptions(),f);var e=this;this.element.bind("remove."+this.widgetName,function(){e.destroy()});this._create();this._trigger("create");this._init()},_getCreateOptions:function(){return b.metadata&&b.metadata.get(this.element[0])[this.widgetName]},_create:function(){},_init:function(){},destroy:function(){this.element.unbind("."+this.widgetName).removeData(this.widgetName);this.widget().unbind("."+this.widgetName).removeAttr("aria-disabled").removeClass(this.widgetBaseClass+"-disabled ui-state-disabled")},widget:function(){return this.element},option:function(f,g){var e=f;if(arguments.length===0){return b.extend({},this.options)}if(typeof f==="string"){if(g===d){return this.options[f]}e={};e[f]=g}this._setOptions(e);return this},_setOptions:function(f){var e=this;b.each(f,function(g,h){e._setOption(g,h)});return this},_setOption:function(e,f){this.options[e]=f;if(e==="disabled"){this.widget()[f?"addClass":"removeClass"](this.widgetBaseClass+"-disabled ui-state-disabled").attr("aria-disabled",f)}return this},enable:function(){return this._setOption("disabled",false)},disable:function(){return this._setOption("disabled",true)},_trigger:function(e,f,g){var j,i,h=this.options[e];g=g||{};f=b.Event(f);f.type=(e===this.widgetEventPrefix?e:this.widgetEventPrefix+e).toLowerCase();f.target=this.element[0];i=f.originalEvent;if(i){for(j in i){if(!(j in f)){f[j]=i[j]}}}this.element.trigger(f,g);return !(b.isFunction(h)&&h.call(this.element[0],f,g)===false||f.isDefaultPrevented())}}})(jQuery);/*!
+ * jQuery UI Mouse 1.8.18
+ *
+ * Copyright 2011, AUTHORS.txt (http://jqueryui.com/about)
+ * Dual licensed under the MIT or GPL Version 2 licenses.
+ * http://jquery.org/license
+ *
+ * http://docs.jquery.com/UI/Mouse
+ *
+ * Depends:
+ *	jquery.ui.widget.js
+ */
+(function(b,c){var a=false;b(document).mouseup(function(d){a=false});b.widget("ui.mouse",{options:{cancel:":input,option",distance:1,delay:0},_mouseInit:function(){var d=this;this.element.bind("mousedown."+this.widgetName,function(e){return d._mouseDown(e)}).bind("click."+this.widgetName,function(e){if(true===b.data(e.target,d.widgetName+".preventClickEvent")){b.removeData(e.target,d.widgetName+".preventClickEvent");e.stopImmediatePropagation();return false}});this.started=false},_mouseDestroy:function(){this.element.unbind("."+this.widgetName)},_mouseDown:function(f){if(a){return}(this._mouseStarted&&this._mouseUp(f));this._mouseDownEvent=f;var e=this,g=(f.which==1),d=(typeof this.options.cancel=="string"&&f.target.nodeName?b(f.target).closest(this.options.cancel).length:false);if(!g||d||!this._mouseCapture(f)){return true}this.mouseDelayMet=!this.options.delay;if(!this.mouseDelayMet){this._mouseDelayTimer=setTimeout(function(){e.mouseDelayMet=true},this.options.delay)}if(this._mouseDistanceMet(f)&&this._mouseDelayMet(f)){this._mouseStarted=(this._mouseStart(f)!==false);if(!this._mouseStarted){f.preventDefault();return true}}if(true===b.data(f.target,this.widgetName+".preventClickEvent")){b.removeData(f.target,this.widgetName+".preventClickEvent")}this._mouseMoveDelegate=function(h){return e._mouseMove(h)};this._mouseUpDelegate=function(h){return e._mouseUp(h)};b(document).bind("mousemove."+this.widgetName,this._mouseMoveDelegate).bind("mouseup."+this.widgetName,this._mouseUpDelegate);f.preventDefault();a=true;return true},_mouseMove:function(d){if(b.browser.msie&&!(document.documentMode>=9)&&!d.button){return this._mouseUp(d)}if(this._mouseStarted){this._mouseDrag(d);return d.preventDefault()}if(this._mouseDistanceMet(d)&&this._mouseDelayMet(d)){this._mouseStarted=(this._mouseStart(this._mouseDownEvent,d)!==false);(this._mouseStarted?this._mouseDrag(d):this._mouseUp(d))}return !this._mouseStarted},_mouseUp:function(d){b(document).unbind("mousemove."+this.widgetName,this._mouseMoveDelegate).unbind("mouseup."+this.widgetName,this._mouseUpDelegate);if(this._mouseStarted){this._mouseStarted=false;if(d.target==this._mouseDownEvent.target){b.data(d.target,this.widgetName+".preventClickEvent",true)}this._mouseStop(d)}return false},_mouseDistanceMet:function(d){return(Math.max(Math.abs(this._mouseDownEvent.pageX-d.pageX),Math.abs(this._mouseDownEvent.pageY-d.pageY))>=this.options.distance)},_mouseDelayMet:function(d){return this.mouseDelayMet},_mouseStart:function(d){},_mouseDrag:function(d){},_mouseStop:function(d){},_mouseCapture:function(d){return true}})})(jQuery);(function(c,d){c.widget("ui.resizable",c.ui.mouse,{widgetEventPrefix:"resize",options:{alsoResize:false,animate:false,animateDuration:"slow",animateEasing:"swing",aspectRatio:false,autoHide:false,containment:false,ghost:false,grid:false,handles:"e,s,se",helper:false,maxHeight:null,maxWidth:null,minHeight:10,minWidth:10,zIndex:1000},_create:function(){var f=this,k=this.options;this.element.addClass("ui-resizable");c.extend(this,{_aspectRatio:!!(k.aspectRatio),aspectRatio:k.aspectRatio,originalElement:this.element,_proportionallyResizeElements:[],_helper:k.helper||k.ghost||k.animate?k.helper||"ui-resizable-helper":null});if(this.element[0].nodeName.match(/canvas|textarea|input|select|button|img/i)){this.element.wrap(c('
').css({position:this.element.css("position"),width:this.element.outerWidth(),height:this.element.outerHeight(),top:this.element.css("top"),left:this.element.css("left")}));this.element=this.element.parent().data("resizable",this.element.data("resizable"));this.elementIsWrapper=true;this.element.css({marginLeft:this.originalElement.css("marginLeft"),marginTop:this.originalElement.css("marginTop"),marginRight:this.originalElement.css("marginRight"),marginBottom:this.originalElement.css("marginBottom")});this.originalElement.css({marginLeft:0,marginTop:0,marginRight:0,marginBottom:0});this.originalResizeStyle=this.originalElement.css("resize");this.originalElement.css("resize","none");this._proportionallyResizeElements.push(this.originalElement.css({position:"static",zoom:1,display:"block"}));this.originalElement.css({margin:this.originalElement.css("margin")});this._proportionallyResize()}this.handles=k.handles||(!c(".ui-resizable-handle",this.element).length?"e,s,se":{n:".ui-resizable-n",e:".ui-resizable-e",s:".ui-resizable-s",w:".ui-resizable-w",se:".ui-resizable-se",sw:".ui-resizable-sw",ne:".ui-resizable-ne",nw:".ui-resizable-nw"});if(this.handles.constructor==String){if(this.handles=="all"){this.handles="n,e,s,w,se,sw,ne,nw"}var l=this.handles.split(",");this.handles={};for(var g=0;g
');if(/sw|se|ne|nw/.test(j)){h.css({zIndex:++k.zIndex})}if("se"==j){h.addClass("ui-icon ui-icon-gripsmall-diagonal-se")}this.handles[j]=".ui-resizable-"+j;this.element.append(h)}}this._renderAxis=function(q){q=q||this.element;for(var n in this.handles){if(this.handles[n].constructor==String){this.handles[n]=c(this.handles[n],this.element).show()}if(this.elementIsWrapper&&this.originalElement[0].nodeName.match(/textarea|input|select|button/i)){var o=c(this.handles[n],this.element),p=0;p=/sw|ne|nw|se|n|s/.test(n)?o.outerHeight():o.outerWidth();var m=["padding",/ne|nw|n/.test(n)?"Top":/se|sw|s/.test(n)?"Bottom":/^e$/.test(n)?"Right":"Left"].join("");q.css(m,p);this._proportionallyResize()}if(!c(this.handles[n]).length){continue}}};this._renderAxis(this.element);this._handles=c(".ui-resizable-handle",this.element).disableSelection();this._handles.mouseover(function(){if(!f.resizing){if(this.className){var i=this.className.match(/ui-resizable-(se|sw|ne|nw|n|e|s|w)/i)}f.axis=i&&i[1]?i[1]:"se"}});if(k.autoHide){this._handles.hide();c(this.element).addClass("ui-resizable-autohide").hover(function(){if(k.disabled){return}c(this).removeClass("ui-resizable-autohide");f._handles.show()},function(){if(k.disabled){return}if(!f.resizing){c(this).addClass("ui-resizable-autohide");f._handles.hide()}})}this._mouseInit()},destroy:function(){this._mouseDestroy();var e=function(g){c(g).removeClass("ui-resizable ui-resizable-disabled ui-resizable-resizing").removeData("resizable").unbind(".resizable").find(".ui-resizable-handle").remove()};if(this.elementIsWrapper){e(this.element);var f=this.element;f.after(this.originalElement.css({position:f.css("position"),width:f.outerWidth(),height:f.outerHeight(),top:f.css("top"),left:f.css("left")})).remove()}this.originalElement.css("resize",this.originalResizeStyle);e(this.originalElement);return this},_mouseCapture:function(f){var g=false;for(var e in this.handles){if(c(this.handles[e])[0]==f.target){g=true}}return !this.options.disabled&&g},_mouseStart:function(g){var j=this.options,f=this.element.position(),e=this.element;this.resizing=true;this.documentScroll={top:c(document).scrollTop(),left:c(document).scrollLeft()};if(e.is(".ui-draggable")||(/absolute/).test(e.css("position"))){e.css({position:"absolute",top:f.top,left:f.left})}this._renderProxy();var k=b(this.helper.css("left")),h=b(this.helper.css("top"));if(j.containment){k+=c(j.containment).scrollLeft()||0;h+=c(j.containment).scrollTop()||0}this.offset=this.helper.offset();this.position={left:k,top:h};this.size=this._helper?{width:e.outerWidth(),height:e.outerHeight()}:{width:e.width(),height:e.height()};this.originalSize=this._helper?{width:e.outerWidth(),height:e.outerHeight()}:{width:e.width(),height:e.height()};this.originalPosition={left:k,top:h};this.sizeDiff={width:e.outerWidth()-e.width(),height:e.outerHeight()-e.height()};this.originalMousePosition={left:g.pageX,top:g.pageY};this.aspectRatio=(typeof j.aspectRatio=="number")?j.aspectRatio:((this.originalSize.width/this.originalSize.height)||1);var i=c(".ui-resizable-"+this.axis).css("cursor");c("body").css("cursor",i=="auto"?this.axis+"-resize":i);e.addClass("ui-resizable-resizing");this._propagate("start",g);return true},_mouseDrag:function(e){var h=this.helper,g=this.options,m={},q=this,j=this.originalMousePosition,n=this.axis;var r=(e.pageX-j.left)||0,p=(e.pageY-j.top)||0;var i=this._change[n];if(!i){return false}var l=i.apply(this,[e,r,p]),k=c.browser.msie&&c.browser.version<7,f=this.sizeDiff;this._updateVirtualBoundaries(e.shiftKey);if(this._aspectRatio||e.shiftKey){l=this._updateRatio(l,e)}l=this._respectSize(l,e);this._propagate("resize",e);h.css({top:this.position.top+"px",left:this.position.left+"px",width:this.size.width+"px",height:this.size.height+"px"});if(!this._helper&&this._proportionallyResizeElements.length){this._proportionallyResize()}this._updateCache(l);this._trigger("resize",e,this.ui());return false},_mouseStop:function(h){this.resizing=false;var i=this.options,m=this;if(this._helper){var g=this._proportionallyResizeElements,e=g.length&&(/textarea/i).test(g[0].nodeName),f=e&&c.ui.hasScroll(g[0],"left")?0:m.sizeDiff.height,k=e?0:m.sizeDiff.width;var n={width:(m.helper.width()-k),height:(m.helper.height()-f)},j=(parseInt(m.element.css("left"),10)+(m.position.left-m.originalPosition.left))||null,l=(parseInt(m.element.css("top"),10)+(m.position.top-m.originalPosition.top))||null;if(!i.animate){this.element.css(c.extend(n,{top:l,left:j}))}m.helper.height(m.size.height);m.helper.width(m.size.width);if(this._helper&&!i.animate){this._proportionallyResize()}}c("body").css("cursor","auto");this.element.removeClass("ui-resizable-resizing");this._propagate("stop",h);if(this._helper){this.helper.remove()}return false},_updateVirtualBoundaries:function(g){var j=this.options,i,h,f,k,e;e={minWidth:a(j.minWidth)?j.minWidth:0,maxWidth:a(j.maxWidth)?j.maxWidth:Infinity,minHeight:a(j.minHeight)?j.minHeight:0,maxHeight:a(j.maxHeight)?j.maxHeight:Infinity};if(this._aspectRatio||g){i=e.minHeight*this.aspectRatio;f=e.minWidth/this.aspectRatio;h=e.maxHeight*this.aspectRatio;k=e.maxWidth/this.aspectRatio;if(i>e.minWidth){e.minWidth=i}if(f>e.minHeight){e.minHeight=f}if(hl.width),s=a(l.height)&&i.minHeight&&(i.minHeight>l.height);if(h){l.width=i.minWidth}if(s){l.height=i.minHeight}if(t){l.width=i.maxWidth}if(m){l.height=i.maxHeight}var f=this.originalPosition.left+this.originalSize.width,p=this.position.top+this.size.height;var k=/sw|nw|w/.test(q),e=/nw|ne|n/.test(q);if(h&&k){l.left=f-i.minWidth}if(t&&k){l.left=f-i.maxWidth}if(s&&e){l.top=p-i.minHeight}if(m&&e){l.top=p-i.maxHeight}var n=!l.width&&!l.height;if(n&&!l.left&&l.top){l.top=null}else{if(n&&!l.top&&l.left){l.left=null}}return l},_proportionallyResize:function(){var k=this.options;if(!this._proportionallyResizeElements.length){return}var g=this.helper||this.element;for(var f=0;f');var e=c.browser.msie&&c.browser.version<7,g=(e?1:0),h=(e?2:-1);this.helper.addClass(this._helper).css({width:this.element.outerWidth()+h,height:this.element.outerHeight()+h,position:"absolute",left:this.elementOffset.left-g+"px",top:this.elementOffset.top-g+"px",zIndex:++i.zIndex});this.helper.appendTo("body").disableSelection()}else{this.helper=this.element}},_change:{e:function(g,f,e){return{width:this.originalSize.width+f}},w:function(h,f,e){var j=this.options,g=this.originalSize,i=this.originalPosition;return{left:i.left+f,width:g.width-f}},n:function(h,f,e){var j=this.options,g=this.originalSize,i=this.originalPosition;return{top:i.top+e,height:g.height-e}},s:function(g,f,e){return{height:this.originalSize.height+e}},se:function(g,f,e){return c.extend(this._change.s.apply(this,arguments),this._change.e.apply(this,[g,f,e]))},sw:function(g,f,e){return 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+ * http://benalman.com/about/license/
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+
+
+
+

+  

+
Install Walk-through 
  

+

+

+
This document provides specific instructions for installing PIO using a variety of compilers on a few commonly used super computers. Click on the link below to go directly to the machine of interest.

+
    
+
  • Yellowstone (NCAR's 1.5-petaflop IBM Supercomputer)
    • 
+
  • Edison (A NERSC Cray XC30 Supercomputer)
    • 
+
  • Mira (IBM Blue Gene Supercomputer at ALCF)
    • 
+
  • Blue Waters (NCSA's 1.3-petaflop Cray Supercomputer)
    • 
+
  • Hobart (The NCAR CGD local cluster)
    • 
+
  • Linux with MPICH (Standard Linux box with MPICH)
    • 
+

+
 
Yellowstone

+
    
+
  1. 
+
    Directory setup
    
+
    Download a copy of the PIO source into a sub-directory of your working directory (refered to here as the PIO_source directory). Create another sub-directory for the build (refered to here as the PIO_build directory) and 'cd' into it.
    
+
    
+
    2. 
+
  2. 
+
    Modules
    
+
    Modules required for installation depend on your prefered compiler. Issue the commands below to set the module environment for building PIO on Yellowstone.
    
+
      
+
    • Intel
      
+
      %> module reset
      
+ %> module unload netcdf
      
+ %> module swap intel intel/15.0.3
      
+ %> module load git/2.3.0
      
+ %> module load cmake/3.0.2
      
+ %> module load netcdf-mpi/4.3.3.1
      
+ %> module load pnetcdf/1.6.1
      
+
      
+
      • 
+
    • GNU
      
+
      %> module reset
      
+ %> module unload netcdf
      
+ %> module swap intel gnu/4.8.2
      
+ %> module load git/2.3.0
      
+ %> module load cmake/3.0.2
      
+ %> module load netcdf-mpi/4.3.3.1
      
+ %> module load pnetcdf/1.6.1
      
+
      
+
      • 
+
    • PGI
      
+
      %> module reset
      
+ %> module unload netcdf
      
+ %> module swap intel pgi/13.3
      
+ %> module load git/2.3.0
      
+ %> module load cmake/3.0.2
      
+ %> module load netcdf-mpi/4.3.3.1
      
+ %> module load pnetcdf/1.6.1
      
+
      
+
      • 
+
    
+
    
+
    3. 
+
  3. 
+
    Environment Variables
    
+
    The appropriate compiler wrappers must be chosen for cmake, so the environment variables CC and FC must be set as:
    
+ CC=mpicc
    
+ FC=mpif90
    
+
    
+
    
+
    4. 
+
  4. 
+
    Build
    
+
    Building PIO requires running the CMake configure and then make. In the PIO_build directory type
    
+ %> cmake ../PIO_source/
    
+ %> make
    
+ 
    
+
    5. 
+

+
 
Edison

+
    
+
  1. 
+
    Directory setup
    
+
    Download a copy of the PIO source into a sub-directory of your working directory (refered to here as the PIO_source directory). Create another sub-directory for the build (refered to here as the PIO_build directory) and 'cd' into it.
    
+
    
+
    2. 
+
  2. 
+
    Modules
    
+
    Modules required for installation depend on your prefered compiler. Issue the commands below to set the module environment for building PIO on Edison.
    
+
      
+
    • Intel
      
+
      %> module purge
      
+ %> module load PrgEnv-intel
      
+ %> module load craype-ivybridge
      
+ %> module load cray-shmem
      
+ %> module load cray-mpich
      
+ %> module load torque
      
+ %> module load git/2.4.6 
      
+ %> module load cmake/3.0.0
      
+ %> module load cray-hdf5-parallel/1.8.14
      
+ %> module load cray-netcdf-hdf5parallel/4.3.3.1
      
+ %> module load cray-parallel-netcdf/1.6.1
      
+
      
+
      • 
+
    • GNU
      
+
      %> module purge
      
+ %> module load PrgEnv-gnu
      
+ %> module load craype-ivybridge
      
+ %> module load cray-shmem
      
+ %> module load cray-mpich
      
+ %> module load torque
      
+ %> module load git/2.4.6
      
+ %> module load cmake/3.0.0
      
+ %> module load cray-hdf5-parallel/1.8.14
      
+ %> module load cray-netcdf-hdf5parallel/4.3.3.1
      
+ %> module load cray-parallel-netcdf/1.6.1
      
+
      
+
      • 
+
    • Cray
      
+
      %> module purge
      
+ %> module load PrgEnv-cray
      
+ %> module load craype-ivybridge
      
+ %> module load cray-shmem
      
+ %> module load cray-mpich
      
+ %> module swap cce cce/8.4.0.223
      
+ %> module load torque
      
+ %> module load git/2.4.6 
      
+ %> module load cmake/3.0.0
      
+ %> module load cray-hdf5-parallel/1.8.14
      
+ %> module load cray-netcdf-hdf5parallel/4.3.3.1
      
+ %> module load cray-parallel-netcdf/1.6.1
      
+
      
+
      • 
+
    
+
    
+
    3. 
+
  3. 
+
    Environment Variables
    
+
    The appropriate compiler wrappers must be chosen for cmake, so the environment variables CC and FC must be set as:
    
+ CC=cc
    
+ FC=ftn
    
+
    
+
    
+
    4. 
+
  4. 
+
    Build
    
+
    Building PIO requires running the CMake configure and then make. In the PIO_build directory type
    
+ %> cmake -DCMAKE_VERBOSE_MAKEFILE=TRUE \
    
+ -DPREFER_STATIC=TRUE \
    
+ -DNetCDF_PATH=${NETCDF_DIR} \
    
+ -DPnetCDF_PATH=${PARALLEL_NETCDF_DIR} \
    
+ -DHDF5_PATH=${HDF5_DIR} \
    
+ -DMPI_C_INCLUDE_PATH=${MPICH_DIR}/include \
    
+ -DMPI_Fortran_INCLUDE_PATH=${MPICH_DIR}/include \
    
+ -DMPI_C_LIBRARIES=${MPICH_DIR}/lib/libmpich.a \
    
+ -DMPI_Fortran_LIBRARIES=${MPICH_DIR}/lib/libmpichf90.a \
    
+ -DCMAKE_SYSTEM_NAME=Catamount \
    
+ ../PIO_source/
    
+ %> make
    
+
    
+
    5. 
+

+
 
Mira/Cetus

+
    
+
  1. 
+
    Directory setup
    
+
    Download a copy of the PIO source into a sub-directory of your working directory (refered to here as the PIO_source directory). Create another sub-directory for the build (refered to here as the PIO_build directory) and 'cd' into it.
    
+
    
+
    2. 
+
  2. 
+
    Softenv packages and environment variables
    
+
    It is not necessary to edit your .soft file on Mira inorder to build PIO. Execute the following commands to temporarily load packages into your softenv. These packages use the IBM/XL compiler.
    
+ %> soft add +mpiwrapper-xl (or switch from the default in your softenv)
    
+ %> soft add -compilers-2015-02
    
+ %> soft add +cmake
    
+ %> soft add +git
    
+
    
+
    And then set the following environment variables to add in the rest of the library paths.
    
+ %> setenv LIBZ /soft/libraries/alcf/current/xl/ZLIB
    
+ %> setenv HDF5 /soft/libraries/hdf5/1.8.14/cnk-xl/V1R2M2-20150213
    
+ %> setenv NETCDF /soft/libraries/netcdf/4.3.3-f4.4.1/cnk-xl/V1R2M2-20150213
    
+ %> setenv PNETCDF /soft/libraries/pnetcdf/1.6.1/cnk-xl/V1R2M2-20150213
    
+ %> setenv CC /soft/compilers/wrappers/xl/mpixlc_r
    
+ %> setenv FC /soft/compilers/wrappers/xl/mpixlf90_r
    
+
    
+
    
+
    3. 
+
  3. 
+
    Build
    
+
    Building PIO requires running the CMake configure and then make. In the PIO_build directory type
    
+ %> cmake -DPREFER_STATIC=TRUE ../PIO_source/
    
+ %> make
    
+
    
+
    4. 
+

+
 
Blue Waters

+
    
+
  1. 
+
    Directory setup
    
+
    Download a copy of the PIO source into a sub-directory of your working directory (refered to here as the PIO_source directory). Create another sub-directory for the build (refered to here as the PIO_build directory) and 'cd' into it.
    
+
    
+
    2. 
+
  2. 
+
    Modules
    
+
    Modules required for installation depend on your prefered compiler. Issue the commands below to set the module environment for building PIO on Hobart.
    
+
      
+
    • Intel
      
+
      %> module swap PrgEnv-cray PrgEnv-intel
      
+ %> module load torque
      
+ %> module load git
      
+ %> module load cmake
      
+ %> module load cray-hdf5-parallel/1.8.14
      
+ %> module load cray-netcdf-hdf5parallel/4.3.3.1
      
+ %> module load cray-parallel-netcdf/1.6.1
      
+
      
+
      • 
+
    • PGI
      
+
      %> module swap PrgEnv-cray PrgEnv-pgi
      
+ %> module load torque
      
+ %> module load git
      
+ %> module load cmake
      
+ %> module load cray-hdf5-parallel/1.8.14
      
+ %> module load cray-netcdf-hdf5parallel/4.3.3.1
      
+ %> module load cray-parallel-netcdf/1.6.1
      
+
      
+
      • 
+
    
+
    
+
    3. 
+
  3. 
+
    Environment Variables
    
+
    The appropriate compiler wrappers must be chosen for cmake, so the environment variables CC and FC must be set as:
    
+ CC=cc
    
+ FC=ftn
    
+
    
+
    
+
    4. 
+
  4. 
+
    Build
    
+
    Building PIO requires running the CMake configure and then make. In the PIO_build directory type
    
+ %> cmake -DCMAKE_VERBOSE_MAKEFILE=TRUE \
    
+ -DPREFER_STATIC=TRUE \
    
+ -DNetCDF_PATH=${NETCDF_DIR} \
    
+ -DPnetCDF_PATH=${PARALLEL_NETCDF_DIR} \
    
+ -DHDF5_PATH=${HDF5_DIR} \
    
+ -DMPI_C_INCLUDE_PATH=${MPICH_DIR}/include \
    
+ -DMPI_Fortran_INCLUDE_PATH=${MPICH_DIR}/include \
    
+ -DMPI_C_LIBRARIES=${MPICH_DIR}/lib/libmpich.a \
    
+ -DMPI_Fortran_LIBRARIES=${MPICH_DIR}/lib/libmpichf90.a \
    
+ -DCMAKE_SYSTEM_NAME=Catamount \
    
+ ../PIO_source/
    
+ %> make
    
+
    
+
    5. 
+

+
 
Hobart

+
    
+
  1. 
+
    Directory setup
    
+
    Download a copy of the PIO source into a sub-directory of your working directory (refered to here as the PIO_source directory). Create another sub-directory for the build (refered to here as the PIO_build directory) and 'cd' into it.
    
+
    
+
    2. 
+
  2. 
+
    Modules
    
+
    Modules required for installation depend on your prefered compiler. Issue the commands below to set the module environment for building PIO on Hobart.
    
+
      
+
    • Intel
      
+
      %> module purge
      
+ %> module load compiler/intel/15.0.2.164
      
+ %> module load tool/parallel-netcdf/1.6.1/intel
      
+
      
+
      • 
+
    • Nag
      
+
      %> module purge
      
+ %> module load compiler/nag/6.0
      
+ %> module load tool/parallel-netcdf/1.6.1/nag/openmpi
      
+
      
+
      • 
+
    • PGI
      
+
      %> module purge
      
+ %> module load compiler/pgi/15.1
      
+ %> module load tool/parallel-netcdf/1.6.1/pgi/mvapich2
      
+
      
+
      • 
+
    
+
    
+
    3. 
+
  3. 
+
    Environment Variables
    
+
    The appropriate compiler wrappers must be chosen for cmake, so the environment variables CC and FC must be set as:
    
+ CC=mpicc
    
+ FC=mpif90
    
+
    
+
    
+
    4. 
+
  4. 
+
    Build
    
+
    Building PIO requires running the CMake configure and then make. In the PIO_build directory type
    
+ %> cmake -DNETCDF_DIR=$NETCDF_PATH -DPNETCDF_DIR=$PNETCDF_PATH ../PIO_source/
    
+ %> make
    
+
    ParallelIO does not require Parallel netcdf to run, so if you decide to use the GNU compiler on Hobart (not described here) without the parallel-netcdf library, use the cmake configure flags:
    
+ %> cmake -DNETCDF_DIR=$NETCDF_PATH -DWITH_PNETCDF=FALSE ../PIO_source/
    
+ %> make
    
+
    
+
    5. 
+

+
 
Linux with MPICH

+
    
+
  1. 
+
    Installing MPICH
    
+
    
+
    Download from the MPICH2 downloads page. (These instructions were tested using version 3.2). Untar with: 
    tar zxf mpich-3.2.tar.gz
    
+
    Build with: 
    cd mpich-3.2 && ./configure --prefix=/usr/local && make all check
+&& sudo make install 
    
+
    Now you should be able to access mpicc, mpifort, and mpirun from the command line. (If not, make sure /usr/local/bin is in path.)
    
+
    
+
    Note that if you wish to use valgrind on your programs, you should configure MPICH like this: 
    CPPFLAGS=-I/usr/include/valgrind ./configure --prefix=/usr/local --enable-g=mem,meminit
    
+
    For this to work you must have packages valgrind and valgrind-devel installed.
    
+
    
+
    2. 
+
  2. 
+
    Installing Zlib
    
+
    
+
    Download from the zlib downloads page. (These instructions were tested using version 1.2.11). Untar with: 
    tar zxf zlib-1.2.11.tar.gz
    
+
    Build with: 
    cd zlib-1.2.11
+CC=mpicc ./configure --prefix=/usr/local/zlib-1.2.11_mpich-3.2
+make all check
+sudo make install 
    
+
    3. 
+
  3. 
+
    Installing SZlib
    
+
    
+
    Download szlib from the HDF5 szlib page. (These instructions were tested using version 2.1). Untar with: 
    tar zxf szip-2.1.tar.gz
    
+
    Build with: 
    cd slib-2.1
+CC=mpicc ./configure --prefix=/usr/local/szip-2.1_mpich-3.2
+make all check
+sudo make install 
    
+
    4. 
+
  4. 
+
    Installing pNetCDF
    
+
    
+
    Download parallel-netcdf from the parallel-netcdf download page. (These instructions were tested using version 1.8.1). Untar with: 
    tar zxf parallel-netcdf-1.8.1.tar.gz
    
+
    Build with: 
    cd parallel-netcdf-1.8.1
+FC=mpifort CC=mpicc CFLAGS=-fPIC ./configure --prefix=/usr/local/pnetcdf-1.8.1_mpich-3.2
+make all check
+sudo make install 
    
+
    5. 
+
  5. 
+
    Installing HDF5
    
+
    
+
    Download HDF5 from the HDF5 download page.
    
+
    
+
    These instructions were tested using version 1.10.1. Untar with: 
    tar zxf hdf5-1.10.1.tar.gz
    . Note that in my case I need to add /usr/local/bin to the PATH for su, because that is where mpicc is found.
    
+
    
+
    Build with: 
    cd hdf5-1.10.1
+CC=mpicc ./configure --with-zlib=/usr/local/zlib-1.2.11_mpich-3.2 --with-szlib=/usr/local/szip-2.1_mpich-3.2 --prefix=/usr/local/hdf5-1.10.1_mpich-3.2 --enable-parallel
+make all check
+sudo PATH=$PATH:/usr/local/bin make install
    6. 
+
  6. 
+
    Installing NetCDF-4 C Library
    Download the netcdf C library from the NetCDF download
+page. Untar with: 
    tar zxf netcdf-c-4.5.0-rc1.tar.gz
    Build with:
+
    cd netcdf-c-4.5.0-rc1
+CPPFLAGS='-I/usr/local/zlib-1.2.11_mpich-3.2 -I/usr/local/szip-2.1_mpich-3.2/include -I/usr/local/hdf5-1.10.1_mpich-3.2/include' LDFLAGS='-L/usr/local/zlib-1.2.11_mpich-3.2/lib -L/usr/local/szip-2.1_mpich-3.2/lib -L/usr/local/hdf5-1.10.1_mpich-3.2/lib' CC=mpicc ./configure --enable-parallel-tests --prefix=/usr/local/netcdf-4.4.1_mpich-3.2
+make all check
+sudo make install 
    Note that you may not build netCDF with it's built-in
+parallel-netCDF support, if you are also planning to use the
+parallel-netCDF library with PIO. For PIO, parallel-netCDF must be
+installed independently of netCDF.
    7. 
+
  7. 
+
    Installing NetCDF-4 Fortran Library
    Download the netcdf Fortran library from the NetCDF download
+page. Untar
+with: 
    tar zxf netcdf-fortran-4.4.4.tar.gz
    Build with:
+
    cd netcdf-fortran-4.4.4
+CC=mpicc LD_LIBRARY_PATH=/usr/local/netcdf-4.4.1_mpich-3.2/lib FC=mpifort CPPFLAGS=-I/usr/local/netcdf-4.4.1_mpich-3.2/include LDFLAGS=-L/usr/local/netcdf-4.4.1_mpich-3.2/lib ./configure --enable-parallel-tests --prefix=/usr/local/netcdf-fortran-4.4.4_c_4.4.1_mpich-3.2
+make all
+sudo make install 
    Note that make check did not work because of a failure in a
+test. This has been reported to the netCDF team.
    8. 
+
  8. 
+
    Installing ParallelIO Library
    Clone the ParallelIO library.
    Create a build directory and run cmake.
+
    +cd ParallelIO
+mkdir build
+cd build
+CC=mpicc FC=mpifort cmake -DNetCDF_C_PATH=/usr/local/netcdf-4.4.1_mpich-3.2 -DNetCDF_Fortran_PATH=/usr/local/netcdf-fortran-4.4.4_c_4.4.1_mpich-3.2 -DPnetCDF_PATH=/usr/local/pnetcdf-1.8.1_mpich-3.2 -DPIO_HDF5_LOGGING=On -DPIO_USE_MALLOC=On ..
+make
+make check
+sudo make install
+
    When debugging build issues, it's helpful to be able to do a clean
+build from the command line, including tests:
    +cd build
+rm -rf * && CFLAGS='-Wall -g' FFLAGS=-g CC=mpicc FC=mpifort cmake -DNetCDF_C_PATH=/usr/local/netcdf-4.4.1_mpich-3.2 -DNetCDF_Fortran_PATH=/usr/local/netcdf-fortran-4.4.4_c_4.4.1_mpich-3.2 -DPnetCDF_PATH=/usr/local/pnetcdf-1.8.1_mpich-3.2 -DPIO_HDF5_LOGGING=On -DPIO_USE_MALLOC=On -DPIO_ENABLE_LOGGING=On .. && make VERBOSE=1 all tests check
+
    To build with address sanitizer:
    +rm -rf * && CFLAGS='-Wall -g  -fsanitize=address -fno-omit-frame-pointer' FFLAGS='-g  -fsanitize=address -fno-omit-frame-pointer' CC=mpicc FC=mpifort cmake -DNetCDF_C_PATH=/usr/local/netcdf-4.4.1_mpich-3.2 -DNetCDF_Fortran_PATH=/usr/local/netcdf-fortran-4.4.4_c_4.4.1_mpich-3.2 -DPnetCDF_PATH=/usr/local/pnetcdf-1.8.1_mpich-3.2 -DPIO_HDF5_LOGGING=On -DPIO_USE_MALLOC=On -DPIO_ENABLE_LOGGING=On .. && make VERBOSE=1 all tests check
+
    Note the optional CFLAGS=-g which allows the use of a debugger
+with this code. Also note the optional VERBOSE=1 provided to make,
+which causes the build commands to be made visible.
    Note also the -DPIO_ENABLE_LOGGING=On which is helpful for debugging but should probably not be used in production builds.
    9. 
+
  9. 
+
    Building PIO with autotools.
    To build the PIO library with autotools, clone the repo and use a command like this:
    +autoreconf -i && LD_LIBRARY_PATH=/usr/local/netcdf-4.4.1_mpich-3.2/lib CC=mpicc CFLAGS='-g' CPPFLAGS='-I/usr/local/netcdf-4.4.1_mpich-3.2/include/ -I/usr/local/pnetcdf-1.8.1_mpich-3.2/include' LDFLAGS='-L/usr/local/netcdf-4.4.1_mpich-3.2/lib -L/usr/local/pnetcdf-1.8.1_mpich-3.2/lib' ./configure && make check
+
    To build with debug logging and the address sanitizer for memory checking (debugging builds only!):
    +autoreconf -i && LD_LIBRARY_PATH=/usr/local/netcdf-4.4.1_mpich-3.2/lib CC=mpicc CFLAGS='-g -fsanitize=address -fno-omit-frame-pointer' CPPFLAGS='-I/usr/local/netcdf-4.4.1_mpich-3.2/include/ -I/usr/local/pnetcdf-1.8.1_mpich-3.2/include' LDFLAGS='-L/usr/local/netcdf-4.4.1_mpich-3.2/lib -L/usr/local/pnetcdf-1.8.1_mpich-3.2/lib' ./configure --enable-logging && make check
+ 
    10. 
+
  10. 
+
    Building and Running Performance Tests
    Download a decomp file from our google
+code page. You can use any of those files, save them to
+build/test/performance. (These instructions were tested with the first
+one in the list.)
    Create a namelist file, named "pioperf.nl". Save this file in the
+subdirectory (note that it is in the BUILD directory):
+
    +build/tests/performance/
+
    The contents of the namelist file should look like:
+
    +&pioperf
+decompfile = "/u/sciteam/thayerca/scratch/pio_work/piodecomp30tasks01dims06.dat"
+pio_typenames = 'pnetcdf'
+niotasks = 30
+rearrangers = 1
+nvars = 2
+/
+
    You should change the path to your decomp file to wherever you
+saved it. You can add items to the list to run more tests, so, for
+instance, to test all of the types of io, your pio_typenames would
+look like: pio_typenames = 'pnetcdf','netcdf','netcdf4p','netcdf4c'
    HDF5 is netcdf4p, and Parallel-Netcdf is pnetcdf.
    Example to test with different numbers of tasks, you could do:
+niotasks = 30,15,5
    Example to test with both of the rearranger algorithms:
+rearrangers = 1,2
    Example to test with different numbers of variables:
+nvars = 8,5,3,2
    Once you have your decomp file and your namelist set up, run like this:
    +mpiexec -n 30 ./pioperf
+
    If you run the most basic performance tests (as in the first
+pioperf.nl example), this script should only take a few minutes (less
+than 5) to complete. The output and results will be written to your
+pioperf.o$PBS_JOBID file. Adding more iotypes and rearrangers and
+variables to these tests will increase the time significantly.
    11. 
+

+
Last updated: 05-16-2016
+

+
+

+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+

+
+
diff --git a/docs/menu.js b/docs/menu.js
new file mode 100644
index 00000000000..97db4c23922
--- /dev/null
+++ b/docs/menu.js
@@ -0,0 +1,26 @@
+function initMenu(relPath,searchEnabled,serverSide,searchPage,search) {
+  function makeTree(data,relPath) {
+    var result='';
+    if ('children' in data) {
+      result+='';
+    }
+    return result;
+  }
+
+  $('#main-nav').append(makeTree(menudata,relPath));
+  $('#main-nav').children(':first').addClass('sm sm-dox').attr('id','main-menu');
+  if (searchEnabled) {
+    if (serverSide) {
+      $('#main-menu').append('
    • ');
+    } else {
+      $('#main-menu').append('
    • ');
+    }
+  }
+  $('#main-menu').smartmenus();
+}
diff --git a/docs/menudata.js b/docs/menudata.js
new file mode 100644
index 00000000000..42727242878
--- /dev/null
+++ b/docs/menudata.js
@@ -0,0 +1,40 @@
+var menudata={children:[
+{text:"PIO User's Guide",url:"index.html"},
+{text:"Appendix",url:"annotated.html",children:[
+{text:"Modules",url:"modules.html"},
+{text:"Data Types",url:"annotated.html"},
+{text:"Page Index",url:"pages.html"}]},
+{text:"Files",url:"files.html",children:[
+{text:"File List",url:"files.html"},
+{text:"File Members",url:"globals.html",children:[
+{text:"All",url:"globals.html",children:[
+{text:"b",url:"globals.html#index_b"},
+{text:"c",url:"globals_c.html#index_c"},
+{text:"d",url:"globals_d.html#index_d"},
+{text:"e",url:"globals_e.html#index_e"},
+{text:"f",url:"globals_f.html#index_f"},
+{text:"g",url:"globals_g.html#index_g"},
+{text:"i",url:"globals_i.html#index_i"},
+{text:"l",url:"globals_l.html#index_l"},
+{text:"m",url:"globals_m.html#index_m"},
+{text:"n",url:"globals_n.html#index_n"},
+{text:"p",url:"globals_p.html#index_p"},
+{text:"r",url:"globals_r.html#index_r"},
+{text:"s",url:"globals_s.html#index_s"},
+{text:"v",url:"globals_v.html#index_v"},
+{text:"w",url:"globals_w.html#index_w"},
+{text:"x",url:"globals_x.html#index_x"}]},
+{text:"Functions/Subroutines",url:"globals_func.html",children:[
+{text:"c",url:"globals_func.html#index_c"},
+{text:"e",url:"globals_func_e.html#index_e"},
+{text:"f",url:"globals_func_f.html#index_f"},
+{text:"g",url:"globals_func_g.html#index_g"},
+{text:"i",url:"globals_func_i.html#index_i"},
+{text:"l",url:"globals_func_l.html#index_l"},
+{text:"m",url:"globals_func_m.html#index_m"},
+{text:"p",url:"globals_func_p.html#index_p"}]},
+{text:"Variables",url:"globals_vars.html"},
+{text:"Typedefs",url:"globals_type.html"},
+{text:"Enumerations",url:"globals_enum.html"},
+{text:"Enumerator",url:"globals_eval.html"},
+{text:"Macros",url:"globals_defs.html"}]}]}]}
diff --git a/docs/modules.html b/docs/modules.html
new file mode 100644
index 00000000000..07a1b3a7176
--- /dev/null
+++ b/docs/modules.html
@@ -0,0 +1,137 @@
+
+
+
+
+
+
+
+PIO: Modules
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
    
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
    
+  
    
+
    Modules
      
    
+
    
+
    
+
    Here is a list of all modules:
    
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
     PIO_set_blocksize
     PIO_inq_dimid
     PIO_inquire_dimension
     PIO_inq_dimlen
     PIO_inq_dimname
     PIO_inq_ndims
     PIO_inq_nvars
     PIO_inq_natts
     PIO_inq_unlimdim
     PIO_inquire
     PIO_enddef
     PIO_redef
     PIO_set_log_level
     PIO_strerror
     PIO_def_dimA set of functions to define dimensions and their attributes in NetCDF files 
     PIO_inquire_variable
     PIO_inq_vardimid
     PIO_inq_varndims
     PIO_inq_vartype
     PIO_inq_varnatts
     PIO_inq_var_deflate
     PIO_inq_varname
     PIO_inq_varid
     PIO_inq_attlen
     PIO_inq_att
     PIO_inq_attname
     PIO_def_var
     io descriptors, generatingThe io descriptor structure in defined in this subroutine and subsequently used in PIO_read_darray, PIO_write_darray, PIO_put_var, PIO_get_var calls (see pio_types) 
     PIO_iotypeAn integer parameter which controls the iotype 
     PIO_rearr_methodThe three choices to control rearrangement are: 
     error_methods
     error return codes: The error return code; ierr != PIO_noerr indicates an error 
     PIO_kindsThe base types supported by PIO are: 
     PIO_rearr_comm_tThe two choices for rearranger communication 
     PIO_rearr_comm_dirThe four choices for rearranger communication direction 
     PIO_rearr_comm_fc_optionsType that defines the PIO rearranger options 
     PIO_rearr_optionsType that defines the PIO rearranger options 
     PIO_openfile
     PIO_syncfile
     PIO_createfile
     PIO_setframeSets the unlimited dimension for netcdf file 
     PIO_advanceframe
     PIO_closefile
     PIO_freedecompFree memory associated with a io descriptor 
     PIO_initInitializes the pio subsystem 
     PIO_finalizeShuts down and cleans up any memory associated with the pio library 
     PIO_initdecompPIO_initdecomp is an overload interface the models decomposition to pio 
     PIO_getnumiotasksReturns the actual number of IO-tasks used 
     PIO_setdebuglevelSets the level of debug information that pio will generate 
     PIO_seterrorhandlingSets the form of error handling for pio 
     PIO_get_local_array_size
     PIO_set_hintSet file system hints using mpi_info_set 
     PIO_write_darrayThe overloaded PIO_write_darray writes a distributed array to disk 
     PIO_read_darrayThe overloaded PIO_read_darray function reads a distributed array from disk 
     PIO_put_attWrites an netcdf attribute to a file 
     PIO_get_attReads an netcdf attribute from a file 
     PIO_get_varReads non-decomposed data from a NetCDF file 
     PIO_put_varWrites data to a netCDF file 
    
+
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/nav_f.png b/docs/nav_f.png
new file mode 100644
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GIT binary patch
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literal 0
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diff --git a/docs/nav_g.png b/docs/nav_g.png
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GIT binary patch
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znK1_#cQqJWPES%4Uujug^TE?jMft$}Eq^WaR~)%f)vSNs&gek&x%A9X9sM
+
+
+
+
+
+
+PIO: Page Index
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
    
+
+
    
+
    
+
+
+
    
+
+
    
+
+
    
+  
    
+
    Page Index
      
    
+
    
+
    
+
    Here is a list of all related documentation pages:
    
+
    [detail level 12]
    
+
+
+
+
+
+
+
+
+
+
+
+
+
+
     PIO user interface
     Guide for Contributors
     Describing decompositions
     Error Handling
     ▼Examples
     Community Atmosphere Model (CAM)
     testpio: a regression and benchmarking code
     Frequently Asked Questions
     Introduction
     Installing PIO
     Install Walk-through
     Testing
     Deprecated List
    
+
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pio_8_f90.html b/docs/pio_8_f90.html
new file mode 100644
index 00000000000..42d9fd2f077
--- /dev/null
+++ b/docs/pio_8_f90.html
@@ -0,0 +1,174 @@
+
+
+
+
+
+
+
+PIO: pio.F90 File Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+Functions/Subroutines  
    
+  
    
+
    pio.F90 File Reference
      
    
+
    
+
    
+
+
    User interface Module for PIO, this is the only file a user program should 'use'.  
+More...
    
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
    
+Functions/Subroutines
    
+subroutine pio::pio_set_blocksize (blocksize)
     Set the target blocksize for the box rearranger. 
     
    logical function pio::pio_iam_iotask (iosystem)
     Logical function returns true if the task is an IO task.  More...
     
    integer function pio::pio_iotask_rank (iosystem)
     Integer function returns rank of IO task.  More...
     
    subroutine pio::pio_iosystem_is_active (iosystem, active)
     Sets active to true if IO system is active.  More...
     
    
+
    Detailed Description
    
+
    User interface Module for PIO, this is the only file a user program should 'use'. 
    
+
    Function/Subroutine Documentation
    
+
+
    ◆ pio_iam_iotask()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+          
+        
+      
    logical function pio::pio_iam_iotask (type(iosystem_desc_t), intent(in) iosystem)
    
+
    
+
+
    Logical function returns true if the task is an IO task. 
    
+
+
    
+
    
+
+
    ◆ pio_iosystem_is_active()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    subroutine pio::pio_iosystem_is_active (type(iosystem_desc_t), intent(in) iosystem, 
    logical, intent(out) active 
    )
    
+
    
+
+
    Sets active to true if IO system is active. 
    
+
+
    
+
    
+
+
    ◆ pio_iotask_rank()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+          
+        
+      
    integer function pio::pio_iotask_rank (type(iosystem_desc_t), intent(in) iosystem)
    
+
    
+
+
    Integer function returns rank of IO task. 
    
+
+
    
+
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:07 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pio_8h.html b/docs/pio_8h.html
new file mode 100644
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--- /dev/null
+++ b/docs/pio_8h.html
@@ -0,0 +1,8713 @@
+
+
+
+
+
+
+
+PIO: pio.h File Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+Classes |
+Macros |
+Typedefs |
+Enumerations |
+Functions  
    
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    pio.h File Reference
      
    
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    Public headers for the PIO C interface.  
+More...
    
+
    #include <stdio.h>
    
+#include <stdlib.h>
    
+#include <stdbool.h>
    
+#include <string.h>
    
+#include <mpi.h>
    
+
    
+Include dependency graph for pio.h:
    
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+This graph shows which files directly or indirectly include this file:
    
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+Classes
    struct  var_desc_t
     Variable description structure.  More...
     
    struct  io_region
     IO region structure.  More...
     
    struct  rearr_comm_fc_opt
     Rearranger comm flow control options.  More...
     
    struct  rearr_opt
     Rearranger options.  More...
     
    struct  io_desc_t
     IO descriptor structure.  More...
     
    struct  iosystem_desc_t
     IO system descriptor structure.  More...
     
    struct  wmulti_buffer
     The multi buffer holds data from one or more variables.  More...
     
    struct  file_desc_t
     File descriptor structure.  More...
     
    
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+Macros
    #define MPI_OFFSET   MPI_LONG_LONG
     MPI_OFFSET is an integer type of size sufficient to represent the size (in bytes) of the largest file supported by MPI.  More...
     
    #define PIO_OFFSET   MPI_OFFSET
     PIO_OFFSET is an integer type of size sufficient to represent the size (in bytes) of the largest file supported by MPI.  More...
     
    
+#define PIO_Offset   MPI_Offset
     
    #define PIO_MAX_VARS   NC_MAX_VARS
     The maximum number of variables allowed in a netCDF file.  More...
     
    #define PIO_MAX_DIMS   NC_MAX_DIMS
     The maximum number of dimensions allowed in a netCDF file.  More...
     
    #define PIO_DEFAULT   (-1)
     Pass this to PIOc_set_iosystem_error_handling() as the iosysid in order to set default error handling.  More...
     
    #define DECOMP_VERSION_ATT_NAME   "PIO_library_version"
     Used in the decomposition netCDF file.  More...
     
    
+#define DECOMP_MAX_MAPLEN_ATT_NAME   "max_maplen"
     
    
+#define DECOMP_TITLE_ATT_NAME   "title"
     
    
+#define DECOMP_HISTORY_ATT_NAME   "history"
     
    
+#define DECOMP_SOURCE_ATT_NAME   "source"
     
    
+#define DECOMP_ORDER_ATT_NAME   "array_order"
     
    
+#define DECOMP_BACKTRACE_ATT_NAME   "backtrace"
     
    
+#define DECOMP_DIM_DIM   "dims"
     
    
+#define DECOMP_TASK_DIM_NAME   "task"
     
    
+#define DECOMP_MAPELEM_DIM_NAME   "map_element"
     
    
+#define DECOMP_NDIMS   "ndims"
     
    
+#define DECOMP_GLOBAL_SIZE_VAR_NAME   "global_size"
     
    
+#define DECOMP_MAPLEN_VAR_NAME   "maplen"
     
    
+#define DECOMP_MAP_VAR_NAME   "map"
     
    
+#define DECOMP_C_ORDER_STR   "C"
     
    
+#define DECOMP_FORTRAN_ORDER_STR   "Fortran"
     
    
+#define PIO_REARR_COMM_UNLIMITED_PEND_REQ   -1
     
    #define PIO_EINDEP   (-203)
     Define the extra error codes for the parallel-netcdf library.  More...
     
    #define PIO_FIRST_ERROR_CODE   (-500)
     Define error codes for PIO.  More...
     
    
+#define PIO_EBADIOTYPE   (-500)
     
    
+#define PIO_REQ_NULL   (NC_REQ_NULL-1)
     ??? 
     
    
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+Typedefs
    
+typedef struct var_desc_t var_desc_t
     Variable description structure. 
     
    typedef struct io_region io_region
     IO region structure.  More...
     
    
+typedef struct rearr_comm_fc_opt rearr_comm_fc_opt_t
     Rearranger comm flow control options. 
     
    
+typedef struct rearr_opt rearr_opt_t
     Rearranger options. 
     
    typedef struct io_desc_t io_desc_t
     IO descriptor structure.  More...
     
    typedef struct iosystem_desc_t iosystem_desc_t
     IO system descriptor structure.  More...
     
    typedef struct wmulti_buffer wmulti_buffer
     The multi buffer holds data from one or more variables.  More...
     
    typedef struct file_desc_t file_desc_t
     File descriptor structure.  More...
     
    
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+Enumerations
    enum  PIO_REARR_COMM_TYPE { PIO_REARR_COMM_P2P = (0), 
+PIO_REARR_COMM_COLL
+ }
     Rearranger comm type.  More...
     
    enum  PIO_REARR_COMM_FC_DIR { PIO_REARR_COMM_FC_2D_ENABLE = (0), 
+PIO_REARR_COMM_FC_1D_COMP2IO, 
+PIO_REARR_COMM_FC_1D_IO2COMP, 
+PIO_REARR_COMM_FC_2D_DISABLE
+ }
     Rearranger comm flow control direction.  More...
     
    enum  PIO_IOTYPE { PIO_IOTYPE_PNETCDF = 1, 
+PIO_IOTYPE_NETCDF = 2, 
+PIO_IOTYPE_NETCDF4C = 3, 
+PIO_IOTYPE_NETCDF4P = 4
+ }
     These are the supported methods of reading/writing netCDF files.  More...
     
    enum  PIO_REARRANGERS { PIO_REARR_BOX = 1, 
+PIO_REARR_SUBSET = 2
+ }
     These are the supported output data rearrangement methods.  More...
     
    enum  PIO_ERROR_HANDLERS { PIO_INTERNAL_ERROR = (-51), 
+PIO_BCAST_ERROR = (-52), 
+PIO_RETURN_ERROR = (-53)
+ }
     These are the supported error handlers.  More...
     
    
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+Functions
    
+int PIOc_strerror (int pioerr, char *errstr)
     
    
+int PIOc_set_log_level (int level)
     
    int PIOc_InitDecomp (int iosysid, int pio_type, int ndims, const int *gdimlen, int maplen, const PIO_Offset *compmap, int *ioidp, const int *rearr, const PIO_Offset *iostart, const PIO_Offset *iocount)
     Initialize the decomposition used with distributed arrays.  More...
     
    int PIOc_InitDecomp_bc (int iosysid, int basetype, int ndims, const int *gdimlen, const long int *start, const long int *count, int *ioidp)
     This is a simplified initdecomp which can be used if the memory order of the data can be expressed in terms of start and count on the file.  More...
     
    int PIOc_init_decomp (int iosysid, int pio_type, int ndims, const int *gdimlen, int maplen, const PIO_Offset *compmap, int *ioidp, int rearranger, const PIO_Offset *iostart, const PIO_Offset *iocount)
     Initialize the decomposition used with distributed arrays.  More...
     
    
+int PIOc_freedecomp (int iosysid, int ioid)
     
    
+int PIOc_readmap (const char *file, int *ndims, int **gdims, PIO_Offset *fmaplen, PIO_Offset **map, MPI_Comm comm)
     
    
+int PIOc_readmap_from_f90 (const char *file, int *ndims, int **gdims, PIO_Offset *maplen, PIO_Offset **map, int f90_comm)
     
    
+int PIOc_writemap (const char *file, int ndims, const int *gdims, PIO_Offset maplen, PIO_Offset *map, MPI_Comm comm)
     
    
+int PIOc_writemap_from_f90 (const char *file, int ndims, const int *gdims, PIO_Offset maplen, const PIO_Offset *map, int f90_comm)
     
    
+int PIOc_write_decomp (const char *file, int iosysid, int ioid, MPI_Comm comm)
     
    
+int PIOc_write_nc_decomp (int iosysid, const char *filename, int cmode, int ioid, char *title, char *history, int fortran_order)
     
    
+int PIOc_read_nc_decomp (int iosysid, const char *filename, int *ioid, MPI_Comm comm, int pio_type, char *title, char *history, int *fortran_order)
     
    int PIOc_init_async (MPI_Comm world, int num_io_procs, int *io_proc_list, int component_count, int *num_procs_per_comp, int **proc_list, MPI_Comm *io_comm, MPI_Comm *comp_comm, int rearranger, int *iosysidp)
     Library initialization used when IO tasks are distinct from compute tasks.  More...
     
    
+int PIOc_Init_Intercomm (int component_count, MPI_Comm peer_comm, MPI_Comm *comp_comms, MPI_Comm io_comm, int *iosysidp)
     
    int PIOc_get_numiotasks (int iosysid, int *numiotasks)
     Get the number of IO tasks set.  More...
     
    int PIOc_Init_Intracomm (MPI_Comm comp_comm, int num_iotasks, int stride, int base, int rearr, int *iosysidp)
     Library initialization used when IO tasks are a subset of compute tasks.  More...
     
    int PIOc_finalize (int iosysid)
     Clean up internal data structures, free MPI resources, and exit the pio library.  More...
     
    int PIOc_Set_IOSystem_Error_Handling (int iosysid, int method)
     Set the error handling method used for subsequent calls.  More...
     
    int PIOc_set_iosystem_error_handling (int iosysid, int method, int *old_method)
     Set the error handling method used for subsequent calls for this IO system.  More...
     
    int PIOc_iam_iotask (int iosysid, bool *ioproc)
     Return a logical indicating whether this task is an IO task.  More...
     
    int PIOc_iotask_rank (int iosysid, int *iorank)
     Return the rank of this task in the IO communicator or -1 if this task is not in the communicator.  More...
     
    int PIOc_iosystem_is_active (int iosysid, bool *active)
     Check to see if PIO has been initialized.  More...
     
    int PIOc_iotype_available (int iotype)
     Return true if this iotype is supported in the build, 0 otherwise.  More...
     
    
+int PIOc_set_rearr_opts (int iosysid, int comm_type, int fcd, bool enable_hs_c2i, bool enable_isend_c2i, int max_pend_req_c2i, bool enable_hs_i2c, bool enable_isend_i2c, int max_pend_req_i2c)
     
    int PIOc_advanceframe (int ncid, int varid)
     Increment the unlimited dimension of the given variable.  More...
     
    int PIOc_setframe (int ncid, int varid, int frame)
     Set the unlimited dimension of the given variable.  More...
     
    int PIOc_write_darray (int ncid, int varid, int ioid, PIO_Offset arraylen, void *array, void *fillvalue)
     Write a distributed array to the output file.  More...
     
    int PIOc_write_darray_multi (int ncid, const int *varids, int ioid, int nvars, PIO_Offset arraylen, void *array, const int *frame, void **fillvalue, bool flushtodisk)
     Write one or more arrays with the same IO decomposition to the file.  More...
     
    int PIOc_read_darray (int ncid, int varid, int ioid, PIO_Offset arraylen, void *array)
     Read a field from a file to the IO library.  More...
     
    int PIOc_get_local_array_size (int ioid)
     Get the local size of the variable.  More...
     
    int PIOc_redef (int ncid)
     The PIO-C interface for the NetCDF function nc_redef.  More...
     
    int PIOc_enddef (int ncid)
     The PIO-C interface for the NetCDF function nc_enddef.  More...
     
    int PIOc_sync (int ncid)
     PIO interface to nc_sync This routine is called collectively by all tasks in the communicator ios.union_comm.  More...
     
    int PIOc_deletefile (int iosysid, const char *filename)
     Delete a file.  More...
     
    int PIOc_createfile (int iosysid, int *ncidp, int *iotype, const char *fname, int mode)
     Create a new file using pio.  More...
     
    int PIOc_create (int iosysid, const char *path, int cmode, int *ncidp)
     Open a new file using pio.  More...
     
    int PIOc_openfile (int iosysid, int *ncidp, int *iotype, const char *fname, int mode)
     Open an existing file using PIO library.  More...
     
    int PIOc_openfile2 (int iosysid, int *ncidp, int *iotype, const char *fname, int mode)
     Open an existing file using PIO library.  More...
     
    int PIOc_open (int iosysid, const char *path, int mode, int *ncidp)
     Open an existing file using PIO library.  More...
     
    int PIOc_closefile (int ncid)
     Close a file previously opened with PIO.  More...
     
    int PIOc_inq_format (int ncid, int *formatp)
     Learn the netCDF format of an open file.  More...
     
    int PIOc_inq (int ncid, int *ndimsp, int *nvarsp, int *ngattsp, int *unlimdimidp)
     The PIO-C interface for the NetCDF function nc_inq.  More...
     
    int PIOc_inq_ndims (int ncid, int *ndimsp)
     Find out how many dimensions are defined in the file.  More...
     
    int PIOc_inq_nvars (int ncid, int *nvarsp)
     Find out how many variables are defined in a file.  More...
     
    int PIOc_inq_natts (int ncid, int *ngattsp)
     Find out how many global attributes are defined in a file.  More...
     
    int PIOc_inq_unlimdim (int ncid, int *unlimdimidp)
     Find out the dimension ids of the unlimited dimension.  More...
     
    int PIOc_inq_unlimdims (int ncid, int *nunlimdimsp, int *unlimdimidsp)
     Find out the dimension ids of all unlimited dimensions.  More...
     
    int PIOc_inq_type (int ncid, nc_type xtype, char *name, PIO_Offset *sizep)
     Learn the name and size of a type.  More...
     
    int PIOc_set_blocksize (int newblocksize)
     Set the target blocksize for the box rearranger.  More...
     
    int PIOc_File_is_Open (int ncid)
     Check to see if PIO file is open.  More...
     
    PIO_Offset PIOc_set_buffer_size_limit (PIO_Offset limit)
     Set the PIO IO node data buffer size limit.  More...
     
    int PIOc_Set_File_Error_Handling (int ncid, int method)
     Set the error handling method to be used for subsequent pio library calls, returns the previous method setting.  More...
     
    int PIOc_set_hint (int iosysid, const char *hint, const char *hintval)
     Send a hint to the MPI-IO library.  More...
     
    int PIOc_set_chunk_cache (int iosysid, int iotype, PIO_Offset size, PIO_Offset nelems, float preemption)
     Set chunk cache netCDF files to be opened/created.  More...
     
    int PIOc_get_chunk_cache (int iosysid, int iotype, PIO_Offset *sizep, PIO_Offset *nelemsp, float *preemptionp)
     Get current file chunk cache settings from HDF5.  More...
     
    int PIOc_inq_dim (int ncid, int dimid, char *name, PIO_Offset *lenp)
     The PIO-C interface for the NetCDF function nc_inq_dim.  More...
     
    int PIOc_inq_dimid (int ncid, const char *name, int *idp)
     The PIO-C interface for the NetCDF function nc_inq_dimid.  More...
     
    int PIOc_inq_dimname (int ncid, int dimid, char *name)
     Find the name of a dimension.  More...
     
    int PIOc_inq_dimlen (int ncid, int dimid, PIO_Offset *lenp)
     Find the length of a dimension.  More...
     
    int PIOc_rename_dim (int ncid, int dimid, const char *name)
     The PIO-C interface for the NetCDF function nc_rename_dim.  More...
     
    int PIOc_def_dim (int ncid, const char *name, PIO_Offset len, int *idp)
     The PIO-C interface for the NetCDF function nc_def_dim.  More...
     
    int PIOc_inq_varid (int ncid, const char *name, int *varidp)
     The PIO-C interface for the NetCDF function nc_inq_varid.  More...
     
    int PIOc_inq_var (int ncid, int varid, char *name, nc_type *xtypep, int *ndimsp, int *dimidsp, int *nattsp)
     The PIO-C interface for the NetCDF function nc_inq_var.  More...
     
    int PIOc_inq_varname (int ncid, int varid, char *name)
     Get the name of a variable.  More...
     
    int PIOc_inq_vartype (int ncid, int varid, nc_type *xtypep)
     Find the type of a variable.  More...
     
    int PIOc_inq_varndims (int ncid, int varid, int *ndimsp)
     Find the number of dimensions of a variable.  More...
     
    int PIOc_inq_vardimid (int ncid, int varid, int *dimidsp)
     Find the dimension IDs associated with a variable.  More...
     
    int PIOc_inq_varnatts (int ncid, int varid, int *nattsp)
     Find the number of attributes associated with a variable.  More...
     
    int PIOc_def_var (int ncid, const char *name, nc_type xtype, int ndims, const int *dimidsp, int *varidp)
     The PIO-C interface for the NetCDF function nc_def_var.  More...
     
    int PIOc_set_fill (int ncid, int fillmode, int *old_modep)
     The PIO-C interface for the NetCDF function nc_set_fill.  More...
     
    int PIOc_def_var_fill (int ncid, int varid, int no_fill, const void *fill_value)
     Set the fill value for a variable.  More...
     
    int PIOc_inq_var_fill (int ncid, int varid, int *no_fill, void *fill_valuep)
     The PIO-C interface for the NetCDF function nc_inq_var_fill.  More...
     
    int PIOc_rename_var (int ncid, int varid, const char *name)
     The PIO-C interface for the NetCDF function nc_rename_var.  More...
     
    int PIOc_def_var_deflate (int ncid, int varid, int shuffle, int deflate, int deflate_level)
     Set deflate (zlib) settings for a variable.  More...
     
    int PIOc_inq_var_deflate (int ncid, int varid, int *shufflep, int *deflatep, int *deflate_levelp)
     This function only applies to netCDF-4 files.  More...
     
    
+int PIOc_inq_var_szip (int ncid, int varid, int *options_maskp, int *pixels_per_blockp)
     
    int PIOc_def_var_chunking (int ncid, int varid, int storage, const PIO_Offset *chunksizesp)
     Set chunksizes for a variable.  More...
     
    int PIOc_inq_var_chunking (int ncid, int varid, int *storagep, PIO_Offset *chunksizesp)
     Inquire about chunksizes for a variable.  More...
     
    int PIOc_def_var_endian (int ncid, int varid, int endian)
     Set chunksizes for a variable.  More...
     
    int PIOc_inq_var_endian (int ncid, int varid, int *endianp)
     Inquire about chunksizes for a variable.  More...
     
    int PIOc_set_var_chunk_cache (int ncid, int varid, PIO_Offset size, PIO_Offset nelems, float preemption)
     Set chunksizes for a variable.  More...
     
    int PIOc_get_var_chunk_cache (int ncid, int varid, PIO_Offset *sizep, PIO_Offset *nelemsp, float *preemptionp)
     Get the variable chunk cache settings.  More...
     
    int PIOc_rename_att (int ncid, int varid, const char *name, const char *newname)
     The PIO-C interface for the NetCDF function nc_rename_att.  More...
     
    int PIOc_del_att (int ncid, int varid, const char *name)
     The PIO-C interface for the NetCDF function nc_del_att.  More...
     
    int PIOc_inq_att (int ncid, int varid, const char *name, nc_type *xtypep, PIO_Offset *lenp)
     The PIO-C interface for the NetCDF function nc_inq_att.  More...
     
    int PIOc_inq_attid (int ncid, int varid, const char *name, int *idp)
     The PIO-C interface for the NetCDF function nc_inq_attid.  More...
     
    int PIOc_inq_attlen (int ncid, int varid, const char *name, PIO_Offset *lenp)
     Get the length of an attribute.  More...
     
    int PIOc_inq_atttype (int ncid, int varid, const char *name, nc_type *xtypep)
     Get the type of an attribute.  More...
     
    int PIOc_inq_attname (int ncid, int varid, int attnum, char *name)
     The PIO-C interface for the NetCDF function nc_inq_attname.  More...
     
    int PIOc_put_att (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const void *op)
     Write a netCDF attribute of any type.  More...
     
    int PIOc_put_att_text (int ncid, int varid, const char *name, PIO_Offset len, const char *op)
     Write a netCDF text attribute.  More...
     
    int PIOc_put_att_schar (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const signed char *op)
     Write a netCDF attribute array of 8-bit signed chars.  More...
     
    int PIOc_put_att_short (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const short *op)
     Write a netCDF attribute array of 16-bit integers.  More...
     
    int PIOc_put_att_int (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const int *op)
     Write a netCDF attribute array of 32-bit signed integers.  More...
     
    int PIOc_put_att_long (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const long *op)
     Write a netCDF attribute array of 32-bit signed integers.  More...
     
    int PIOc_put_att_float (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const float *op)
     Write a netCDF attribute array of 32-bit floating points.  More...
     
    int PIOc_put_att_double (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const double *op)
     Write a netCDF attribute array of 64-bit floating points.  More...
     
    int PIOc_put_att_uchar (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned char *op)
     Write a netCDF attribute array of 8-bit unsigned chars.  More...
     
    int PIOc_put_att_ushort (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned short *op)
     Write a netCDF attribute array of 16-bit unsigned integers.  More...
     
    int PIOc_put_att_uint (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned int *op)
     Write a netCDF attribute array of 32-bit unsigned integers.  More...
     
    int PIOc_put_att_longlong (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const long long *op)
     Write a netCDF attribute array of 64-bit signed integers.  More...
     
    int PIOc_put_att_ulonglong (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned long long *op)
     Write a netCDF attribute array of 64-bit unsigned integers.  More...
     
    int PIOc_get_att (int ncid, int varid, const char *name, void *ip)
     Get the value of an attribute of any type, with no type conversion.  More...
     
    int PIOc_get_att_text (int ncid, int varid, const char *name, char *ip)
     Get the value of an text attribute.  More...
     
    int PIOc_get_att_schar (int ncid, int varid, const char *name, signed char *ip)
     Get the value of an 8-bit signed char array attribute.  More...
     
    int PIOc_get_att_short (int ncid, int varid, const char *name, short *ip)
     Get the value of an 16-bit integer array attribute.  More...
     
    int PIOc_get_att_int (int ncid, int varid, const char *name, int *ip)
     Get the value of an 32-bit integer array attribute.  More...
     
    int PIOc_get_att_long (int ncid, int varid, const char *name, long *ip)
     Get the value of an 32-bit ingeger array attribute.  More...
     
    int PIOc_get_att_float (int ncid, int varid, const char *name, float *ip)
     Get the value of an 32-bit floating point array attribute.  More...
     
    int PIOc_get_att_double (int ncid, int varid, const char *name, double *ip)
     Get the value of an 64-bit floating point array attribute.  More...
     
    int PIOc_get_att_uchar (int ncid, int varid, const char *name, unsigned char *ip)
     Get the value of an 8-bit unsigned char array attribute.  More...
     
    int PIOc_get_att_ushort (int ncid, int varid, const char *name, unsigned short *ip)
     Get the value of an 16-bit unsigned integer array attribute.  More...
     
    int PIOc_get_att_uint (int ncid, int varid, const char *name, unsigned int *ip)
     Get the value of an 32-bit unsigned integer array attribute.  More...
     
    int PIOc_get_att_longlong (int ncid, int varid, const char *name, long long *ip)
     Get the value of an 64-bit integer array attribute.  More...
     
    int PIOc_get_att_ulonglong (int ncid, int varid, const char *name, unsigned long long *ip)
     Get the value of an 64-bit unsigned integer array attribute.  More...
     
    int PIOc_get_var (int ncid, int varid, void *buf)
     Get all data from a variable the same type as the variable in the file.  More...
     
    int PIOc_get_var_text (int ncid, int varid, char *buf)
     Get all data of a text variable.  More...
     
    int PIOc_get_var_schar (int ncid, int varid, signed char *buf)
     Get all data of a signed char variable.  More...
     
    int PIOc_get_var_short (int ncid, int varid, short *buf)
     Get all data of a 16-bit integer variable.  More...
     
    int PIOc_get_var_int (int ncid, int varid, int *buf)
     Get all data of an integer variable.  More...
     
    int PIOc_get_var_long (int ncid, int varid, long *buf)
     Get all data of a 64-bit integer variable.  More...
     
    int PIOc_get_var_float (int ncid, int varid, float *buf)
     Get all data of a floating point variable.  More...
     
    int PIOc_get_var_double (int ncid, int varid, double *buf)
     Get all data of a 64-bit floating point variable.  More...
     
    int PIOc_get_var_uchar (int ncid, int varid, unsigned char *buf)
     Get all data of an unsigned char variable.  More...
     
    int PIOc_get_var_ushort (int ncid, int varid, unsigned short *buf)
     Get all data of an unsigned 16-bit integer variable.  More...
     
    int PIOc_get_var_uint (int ncid, int varid, unsigned int *buf)
     Get all data of an unsigned integer variable.  More...
     
    int PIOc_get_var_longlong (int ncid, int varid, long long *buf)
     Get all data of a 64-bit integer variable.  More...
     
    int PIOc_get_var_ulonglong (int ncid, int varid, unsigned long long *buf)
     Get all data of an unsigned 64-bit integer variable.  More...
     
    int PIOc_put_var (int ncid, int varid, const void *buf)
     Put all data to a variable of any type.  More...
     
    int PIOc_put_var_text (int ncid, int varid, const char *op)
     Put all data to a text variable.  More...
     
    int PIOc_put_var_schar (int ncid, int varid, const signed char *op)
     Put all data to a signed char variable.  More...
     
    int PIOc_put_var_short (int ncid, int varid, const short *op)
     Put all data to a 16-bit integer variable.  More...
     
    int PIOc_put_var_int (int ncid, int varid, const int *op)
     Put all data to an integer variable.  More...
     
    int PIOc_put_var_long (int ncid, int varid, const long *op)
     Put all data to an integer variable.  More...
     
    int PIOc_put_var_float (int ncid, int varid, const float *op)
     Put all data to a floating point variable.  More...
     
    int PIOc_put_var_double (int ncid, int varid, const double *op)
     Put all data to a 64-bit floating point variable.  More...
     
    int PIOc_put_var_uchar (int ncid, int varid, const unsigned char *op)
     Put all data to an unsigned char variable.  More...
     
    int PIOc_put_var_ushort (int ncid, int varid, const unsigned short *op)
     Put all data to a 16-bit unsigned integer variable.  More...
     
    int PIOc_put_var_uint (int ncid, int varid, const unsigned int *op)
     Put all data to an unsigned integer variable.  More...
     
    int PIOc_put_var_longlong (int ncid, int varid, const long long *op)
     Put all data to a 64-bit integer variable.  More...
     
    int PIOc_put_var_ulonglong (int ncid, int varid, const unsigned long long *op)
     Put all data to an unsigned 64-bit integer variable.  More...
     
    int PIOc_get_var1 (int ncid, int varid, const PIO_Offset *index, void *buf)
     Get one value from a variable the same type as the variable in the file.  More...
     
    int PIOc_get_var1_text (int ncid, int varid, const PIO_Offset *index, char *buf)
     Get one value of a text variable.  More...
     
    int PIOc_get_var1_schar (int ncid, int varid, const PIO_Offset *index, signed char *buf)
     Get one value of a signed char variable.  More...
     
    int PIOc_get_var1_short (int ncid, int varid, const PIO_Offset *index, short *buf)
     Get one value of a 16-bit integer variable.  More...
     
    int PIOc_get_var1_int (int ncid, int varid, const PIO_Offset *index, int *buf)
     Get one value of an integer variable.  More...
     
    int PIOc_get_var1_long (int ncid, int varid, const PIO_Offset *index, long *buf)
     Get one value of a 64-bit integer variable.  More...
     
    int PIOc_get_var1_float (int ncid, int varid, const PIO_Offset *index, float *buf)
     Get one value of a floating point variable.  More...
     
    int PIOc_get_var1_double (int ncid, int varid, const PIO_Offset *index, double *buf)
     Get one value of a 64-bit floating point variable.  More...
     
    int PIOc_get_var1_uchar (int ncid, int varid, const PIO_Offset *index, unsigned char *buf)
     Get one value of an unsinged char variable.  More...
     
    int PIOc_get_var1_ushort (int ncid, int varid, const PIO_Offset *index, unsigned short *buf)
     Get one value of an unsigned 16-bit integer variable.  More...
     
    int PIOc_get_var1_uint (int ncid, int varid, const PIO_Offset *index, unsigned int *buf)
     Get one value of an unsigned integer variable.  More...
     
    int PIOc_get_var1_longlong (int ncid, int varid, const PIO_Offset *index, long long *buf)
     Get one value of a 64-bit integer variable.  More...
     
    int PIOc_get_var1_ulonglong (int ncid, int varid, const PIO_Offset *index, unsigned long long *buf)
     Get one value of an unsigned 64-bit integer variable.  More...
     
    int PIOc_put_var1 (int ncid, int varid, const PIO_Offset *index, const void *buf)
     Get one value from a variable of any type.  More...
     
    int PIOc_put_var1_text (int ncid, int varid, const PIO_Offset *index, const char *op)
     Get one value from an text variable.  More...
     
    int PIOc_put_var1_schar (int ncid, int varid, const PIO_Offset *index, const signed char *op)
     Get one value from an signed char variable.  More...
     
    int PIOc_put_var1_short (int ncid, int varid, const PIO_Offset *index, const short *op)
     Get one value from a 16-bit integer variable.  More...
     
    int PIOc_put_var1_int (int ncid, int varid, const PIO_Offset *index, const int *op)
     Get one value from an integer variable.  More...
     
    int PIOc_put_var1_long (int ncid, int varid, const PIO_Offset *index, const long *ip)
     Get one value from an integer variable.  More...
     
    int PIOc_put_var1_float (int ncid, int varid, const PIO_Offset *index, const float *op)
     Get one value from an floating point variable.  More...
     
    int PIOc_put_var1_double (int ncid, int varid, const PIO_Offset *index, const double *op)
     Get one value from an 64-bit floating point variable.  More...
     
    int PIOc_put_var1_uchar (int ncid, int varid, const PIO_Offset *index, const unsigned char *op)
     Get one value from an text variable.  More...
     
    int PIOc_put_var1_ushort (int ncid, int varid, const PIO_Offset *index, const unsigned short *op)
     Get one value from an unsigned 16-bit integer variable.  More...
     
    int PIOc_put_var1_uint (int ncid, int varid, const PIO_Offset *index, const unsigned int *op)
     Get one value from an unsigned integer variable.  More...
     
    int PIOc_put_var1_longlong (int ncid, int varid, const PIO_Offset *index, const long long *op)
     Get one value from a 64-bit integer variable.  More...
     
    int PIOc_put_var1_ulonglong (int ncid, int varid, const PIO_Offset *index, const unsigned long long *op)
     Get one value from an unsigned 64-bit integer variable.  More...
     
    int PIOc_get_vara (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, void *buf)
     Get a muti-dimensional subset of a variable the same type as the variable in the file.  More...
     
    int PIOc_get_vara_text (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, char *buf)
     Get a muti-dimensional subset of a text variable.  More...
     
    int PIOc_get_vara_schar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, signed char *buf)
     Get a muti-dimensional subset of a signed char variable.  More...
     
    int PIOc_get_vara_short (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, short *buf)
     Get a muti-dimensional subset of a 16-bit integer variable.  More...
     
    int PIOc_get_vara_int (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, int *buf)
     Get a muti-dimensional subset of an integer variable.  More...
     
    int PIOc_get_vara_float (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, float *buf)
     Get a muti-dimensional subset of a floating point variable.  More...
     
    int PIOc_get_vara_long (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, long *buf)
     Get a muti-dimensional subset of a 64-bit integer variable.  More...
     
    int PIOc_get_vara_double (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, double *buf)
     Get a muti-dimensional subset of a 64-bit floating point variable.  More...
     
    int PIOc_get_vara_uchar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, unsigned char *buf)
     Get a muti-dimensional subset of an unsigned char variable.  More...
     
    int PIOc_get_vara_ushort (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, unsigned short *buf)
     Get a muti-dimensional subset of an unsigned 16-bit integer variable.  More...
     
    int PIOc_get_vara_uint (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, unsigned int *buf)
     Get a muti-dimensional subset of an unsigned integer variable.  More...
     
    int PIOc_get_vara_longlong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, long long *buf)
     Get a muti-dimensional subset of a 64-bit integer variable.  More...
     
    int PIOc_get_vara_ulonglong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, unsigned long long *buf)
     Get a muti-dimensional subset of an unsigned 64-bit integer variable.  More...
     
    int PIOc_put_vara (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const void *buf)
     Put muti-dimensional subset of a variable of any type.  More...
     
    int PIOc_put_vara_text (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const char *op)
     Put muti-dimensional subset of a text variable.  More...
     
    int PIOc_put_vara_schar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const signed char *op)
     Put muti-dimensional subset of a signed char variable.  More...
     
    int PIOc_put_vara_short (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const short *op)
     Put muti-dimensional subset of a 16-bit integer variable.  More...
     
    int PIOc_put_vara_int (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const int *op)
     Put muti-dimensional subset of an integer variable.  More...
     
    int PIOc_put_vara_long (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const long *op)
     Put muti-dimensional subset of an integer variable.  More...
     
    int PIOc_put_vara_float (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const float *op)
     Put muti-dimensional subset of a floating point variable.  More...
     
    int PIOc_put_vara_double (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const double *op)
     Put muti-dimensional subset of a 64-bit integer variable.  More...
     
    int PIOc_put_vara_uchar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const unsigned char *op)
     Put muti-dimensional subset of an unsigned char variable.  More...
     
    int PIOc_put_vara_ushort (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const unsigned short *op)
     Put muti-dimensional subset of an unsigned 16-bit integer variable.  More...
     
    int PIOc_put_vara_uint (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const unsigned int *op)
     Put muti-dimensional subset of an unsigned integer variable.  More...
     
    int PIOc_put_vara_longlong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const long long *op)
     Put muti-dimensional subset of a 64-bit integer variable.  More...
     
    int PIOc_put_vara_ulonglong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const unsigned long long *op)
     Put muti-dimensional subset of an unsigned 64-bit integer variable.  More...
     
    int PIOc_get_vars (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, void *buf)
     Get strided, muti-dimensional subset of a variable of the same type as the variable in the file.  More...
     
    int PIOc_get_vars_text (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, char *buf)
     Get strided, muti-dimensional subset of a text variable.  More...
     
    int PIOc_get_vars_schar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, signed char *buf)
     Get strided, muti-dimensional subset of a signed char variable.  More...
     
    int PIOc_get_vars_short (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, short *buf)
     Get strided, muti-dimensional subset of a 16-bit integer variable.  More...
     
    int PIOc_get_vars_int (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, int *buf)
     Get strided, muti-dimensional subset of an integer variable.  More...
     
    int PIOc_get_vars_long (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, long *buf)
     Get strided, muti-dimensional subset of a 64-bit int variable.  More...
     
    int PIOc_get_vars_float (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, float *buf)
     Get strided, muti-dimensional subset of a floating point variable.  More...
     
    int PIOc_get_vars_double (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, double *buf)
     Get strided, muti-dimensional subset of a 64-bit floating point variable.  More...
     
    int PIOc_get_vars_uchar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, unsigned char *buf)
     Get strided, muti-dimensional subset of an unsigned char variable.  More...
     
    int PIOc_get_vars_ushort (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, unsigned short *buf)
     Get strided, muti-dimensional subset of an unsigned 16-bit integer variable.  More...
     
    int PIOc_get_vars_uint (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, unsigned int *buf)
     Get strided, muti-dimensional subset of an unsigned integer variable.  More...
     
    int PIOc_get_vars_longlong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, long long *buf)
     Get strided, muti-dimensional subset of a 64-bit int variable.  More...
     
    int PIOc_get_vars_ulonglong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, unsigned long long *buf)
     Get strided, muti-dimensional subset of an unsigned 64-bit int variable.  More...
     
    int PIOc_put_vars (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const void *buf)
     Write strided, muti-dimensional subset of a variable of any type.  More...
     
    int PIOc_put_vars_text (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const char *op)
     Get strided, muti-dimensional subset of a text variable.  More...
     
    int PIOc_put_vars_schar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const signed char *op)
     Get strided, muti-dimensional subset of a signed char variable.  More...
     
    int PIOc_put_vars_short (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const short *op)
     Get strided, muti-dimensional subset of a 16-bit integer variable.  More...
     
    int PIOc_put_vars_int (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const int *op)
     Get strided, muti-dimensional subset of an integer variable.  More...
     
    int PIOc_put_vars_float (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const float *op)
     Get strided, muti-dimensional subset of a floating point variable.  More...
     
    int PIOc_put_vars_double (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const double *op)
     Get strided, muti-dimensional subset of a 64-bit floating point variable.  More...
     
    int PIOc_put_vars_long (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const long *op)
     Get strided, muti-dimensional subset of a 64-bit integer variable.  More...
     
    int PIOc_put_vars_uchar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const unsigned char *op)
     Get strided, muti-dimensional subset of an unsigned char variable.  More...
     
    int PIOc_put_vars_ushort (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const unsigned short *op)
     Get strided, muti-dimensional subset of an unsigned 16-bit integer variable.  More...
     
    int PIOc_put_vars_uint (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const unsigned int *op)
     Get strided, muti-dimensional subset of an unsigned integer variable.  More...
     
    int PIOc_put_vars_longlong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const long long *op)
     Get strided, muti-dimensional subset of a 64-bit unsigned integer variable.  More...
     
    int PIOc_put_vars_ulonglong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const unsigned long long *op)
     Get strided, muti-dimensional subset of an unsigned 64-bit integer variable.  More...
     
    
+
    Detailed Description
    
+
    Public headers for the PIO C interface. 
    
+
    Author
    Jim Edwards 
    
+
    Date
    2014
    
+
    See also
    http://code.google.com/p/parallelio/ 
    
+
    Macro Definition Documentation
    
+
+
    ◆ DECOMP_VERSION_ATT_NAME
    
+
+
    
+
    
+      
+        
+          
+        
+      
    #define DECOMP_VERSION_ATT_NAME   "PIO_library_version"
    
+
    
+
+
    Used in the decomposition netCDF file. 
    
+
+
    
+
    
+
+
    ◆ MPI_OFFSET
    
+
+
    
+
    
+      
+        
+          
+        
+      
    #define MPI_OFFSET   MPI_LONG_LONG
    
+
    
+
+
    MPI_OFFSET is an integer type of size sufficient to represent the size (in bytes) of the largest file supported by MPI. 
    
+
    In some MPI implementations MPI_OFFSET is not properly defined. 
    
+
+
    
+
    
+
+
    ◆ PIO_DEFAULT
    
+
+
    
+
    
+      
+        
+          
+        
+      
    #define PIO_DEFAULT   (-1)
    
+
    
+
+
    Pass this to PIOc_set_iosystem_error_handling() as the iosysid in order to set default error handling. 
    
+
+
    
+
    
+
+
    ◆ PIO_EINDEP
    
+
+
    
+
    
+      
+        
+          
+        
+      
    #define PIO_EINDEP   (-203)
    
+
    
+
+
    Define the extra error codes for the parallel-netcdf library. 
    
+
+
    
+
    
+
+
    ◆ PIO_FIRST_ERROR_CODE
    
+
+
    
+
    
+      
+        
+          
+        
+      
    #define PIO_FIRST_ERROR_CODE   (-500)
    
+
    
+
+
    Define error codes for PIO. 
    
+
+
    
+
    
+
+
    ◆ PIO_MAX_DIMS
    
+
+
    
+
    
+      
+        
+          
+        
+      
    #define PIO_MAX_DIMS   NC_MAX_DIMS
    
+
    
+
+
    The maximum number of dimensions allowed in a netCDF file. 
    
+
+
    
+
    
+
+
    ◆ PIO_MAX_VARS
    
+
+
    
+
    
+      
+        
+          
+        
+      
    #define PIO_MAX_VARS   NC_MAX_VARS
    
+
    
+
+
    The maximum number of variables allowed in a netCDF file. 
    
+
+
    
+
    
+
+
    ◆ PIO_OFFSET
    
+
+
    
+
    
+      
+        
+          
+        
+      
    #define PIO_OFFSET   MPI_OFFSET
    
+
    
+
+
    PIO_OFFSET is an integer type of size sufficient to represent the size (in bytes) of the largest file supported by MPI. 
    
+
+
    
+
    
+
    Typedef Documentation
    
+
+
    ◆ file_desc_t
    
+
+
    
+
    
+      
+        
+          
+        
+      
    typedef struct file_desc_t  file_desc_t
    
+
    
+
+
    File descriptor structure. 
    
+
    This structure holds information associated with each open file 
    
+
+
    
+
    
+
+
    ◆ io_desc_t
    
+
+
    
+
    
+      
+        
+          
+        
+      
    typedef struct io_desc_t  io_desc_t
    
+
    
+
+
    IO descriptor structure. 
    
+
    This structure defines the mapping for a given variable between compute and IO decomposition. 
    
+
+
    
+
    
+
+
    ◆ io_region
    
+
+
    
+
    
+      
+        
+          
+        
+      
    typedef struct io_region  io_region
    
+
    
+
+
    IO region structure. 
    
+
    Each IO region is a unit of data which can be described using start and count arrays. Each IO task may in general have multiple io regions per variable. The box rearranger will have at most one io region per variable.
    
+
    The write from a particular IO task is divided into 1 or more regions each of which can be described using start and count. The io_region typedef is a linked list of those regions. 
    
+
+
    
+
    
+
+
    ◆ iosystem_desc_t
    
+
+
    
+
    
+      
+        
+          
+        
+      
    typedef struct iosystem_desc_t  iosystem_desc_t
    
+
    
+
+
    IO system descriptor structure. 
    
+
    This structure contains the general IO subsystem data and MPI structure 
    
+
+
    
+
    
+
+
    ◆ wmulti_buffer
    
+
+
    
+
    
+      
+        
+          
+        
+      
    typedef struct wmulti_buffer  wmulti_buffer
    
+
    
+
+
    The multi buffer holds data from one or more variables. 
    
+
    Data are accumulated in the multi-buffer. 
    
+
+
    
+
    
+
    Enumeration Type Documentation
    
+
+
    ◆ PIO_ERROR_HANDLERS
    
+
+
    
+
    
+      
+        
+          
+        
+      
    enum PIO_ERROR_HANDLERS
    
+
    
+
+
    These are the supported error handlers. 
    
+
+
+
+
+
    Enumerator
    PIO_INTERNAL_ERROR 
    Errors cause abort. 
    
+
    PIO_BCAST_ERROR 
    Error codes are broadcast to all tasks. 
    
+
    PIO_RETURN_ERROR 
    Errors are returned to caller with no internal action. 
    
+
    
+
+
    
+
    
+
+
    ◆ PIO_IOTYPE
    
+
+
    
+
    
+      
+        
+          
+        
+      
    enum PIO_IOTYPE
    
+
    
+
+
    These are the supported methods of reading/writing netCDF files. 
    
+
    (Not all methods can be used with all netCDF files.) 
    
+
+
+
+
+
+
    Enumerator
    PIO_IOTYPE_PNETCDF 
    Parallel Netcdf (parallel) 
    
+
    PIO_IOTYPE_NETCDF 
    Netcdf3 Classic format (serial) 
    
+
    PIO_IOTYPE_NETCDF4C 
    NetCDF4 (HDF5) compressed format (serial) 
    
+
    PIO_IOTYPE_NETCDF4P 
    NetCDF4 (HDF5) parallel. 
    
+
    
+
+
    
+
    
+
+
    ◆ PIO_REARR_COMM_FC_DIR
    
+
+
    
+
    
+      
+        
+          
+        
+      
    enum PIO_REARR_COMM_FC_DIR
    
+
    
+
+
    Rearranger comm flow control direction. 
    
+
    The rearranger option values must match the definitions in the fortran interface. 
    
+
+
+
+
+
+
    Enumerator
    PIO_REARR_COMM_FC_2D_ENABLE 
    Comp procs to io procs and vice versa. 
    
+
    PIO_REARR_COMM_FC_1D_COMP2IO 
    Comp procs to io procs only. 
    
+
    PIO_REARR_COMM_FC_1D_IO2COMP 
    IO procs to comp procs only. 
    
+
    PIO_REARR_COMM_FC_2D_DISABLE 
    Disable flow control. 
    
+
    
+
+
    
+
    
+
+
    ◆ PIO_REARR_COMM_TYPE
    
+
+
    
+
    
+      
+        
+          
+        
+      
    enum PIO_REARR_COMM_TYPE
    
+
    
+
+
    Rearranger comm type. 
    
+
    The rearranger option values must match the definitions in the fortran interface. 
    
+
+
+
+
    Enumerator
    PIO_REARR_COMM_P2P 
    Point to point. 
    
+
    PIO_REARR_COMM_COLL 
    Collective. 
    
+
    
+
+
    
+
    
+
+
    ◆ PIO_REARRANGERS
    
+
+
    
+
    
+      
+        
+          
+        
+      
    enum PIO_REARRANGERS
    
+
    
+
+
    These are the supported output data rearrangement methods. 
    
+
+
+
+
    Enumerator
    PIO_REARR_BOX 
    Box rearranger. 
    
+
    PIO_REARR_SUBSET 
    Subset rearranger. 
    
+
    
+
+
    
+
    
+
    Function Documentation
    
+
+
    ◆ PIOc_advanceframe()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_advanceframe (int ncid, 
    int varid 
    )
    
+
    
+
+
    Increment the unlimited dimension of the given variable. 
    
+
    Parameters
    
+  
+    
+    
+  
    ncidthe ncid of the open file 
    varidthe variable ID 
    
+  
    
+
    
+
    Returns
    0 on success, error code otherwise 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_closefile()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+          
+        
+      
    int PIOc_closefile (int ncid)
    
+
    
+
+
    Close a file previously opened with PIO. 
    
+
    Parameters
    
+  
+    
+  
    ncidthe file pointer 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_create()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_create (int iosysid, 
    const char * filename, 
    int cmode, 
    int * ncidp 
    )
    
+
    
+
+
    Open a new file using pio. 
    
+
    The default fill mode will be used (FILL for netCDF and netCDF-4 formats, NOFILL for pnetcdf.) Input parameters are read on comp task 0 and ignored elsewhere.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    iosysid: A defined pio system descriptor (input) 
    cmode: The netcdf mode for the create operation. 
    filename: The filename to open 
    ncidp: A pio file descriptor (output) 
    
+  
    
+
    
+
    Returns
    0 for success, error code otherwise.
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_del_att()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_del_att (int ncid, 
    int varid, 
    const char * name 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_del_att. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__attributes.html
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    varidthe variable ID. 
    nameof the attribute to delete. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_deletefile()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_deletefile (int iosysid, 
    const char * filename 
    )
    
+
    
+
+
    Delete a file. 
    
+
    Parameters
    
+  
+    
+    
+  
    iosysida pio system handle. 
    filenamea filename. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_File_is_Open()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+          
+        
+      
    int PIOc_File_is_Open (int ncid)
    
+
    
+
+
    Check to see if PIO file is open. 
    
+
    Parameters
    
+  
+    
+  
    ncidthe ncid of an open file 
    
+  
    
+
    
+
    Returns
    1 if file is open, 0 otherwise. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_local_array_size()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+          
+        
+      
    int PIOc_get_local_array_size (int ioid)
    
+
    
+
+
    Get the local size of the variable. 
    
+
    Parameters
    
+  
+    
+  
    ioidIO descrption ID. 
    
+  
    
+
    
+
    Returns
    the size of the array. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_numiotasks()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_numiotasks (int iosysid, 
    int * numiotasks 
    )
    
+
    
+
+
    Get the number of IO tasks set. 
    
+
    Parameters
    
+  
+    
+    
+  
    iosysidthe IO system ID 
    numiotasksa pointer taht gets the number of IO tasks. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    0 on success, error code otherwise 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var (int ncid, 
    int varid, 
    void * buf 
    )
    
+
    
+
+
    Get all data from a variable the same type as the variable in the file. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1 (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    void * buf 
    )
    
+
    
+
+
    Get one value from a variable the same type as the variable in the file. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_double (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    double * buf 
    )
    
+
    
+
+
    Get one value of a 64-bit floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_float (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    float * buf 
    )
    
+
    
+
+
    Get one value of a floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_int (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    int * buf 
    )
    
+
    
+
+
    Get one value of an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_long (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    long * buf 
    )
    
+
    
+
+
    Get one value of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_longlong (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    long long * buf 
    )
    
+
    
+
+
    Get one value of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_schar (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    signed char * buf 
    )
    
+
    
+
+
    Get one value of a signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_short (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    short * buf 
    )
    
+
    
+
+
    Get one value of a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_text (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    char * buf 
    )
    
+
    
+
+
    Get one value of a text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_uchar (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    unsigned char * buf 
    )
    
+
    
+
+
    Get one value of an unsinged char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_uint (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    unsigned int * buf 
    )
    
+
    
+
+
    Get one value of an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_ulonglong (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    unsigned long long * buf 
    )
    
+
    
+
+
    Get one value of an unsigned 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_ushort (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    unsigned short * buf 
    )
    
+
    
+
+
    Get one value of an unsigned 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_chunk_cache()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_chunk_cache (int ncid, 
    int varid, 
    PIO_Offset * sizep, 
    PIO_Offset * nelemsp, 
    float * preemptionp 
    )
    
+
    
+
+
    Get the variable chunk cache settings. 
    
+
    This function only applies to netCDF-4 files. When used with netCDF classic files, the error PIO_ENOTNC4 will be returned.
    
+
    Note that these settings are not part of the data file - they apply only to the open file as long as it is open.
    
+
    See the netCDF variable documentation for details about the operation of this function.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncidthe ncid of the open file. 
    varidthe ID of the variable to set chunksizes for. 
    sizepwill get the size of the cache in bytes. Ignored if NULL. 
    nelemspwill get the number of elements in the cache. Ignored if NULL. 
    preemptionpwill get the cache preemption value. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, otherwise an error code.
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_double (int ncid, 
    int varid, 
    double * buf 
    )
    
+
    
+
+
    Get all data of a 64-bit floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_float (int ncid, 
    int varid, 
    float * buf 
    )
    
+
    
+
+
    Get all data of a floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_int (int ncid, 
    int varid, 
    int * buf 
    )
    
+
    
+
+
    Get all data of an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_long (int ncid, 
    int varid, 
    long * buf 
    )
    
+
    
+
+
    Get all data of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_longlong (int ncid, 
    int varid, 
    long long * buf 
    )
    
+
    
+
+
    Get all data of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_schar (int ncid, 
    int varid, 
    signed char * buf 
    )
    
+
    
+
+
    Get all data of a signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_short (int ncid, 
    int varid, 
    short * buf 
    )
    
+
    
+
+
    Get all data of a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_text (int ncid, 
    int varid, 
    char * buf 
    )
    
+
    
+
+
    Get all data of a text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_uchar (int ncid, 
    int varid, 
    unsigned char * buf 
    )
    
+
    
+
+
    Get all data of an unsigned char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_uint (int ncid, 
    int varid, 
    unsigned int * buf 
    )
    
+
    
+
+
    Get all data of an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_ulonglong (int ncid, 
    int varid, 
    unsigned long long * buf 
    )
    
+
    
+
+
    Get all data of an unsigned 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_ushort (int ncid, 
    int varid, 
    unsigned short * buf 
    )
    
+
    
+
+
    Get all data of an unsigned 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    void * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a variable the same type as the variable in the file. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_double (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    double * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a 64-bit floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_float (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    float * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_int (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    int * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_long (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    long * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_longlong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    long long * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_schar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    signed char * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_short (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    short * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_text (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    char * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_uchar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    unsigned char * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of an unsigned char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_uint (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    unsigned int * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_ulonglong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    unsigned long long * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of an unsigned 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_ushort (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    unsigned short * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of an unsigned 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    void * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a variable of the same type as the variable in the file. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_double (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    double * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 64-bit floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_float (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    float * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_int (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    int * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_long (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    long * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 64-bit int variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_longlong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    long long * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 64-bit int variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_schar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    signed char * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_short (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    short * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_text (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    char * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_uchar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    unsigned char * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_uint (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    unsigned int * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_ulonglong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    unsigned long long * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned 64-bit int variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_ushort (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    unsigned short * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_iam_iotask()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_iam_iotask (int iosysid, 
    bool * ioproc 
    )
    
+
    
+
+
    Return a logical indicating whether this task is an IO task. 
    
+
    Parameters
    
+  
+    
+    
+  
    iosysidthe io system ID 
    ioproca pointer that gets 1 if task is an IO task, 0 otherwise. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    0 for success, or PIO_BADID if iosysid can't be found. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_inq (int ncid, 
    int * ndimsp, 
    int * nvarsp, 
    int * ngattsp, 
    int * unlimdimidp 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_inq. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__datasets.html
    
+
    Parameters
    
+  
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile().
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. See PIOc_Set_File_Error_Handling 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_attid()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_inq_attid (int ncid, 
    int varid, 
    const char * name, 
    int * idp 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_inq_attid. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__attributes.html
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    varidthe variable ID. 
    idpa pointer that will get the id of the variable or attribute. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. See PIOc_Set_File_Error_Handling 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_atttype()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_inq_atttype (int ncid, 
    int varid, 
    const char * name, 
    nc_type * xtypep 
    )
    
+
    
+
+
    Get the type of an attribute. 
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncidthe ID of an open file. 
    varidthe variable ID, or NC_GLOBAL for global attributes. 
    namethe name of the attribute. 
    xtypepa pointer that gets the type of the attribute. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_dim()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_inq_dim (int ncid, 
    int dimid, 
    char * name, 
    PIO_Offset * lenp 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_inq_dim. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__dimensions.html
    
+
    Parameters
    
+  
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    lenpa pointer that will get the number of values 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. See PIOc_Set_File_Error_Handling 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_format()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_inq_format (int ncid, 
    int * formatp 
    )
    
+
    
+
+
    Learn the netCDF format of an open file. 
    
+
    Parameters
    
+  
+    
+    
+  
    ncidthe ncid of an open file. 
    formatpa pointer that will get the format. 
    
+  
    
+
    
+
    Returns
    0 for success, error code otherwise. 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_type()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_inq_type (int ncid, 
    nc_type xtype, 
    char * name, 
    PIO_Offset * sizep 
    )
    
+
    
+
+
    Learn the name and size of a type. 
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncidthe ncid of the open file. 
    xtypethe type to learn about 
    namepointer that will get the name of the type. 
    sizeppointer that will get the size of the type in bytes. 
    
+  
    
+
    
+
    Returns
    0 for success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_var()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_inq_var (int ncid, 
    int varid, 
    char * name, 
    nc_type * xtypep, 
    int * ndimsp, 
    int * dimidsp, 
    int * nattsp 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_inq_var. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__variables.html
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    varidthe variable ID. 
    xtypepa pointer that will get the type of the attribute. 
    nattspa pointer that will get the number of attributes 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_var_chunking()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_inq_var_chunking (int ncid, 
    int varid, 
    int * storagep, 
    PIO_Offset * chunksizesp 
    )
    
+
    
+
+
    Inquire about chunksizes for a variable. 
    
+
    This function only applies to netCDF-4 files. When used with netCDF classic files, the error PIO_ENOTNC4 will be returned.
    
+
    See the netCDF variable documentation for details about the operation of this function.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncidthe ncid of the open file. 
    varidthe ID of the variable to set chunksizes for. 
    storageppointer to int which will be set to either NC_CONTIGUOUS or NC_CHUNKED. 
    chunksizeppointer to memory where chunksizes will be set. There are the same number of chunksizes as there are dimensions. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, otherwise an error code.
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_var_deflate()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_inq_var_deflate (int ncid, 
    int varid, 
    int * shufflep, 
    int * deflatep, 
    int * deflate_levelp 
    )
    
+
    
+
+
    This function only applies to netCDF-4 files. 
    
+
    When used with netCDF classic files, the error PIO_ENOTNC4 will be returned.
    
+
    Inquire about deflate (zlib compression) settings for a variable.
    
+
    See the netCDF variable documentation for details about the operation of this function.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncidthe ncid of the open file. 
    varidthe ID of the variable to set chunksizes for. 
    shuffleppointer to an int that will get the status of the shuffle filter. Ignored if NULL. 
    deflateppointer to an int that will be set to non-zero if deflation is in use for this variable. Ignored if NULL. 
    deflate_levelppointer to an int that will get the deflation level (from 1-9) if deflation is in use for this variable. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, otherwise an error code.
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_var_endian()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_inq_var_endian (int ncid, 
    int varid, 
    int * endianp 
    )
    
+
    
+
+
    Inquire about chunksizes for a variable. 
    
+
    This function only applies to netCDF-4 files. When used with netCDF classic files, the error PIO_ENOTNC4 will be returned.
    
+
    See the netCDF variable documentation for details about the operation of this function.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncidthe ncid of the open file. 
    varidthe ID of the variable to set chunksizes for. 
    endianppointer to int which will be set to endianness. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, otherwise an error code.
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_var_fill()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_inq_var_fill (int ncid, 
    int varid, 
    int * no_fill, 
    void * fill_valuep 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_inq_var_fill. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__variables.html
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    varidthe variable ID. 
    no_filla pointer to int that will get the fill mode. Ignored if NULL (except with pnetcdf, which seg-faults with NULL.) 
    fill_valueppointer to space that gets the fill value for this variable. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise.
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_iosystem_is_active()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_iosystem_is_active (int iosysid, 
    bool * active 
    )
    
+
    
+
+
    Check to see if PIO has been initialized. 
    
+
    Parameters
    
+  
+    
+    
+  
    iosysidthe IO system ID 
    activepointer that gets true if IO system is active, false otherwise. 
    
+  
    
+
    
+
    Returns
    0 on success, error code otherwise 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ PIOc_iotask_rank()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_iotask_rank (int iosysid, 
    int * iorank 
    )
    
+
    
+
+
    Return the rank of this task in the IO communicator or -1 if this task is not in the communicator. 
    
+
    Parameters
    
+  
+    
+    
+  
    iosysidthe io system ID 
    ioranka pointer that gets the io rank, or -1 if task is not in the IO communicator. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    0 for success, or PIO_BADID if iosysid can't be found. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ PIOc_iotype_available()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+          
+        
+      
    int PIOc_iotype_available (int iotype)
    
+
    
+
+
    Return true if this iotype is supported in the build, 0 otherwise. 
    
+
    Parameters
    
+  
+    
+  
    iotypethe io type to check 
    
+  
    
+
    
+
    Returns
    1 if iotype is in build, 0 if not. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var (int ncid, 
    int varid, 
    const void * op 
    )
    
+
    
+
+
    Put all data to a variable of any type. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1 (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const void * op 
    )
    
+
    
+
+
    Get one value from a variable of any type. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_double (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const double * op 
    )
    
+
    
+
+
    Get one value from an 64-bit floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_float (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const float * op 
    )
    
+
    
+
+
    Get one value from an floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_int (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const int * op 
    )
    
+
    
+
+
    Get one value from an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_long (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const long * op 
    )
    
+
    
+
+
    Get one value from an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_longlong (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const long long * op 
    )
    
+
    
+
+
    Get one value from a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_schar (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const signed char * op 
    )
    
+
    
+
+
    Get one value from an signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_short (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const short * op 
    )
    
+
    
+
+
    Get one value from a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_text (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const char * op 
    )
    
+
    
+
+
    Get one value from an text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_uchar (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const unsigned char * op 
    )
    
+
    
+
+
    Get one value from an text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_uint (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const unsigned int * op 
    )
    
+
    
+
+
    Get one value from an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_ulonglong (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const unsigned long long * op 
    )
    
+
    
+
+
    Get one value from an unsigned 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_ushort (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const unsigned short * op 
    )
    
+
    
+
+
    Get one value from an unsigned 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_double (int ncid, 
    int varid, 
    const double * op 
    )
    
+
    
+
+
    Put all data to a 64-bit floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_float (int ncid, 
    int varid, 
    const float * op 
    )
    
+
    
+
+
    Put all data to a floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_int (int ncid, 
    int varid, 
    const int * op 
    )
    
+
    
+
+
    Put all data to an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_long (int ncid, 
    int varid, 
    const long * op 
    )
    
+
    
+
+
    Put all data to an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_longlong (int ncid, 
    int varid, 
    const long long * op 
    )
    
+
    
+
+
    Put all data to a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_schar (int ncid, 
    int varid, 
    const signed char * op 
    )
    
+
    
+
+
    Put all data to a signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_short (int ncid, 
    int varid, 
    const short * op 
    )
    
+
    
+
+
    Put all data to a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_text (int ncid, 
    int varid, 
    const char * op 
    )
    
+
    
+
+
    Put all data to a text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_uchar (int ncid, 
    int varid, 
    const unsigned char * op 
    )
    
+
    
+
+
    Put all data to an unsigned char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_uint (int ncid, 
    int varid, 
    const unsigned int * op 
    )
    
+
    
+
+
    Put all data to an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_ulonglong (int ncid, 
    int varid, 
    const unsigned long long * op 
    )
    
+
    
+
+
    Put all data to an unsigned 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_ushort (int ncid, 
    int varid, 
    const unsigned short * op 
    )
    
+
    
+
+
    Put all data to a 16-bit unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const void * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of a variable of any type. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_double (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const double * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_float (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const float * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of a floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_int (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const int * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_long (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const long * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_longlong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const long long * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_schar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const signed char * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of a signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_short (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const short * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_text (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const char * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of a text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_uchar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const unsigned char * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of an unsigned char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_uint (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const unsigned int * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_ulonglong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const unsigned long long * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of an unsigned 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_ushort (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const unsigned short * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of an unsigned 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const void * op 
    )
    
+
    
+
+
    Write strided, muti-dimensional subset of a variable of any type. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_double (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const double * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 64-bit floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_float (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const float * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_int (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const int * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_long (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const long * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_longlong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const long long * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 64-bit unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_schar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const signed char * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_short (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const short * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_text (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const char * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_uchar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const unsigned char * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_uint (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const unsigned int * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_ulonglong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const unsigned long long * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_ushort (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const unsigned short * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_rename_att()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_rename_att (int ncid, 
    int varid, 
    const char * name, 
    const char * newname 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_rename_att. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__attributes.html
    
+
    Parameters
    
+  
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    varidthe variable ID. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. See PIOc_Set_File_Error_Handling 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_rename_dim()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_rename_dim (int ncid, 
    int dimid, 
    const char * name 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_rename_dim. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__dimensions.html
    
+
    Parameters
    
+  
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. See PIOc_Set_File_Error_Handling 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_rename_var()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_rename_var (int ncid, 
    int varid, 
    const char * name 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_rename_var. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__variables.html
    
+
    Parameters
    
+  
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    varidthe variable ID. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. See PIOc_Set_File_Error_Handling 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_set_buffer_size_limit()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+          
+        
+      
    PIO_Offset PIOc_set_buffer_size_limit (PIO_Offset limit)
    
+
    
+
+
    Set the PIO IO node data buffer size limit. 
    
+
    The pio_buffer_size_limit will only apply to files opened after the setting is changed.
    
+
    Parameters
    
+  
+    
+  
    limitthe size of the buffer on the IO nodes 
    
+  
    
+
    
+
    Returns
    The previous limit setting. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ PIOc_set_fill()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_set_fill (int ncid, 
    int fillmode, 
    int * old_modep 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_set_fill. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__datasets.html
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    fillmodeeither NC_FILL or NC_NOFILL. 
    old_modepa pointer to an int that gets the old setting. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise.
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_set_hint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_set_hint (int iosysid, 
    const char * hint, 
    const char * hintval 
    )
    
+
    
+
+
    Send a hint to the MPI-IO library. 
    
+
    Parameters
    
+  
+    
+    
+    
+  
    iosysidthe IO system ID 
    hintthe hint for MPI 
    hintvalthe value of the hint 
    
+  
    
+
    
+
    Returns
    0 for success, or PIO_BADID if iosysid can't be found. 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_sync()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+          
+        
+      
    int PIOc_sync (int ncid)
    
+
    
+
+
    PIO interface to nc_sync This routine is called collectively by all tasks in the communicator ios.union_comm. 
    
+
    Refer to the netcdf  documentation.
    
+
    Parameters
    
+  
+    
+  
    ncidthe ncid of the file to sync. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:07 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pio_8h__dep__incl.map b/docs/pio_8h__dep__incl.map
new file mode 100644
index 00000000000..46ff742d634
--- /dev/null
+++ b/docs/pio_8h__dep__incl.map
@@ -0,0 +1,13 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
diff --git a/docs/pio_8h__dep__incl.md5 b/docs/pio_8h__dep__incl.md5
new file mode 100644
index 00000000000..abbc9e8ad1a
--- /dev/null
+++ b/docs/pio_8h__dep__incl.md5
@@ -0,0 +1 @@
+87aeff0dd3e3b0739d46e379ee148291
\ No newline at end of file
diff --git a/docs/pio_8h__dep__incl.png b/docs/pio_8h__dep__incl.png
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+PIO: pio.h Source File
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+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
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+  
    
+
    pio.h
      
    
+
    
+
    
+Go to the documentation of this file.
        1 
       10 #ifndef _PIO_H_
       11 #define _PIO_H_
       12 #include <stdio.h>
       13 #include <stdlib.h>
       14 #include <stdbool.h>
       15 #include <string.h> /* memcpy */
       16 #include <mpi.h>
       17 
       18 #ifdef _NETCDF
       19 #include <netcdf.h>
       20 #ifdef _NETCDF4
       21 #include <netcdf_par.h>
       22 #endif
       23 #endif
       24 #ifdef _PNETCDF
       25 #include <pnetcdf.h>
       26 #endif
       27 
       28 #ifndef MPI_OFFSET
       29 
       32 #define MPI_OFFSET  MPI_LONG_LONG
       33 #endif
       34 
       37 #define PIO_OFFSET MPI_OFFSET
       38 #define PIO_Offset MPI_Offset
       39 
       41 #define PIO_MAX_VARS NC_MAX_VARS
       42 
       44 #define PIO_MAX_DIMS NC_MAX_DIMS
       45 
       48 #define PIO_DEFAULT (-1)
       49 
       52 /* Holds the version of the decomposition file. */
       53 #define DECOMP_VERSION_ATT_NAME "PIO_library_version"
       54 
       55 /* Holds the maximum length of any task map. */
       56 #define DECOMP_MAX_MAPLEN_ATT_NAME "max_maplen"
       57 
       58 /* Name of title attribute. */
       59 #define DECOMP_TITLE_ATT_NAME "title"
       60 
       61 /* Name of history attribute. */
       62 #define DECOMP_HISTORY_ATT_NAME "history"
       63 
       64 /* Name of source attribute. */
       65 #define DECOMP_SOURCE_ATT_NAME "source"
       66 
       67 /* Name of array order (C or Fortran) attribute. */
       68 #define DECOMP_ORDER_ATT_NAME "array_order"
       69 
       70 /* Name of backtrace attribute. */
       71 #define DECOMP_BACKTRACE_ATT_NAME "backtrace"
       72 
       73 /* Name for the dim dim in decomp file. */
       74 #define DECOMP_DIM_DIM "dims"
       75 
       76 /* Name for the npes dim in decomp file. */
       77 #define DECOMP_TASK_DIM_NAME "task"
       78 
       79 /* Name for the npes dim in decomp file. */
       80 #define DECOMP_MAPELEM_DIM_NAME "map_element"
       81 
       82 #define DECOMP_NDIMS "ndims"
       83 
       84 /* Name of var in decomp file that holds global array sizes. */
       85 #define DECOMP_GLOBAL_SIZE_VAR_NAME "global_size"
       86 
       87 /* Name of var in decomp file that holds the length of the map for
       88  * each task. */
       89 #define DECOMP_MAPLEN_VAR_NAME "maplen"
       90 
       91 /* Name of var in decomp file that holds map. */
       92 #define DECOMP_MAP_VAR_NAME "map"
       93 
       94 /* String used to indicate a decomposition file is in C
       95  * array-order. */
       96 #define DECOMP_C_ORDER_STR "C"
       97 
       98 /* String used to indicate a decomposition file is in Fortran
       99  * array-order. */
      100 #define DECOMP_FORTRAN_ORDER_STR "Fortran"
      101 
      102 
      106 typedef struct var_desc_t
      107 {
      108     /* Variable ID. */
      109     int varid;
      110 
      111     /* Non-zero if this is a record var (i.e. uses unlimited
      112      * dimension). */
      113     int rec_var;
      114 
      117     int record;
      118 
      120     int *request;
      121 
      123     int nreqs;
      124 
      125     /* Holds the fill value of this var. */
      126     void *fillvalue;
      127 
      129     int use_fill;
      130 
      133     void *fillbuf;
      134 
      136     int pio_type;
      137 
      139     int pio_type_size;
      140 
      142     MPI_Datatype mpi_type;
      143 
      145     int mpi_type_size;
      146 
      148     struct var_desc_t *next;
      149 } var_desc_t;
      150 
      163 typedef struct io_region
      164 {
      167     int loffset;
      168 
      170     PIO_Offset *start;
      171 
      173     PIO_Offset *count;
      174 
      176     struct io_region *next;
      177 } io_region;
      178 
      183 enum PIO_REARR_COMM_TYPE
      184 {
      186     PIO_REARR_COMM_P2P = (0),
      187 
      189     PIO_REARR_COMM_COLL
      190 };
      191 
      196 enum PIO_REARR_COMM_FC_DIR
      197 {
      199     PIO_REARR_COMM_FC_2D_ENABLE = (0),
      200 
      202     PIO_REARR_COMM_FC_1D_COMP2IO,
      203 
      205     PIO_REARR_COMM_FC_1D_IO2COMP,
      206 
      208     PIO_REARR_COMM_FC_2D_DISABLE
      209 };
      210 
      211 /* Constant to indicate unlimited requests. */
      212 #define PIO_REARR_COMM_UNLIMITED_PEND_REQ -1
      213 
      217 typedef struct rearr_comm_fc_opt
      218 {
      220     bool hs;
      221 
      223     bool isend;
      224 
      231     int max_pend_req;
      232 } rearr_comm_fc_opt_t;
      233 
      237 typedef struct rearr_opt
      238 {
      240     int comm_type;
      241 
      243     int fcd;
      244 
      246     rearr_comm_fc_opt_t comp2io;
      247 
      249     rearr_comm_fc_opt_t io2comp;
      250 } rearr_opt_t;
      251 
      258 typedef struct io_desc_t
      259 {
      261     int ioid;
      262 
      264     int maplen;
      265 
      268     PIO_Offset *map;
      269 
      274     int *remap;
      275 
      278     int nrecvs;
      279 
      281     int ndof;
      282 
      285     int ndims;
      286 
      288     int *dimlen;
      289 
      291     int num_aiotasks;
      292 
      294     int rearranger;
      295 
      297     int maxregions;
      298 
      301     bool needsfill;
      302 
      304     bool needssort;
      305 
      307     int maxbytes;
      308 
      310     int piotype;
      311 
      313     int piotype_size;
      314 
      316     MPI_Datatype mpitype;
      317 
      319     int mpitype_size;
      320 
      326     PIO_Offset llen;
      327 
      329     int maxiobuflen;
      330 
      332     int *rfrom;
      333 
      336     int *rcount;
      337 
      340     int *scount;
      341 
      344     PIO_Offset *sindex;
      345 
      347     PIO_Offset *rindex;
      348 
      350     MPI_Datatype *rtype;
      351 
      353     MPI_Datatype *stype;
      354 
      356     int num_stypes;
      357 
      359     int holegridsize;
      360 
      362     int maxholegridsize;
      363 
      365     int maxfillregions;
      366 
      368     io_region *firstregion;
      369 
      371     io_region *fillregion;
      372 
      376     rearr_opt_t rearr_opts;
      377 
      381     MPI_Comm subset_comm;
      382 
      384     struct io_desc_t *next;
      385 } io_desc_t;
      386 
      393 typedef struct iosystem_desc_t
      394 {
      397     int iosysid;
      398 
      401     MPI_Comm union_comm;
      402 
      405     MPI_Comm io_comm;
      406 
      409     MPI_Comm comp_comm;
      410 
      413     MPI_Comm intercomm;
      414 
      417     MPI_Comm my_comm;
      418 
      420     int num_iotasks;
      421 
      423     int num_comptasks;
      424 
      428     int num_uniontasks;
      429 
      431     int union_rank;
      432 
      435     int comp_rank;
      436 
      439     int io_rank;
      440 
      443     int iomaster;
      444 
      447     int compmaster;
      448 
      451     int ioroot;
      452 
      456     int comproot;
      457 
      460     int *ioranks;
      461 
      464     int *compranks;
      465 
      467     int error_handler;
      468 
      471     int default_rearranger;
      472 
      474     bool async;
      475 
      477     bool ioproc;
      478 
      481     bool compproc;
      482 
      484     MPI_Info info;
      485 
      487     int comp_idx;
      488 
      490     rearr_opt_t rearr_opts;
      491 
      493     struct iosystem_desc_t *next;
      494 } iosystem_desc_t;
      495 
      500 typedef struct wmulti_buffer
      501 {
      504     int ioid;
      505 
      507     int recordvar;
      508 
      512     int num_arrays;
      513 
      516     int arraylen;
      517 
      519     int *vid;
      520 
      523     int *frame;
      524 
      526     void *fillvalue;
      527 
      529     void *data;
      530 
      532     struct wmulti_buffer *next;
      533 } wmulti_buffer;
      534 
      540 typedef struct file_desc_t
      541 {
      543     iosystem_desc_t *iosystem;
      544 
      547     int fh;
      548 
      550     int pio_ncid;
      551 
      553     int iotype;
      554 
      556     struct var_desc_t *varlist;
      557 
      559     int nvars;
      560 
      562     int writable;
      563 
      566     struct wmulti_buffer buffer;
      567 
      569     void *iobuf;
      570 
      572     int pio_type;
      573 
      575     struct file_desc_t *next;
      576 
      579     int do_io;
      580 } file_desc_t;
      581 
      586 enum PIO_IOTYPE
      587 {
      589     PIO_IOTYPE_PNETCDF = 1,
      590 
      592     PIO_IOTYPE_NETCDF = 2,
      593 
      595     PIO_IOTYPE_NETCDF4C = 3,
      596 
      598     PIO_IOTYPE_NETCDF4P = 4
      599 };
      600 
      604 enum PIO_REARRANGERS
      605 {
      607     PIO_REARR_BOX = 1,
      608 
      610     PIO_REARR_SUBSET = 2
      611 };
      612 
      616 enum PIO_ERROR_HANDLERS
      617 {
      619     PIO_INTERNAL_ERROR = (-51),
      620 
      622     PIO_BCAST_ERROR = (-52),
      623 
      625     PIO_RETURN_ERROR = (-53)
      626 };
      627 
      628 #if defined( _PNETCDF) || defined(_NETCDF)
      629 
      630 #define PIO_GLOBAL NC_GLOBAL
      631 #define PIO_UNLIMITED NC_UNLIMITED
      632 
      633 /* NetCDF types. */
      634 #define PIO_BYTE   NC_BYTE
      635 #define PIO_CHAR   NC_CHAR
      636 #define PIO_SHORT  NC_SHORT
      637 #define PIO_INT    NC_INT
      638 #define PIO_FLOAT  NC_FLOAT
      639 #define PIO_REAL   NC_FLOAT
      640 #define PIO_DOUBLE NC_DOUBLE
      641 #define PIO_UBYTE  NC_UBYTE
      642 #define PIO_USHORT NC_USHORT
      643 #define PIO_UINT   NC_UINT
      644 #define PIO_INT64  NC_INT64
      645 #define PIO_UINT64 NC_UINT64
      646 #define PIO_STRING NC_STRING
      647 
      648 /* NetCDF flags. */
      649 #define PIO_WRITE  NC_WRITE
      650 #define PIO_NOWRITE  NC_NOWRITE
      651 #define PIO_CLOBBER NC_CLOBBER
      652 #define PIO_NOCLOBBER NC_NOCLOBBER
      653 #define PIO_FILL NC_FILL
      654 #define PIO_NOFILL NC_NOFILL
      655 #define PIO_MAX_NAME NC_MAX_NAME
      656 #define PIO_MAX_VAR_DIMS NC_MAX_VAR_DIMS
      657 #define PIO_64BIT_OFFSET NC_64BIT_OFFSET
      658 
      661 #define PIO_64BIT_DATA 0x0010
      662 
      664 #define PIO_NOERR  NC_NOERR
      665 #define PIO_EBADID NC_EBADID
      666 #define PIO_ENFILE NC_ENFILE
      667 #define PIO_EEXIST NC_EEXIST
      668 #define PIO_EINVAL NC_EINVAL
      669 #define PIO_EPERM NC_EPERM
      670 #define PIO_ENOTINDEFINE NC_ENOTINDEFINE
      671 #define PIO_EINDEFINE NC_EINDEFINE
      672 #define PIO_EINVALCOORDS NC_EINVALCOORDS
      673 #define PIO_EMAXDIMS NC_EMAXDIMS
      674 #define PIO_ENAMEINUSE NC_ENAMEINUSE
      675 #define PIO_ENOTATT NC_ENOTATT
      676 #define PIO_EMAXATTS NC_EMAXATTS
      677 #define PIO_EBADTYPE NC_EBADTYPE
      678 #define PIO_EBADDIM NC_EBADDIM
      679 #define PIO_EUNLIMPOS NC_EUNLIMPOS
      680 #define PIO_EMAXVARS NC_EMAXVARS
      681 #define PIO_ENOTVAR NC_ENOTVAR
      682 #define PIO_EGLOBAL NC_EGLOBAL
      683 #define PIO_ENOTNC NC_ENOTNC
      684 #define PIO_ESTS NC_ESTS
      685 #define PIO_EMAXNAME NC_EMAXNAME
      686 #define PIO_EUNLIMIT NC_EUNLIMIT
      687 #define PIO_ENORECVARS NC_ENORECVARS
      688 #define PIO_ECHAR NC_ECHAR
      689 #define PIO_EEDGE NC_EEDGE
      690 #define PIO_ESTRIDE NC_ESTRIDE
      691 #define PIO_EBADNAME NC_EBADNAME
      692 #define PIO_ERANGE NC_ERANGE
      693 #define PIO_ENOMEM NC_ENOMEM
      694 #define PIO_EVARSIZE NC_EVARSIZE
      695 #define PIO_EDIMSIZE NC_EDIMSIZE
      696 #define PIO_ETRUNC NC_ETRUNC
      697 #define PIO_EAXISTYPE NC_EAXISTYPE
      698 #define PIO_EDAP NC_EDAP
      699 #define PIO_ECURL NC_ECURL
      700 #define PIO_EIO NC_EIO
      701 #define PIO_ENODATA NC_ENODATA
      702 #define PIO_EDAPSVC NC_EDAPSVC
      703 #define PIO_EDAS NC_EDAS
      704 #define PIO_EDDS NC_EDDS
      705 #define PIO_EDATADDS NC_EDATADDS
      706 #define PIO_EDAPURL NC_EDAPURL
      707 #define PIO_EDAPCONSTRAINT NC_EDAPCONSTRAINT
      708 #define PIO_ETRANSLATION NC_ETRANSLATION
      709 #define PIO_EHDFERR NC_EHDFERR
      710 #define PIO_ECANTREAD NC_ECANTREAD
      711 #define PIO_ECANTWRITE NC_ECANTWRITE
      712 #define PIO_ECANTCREATE NC_ECANTCREATE
      713 #define PIO_EFILEMETA NC_EFILEMETA
      714 #define PIO_EDIMMETA NC_EDIMMETA
      715 #define PIO_EATTMETA NC_EATTMETA
      716 #define PIO_EVARMETA NC_EVARMETA
      717 #define PIO_ENOCOMPOUND NC_ENOCOMPOUND
      718 #define PIO_EATTEXISTS NC_EATTEXISTS
      719 #define PIO_ENOTNC4 NC_ENOTNC4
      720 #define PIO_ESTRICTNC3 NC_ESTRICTNC3
      721 #define PIO_ENOTNC3 NC_ENOTNC3
      722 #define PIO_ENOPAR NC_ENOPAR
      723 #define PIO_EPARINIT NC_EPARINIT
      724 #define PIO_EBADGRPID NC_EBADGRPID
      725 #define PIO_EBADTYPID NC_EBADTYPID
      726 #define PIO_ETYPDEFINED NC_ETYPDEFINED
      727 #define PIO_EBADFIELD NC_EBADFIELD
      728 #define PIO_EBADCLASS NC_EBADCLASS
      729 #define PIO_EMAPTYPE NC_EMAPTYPE
      730 #define PIO_ELATEFILL NC_ELATEFILL
      731 #define PIO_ELATEDEF NC_ELATEDEF
      732 #define PIO_EDIMSCALE NC_EDIMSCALE
      733 #define PIO_ENOGRP NC_ENOGRP
      734 #define PIO_ESTORAGE NC_ESTORAGE
      735 #define PIO_EBADCHUNK NC_EBADCHUNK
      736 #define PIO_ENOTBUILT NC_ENOTBUILT
      737 #define PIO_EDISKLESS NC_EDISKLESS
      738 
      739 /* These are the netCDF default fill values. */
      740 #define PIO_FILL_BYTE NC_FILL_BYTE
      741 #define PIO_FILL_CHAR NC_FILL_CHAR
      742 #define PIO_FILL_SHORT NC_FILL_SHORT
      743 #define PIO_FILL_INT NC_FILL_INT
      744 #define PIO_FILL_FLOAT NC_FILL_FLOAT
      745 #define PIO_FILL_DOUBLE NC_FILL_DOUBLE
      746 #define PIO_FILL_UBYTE NC_FILL_UBYTE
      747 #define PIO_FILL_USHORT NC_FILL_USHORT
      748 #define PIO_FILL_UINT NC_FILL_UINT
      749 #define PIO_FILL_INT64 NC_FILL_INT64
      750 #define PIO_FILL_UINT64 NC_FILL_UINT64
      751 #endif /*  defined( _PNETCDF) || defined(_NETCDF) */
      752 
      754 #ifdef _PNETCDF
      755 #define PIO_EINDEP  NC_EINDEP
      756 #else  /* _PNETCDF */
      757 #define PIO_EINDEP  (-203)
      758 #endif /* _PNETCDF */
      759 
      761 #define PIO_FIRST_ERROR_CODE (-500)
      762 #define PIO_EBADIOTYPE  (-500)
      763 
      765 #define PIO_REQ_NULL (NC_REQ_NULL-1)
      766 
      767 #if defined(__cplusplus)
      768 extern "C" {
      769 #endif
      770     /* Error handling. */
      771     int PIOc_strerror(int pioerr, char *errstr);
      772     int PIOc_set_log_level(int level);
      773 
      774     /* Decomposition. */
      775 
      776     /* Init decomposition with 1-based compmap array. */
      777     int PIOc_InitDecomp(int iosysid, int pio_type, int ndims, const int *gdimlen, int maplen,
      778                         const PIO_Offset *compmap, int *ioidp, const int *rearr,
      779                         const PIO_Offset *iostart, const PIO_Offset *iocount);
      780     int PIOc_InitDecomp_bc(int iosysid, int basetype, int ndims, const int *gdimlen,
      781                            const long int *start, const long int *count, int *ioidp);
      782 
      783     /* Init decomposition with 0-based compmap array. */
      784     int PIOc_init_decomp(int iosysid, int pio_type, int ndims, const int *gdimlen, int maplen,
      785                          const PIO_Offset *compmap, int *ioidp, int rearranger,
      786                          const PIO_Offset *iostart, const PIO_Offset *iocount);
      787 
      788     /* Free resources associated with a decomposition. */
      789     int PIOc_freedecomp(int iosysid, int ioid);
      790 
      791     int PIOc_readmap(const char *file, int *ndims, int **gdims, PIO_Offset *fmaplen,
      792                      PIO_Offset **map, MPI_Comm comm);
      793     int PIOc_readmap_from_f90(const char *file,int *ndims, int **gdims, PIO_Offset *maplen,
      794                               PIO_Offset **map, int f90_comm);
      795     int PIOc_writemap(const char *file, int ndims, const int *gdims, PIO_Offset maplen,
      796                       PIO_Offset *map, MPI_Comm comm);
      797     int PIOc_writemap_from_f90(const char *file, int ndims, const int *gdims,
      798                                PIO_Offset maplen, const PIO_Offset *map, int f90_comm);
      799 
      800     /* Write a decomposition file. */
      801     int PIOc_write_decomp(const char *file, int iosysid, int ioid, MPI_Comm comm);
      802 
      803     /* Write a decomposition file using netCDF. */
      804     int PIOc_write_nc_decomp(int iosysid, const char *filename, int cmode, int ioid,
      805                              char *title, char *history, int fortran_order);
      806 
      807     /* Read a netCDF decomposition file. */
      808     int PIOc_read_nc_decomp(int iosysid, const char *filename, int *ioid, MPI_Comm comm,
      809                             int pio_type, char *title, char *history, int *fortran_order);
      810 
      811     /* Initializing IO system for async. */
      812     int PIOc_init_async(MPI_Comm world, int num_io_procs, int *io_proc_list, int component_count,
      813                         int *num_procs_per_comp, int **proc_list, MPI_Comm *io_comm, MPI_Comm *comp_comm,
      814                         int rearranger, int *iosysidp);
      815 
      816     int PIOc_Init_Intercomm(int component_count, MPI_Comm peer_comm, MPI_Comm *comp_comms,
      817                             MPI_Comm io_comm, int *iosysidp);
      818     int PIOc_get_numiotasks(int iosysid, int *numiotasks);
      819     int PIOc_Init_Intracomm(MPI_Comm comp_comm, int num_iotasks, int stride, int base, int rearr,
      820                             int *iosysidp);
      821     int PIOc_finalize(int iosysid);
      822 
      823     /* Set error handling for entire io system. */
      824     int PIOc_Set_IOSystem_Error_Handling(int iosysid, int method);
      825 
      826     /* Set error handling for entire io system. */
      827     int PIOc_set_iosystem_error_handling(int iosysid, int method, int *old_method);
      828 
      829     int PIOc_iam_iotask(int iosysid, bool *ioproc);
      830     int PIOc_iotask_rank(int iosysid, int *iorank);
      831     int PIOc_iosystem_is_active(int iosysid, bool *active);
      832     int PIOc_iotype_available(int iotype);
      833     int PIOc_set_rearr_opts(int iosysid, int comm_type, int fcd,
      834                             bool enable_hs_c2i, bool enable_isend_c2i,
      835                             int max_pend_req_c2i,
      836                             bool enable_hs_i2c, bool enable_isend_i2c,
      837                             int max_pend_req_i2c);
      838     /* Distributed data. */
      839     int PIOc_advanceframe(int ncid, int varid);
      840     int PIOc_setframe(int ncid, int varid, int frame);
      841     int PIOc_write_darray(int ncid, int varid, int ioid, PIO_Offset arraylen, void *array,
      842                           void *fillvalue);
      843     int PIOc_write_darray_multi(int ncid, const int *varids, int ioid, int nvars, PIO_Offset arraylen,
      844                                 void *array, const int *frame, void **fillvalue, bool flushtodisk);
      845     int PIOc_read_darray(int ncid, int varid, int ioid, PIO_Offset arraylen, void *array);
      846     int PIOc_get_local_array_size(int ioid);
      847 
      848     /* Handling files. */
      849     int PIOc_redef(int ncid);
      850     int PIOc_enddef(int ncid);
      851     int PIOc_sync(int ncid);
      852     int PIOc_deletefile(int iosysid, const char *filename);
      853     int PIOc_createfile(int iosysid, int *ncidp,  int *iotype, const char *fname, int mode);
      854     int PIOc_create(int iosysid, const char *path, int cmode, int *ncidp);
      855     int PIOc_openfile(int iosysid, int *ncidp, int *iotype, const char *fname, int mode);
      856     int PIOc_openfile2(int iosysid, int *ncidp, int *iotype, const char *fname, int mode);
      857     int PIOc_open(int iosysid, const char *path, int mode, int *ncidp);
      858     int PIOc_closefile(int ncid);
      859     int PIOc_inq_format(int ncid, int *formatp);
      860     int PIOc_inq(int ncid, int *ndimsp, int *nvarsp, int *ngattsp, int *unlimdimidp);
      861     int PIOc_inq_ndims(int ncid, int *ndimsp);
      862     int PIOc_inq_nvars(int ncid, int *nvarsp);
      863     int PIOc_inq_natts(int ncid, int *ngattsp);
      864     int PIOc_inq_unlimdim(int ncid, int *unlimdimidp);
      865     int PIOc_inq_unlimdims(int ncid, int *nunlimdimsp, int *unlimdimidsp);
      866     int PIOc_inq_type(int ncid, nc_type xtype, char *name, PIO_Offset *sizep);
      867     int PIOc_set_blocksize(int newblocksize);
      868     int PIOc_File_is_Open(int ncid);
      869 
      870     /* Set the IO node data buffer size limit. */
      871     PIO_Offset PIOc_set_buffer_size_limit(PIO_Offset limit);
      872 
      873     /* Set the error hanlding for a file. */
      874     int PIOc_Set_File_Error_Handling(int ncid, int method);
      875 
      876     int PIOc_set_hint(int iosysid, const char *hint, const char *hintval);
      877     int PIOc_set_chunk_cache(int iosysid, int iotype, PIO_Offset size, PIO_Offset nelems,
      878                              float preemption);
      879     int PIOc_get_chunk_cache(int iosysid, int iotype, PIO_Offset *sizep, PIO_Offset *nelemsp,
      880                              float *preemptionp);
      881 
      882     /* Dimensions. */
      883     int PIOc_inq_dim(int ncid, int dimid, char *name, PIO_Offset *lenp);
      884     int PIOc_inq_dimid(int ncid, const char *name, int *idp);
      885     int PIOc_inq_dimname(int ncid, int dimid, char *name);
      886     int PIOc_inq_dimlen(int ncid, int dimid, PIO_Offset *lenp);
      887     int PIOc_rename_dim(int ncid, int dimid, const char *name);
      888     int PIOc_def_dim(int ncid, const char *name, PIO_Offset len, int *idp);
      889 
      890     /* Variables. */
      891     int PIOc_inq_varid(int ncid, const char *name, int *varidp);
      892     int PIOc_inq_var(int ncid, int varid, char *name, nc_type *xtypep, int *ndimsp, int *dimidsp,
      893                      int *nattsp);
      894     int PIOc_inq_varname(int ncid, int varid, char *name);
      895     int PIOc_inq_vartype(int ncid, int varid, nc_type *xtypep);
      896     int PIOc_inq_varndims(int ncid, int varid, int *ndimsp);
      897     int PIOc_inq_vardimid(int ncid, int varid, int *dimidsp);
      898     int PIOc_inq_varnatts(int ncid, int varid, int *nattsp);
      899     int PIOc_def_var(int ncid, const char *name, nc_type xtype,  int ndims,
      900                      const int *dimidsp, int *varidp);
      901     int PIOc_set_fill(int ncid, int fillmode, int *old_modep);
      902     int PIOc_def_var_fill(int ncid, int varid, int no_fill, const void *fill_value);
      903     int PIOc_inq_var_fill(int ncid, int varid, int *no_fill, void *fill_valuep);
      904     int PIOc_rename_var(int ncid, int varid, const char *name);
      905 
      906     /* These variable settings only apply to netCDF-4 files. */
      907     int PIOc_def_var_deflate(int ncid, int varid, int shuffle, int deflate,
      908                              int deflate_level);
      909     int PIOc_inq_var_deflate(int ncid, int varid, int *shufflep, int *deflatep,
      910                              int *deflate_levelp);
      911     int PIOc_inq_var_szip(int ncid, int varid, int *options_maskp, int *pixels_per_blockp);
      912     int PIOc_def_var_chunking(int ncid, int varid, int storage, const PIO_Offset *chunksizesp);
      913     int PIOc_inq_var_chunking(int ncid, int varid, int *storagep, PIO_Offset *chunksizesp);
      914     int PIOc_def_var_endian(int ncid, int varid, int endian);
      915     int PIOc_inq_var_endian(int ncid, int varid, int *endianp);
      916     int PIOc_set_var_chunk_cache(int ncid, int varid, PIO_Offset size, PIO_Offset nelems,
      917                                  float preemption);
      918     int PIOc_get_var_chunk_cache(int ncid, int varid, PIO_Offset *sizep, PIO_Offset *nelemsp,
      919                                  float *preemptionp);
      920 
      921     /* Attributes - misc. */
      922     int PIOc_rename_att(int ncid, int varid, const char *name, const char *newname);
      923     int PIOc_del_att(int ncid, int varid, const char *name);
      924 
      925     /* Attributes - inquiry functions. */
      926     int PIOc_inq_att(int ncid, int varid, const char *name, nc_type *xtypep,
      927                      PIO_Offset *lenp);
      928     int PIOc_inq_attid(int ncid, int varid, const char *name, int *idp);
      929     int PIOc_inq_attlen(int ncid, int varid, const char *name, PIO_Offset *lenp);
      930     int PIOc_inq_atttype(int ncid, int varid, const char *name, nc_type *xtypep);
      931     int PIOc_inq_attname(int ncid, int varid, int attnum, char *name);
      932 
      933     /* Attributes - writing. */
      934     int PIOc_put_att(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const void *op);
      935     int PIOc_put_att_text(int ncid, int varid, const char *name, PIO_Offset len, const char *op);
      936     int PIOc_put_att_schar(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len,
      937                            const signed char *op);
      938     int PIOc_put_att_short(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len,
      939                            const short *op);
      940     int PIOc_put_att_int(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len,
      941                          const int *op);
      942     int PIOc_put_att_long(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len,
      943                           const long *op);
      944     int PIOc_put_att_float(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len,
      945                            const float *op);
      946     int PIOc_put_att_double(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len,
      947                             const double *op);
      948     int PIOc_put_att_uchar(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len,
      949                            const unsigned char *op);
      950     int PIOc_put_att_ushort(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len,
      951                             const unsigned short *op);
      952     int PIOc_put_att_uint(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len,
      953                           const unsigned int *op);
      954     int PIOc_put_att_longlong(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len,
      955                               const long long *op);
      956     int PIOc_put_att_ulonglong(int ncid, int varid, const char *name, nc_type xtype,
      957                                PIO_Offset len, const unsigned long long *op);
      958 
      959     /* Attributes - reading. */
      960     int PIOc_get_att(int ncid, int varid, const char *name, void *ip);
      961     int PIOc_get_att_text(int ncid, int varid, const char *name, char *ip);
      962     int PIOc_get_att_schar(int ncid, int varid, const char *name, signed char *ip);
      963     int PIOc_get_att_short(int ncid, int varid, const char *name, short *ip);
      964     int PIOc_get_att_int(int ncid, int varid, const char *name, int *ip);
      965     int PIOc_get_att_long(int ncid, int varid, const char *name, long *ip);
      966     int PIOc_get_att_float(int ncid, int varid, const char *name, float *ip);
      967     int PIOc_get_att_double(int ncid, int varid, const char *name, double *ip);
      968     int PIOc_get_att_uchar(int ncid, int varid, const char *name, unsigned char *ip);
      969     int PIOc_get_att_ushort(int ncid, int varid, const char *name, unsigned short *ip);
      970     int PIOc_get_att_uint(int ncid, int varid, const char *name, unsigned int *ip);
      971     int PIOc_get_att_longlong(int ncid, int varid, const char *name, long long *ip);
      972     int PIOc_get_att_ulonglong(int ncid, int varid, const char *name, unsigned long long *ip);
      973 
      974     /* Data reads - var. */
      975     int PIOc_get_var(int ncid, int varid, void *buf);
      976     int PIOc_get_var_text(int ncid, int varid, char *buf);
      977     int PIOc_get_var_schar(int ncid, int varid, signed char *buf);
      978     int PIOc_get_var_short(int ncid, int varid, short *buf);
      979     int PIOc_get_var_int(int ncid, int varid, int *buf);
      980     int PIOc_get_var_long(int ncid, int varid, long *buf);
      981     int PIOc_get_var_float(int ncid, int varid, float *buf);
      982     int PIOc_get_var_double(int ncid, int varid, double *buf);
      983     int PIOc_get_var_uchar(int ncid, int varid, unsigned char *buf);
      984     int PIOc_get_var_ushort(int ncid, int varid, unsigned short *buf);
      985     int PIOc_get_var_uint(int ncid, int varid, unsigned int *buf);
      986     int PIOc_get_var_longlong(int ncid, int varid, long long *buf);
      987     int PIOc_get_var_ulonglong(int ncid, int varid, unsigned long long *buf);
      988 
      989     /* Data writes - var. */
      990     int PIOc_put_var(int ncid, int varid, const void *buf);
      991     int PIOc_put_var_text(int ncid, int varid, const char *op);
      992     int PIOc_put_var_schar(int ncid, int varid, const signed char *op);
      993     int PIOc_put_var_short(int ncid, int varid, const short *op);
      994     int PIOc_put_var_int(int ncid, int varid, const int *op);
      995     int PIOc_put_var_long(int ncid, int varid, const long *op);
      996     int PIOc_put_var_float(int ncid, int varid, const float *op);
      997     int PIOc_put_var_double(int ncid, int varid, const double *op);
      998     int PIOc_put_var_uchar(int ncid, int varid, const unsigned char *op);
      999     int PIOc_put_var_ushort(int ncid, int varid, const unsigned short *op);
     1000     int PIOc_put_var_uint(int ncid, int varid, const unsigned int *op);
     1001     int PIOc_put_var_longlong(int ncid, int varid, const long long *op);
     1002     int PIOc_put_var_ulonglong(int ncid, int varid, const unsigned long long *op);
     1003 
     1004     /* Data reads - var1. */
     1005     int PIOc_get_var1(int ncid, int varid, const PIO_Offset *index, void *buf);
     1006     int PIOc_get_var1_text(int ncid, int varid, const PIO_Offset *index, char *buf);
     1007     int PIOc_get_var1_schar(int ncid, int varid, const PIO_Offset *index, signed char *buf);
     1008     int PIOc_get_var1_short(int ncid, int varid, const PIO_Offset *index, short *buf);
     1009     int PIOc_get_var1_int(int ncid, int varid, const PIO_Offset *index, int *buf);
     1010     int PIOc_get_var1_long(int ncid, int varid, const PIO_Offset *index, long *buf);
     1011     int PIOc_get_var1_float(int ncid, int varid, const PIO_Offset *index, float *buf);
     1012     int PIOc_get_var1_double(int ncid, int varid, const PIO_Offset *index, double *buf);
     1013     int PIOc_get_var1_uchar(int ncid, int varid, const PIO_Offset *index, unsigned char *buf);
     1014     int PIOc_get_var1_ushort(int ncid, int varid, const PIO_Offset *index, unsigned short *buf);
     1015     int PIOc_get_var1_uint(int ncid, int varid, const PIO_Offset *index, unsigned int *buf);
     1016     int PIOc_get_var1_longlong(int ncid, int varid, const PIO_Offset *index, long long *buf);
     1017     int PIOc_get_var1_ulonglong(int ncid, int varid, const PIO_Offset *index, unsigned long long *buf);
     1018 
     1019     /* Data writes - var1. */
     1020     int PIOc_put_var1(int ncid, int varid, const PIO_Offset *index, const void *buf);
     1021     int PIOc_put_var1_text(int ncid, int varid, const PIO_Offset *index, const char *op);
     1022     int PIOc_put_var1_schar(int ncid, int varid, const PIO_Offset *index, const signed char *op);
     1023     int PIOc_put_var1_short(int ncid, int varid, const PIO_Offset *index, const short *op);
     1024     int PIOc_put_var1_int(int ncid, int varid, const PIO_Offset *index, const int *op);
     1025     int PIOc_put_var1_long(int ncid, int varid, const PIO_Offset *index, const long *ip);
     1026     int PIOc_put_var1_float(int ncid, int varid, const PIO_Offset *index, const float *op);
     1027     int PIOc_put_var1_double(int ncid, int varid, const PIO_Offset *index, const double *op);
     1028     int PIOc_put_var1_uchar(int ncid, int varid, const PIO_Offset *index,
     1029                             const unsigned char *op);
     1030     int PIOc_put_var1_ushort(int ncid, int varid, const PIO_Offset *index,
     1031                              const unsigned short *op);
     1032     int PIOc_put_var1_uint(int ncid, int varid, const PIO_Offset *index,
     1033                            const unsigned int *op);
     1034     int PIOc_put_var1_longlong(int ncid, int varid, const PIO_Offset *index, const long long *op);
     1035     int PIOc_put_var1_ulonglong(int ncid, int varid, const PIO_Offset *index,
     1036                                 const unsigned long long *op);
     1037 
     1038     /* Data reads - vara. */
     1039     int PIOc_get_vara(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, void *buf);
     1040     int PIOc_get_vara_text(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1041                            char *buf);
     1042     int PIOc_get_vara_schar(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1043                             signed char *buf);
     1044     int PIOc_get_vara_short(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1045                             short *buf);
     1046     int PIOc_get_vara_int(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1047                           int *buf);
     1048     int PIOc_get_vara_float(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1049                             float *buf);
     1050     int PIOc_get_vara_long(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1051                            long *buf);
     1052     int PIOc_get_vara_double(int ncid, int varid, const PIO_Offset *start,
     1053                              const PIO_Offset *count, double *buf);
     1054     int PIOc_get_vara_uchar(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1055                             unsigned char *buf);
     1056     int PIOc_get_vara_ushort(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1057                              unsigned short *buf);
     1058     int PIOc_get_vara_uint(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1059                            unsigned int *buf);
     1060     int PIOc_get_vara_longlong(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1061                                long long *buf);
     1062     int PIOc_get_vara_ulonglong(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1063                                 unsigned long long *buf);
     1064 
     1065     /* Data writes - vara. */
     1066     int PIOc_put_vara(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1067                       const void *buf);
     1068     int PIOc_put_vara_text(int ncid, int varid, const PIO_Offset *start,
     1069                            const PIO_Offset *count, const char *op);
     1070     int PIOc_put_vara_schar(int ncid, int varid, const PIO_Offset *start,
     1071                             const PIO_Offset *count, const signed char *op);
     1072     int PIOc_put_vara_short(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1073                             const short *op);
     1074     int PIOc_put_vara_int(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1075                           const int *op);
     1076     int PIOc_put_vara_long(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1077                            const long *op);
     1078     int PIOc_put_vara_float(int ncid, int varid, const PIO_Offset *start,
     1079                             const PIO_Offset *count, const float *op);
     1080     int PIOc_put_vara_double(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1081                              const double *op);
     1082     int PIOc_put_vara_uchar(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1083                             const unsigned char *op);
     1084     int PIOc_put_vara_ushort(int ncid, int varid, const PIO_Offset *start,
     1085                              const PIO_Offset *count, const unsigned short *op);
     1086     int PIOc_put_vara_uint(int ncid, int varid, const PIO_Offset *start,
     1087                            const PIO_Offset *count, const unsigned int *op);
     1088     int PIOc_put_vara_longlong(int ncid, int varid, const PIO_Offset *start,
     1089                                const PIO_Offset *count, const long long *op);
     1090     int PIOc_put_vara_ulonglong(int ncid, int varid, const PIO_Offset *start,
     1091                                 const PIO_Offset *count, const unsigned long long *op);
     1092 
     1093     /* Data reads - vars. */
     1094     int PIOc_get_vars(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1095                       const PIO_Offset *stride, void *buf);
     1096     int PIOc_get_vars_text(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1097                            const PIO_Offset *stride, char *buf);
     1098     int PIOc_get_vars_schar(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1099                             const PIO_Offset *stride, signed char *buf);
     1100     int PIOc_get_vars_short(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1101                             const PIO_Offset *stride, short *buf);
     1102     int PIOc_get_vars_int(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1103                           const PIO_Offset *stride, int *buf);
     1104     int PIOc_get_vars_long(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1105                            const PIO_Offset *stride, long *buf);
     1106     int PIOc_get_vars_float(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1107                             const PIO_Offset *stride, float *buf);
     1108     int PIOc_get_vars_double(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1109                              const PIO_Offset *stride, double *buf);
     1110     int PIOc_get_vars_uchar(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1111                             const PIO_Offset *stride, unsigned char *buf);
     1112     int PIOc_get_vars_ushort(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1113                              const PIO_Offset *stride, unsigned short *buf);
     1114     int PIOc_get_vars_uint(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1115                            const PIO_Offset *stride, unsigned int *buf);
     1116     int PIOc_get_vars_longlong(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1117                                const PIO_Offset *stride, long long *buf);
     1118     int PIOc_get_vars_ulonglong(int ncid, int varid, const PIO_Offset *start,
     1119                                 const PIO_Offset *count, const PIO_Offset *stride,
     1120                                 unsigned long long *buf);
     1121 
     1122     /* Data writes - vars. */
     1123     int PIOc_put_vars(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1124                       const PIO_Offset *stride, const void *buf);
     1125     int PIOc_put_vars_text(int ncid, int varid, const PIO_Offset *start,
     1126                            const PIO_Offset *count, const PIO_Offset *stride, const char *op);
     1127     int PIOc_put_vars_schar(int ncid, int varid, const PIO_Offset *start,
     1128                             const PIO_Offset *count, const PIO_Offset *stride,
     1129                             const signed char *op);
     1130     int PIOc_put_vars_short(int ncid, int varid, const PIO_Offset *start,
     1131                             const PIO_Offset *count, const PIO_Offset *stride, const short *op);
     1132     int PIOc_put_vars_int(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1133                           const PIO_Offset *stride, const int *op);
     1134     int PIOc_put_vars_float(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1135                             const PIO_Offset *stride, const float *op);
     1136     int PIOc_put_vars_double(int ncid, int varid, const PIO_Offset *start,
     1137                              const PIO_Offset *count, const PIO_Offset *stride, const double *op);
     1138     int PIOc_put_vars_long(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1139                            const PIO_Offset *stride, const long *op);
     1140     int PIOc_put_vars_uchar(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1141                             const PIO_Offset *stride, const unsigned char *op);
     1142     int PIOc_put_vars_ushort(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1143                              const PIO_Offset *stride, const unsigned short *op);
     1144     int PIOc_put_vars_uint(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1145                            const PIO_Offset *stride, const unsigned int *op);
     1146     int PIOc_put_vars_longlong(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count,
     1147                                const PIO_Offset *stride, const long long *op);
     1148     int PIOc_put_vars_ulonglong(int ncid, int varid, const PIO_Offset *start,
     1149                                 const PIO_Offset *count, const PIO_Offset *stride,
     1150                                 const unsigned long long *op);
     1151 
     1152 #if defined(__cplusplus)
     1153 }
     1154 #endif
     1155 
     1156 #endif  // _PIO_H_
    iosystem_desc_t
    IO system descriptor structure. 
    Definition: pio.h:393
    
+
    PIOc_inq_var_chunking
    int PIOc_inq_var_chunking(int ncid, int varid, int *storagep, PIO_Offset *chunksizesp)
    Inquire about chunksizes for a variable. 
    Definition: pio_nc4.c:356
    
+
    PIOc_put_att_double
    int PIOc_put_att_double(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const double *op)
    Write a netCDF attribute array of 64-bit floating points. 
    Definition: pio_nc.c:3084
    
+
    io_desc_t::maxfillregions
    int maxfillregions
    Used when writing fill data. 
    Definition: pio.h:365
    
+
    io_desc_t::needsfill
    bool needsfill
    Does this decomp leave holes in the field (true) or write everywhere (false) 
    Definition: pio.h:301
    
+
    PIOc_inq_dimname
    int PIOc_inq_dimname(int ncid, int dimid, char *name)
    Find the name of a dimension. 
    Definition: pio_nc.c:636
    
+
    PIOc_put_vara_ulonglong
    int PIOc_put_vara_ulonglong(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const unsigned long long *op)
    Put muti-dimensional subset of an unsigned 64-bit integer variable. 
    Definition: pio_put_nc.c:826
    
+
    PIOc_rename_dim
    int PIOc_rename_dim(int ncid, int dimid, const char *name)
    The PIO-C interface for the NetCDF function nc_rename_dim. 
    Definition: pio_nc.c:1440
    
+
    iosystem_desc_t::num_uniontasks
    int num_uniontasks
    The number of tasks in the union communicator (will be num_comptasks for non-async, num_comptasks + num_iotasks for async). 
    Definition: pio.h:428
    
+
    PIOc_inq_unlimdim
    int PIOc_inq_unlimdim(int ncid, int *unlimdimidp)
    Find out the dimension ids of the unlimited dimension. 
    Definition: pio_nc.c:209
    
+
    PIOc_get_vars_long
    int PIOc_get_vars_long(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, long *buf)
    Get strided, muti-dimensional subset of a 64-bit int variable. 
    Definition: pio_get_nc.c:226
    
+
    PIOc_put_var1_text
    int PIOc_put_var1_text(int ncid, int varid, const PIO_Offset *index, const char *op)
    Get one value from an text variable. 
    Definition: pio_put_nc.c:359
    
+
    PIOc_inq_vardimid
    int PIOc_inq_vardimid(int ncid, int varid, int *dimidsp)
    Find the dimension IDs associated with a variable. 
    Definition: pio_nc.c:970
    
+
    PIOc_inq_dim
    int PIOc_inq_dim(int ncid, int dimid, char *name, PIO_Offset *lenp)
    The PIO-C interface for the NetCDF function nc_inq_dim. 
    Definition: pio_nc.c:534
    
+
    io_desc_t::piotype
    int piotype
    The PIO type of the data. 
    Definition: pio.h:310
    
+
    PIOc_put_vara_uint
    int PIOc_put_vara_uint(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const unsigned int *op)
    Put muti-dimensional subset of an unsigned integer variable. 
    Definition: pio_put_nc.c:730
    
+
    PIOc_get_vars_schar
    int PIOc_get_vars_schar(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, signed char *buf)
    Get strided, muti-dimensional subset of a signed char variable. 
    Definition: pio_get_nc.c:90
    
+
    PIO_REARRANGERS
    PIO_REARRANGERS
    These are the supported output data rearrangement methods. 
    Definition: pio.h:604
    
+
    PIOc_put_vars_uchar
    int PIOc_put_vars_uchar(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const unsigned char *op)
    Get strided, muti-dimensional subset of an unsigned char variable. 
    Definition: pio_put_nc.c:62
    
+
    iosystem_desc_t::compranks
    int * compranks
    An array of the ranks of all computation tasks within the union communicator. 
    Definition: pio.h:464
    
+
    io_desc_t::maxiobuflen
    int maxiobuflen
    Maximum llen participating. 
    Definition: pio.h:329
    
+
    PIOc_get_var1_double
    int PIOc_get_var1_double(int ncid, int varid, const PIO_Offset *index, double *buf)
    Get one value of a 64-bit floating point variable. 
    Definition: pio_get_nc.c:1034
    
+
    PIO_REARR_COMM_FC_1D_IO2COMP
    IO procs to comp procs only. 
    Definition: pio.h:205
    
+
    file_desc_t
    struct file_desc_t file_desc_t
    File descriptor structure. 
    
+
    PIOc_iotask_rank
    int PIOc_iotask_rank(int iosysid, int *iorank)
    Return the rank of this task in the IO communicator or -1 if this task is not in the communicator...
    Definition: pioc.c:1201
    
+
    PIOc_def_var_deflate
    int PIOc_def_var_deflate(int ncid, int varid, int shuffle, int deflate, int deflate_level)
    Set deflate (zlib) settings for a variable. 
    Definition: pio_nc4.c:34
    
+
    file_desc_t::pio_type
    int pio_type
    PIO data type. 
    Definition: pio.h:572
    
+
    PIOc_enddef
    int PIOc_enddef(int ncid)
    The PIO-C interface for the NetCDF function nc_enddef. 
    Definition: pio_nc.c:1878
    
+
    io_desc_t::nrecvs
    int nrecvs
    Number of tasks involved in the communication between comp and io tasks. 
    Definition: pio.h:278
    
+
    var_desc_t::mpi_type
    MPI_Datatype mpi_type
    The MPI type of the data. 
    Definition: pio.h:142
    
+
    io_desc_t::needssort
    bool needssort
    If the map is not monotonically increasing we will need to sort it. 
    Definition: pio.h:304
    
+
    PIOc_get_var_schar
    int PIOc_get_var_schar(int ncid, int varid, signed char *buf)
    Get all data of a signed char variable. 
    Definition: pio_get_nc.c:679
    
+
    iosystem_desc_t::info
    MPI_Info info
    MPI Info object. 
    Definition: pio.h:484
    
+
    PIOc_get_att_uchar
    int PIOc_get_att_uchar(int ncid, int varid, const char *name, unsigned char *ip)
    Get the value of an 8-bit unsigned char array attribute. 
    Definition: pio_nc.c:2607
    
+
    PIOc_inq_var_endian
    int PIOc_inq_var_endian(int ncid, int varid, int *endianp)
    Inquire about chunksizes for a variable. 
    Definition: pio_nc4.c:564
    
+
    PIOc_put_var1_uchar
    int PIOc_put_var1_uchar(int ncid, int varid, const PIO_Offset *index, const unsigned char *op)
    Get one value from an text variable. 
    Definition: pio_put_nc.c:379
    
+
    PIOc_put_vara_text
    int PIOc_put_vara_text(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const char *op)
    Put muti-dimensional subset of a text variable. 
    Definition: pio_put_nc.c:610
    
+
    PIOc_put_var_long
    int PIOc_put_var_long(int ncid, int varid, const long *op)
    Put all data to an integer variable. 
    Definition: pio_put_nc.c:1059
    
+
    PIOc_get_vara_ulonglong
    int PIOc_get_vara_ulonglong(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, unsigned long long *buf)
    Get a muti-dimensional subset of an unsigned 64-bit integer variable. 
    Definition: pio_get_nc.c:603
    
+
    PIOc_put_vara_ushort
    int PIOc_put_vara_ushort(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const unsigned short *op)
    Put muti-dimensional subset of an unsigned 16-bit integer variable. 
    Definition: pio_put_nc.c:682
    
+
    iosystem_desc_t
    struct iosystem_desc_t iosystem_desc_t
    IO system descriptor structure. 
    
+
    io_desc_t::maxholegridsize
    int maxholegridsize
    max holegridsize across all io tasks, needed for netcdf and netcdf4c serial 
    Definition: pio.h:362
    
+
    PIOc_put_att_schar
    int PIOc_put_att_schar(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const signed char *op)
    Write a netCDF attribute array of 8-bit signed chars. 
    Definition: pio_nc.c:2831
    
+
    PIOc_get_vars_ushort
    int PIOc_get_vars_ushort(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, unsigned short *buf)
    Get strided, muti-dimensional subset of an unsigned 16-bit integer variable. 
    Definition: pio_get_nc.c:118
    
+
    PIO_IOTYPE_NETCDF4C
    NetCDF4 (HDF5) compressed format (serial) 
    Definition: pio.h:595
    
+
    PIOc_put_var1
    int PIOc_put_var1(int ncid, int varid, const PIO_Offset *index, const void *buf)
    Get one value from a variable of any type. 
    Definition: pio_put_nc.c:1188
    
+
    wmulti_buffer::fillvalue
    void * fillvalue
    Array of fill values used for each var. 
    Definition: pio.h:526
    
+
    PIOc_put_vars_ulonglong
    int PIOc_put_vars_ulonglong(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const unsigned long long *op)
    Get strided, muti-dimensional subset of an unsigned 64-bit integer variable. 
    Definition: pio_put_nc.c:338
    
+
    PIOc_inq_type
    int PIOc_inq_type(int ncid, nc_type xtype, char *name, PIO_Offset *sizep)
    Learn the name and size of a type. 
    Definition: pio_nc.c:364
    
+
    PIOc_get_att_text
    int PIOc_get_att_text(int ncid, int varid, const char *name, char *ip)
    Get the value of an text attribute. 
    Definition: pio_nc.c:2689
    
+
    PIOc_get_numiotasks
    int PIOc_get_numiotasks(int iosysid, int *numiotasks)
    Get the number of IO tasks set. 
    Definition: pioc.c:237
    
+
    PIOc_Set_File_Error_Handling
    int PIOc_Set_File_Error_Handling(int ncid, int method)
    Set the error handling method to be used for subsequent pio library calls, returns the previous metho...
    Definition: pioc.c:85
    
+
    PIOc_setframe
    int PIOc_setframe(int ncid, int varid, int frame)
    Set the unlimited dimension of the given variable. 
    Definition: pioc.c:176
    
+
    PIOc_put_var1_double
    int PIOc_put_var1_double(int ncid, int varid, const PIO_Offset *index, const double *op)
    Get one value from an 64-bit floating point variable. 
    Definition: pio_put_nc.c:544
    
+
    io_desc_t::piotype_size
    int piotype_size
    The size of one element of the piotype. 
    Definition: pio.h:313
    
+
    PIOc_create
    int PIOc_create(int iosysid, const char *path, int cmode, int *ncidp)
    Open a new file using pio. 
    Definition: pio_file.c:170
    
+
    PIOc_put_vars_float
    int PIOc_put_vars_float(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const float *op)
    Get strided, muti-dimensional subset of a floating point variable. 
    Definition: pio_put_nc.c:254
    
+
    PIOc_File_is_Open
    int PIOc_File_is_Open(int ncid)
    Check to see if PIO file is open. 
    Definition: pioc.c:58
    
+
    PIOc_get_var_long
    int PIOc_get_var_long(int ncid, int varid, long *buf)
    Get all data of a 64-bit integer variable. 
    Definition: pio_get_nc.c:764
    
+
    PIOc_set_hint
    int PIOc_set_hint(int iosysid, const char *hint, const char *hintval)
    Send a hint to the MPI-IO library. 
    Definition: pioc.c:1031
    
+
    PIOc_set_var_chunk_cache
    int PIOc_set_var_chunk_cache(int ncid, int varid, PIO_Offset size, PIO_Offset nelems, float preemption)
    Set chunksizes for a variable. 
    Definition: pio_nc4.c:875
    
+
    PIOc_init_decomp
    int PIOc_init_decomp(int iosysid, int pio_type, int ndims, const int *gdimlen, int maplen, const PIO_Offset *compmap, int *ioidp, int rearranger, const PIO_Offset *iostart, const PIO_Offset *iocount)
    Initialize the decomposition used with distributed arrays. 
    Definition: pioc.c:692
    
+
    PIOc_inq_ndims
    int PIOc_inq_ndims(int ncid, int *ndimsp)
    Find out how many dimensions are defined in the file. 
    Definition: pio_nc.c:165
    
+
    PIO_RETURN_ERROR
    Errors are returned to caller with no internal action. 
    Definition: pio.h:625
    
+
    io_desc_t::num_aiotasks
    int num_aiotasks
    The actual number of IO tasks participating. 
    Definition: pio.h:291
    
+
    rearr_opt::comm_type
    int comm_type
    Comm type - see PIO_REARR_COMM_TYPE. 
    Definition: pio.h:240
    
+
    io_desc_t::maxbytes
    int maxbytes
    The maximum number of bytes of this iodesc before flushing. 
    Definition: pio.h:307
    
+
    PIOc_sync
    int PIOc_sync(int ncid)
    PIO interface to nc_sync This routine is called collectively by all tasks in the communicator ios...
    Definition: pio_file.c:367
    
+
    PIOc_put_vars_uint
    int PIOc_put_vars_uint(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const unsigned int *op)
    Get strided, muti-dimensional subset of an unsigned integer variable. 
    Definition: pio_put_nc.c:173
    
+
    PIOc_set_chunk_cache
    int PIOc_set_chunk_cache(int iosysid, int iotype, PIO_Offset size, PIO_Offset nelems, float preemption)
    Set chunk cache netCDF files to be opened/created. 
    Definition: pio_nc4.c:656
    
+
    PIOc_get_vars_uint
    int PIOc_get_vars_uint(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, unsigned int *buf)
    Get strided, muti-dimensional subset of an unsigned integer variable. 
    Definition: pio_get_nc.c:172
    
+
    PIOc_get_vars
    int PIOc_get_vars(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, void *buf)
    Get strided, muti-dimensional subset of a variable of the same type as the variable in the file...
    Definition: pio_get_nc.c:1167
    
+
    PIOc_get_vars_longlong
    int PIOc_get_vars_longlong(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, long long *buf)
    Get strided, muti-dimensional subset of a 64-bit int variable. 
    Definition: pio_get_nc.c:337
    
+
    PIO_IOTYPE
    PIO_IOTYPE
    These are the supported methods of reading/writing netCDF files. 
    Definition: pio.h:586
    
+
    PIOc_put_vara_long
    int PIOc_put_vara_long(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const long *op)
    Put muti-dimensional subset of an integer variable. 
    Definition: pio_put_nc.c:778
    
+
    PIOc_put_vara_longlong
    int PIOc_put_vara_longlong(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const long long *op)
    Put muti-dimensional subset of a 64-bit integer variable. 
    Definition: pio_put_nc.c:850
    
+
    PIOc_put_var_int
    int PIOc_put_var_int(int ncid, int varid, const int *op)
    Put all data to an integer variable. 
    Definition: pio_put_nc.c:1036
    
+
    PIOc_deletefile
    int PIOc_deletefile(int iosysid, const char *filename)
    Delete a file. 
    Definition: pio_file.c:291
    
+
    PIOc_get_vars_double
    int PIOc_get_vars_double(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, double *buf)
    Get strided, muti-dimensional subset of a 64-bit floating point variable. 
    Definition: pio_get_nc.c:281
    
+
    PIOc_put_att_longlong
    int PIOc_put_att_longlong(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const long long *op)
    Write a netCDF attribute array of 64-bit signed integers. 
    Definition: pio_nc.c:2923
    
+
    iosystem_desc_t::next
    struct iosystem_desc_t * next
    Pointer to the next iosystem_desc_t in the list. 
    Definition: pio.h:493
    
+
    rearr_opt::io2comp
    rearr_comm_fc_opt_t io2comp
    flow control opts, io to comp procs 
    Definition: pio.h:249
    
+
    PIOc_put_att_long
    int PIOc_put_att_long(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const long *op)
    Write a netCDF attribute array of 32-bit signed integers. 
    Definition: pio_nc.c:2854
    
+
    rearr_comm_fc_opt::hs
    bool hs
    Enable handshake. 
    Definition: pio.h:220
    
+
    PIOc_get_vars_uchar
    int PIOc_get_vars_uchar(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, unsigned char *buf)
    Get strided, muti-dimensional subset of an unsigned char variable. 
    Definition: pio_get_nc.c:63
    
+
    PIO_IOTYPE_NETCDF
    Netcdf3 Classic format (serial) 
    Definition: pio.h:592
    
+
    iosystem_desc_t::ioproc
    bool ioproc
    True if this task is a member of the IO communicator. 
    Definition: pio.h:477
    
+
    PIOc_get_var_ushort
    int PIOc_get_var_ushort(int ncid, int varid, unsigned short *buf)
    Get all data of an unsigned 16-bit integer variable. 
    Definition: pio_get_nc.c:696
    
+
    PIOc_get_vara_int
    int PIOc_get_vara_int(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, int *buf)
    Get a muti-dimensional subset of an integer variable. 
    Definition: pio_get_nc.c:530
    
+
    rearr_opt
    Rearranger options. 
    Definition: pio.h:237
    
+
    io_desc_t::mpitype_size
    int mpitype_size
    The size in bytes of a datum of MPI type mpitype. 
    Definition: pio.h:319
    
+
    var_desc_t::mpi_type_size
    int mpi_type_size
    The size in bytes of a datum of MPI type mpitype. 
    Definition: pio.h:145
    
+
    PIOc_get_var_int
    int PIOc_get_var_int(int ncid, int varid, int *buf)
    Get all data of an integer variable. 
    Definition: pio_get_nc.c:747
    
+
    PIOc_openfile2
    int PIOc_openfile2(int iosysid, int *ncidp, int *iotype, const char *fname, int mode)
    Open an existing file using PIO library. 
    Definition: pio_file.c:60
    
+
    PIOc_get_vars_ulonglong
    int PIOc_get_vars_ulonglong(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, unsigned long long *buf)
    Get strided, muti-dimensional subset of an unsigned 64-bit int variable. 
    Definition: pio_get_nc.c:309
    
+
    var_desc_t::nreqs
    int nreqs
    Number of requests pending with pnetcdf. 
    Definition: pio.h:123
    
+
    PIOc_get_att_long
    int PIOc_get_att_long(int ncid, int varid, const char *name, long *ip)
    Get the value of an 32-bit ingeger array attribute. 
    Definition: pio_nc.c:2667
    
+
    PIOc_put_vars_ushort
    int PIOc_put_vars_ushort(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const unsigned short *op)
    Get strided, muti-dimensional subset of an unsigned 16-bit integer variable. 
    Definition: pio_put_nc.c:118
    
+
    io_desc_t::maxregions
    int maxregions
    Maximum number of regions in the decomposition. 
    Definition: pio.h:297
    
+
    io_desc_t::holegridsize
    int holegridsize
    Used when writing fill data. 
    Definition: pio.h:359
    
+
    io_desc_t::rcount
    int * rcount
    Array (length nrecvs) of counts of data to be received from each computation task by the IO tasks...
    Definition: pio.h:336
    
+
    wmulti_buffer::vid
    int * vid
    Array of varids. 
    Definition: pio.h:519
    
+
    PIOc_put_att_text
    int PIOc_put_att_text(int ncid, int varid, const char *name, PIO_Offset len, const char *op)
    Write a netCDF text attribute. 
    Definition: pio_nc.c:3038
    
+
    PIOc_get_att_uint
    int PIOc_get_att_uint(int ncid, int varid, const char *name, unsigned int *ip)
    Get the value of an 32-bit unsigned integer array attribute. 
    Definition: pio_nc.c:2647
    
+
    PIOc_get_vars_int
    int PIOc_get_vars_int(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, int *buf)
    Get strided, muti-dimensional subset of an integer variable. 
    Definition: pio_get_nc.c:199
    
+
    iosystem_desc_t::comp_idx
    int comp_idx
    Index of this component in the list of components. 
    Definition: pio.h:487
    
+
    PIOc_write_darray_multi
    int PIOc_write_darray_multi(int ncid, const int *varids, int ioid, int nvars, PIO_Offset arraylen, void *array, const int *frame, void **fillvalue, bool flushtodisk)
    Write one or more arrays with the same IO decomposition to the file. 
    Definition: pio_darray.c:104
    
+
    PIOc_put_vars
    int PIOc_put_vars(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const void *buf)
    Write strided, muti-dimensional subset of a variable of any type. 
    Definition: pio_put_nc.c:1238
    
+
    PIOc_put_vars_long
    int PIOc_put_vars_long(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const long *op)
    Get strided, muti-dimensional subset of a 64-bit integer variable. 
    Definition: pio_put_nc.c:227
    
+
    PIOc_rename_att
    int PIOc_rename_att(int ncid, int varid, const char *name, const char *newname)
    The PIO-C interface for the NetCDF function nc_rename_att. 
    Definition: pio_nc.c:1613
    
+
    PIOc_set_iosystem_error_handling
    int PIOc_set_iosystem_error_handling(int iosysid, int method, int *old_method)
    Set the error handling method used for subsequent calls for this IO system. 
    Definition: pioc.c:309
    
+
    PIOc_def_var_endian
    int PIOc_def_var_endian(int ncid, int varid, int endian)
    Set chunksizes for a variable. 
    Definition: pio_nc4.c:488
    
+
    var_desc_t::record
    int record
    The record number to be written. 
    Definition: pio.h:117
    
+
    PIOc_def_dim
    int PIOc_def_dim(int ncid, const char *name, PIO_Offset len, int *idp)
    The PIO-C interface for the NetCDF function nc_def_dim. 
    Definition: pio_nc.c:1917
    
+
    PIOc_del_att
    int PIOc_del_att(int ncid, int varid, const char *name)
    The PIO-C interface for the NetCDF function nc_del_att. 
    Definition: pio_nc.c:1705
    
+
    rearr_opt::comp2io
    rearr_comm_fc_opt_t comp2io
    flow control opts, comp to io procs 
    Definition: pio.h:246
    
+
    PIOc_get_vara_uint
    int PIOc_get_vara_uint(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, unsigned int *buf)
    Get a muti-dimensional subset of an unsigned integer variable. 
    Definition: pio_get_nc.c:506
    
+
    file_desc_t
    File descriptor structure. 
    Definition: pio.h:540
    
+
    PIOc_put_att_short
    int PIOc_put_att_short(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const short *op)
    Write a netCDF attribute array of 16-bit integers. 
    Definition: pio_nc.c:3061
    
+
    PIOc_get_var1_text
    int PIOc_get_var1_text(int ncid, int varid, const PIO_Offset *index, char *buf)
    Get one value of a text variable. 
    Definition: pio_get_nc.c:852
    
+
    io_desc_t::rtype
    MPI_Datatype * rtype
    Array (of length nrecvs) of receive MPI types in pio_swapm() call. 
    Definition: pio.h:350
    
+
    PIOc_get_var1
    int PIOc_get_var1(int ncid, int varid, const PIO_Offset *index, void *buf)
    Get one value from a variable the same type as the variable in the file. 
    Definition: pio_get_nc.c:1115
    
+
    PIOc_put_att_float
    int PIOc_put_att_float(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const float *op)
    Write a netCDF attribute array of 32-bit floating points. 
    Definition: pio_nc.c:2969
    
+
    PIOc_Set_IOSystem_Error_Handling
    int PIOc_Set_IOSystem_Error_Handling(int iosysid, int method)
    Set the error handling method used for subsequent calls. 
    Definition: pioc.c:279
    
+
    PIO_REARR_COMM_TYPE
    PIO_REARR_COMM_TYPE
    Rearranger comm type. 
    Definition: pio.h:183
    
+
    PIOc_inq_format
    int PIOc_inq_format(int ncid, int *formatp)
    Learn the netCDF format of an open file. 
    Definition: pio_nc.c:454
    
+
    io_desc_t::num_stypes
    int num_stypes
    Number of send MPI types in pio_swapm() call. 
    Definition: pio.h:356
    
+
    var_desc_t
    struct var_desc_t var_desc_t
    Variable description structure. 
    
+
    PIOc_get_vars_short
    int PIOc_get_vars_short(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, short *buf)
    Get strided, muti-dimensional subset of a 16-bit integer variable. 
    Definition: pio_get_nc.c:145
    
+
    PIOc_get_vara_float
    int PIOc_get_vara_float(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, float *buf)
    Get a muti-dimensional subset of a floating point variable. 
    Definition: pio_get_nc.c:554
    
+
    PIOc_put_var_ushort
    int PIOc_put_var_ushort(int ncid, int varid, const unsigned short *op)
    Put all data to a 16-bit unsigned integer variable. 
    Definition: pio_put_nc.c:967
    
+
    iosystem_desc_t::ioroot
    int ioroot
    Rank of IO root task (which is rank 0 in io_comm) in the union communicator. 
    Definition: pio.h:451
    
+
    PIO_REARR_SUBSET
    Subset rearranger. 
    Definition: pio.h:610
    
+
    PIOc_get_att_double
    int PIOc_get_att_double(int ncid, int varid, const char *name, double *ip)
    Get the value of an 64-bit floating point array attribute. 
    Definition: pio_nc.c:2587
    
+
    PIOc_get_var_ulonglong
    int PIOc_get_var_ulonglong(int ncid, int varid, unsigned long long *buf)
    Get all data of an unsigned 64-bit integer variable. 
    Definition: pio_get_nc.c:815
    
+
    io_desc_t::dimlen
    int * dimlen
    An array of size ndims with the global length of each dimension. 
    Definition: pio.h:288
    
+
    iosystem_desc_t::comproot
    int comproot
    Rank of computation root task (which is rank 0 in comm_comms[cmp]) in the union communicator. 
    Definition: pio.h:456
    
+
    file_desc_t::fh
    int fh
    The ncid returned for this file by the underlying library (netcdf or pnetcdf). 
    Definition: pio.h:547
    
+
    iosystem_desc_t::num_iotasks
    int num_iotasks
    The number of tasks in the IO communicator. 
    Definition: pio.h:420
    
+
    iosystem_desc_t::error_handler
    int error_handler
    Controls handling errors. 
    Definition: pio.h:467
    
+
    PIOc_inq_varid
    int PIOc_inq_varid(int ncid, const char *name, int *varidp)
    The PIO-C interface for the NetCDF function nc_inq_varid. 
    Definition: pio_nc.c:1007
    
+
    PIOc_put_var_uint
    int PIOc_put_var_uint(int ncid, int varid, const unsigned int *op)
    Put all data to an unsigned integer variable. 
    Definition: pio_put_nc.c:1013
    
+
    file_desc_t::pio_ncid
    int pio_ncid
    The ncid that will be returned to the user. 
    Definition: pio.h:550
    
+
    PIOc_inq_unlimdims
    int PIOc_inq_unlimdims(int ncid, int *nunlimdimsp, int *unlimdimidsp)
    Find out the dimension ids of all unlimited dimensions. 
    Definition: pio_nc.c:228
    
+
    PIOc_get_vara_text
    int PIOc_get_vara_text(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, char *buf)
    Get a muti-dimensional subset of a text variable. 
    Definition: pio_get_nc.c:361
    
+
    PIOc_get_var_double
    int PIOc_get_var_double(int ncid, int varid, double *buf)
    Get all data of a 64-bit floating point variable. 
    Definition: pio_get_nc.c:798
    
+
    iosystem_desc_t::union_rank
    int union_rank
    Rank of this task in the union communicator. 
    Definition: pio.h:431
    
+
    io_desc_t::fillregion
    io_region * fillregion
    Used when writing fill data. 
    Definition: pio.h:371
    
+
    PIOc_put_vars_int
    int PIOc_put_vars_int(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const int *op)
    Get strided, muti-dimensional subset of an integer variable. 
    Definition: pio_put_nc.c:200
    
+
    PIOc_set_blocksize
    int PIOc_set_blocksize(int newblocksize)
    Set the target blocksize for the box rearranger. 
    Definition: pioc.c:1662
    
+
    PIOc_get_vara_uchar
    int PIOc_get_vara_uchar(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, unsigned char *buf)
    Get a muti-dimensional subset of an unsigned char variable. 
    Definition: pio_get_nc.c:385
    
+
    PIOc_closefile
    int PIOc_closefile(int ncid)
    Close a file previously opened with PIO. 
    Definition: pio_file.c:200
    
+
    io_desc_t
    struct io_desc_t io_desc_t
    IO descriptor structure. 
    
+
    PIOc_def_var_fill
    int PIOc_def_var_fill(int ncid, int varid, int no_fill, const void *fill_value)
    Set the fill value for a variable. 
    Definition: pio_nc.c:2211
    
+
    iosystem_desc_t::iosysid
    int iosysid
    The ID of this iosystem_desc_t. 
    Definition: pio.h:397
    
+
    PIOc_set_fill
    int PIOc_set_fill(int ncid, int fillmode, int *old_modep)
    The PIO-C interface for the NetCDF function nc_set_fill. 
    Definition: pio_nc.c:1788
    
+
    PIOc_inq_varnatts
    int PIOc_inq_varnatts(int ncid, int varid, int *nattsp)
    Find the number of attributes associated with a variable. 
    Definition: pio_nc.c:986
    
+
    PIOc_iotype_available
    int PIOc_iotype_available(int iotype)
    Return true if this iotype is supported in the build, 0 otherwise. 
    Definition: pioc.c:1221
    
+
    iosystem_desc_t::default_rearranger
    int default_rearranger
    The rearranger decides which parts of a distributed array are handled by which IO tasks...
    Definition: pio.h:471
    
+
    PIOc_write_darray
    int PIOc_write_darray(int ncid, int varid, int ioid, PIO_Offset arraylen, void *array, void *fillvalue)
    Write a distributed array to the output file. 
    Definition: pio_darray.c:598
    
+
    PIOc_get_vara_schar
    int PIOc_get_vara_schar(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, signed char *buf)
    Get a muti-dimensional subset of a signed char variable. 
    Definition: pio_get_nc.c:409
    
+
    PIOc_def_var
    int PIOc_def_var(int ncid, const char *name, nc_type xtype, int ndims, const int *dimidsp, int *varidp)
    The PIO-C interface for the NetCDF function nc_def_var. 
    Definition: pio_nc.c:2008
    
+
    PIO_IOTYPE_PNETCDF
    Parallel Netcdf (parallel) 
    Definition: pio.h:589
    
+
    PIO_INTERNAL_ERROR
    Errors cause abort. 
    Definition: pio.h:619
    
+
    PIOc_inq_varndims
    int PIOc_inq_varndims(int ncid, int varid, int *ndimsp)
    Find the number of dimensions of a variable. 
    Definition: pio_nc.c:954
    
+
    PIOc_put_vara_double
    int PIOc_put_vara_double(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const double *op)
    Put muti-dimensional subset of a 64-bit integer variable. 
    Definition: pio_put_nc.c:874
    
+
    PIOc_get_var1_float
    int PIOc_get_var1_float(int ncid, int varid, const PIO_Offset *index, float *buf)
    Get one value of a floating point variable. 
    Definition: pio_get_nc.c:1014
    
+
    PIOc_init_async
    int PIOc_init_async(MPI_Comm world, int num_io_procs, int *io_proc_list, int component_count, int *num_procs_per_comp, int **proc_list, MPI_Comm *io_comm, MPI_Comm *comp_comm, int rearranger, int *iosysidp)
    Library initialization used when IO tasks are distinct from compute tasks. 
    Definition: pioc.c:1321
    
+
    iosystem_desc_t::io_comm
    MPI_Comm io_comm
    This is an MPI intra communicator that includes all the tasks involved in IO. 
    Definition: pio.h:405
    
+
    file_desc_t::next
    struct file_desc_t * next
    Pointer to the next file_desc_t in the list of open files. 
    Definition: pio.h:575
    
+
    PIOc_put_var1_schar
    int PIOc_put_var1_schar(int ncid, int varid, const PIO_Offset *index, const signed char *op)
    Get one value from an signed char variable. 
    Definition: pio_put_nc.c:400
    
+
    PIOc_put_vara_float
    int PIOc_put_vara_float(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const float *op)
    Put muti-dimensional subset of a floating point variable. 
    Definition: pio_put_nc.c:802
    
+
    io_desc_t::rfrom
    int * rfrom
    Array (length nrecvs) of computation tasks received from. 
    Definition: pio.h:332
    
+
    var_desc_t::request
    int * request
    ID of each outstanding pnetcdf request for this variable. 
    Definition: pio.h:120
    
+
    PIOc_inq_var_deflate
    int PIOc_inq_var_deflate(int ncid, int varid, int *shufflep, int *deflatep, int *deflate_levelp)
    This function only applies to netCDF-4 files. 
    Definition: pio_nc4.c:124
    
+
    PIOc_put_var1_float
    int PIOc_put_var1_float(int ncid, int varid, const PIO_Offset *index, const float *op)
    Get one value from an floating point variable. 
    Definition: pio_put_nc.c:504
    
+
    PIOc_get_var_float
    int PIOc_get_var_float(int ncid, int varid, float *buf)
    Get all data of a floating point variable. 
    Definition: pio_get_nc.c:781
    
+
    PIOc_get_var_longlong
    int PIOc_get_var_longlong(int ncid, int varid, long long *buf)
    Get all data of a 64-bit integer variable. 
    Definition: pio_get_nc.c:832
    
+
    PIOc_get_var1_uint
    int PIOc_get_var1_uint(int ncid, int varid, const PIO_Offset *index, unsigned int *buf)
    Get one value of an unsigned integer variable. 
    Definition: pio_get_nc.c:954
    
+
    PIOc_get_vara
    int PIOc_get_vara(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, void *buf)
    Get a muti-dimensional subset of a variable the same type as the variable in the file. 
    Definition: pio_get_nc.c:1139
    
+
    PIO_REARR_COMM_FC_1D_COMP2IO
    Comp procs to io procs only. 
    Definition: pio.h:202
    
+
    PIOc_put_var1_int
    int PIOc_put_var1_int(int ncid, int varid, const PIO_Offset *index, const int *op)
    Get one value from an integer variable. 
    Definition: pio_put_nc.c:484
    
+
    PIOc_put_vars_double
    int PIOc_put_vars_double(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const double *op)
    Get strided, muti-dimensional subset of a 64-bit floating point variable. 
    Definition: pio_put_nc.c:310
    
+
    PIOc_get_vara_short
    int PIOc_get_vara_short(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, short *buf)
    Get a muti-dimensional subset of a 16-bit integer variable. 
    Definition: pio_get_nc.c:458
    
+
    PIOc_inq_nvars
    int PIOc_inq_nvars(int ncid, int *nvarsp)
    Find out how many variables are defined in a file. 
    Definition: pio_nc.c:180
    
+
    PIOc_inq_dimlen
    int PIOc_inq_dimlen(int ncid, int dimid, PIO_Offset *lenp)
    Find the length of a dimension. 
    Definition: pio_nc.c:653
    
+
    PIOc_put_var
    int PIOc_put_var(int ncid, int varid, const void *buf)
    Put all data to a variable of any type. 
    Definition: pio_put_nc.c:1168
    
+
    io_region::next
    struct io_region * next
    Pointer to the next io_region in the list. 
    Definition: pio.h:176
    
+
    PIO_REARR_COMM_P2P
    Point to point. 
    Definition: pio.h:186
    
+
    wmulti_buffer::recordvar
    int recordvar
    Non-zero if this is a buffer for a record var. 
    Definition: pio.h:507
    
+
    PIOc_put_vars_schar
    int PIOc_put_vars_schar(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const signed char *op)
    Get strided, muti-dimensional subset of a signed char variable. 
    Definition: pio_put_nc.c:90
    
+
    PIOc_get_vars_text
    int PIOc_get_vars_text(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, char *buf)
    Get strided, muti-dimensional subset of a text variable. 
    Definition: pio_get_nc.c:36
    
+
    rearr_comm_fc_opt::max_pend_req
    int max_pend_req
    Max pending requests (PIO_REARR_COMM_UNLIMITED_PEND_REQ => unlimited pend req). 
    Definition: pio.h:231
    
+
    PIOc_put_att_uint
    int PIOc_put_att_uint(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned int *op)
    Write a netCDF attribute array of 32-bit unsigned integers. 
    Definition: pio_nc.c:2946
    
+
    rearr_opt::fcd
    int fcd
    Comm flow control dir - see PIO_REARR_COMM_FC_DIR. 
    Definition: pio.h:243
    
+
    PIOc_inq_dimid
    int PIOc_inq_dimid(int ncid, const char *name, int *idp)
    The PIO-C interface for the NetCDF function nc_inq_dimid. 
    Definition: pio_nc.c:673
    
+
    PIOc_put_vars_text
    int PIOc_put_vars_text(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const char *op)
    Get strided, muti-dimensional subset of a text variable. 
    Definition: pio_put_nc.c:35
    
+
    io_desc_t::ndof
    int ndof
    Local size of the decomposition array on the compute node. 
    Definition: pio.h:281
    
+
    PIOc_def_var_chunking
    int PIOc_def_var_chunking(int ncid, int varid, int storage, const PIO_Offset *chunksizesp)
    Set chunksizes for a variable. 
    Definition: pio_nc4.c:234
    
+
    PIOc_put_var1_long
    int PIOc_put_var1_long(int ncid, int varid, const PIO_Offset *index, const long *ip)
    Get one value from an integer variable. 
    Definition: pio_put_nc.c:524
    
+
    PIOc_get_var_text
    int PIOc_get_var_text(int ncid, int varid, char *buf)
    Get all data of a text variable. 
    Definition: pio_get_nc.c:645
    
+
    PIOc_put_vars_short
    int PIOc_put_vars_short(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const short *op)
    Get strided, muti-dimensional subset of a 16-bit integer variable. 
    Definition: pio_put_nc.c:145
    
+
    rearr_comm_fc_opt::isend
    bool isend
    Enable isends - if false use blocking sends. 
    Definition: pio.h:223
    
+
    PIOc_put_var_uchar
    int PIOc_put_var_uchar(int ncid, int varid, const unsigned char *op)
    Put all data to an unsigned char variable. 
    Definition: pio_put_nc.c:921
    
+
    PIOc_get_var
    int PIOc_get_var(int ncid, int varid, void *buf)
    Get all data from a variable the same type as the variable in the file. 
    Definition: pio_get_nc.c:1094
    
+
    PIOc_put_var1_ushort
    int PIOc_put_var1_ushort(int ncid, int varid, const PIO_Offset *index, const unsigned short *op)
    Get one value from an unsigned 16-bit integer variable. 
    Definition: pio_put_nc.c:421
    
+
    PIOc_put_att
    int PIOc_put_att(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const void *op)
    Write a netCDF attribute of any type. 
    Definition: pio_nc.c:2566
    
+
    file_desc_t::nvars
    int nvars
    Number of variables. 
    Definition: pio.h:559
    
+
    PIOc_put_var1_uint
    int PIOc_put_var1_uint(int ncid, int varid, const PIO_Offset *index, const unsigned int *op)
    Get one value from an unsigned integer variable. 
    Definition: pio_put_nc.c:463
    
+
    PIOc_get_var1_schar
    int PIOc_get_var1_schar(int ncid, int varid, const PIO_Offset *index, signed char *buf)
    Get one value of a signed char variable. 
    Definition: pio_get_nc.c:892
    
+
    PIOc_put_att_uchar
    int PIOc_put_att_uchar(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned char *op)
    Write a netCDF attribute array of 8-bit unsigned chars. 
    Definition: pio_nc.c:2900
    
+
    PIOc_advanceframe
    int PIOc_advanceframe(int ncid, int varid)
    Increment the unlimited dimension of the given variable. 
    Definition: pioc.c:116
    
+
    PIOc_inq_var
    int PIOc_inq_var(int ncid, int varid, char *name, nc_type *xtypep, int *ndimsp, int *dimidsp, int *nattsp)
    The PIO-C interface for the NetCDF function nc_inq_var. 
    Definition: pio_nc.c:765
    
+
    PIOc_inq_attname
    int PIOc_inq_attname(int ncid, int varid, int attnum, char *name)
    The PIO-C interface for the NetCDF function nc_inq_attname. 
    Definition: pio_nc.c:1258
    
+
    iosystem_desc_t::union_comm
    MPI_Comm union_comm
    This is an MPI intra communicator that includes all the tasks in both the IO and the computation comm...
    Definition: pio.h:401
    
+
    PIOc_get_vara_long
    int PIOc_get_vara_long(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, long *buf)
    Get a muti-dimensional subset of a 64-bit integer variable. 
    Definition: pio_get_nc.c:482
    
+
    PIO_REARR_BOX
    Box rearranger. 
    Definition: pio.h:607
    
+
    var_desc_t::pio_type_size
    int pio_type_size
    The size, in bytes, of the PIO data type. 
    Definition: pio.h:139
    
+
    PIOc_inq_att
    int PIOc_inq_att(int ncid, int varid, const char *name, nc_type *xtypep, PIO_Offset *lenp)
    The PIO-C interface for the NetCDF function nc_inq_att. 
    Definition: pio_nc.c:1202
    
+
    rearr_comm_fc_opt_t
    struct rearr_comm_fc_opt rearr_comm_fc_opt_t
    Rearranger comm flow control options. 
    
+
    io_desc_t::next
    struct io_desc_t * next
    Pointer to the next io_desc_t in the list. 
    Definition: pio.h:384
    
+
    PIOc_put_att_int
    int PIOc_put_att_int(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const int *op)
    Write a netCDF attribute array of 32-bit signed integers. 
    Definition: pio_nc.c:2877
    
+
    var_desc_t
    Variable description structure. 
    Definition: pio.h:106
    
+
    PIOc_read_darray
    int PIOc_read_darray(int ncid, int varid, int ioid, PIO_Offset arraylen, void *array)
    Read a field from a file to the IO library. 
    Definition: pio_darray.c:842
    
+
    PIOc_put_var_ulonglong
    int PIOc_put_var_ulonglong(int ncid, int varid, const unsigned long long *op)
    Put all data to an unsigned 64-bit integer variable. 
    Definition: pio_put_nc.c:1105
    
+
    PIOc_get_var1_int
    int PIOc_get_var1_int(int ncid, int varid, const PIO_Offset *index, int *buf)
    Get one value of an integer variable. 
    Definition: pio_get_nc.c:994
    
+
    wmulti_buffer::ioid
    int ioid
    The ID that describes the decomposition, as returned from PIOc_Init_Decomp(). 
    Definition: pio.h:504
    
+
    iosystem_desc_t::ioranks
    int * ioranks
    An array of the ranks of all IO tasks within the union communicator. 
    Definition: pio.h:460
    
+
    var_desc_t::next
    struct var_desc_t * next
    Pointer to next var in list. 
    Definition: pio.h:148
    
+
    PIOc_inq_var_fill
    int PIOc_inq_var_fill(int ncid, int varid, int *no_fill, void *fill_valuep)
    The PIO-C interface for the NetCDF function nc_inq_var_fill. 
    Definition: pio_nc.c:2343
    
+
    PIOc_open
    int PIOc_open(int iosysid, const char *path, int mode, int *ncidp)
    Open an existing file using PIO library. 
    Definition: pio_file.c:81
    
+
    iosystem_desc_t::comp_comm
    MPI_Comm comp_comm
    This is an MPI intra communicator that includes all the tasks involved in computation. 
    Definition: pio.h:409
    
+
    PIO_REARR_COMM_FC_2D_DISABLE
    Disable flow control. 
    Definition: pio.h:208
    
+
    PIOc_get_att
    int PIOc_get_att(int ncid, int varid, const char *name, void *ip)
    Get the value of an attribute of any type, with no type conversion. 
    Definition: pio_nc.c:2523
    
+
    iosystem_desc_t::intercomm
    MPI_Comm intercomm
    This is an MPI inter communicator between IO communicator and computation communicator. 
    Definition: pio.h:413
    
+
    PIOc_put_vara_schar
    int PIOc_put_vara_schar(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const signed char *op)
    Put muti-dimensional subset of a signed char variable. 
    Definition: pio_put_nc.c:658
    
+
    PIOc_get_att_float
    int PIOc_get_att_float(int ncid, int varid, const char *name, float *ip)
    Get the value of an 32-bit floating point array attribute. 
    Definition: pio_nc.c:2809
    
+
    io_desc_t::firstregion
    io_region * firstregion
    Linked list of regions. 
    Definition: pio.h:368
    
+
    PIOc_get_att_ushort
    int PIOc_get_att_ushort(int ncid, int varid, const char *name, unsigned short *ip)
    Get the value of an 16-bit unsigned integer array attribute. 
    Definition: pio_nc.c:2627
    
+
    rearr_opt_t
    struct rearr_opt rearr_opt_t
    Rearranger options. 
    
+
    wmulti_buffer::arraylen
    int arraylen
    Size of this variables data on local task. 
    Definition: pio.h:516
    
+
    file_desc_t::varlist
    struct var_desc_t * varlist
    List of variables in this file. 
    Definition: pio.h:556
    
+
    PIOc_get_var1_ushort
    int PIOc_get_var1_ushort(int ncid, int varid, const PIO_Offset *index, unsigned short *buf)
    Get one value of an unsigned 16-bit integer variable. 
    Definition: pio_get_nc.c:912
    
+
    PIOc_put_vars_longlong
    int PIOc_put_vars_longlong(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const long long *op)
    Get strided, muti-dimensional subset of a 64-bit unsigned integer variable. 
    Definition: pio_put_nc.c:282
    
+
    PIOc_get_var1_short
    int PIOc_get_var1_short(int ncid, int varid, const PIO_Offset *index, short *buf)
    Get one value of a 16-bit integer variable. 
    Definition: pio_get_nc.c:932
    
+
    PIOc_put_var_longlong
    int PIOc_put_var_longlong(int ncid, int varid, const long long *op)
    Put all data to a 64-bit integer variable. 
    Definition: pio_put_nc.c:1128
    
+
    var_desc_t::use_fill
    int use_fill
    Non-zero if fill mode is turned on for this var. 
    Definition: pio.h:129
    
+
    rearr_comm_fc_opt
    Rearranger comm flow control options. 
    Definition: pio.h:217
    
+
    io_desc_t::remap
    int * remap
    If the map passed in is not monotonically increasing then map is sorted and remap is an array of orig...
    Definition: pio.h:274
    
+
    PIOc_get_vars_float
    int PIOc_get_vars_float(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, float *buf)
    Get strided, muti-dimensional subset of a floating point variable. 
    Definition: pio_get_nc.c:253
    
+
    PIOc_put_var1_ulonglong
    int PIOc_put_var1_ulonglong(int ncid, int varid, const PIO_Offset *index, const unsigned long long *op)
    Get one value from an unsigned 64-bit integer variable. 
    Definition: pio_put_nc.c:565
    
+
    PIOc_put_var1_longlong
    int PIOc_put_var1_longlong(int ncid, int varid, const PIO_Offset *index, const long long *op)
    Get one value from a 64-bit integer variable. 
    Definition: pio_put_nc.c:586
    
+
    PIOc_Init_Intracomm
    int PIOc_Init_Intracomm(MPI_Comm comp_comm, int num_iotasks, int stride, int base, int rearr, int *iosysidp)
    Library initialization used when IO tasks are a subset of compute tasks. 
    Definition: pioc.c:838
    
+
    PIOc_get_att_schar
    int PIOc_get_att_schar(int ncid, int varid, const char *name, signed char *ip)
    Get the value of an 8-bit signed char array attribute. 
    Definition: pio_nc.c:2709
    
+
    PIOc_openfile
    int PIOc_openfile(int iosysid, int *ncidp, int *iotype, const char *fname, int mode)
    Open an existing file using PIO library. 
    Definition: pio_file.c:33
    
+
    PIOc_get_vara_double
    int PIOc_get_vara_double(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, double *buf)
    Get a muti-dimensional subset of a 64-bit floating point variable. 
    Definition: pio_get_nc.c:578
    
+
    PIOc_redef
    int PIOc_redef(int ncid)
    The PIO-C interface for the NetCDF function nc_redef. 
    Definition: pio_nc.c:1897
    
+
    PIOc_get_att_ulonglong
    int PIOc_get_att_ulonglong(int ncid, int varid, const char *name, unsigned long long *ip)
    Get the value of an 64-bit unsigned integer array attribute. 
    Definition: pio_nc.c:2729
    
+
    PIO_ERROR_HANDLERS
    PIO_ERROR_HANDLERS
    These are the supported error handlers. 
    Definition: pio.h:616
    
+
    PIOc_inq_atttype
    int PIOc_inq_atttype(int ncid, int varid, const char *name, nc_type *xtypep)
    Get the type of an attribute. 
    Definition: pio_nc.c:1237
    
+
    PIOc_get_var1_long
    int PIOc_get_var1_long(int ncid, int varid, const PIO_Offset *index, long *buf)
    Get one value of a 64-bit integer variable. 
    Definition: pio_get_nc.c:974
    
+
    iosystem_desc_t::comp_rank
    int comp_rank
    The rank of this process in the computation communicator, or -1 if this process is not part of the co...
    Definition: pio.h:435
    
+
    PIOc_get_att_short
    int PIOc_get_att_short(int ncid, int varid, const char *name, short *ip)
    Get the value of an 16-bit integer array attribute. 
    Definition: pio_nc.c:2749
    
+
    file_desc_t::do_io
    int do_io
    True if this task should participate in IO (only true for one task with netcdf serial files...
    Definition: pio.h:579
    
+
    PIOc_inq_vartype
    int PIOc_inq_vartype(int ncid, int varid, nc_type *xtypep)
    Find the type of a variable. 
    Definition: pio_nc.c:938
    
+
    io_desc_t::mpitype
    MPI_Datatype mpitype
    The MPI type of the data. 
    Definition: pio.h:316
    
+
    PIOc_get_vara_ushort
    int PIOc_get_vara_ushort(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, unsigned short *buf)
    Get a muti-dimensional subset of an unsigned 16-bit integer variable. 
    Definition: pio_get_nc.c:434
    
+
    PIOc_InitDecomp
    int PIOc_InitDecomp(int iosysid, int pio_type, int ndims, const int *gdimlen, int maplen, const PIO_Offset *compmap, int *ioidp, const int *rearr, const PIO_Offset *iostart, const PIO_Offset *iocount)
    Initialize the decomposition used with distributed arrays. 
    Definition: pioc.c:444
    
+
    PIOc_put_vara_int
    int PIOc_put_vara_int(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const int *op)
    Put muti-dimensional subset of an integer variable. 
    Definition: pio_put_nc.c:754
    
+
    PIOc_inq
    int PIOc_inq(int ncid, int *ndimsp, int *nvarsp, int *ngattsp, int *unlimdimidp)
    The PIO-C interface for the NetCDF function nc_inq. 
    Definition: pio_nc.c:38
    
+
    PIOc_put_att_ulonglong
    int PIOc_put_att_ulonglong(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned long long *op)
    Write a netCDF attribute array of 64-bit unsigned integers. 
    Definition: pio_nc.c:2992
    
+
    wmulti_buffer
    struct wmulti_buffer wmulti_buffer
    The multi buffer holds data from one or more variables. 
    
+
    PIOc_get_var1_ulonglong
    int PIOc_get_var1_ulonglong(int ncid, int varid, const PIO_Offset *index, unsigned long long *buf)
    Get one value of an unsigned 64-bit integer variable. 
    Definition: pio_get_nc.c:1054
    
+
    PIOc_put_vara
    int PIOc_put_vara(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const void *buf)
    Put muti-dimensional subset of a variable of any type. 
    Definition: pio_put_nc.c:1211
    
+
    PIOc_get_att_int
    int PIOc_get_att_int(int ncid, int varid, const char *name, int *ip)
    Get the value of an 32-bit integer array attribute. 
    Definition: pio_nc.c:2769
    
+
    file_desc_t::iobuf
    void * iobuf
    Data buffer for this file. 
    Definition: pio.h:569
    
+
    iosystem_desc_t::io_rank
    int io_rank
    The rank of this process in the IO communicator, or -1 if this process is not part of the IO communic...
    Definition: pio.h:439
    
+
    io_desc_t::ioid
    int ioid
    The ID of this io_desc_t. 
    Definition: pio.h:261
    
+
    iosystem_desc_t::num_comptasks
    int num_comptasks
    The number of tasks in the computation communicator. 
    Definition: pio.h:423
    
+
    PIO_REARR_COMM_FC_2D_ENABLE
    Comp procs to io procs and vice versa. 
    Definition: pio.h:199
    
+
    PIOc_put_var_double
    int PIOc_put_var_double(int ncid, int varid, const double *op)
    Put all data to a 64-bit floating point variable. 
    Definition: pio_put_nc.c:1151
    
+
    PIOc_InitDecomp_bc
    int PIOc_InitDecomp_bc(int iosysid, int basetype, int ndims, const int *gdimlen, const long int *start, const long int *count, int *ioidp)
    This is a simplified initdecomp which can be used if the memory order of the data can be expressed in...
    Definition: pioc.c:735
    
+
    PIOc_put_var_float
    int PIOc_put_var_float(int ncid, int varid, const float *op)
    Put all data to a floating point variable. 
    Definition: pio_put_nc.c:1082
    
+
    PIOc_get_var_uint
    int PIOc_get_var_uint(int ncid, int varid, unsigned int *buf)
    Get all data of an unsigned integer variable. 
    Definition: pio_get_nc.c:730
    
+
    PIOc_get_var_short
    int PIOc_get_var_short(int ncid, int varid, short *buf)
    Get all data of a 16-bit integer variable. 
    Definition: pio_get_nc.c:713
    
+
    PIOc_finalize
    int PIOc_finalize(int iosysid)
    Clean up internal data structures, free MPI resources, and exit the pio library. 
    Definition: pioc.c:1068
    
+
    io_desc_t::stype
    MPI_Datatype * stype
    Array of send MPI types in pio_swapm() call. 
    Definition: pio.h:353
    
+
    io_desc_t::rearranger
    int rearranger
    The rearranger in use for this variable. 
    Definition: pio.h:294
    
+
    io_desc_t::ndims
    int ndims
    All vars included in this io_desc_t have the same number of dimensions. 
    Definition: pio.h:285
    
+
    PIOc_put_vara_short
    int PIOc_put_vara_short(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const short *op)
    Put muti-dimensional subset of a 16-bit integer variable. 
    Definition: pio_put_nc.c:706
    
+
    iosystem_desc_t::my_comm
    MPI_Comm my_comm
    This is a copy (but not an MPI copy) of either the comp (for non-async) or the union (for async) comm...
    Definition: pio.h:417
    
+
    PIOc_inq_varname
    int PIOc_inq_varname(int ncid, int varid, char *name)
    Get the name of a variable. 
    Definition: pio_nc.c:922
    
+
    PIO_REARR_COMM_COLL
    Collective. 
    Definition: pio.h:189
    
+
    io_desc_t::subset_comm
    MPI_Comm subset_comm
    In the subset communicator each io task is associated with a unique group of comp tasks this is the c...
    Definition: pio.h:381
    
+
    PIOc_set_buffer_size_limit
    PIO_Offset PIOc_set_buffer_size_limit(PIO_Offset limit)
    Set the PIO IO node data buffer size limit. 
    Definition: pio_darray.c:39
    
+
    iosystem_desc_t::compmaster
    int compmaster
    Set to MPI_ROOT if this task is the master of comp communicator, 0 otherwise. 
    Definition: pio.h:447
    
+
    PIOc_inq_natts
    int PIOc_inq_natts(int ncid, int *ngattsp)
    Find out how many global attributes are defined in a file. 
    Definition: pio_nc.c:194
    
+
    PIOc_get_var1_longlong
    int PIOc_get_var1_longlong(int ncid, int varid, const PIO_Offset *index, long long *buf)
    Get one value of a 64-bit integer variable. 
    Definition: pio_get_nc.c:1075
    
+
    file_desc_t::iosystem
    iosystem_desc_t * iosystem
    The IO system ID used to open this file. 
    Definition: pio.h:543
    
+
    PIOc_inq_attid
    int PIOc_inq_attid(int ncid, int varid, const char *name, int *idp)
    The PIO-C interface for the NetCDF function nc_inq_attid. 
    Definition: pio_nc.c:1350
    
+
    io_desc_t::maplen
    int maplen
    The length of the decomposition map. 
    Definition: pio.h:264
    
+
    wmulti_buffer::frame
    int * frame
    An array of current record numbers, for record vars. 
    Definition: pio.h:523
    
+
    PIOc_put_var_schar
    int PIOc_put_var_schar(int ncid, int varid, const signed char *op)
    Put all data to a signed char variable. 
    Definition: pio_put_nc.c:944
    
+
    iosystem_desc_t::async
    bool async
    True if asynchronous interface is in use. 
    Definition: pio.h:474
    
+
    wmulti_buffer
    The multi buffer holds data from one or more variables. 
    Definition: pio.h:500
    
+
    PIO_BCAST_ERROR
    Error codes are broadcast to all tasks. 
    Definition: pio.h:622
    
+
    file_desc_t::iotype
    int iotype
    The IOTYPE value that was used to open this file. 
    Definition: pio.h:553
    
+
    PIOc_createfile
    int PIOc_createfile(int iosysid, int *ncidp, int *iotype, const char *fname, int mode)
    Create a new file using pio. 
    Definition: pio_file.c:126
    
+
    var_desc_t::fillbuf
    void * fillbuf
    Buffer that contains the holegrid fill values used to fill in missing sections of data when using the...
    Definition: pio.h:133
    
+
    PIOc_get_local_array_size
    int PIOc_get_local_array_size(int ioid)
    Get the local size of the variable. 
    Definition: pioc.c:257
    
+
    PIOc_get_vara_longlong
    int PIOc_get_vara_longlong(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, long long *buf)
    Get a muti-dimensional subset of a 64-bit integer variable. 
    Definition: pio_get_nc.c:627
    
+
    PIOc_get_chunk_cache
    int PIOc_get_chunk_cache(int iosysid, int iotype, PIO_Offset *sizep, PIO_Offset *nelemsp, float *preemptionp)
    Get current file chunk cache settings from HDF5. 
    Definition: pio_nc4.c:756
    
+
    PIOc_inq_attlen
    int PIOc_inq_attlen(int ncid, int varid, const char *name, PIO_Offset *lenp)
    Get the length of an attribute. 
    Definition: pio_nc.c:1220
    
+
    wmulti_buffer::next
    struct wmulti_buffer * next
    Pointer to the next multi-buffer in the list. 
    Definition: pio.h:532
    
+
    PIOc_put_vara_uchar
    int PIOc_put_vara_uchar(int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const unsigned char *op)
    Put muti-dimensional subset of an unsigned char variable. 
    Definition: pio_put_nc.c:634
    
+
    PIOc_rename_var
    int PIOc_rename_var(int ncid, int varid, const char *name)
    The PIO-C interface for the NetCDF function nc_rename_var. 
    Definition: pio_nc.c:1526
    
+
    PIOc_get_var_chunk_cache
    int PIOc_get_var_chunk_cache(int ncid, int varid, PIO_Offset *sizep, PIO_Offset *nelemsp, float *preemptionp)
    Get the variable chunk cache settings. 
    Definition: pio_nc4.c:961
    
+
    var_desc_t::pio_type
    int pio_type
    The PIO data type. 
    Definition: pio.h:136
    
+
    PIOc_get_var_uchar
    int PIOc_get_var_uchar(int ncid, int varid, unsigned char *buf)
    Get all data of an unsigned char variable. 
    Definition: pio_get_nc.c:662
    
+
    io_region
    IO region structure. 
    Definition: pio.h:163
    
+
    iosystem_desc_t::iomaster
    int iomaster
    Set to MPI_ROOT if this task is the master of IO communicator, 0 otherwise. 
    Definition: pio.h:443
    
+
    PIOc_put_att_ushort
    int PIOc_put_att_ushort(int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned short *op)
    Write a netCDF attribute array of 16-bit unsigned integers. 
    Definition: pio_nc.c:3015
    
+
    PIOc_put_var1_short
    int PIOc_put_var1_short(int ncid, int varid, const PIO_Offset *index, const short *op)
    Get one value from a 16-bit integer variable. 
    Definition: pio_put_nc.c:442
    
+
    PIO_REARR_COMM_FC_DIR
    PIO_REARR_COMM_FC_DIR
    Rearranger comm flow control direction. 
    Definition: pio.h:196
    
+
    file_desc_t::writable
    int writable
    True if file can be written to. 
    Definition: pio.h:562
    
+
    iosystem_desc_t::compproc
    bool compproc
    True if this task is a member of a computation communicator. 
    Definition: pio.h:481
    
+
    PIO_IOTYPE_NETCDF4P
    NetCDF4 (HDF5) parallel. 
    Definition: pio.h:598
    
+
    PIOc_get_var1_uchar
    int PIOc_get_var1_uchar(int ncid, int varid, const PIO_Offset *index, unsigned char *buf)
    Get one value of an unsinged char variable. 
    Definition: pio_get_nc.c:872
    
+
    io_desc_t
    IO descriptor structure. 
    Definition: pio.h:258
    
+
    PIOc_get_att_longlong
    int PIOc_get_att_longlong(int ncid, int varid, const char *name, long long *ip)
    Get the value of an 64-bit integer array attribute. 
    Definition: pio_nc.c:2789
    
+
    PIOc_put_var_text
    int PIOc_put_var_text(int ncid, int varid, const char *op)
    Put all data to a text variable. 
    Definition: pio_put_nc.c:898
    
+
    PIOc_iosystem_is_active
    int PIOc_iosystem_is_active(int iosysid, bool *active)
    Check to see if PIO has been initialized. 
    Definition: pioc.c:33
    
+
    io_desc_t::scount
    int * scount
    Array (length numiotasks) of data counts to send to each task in the communication in pio_swapm()...
    Definition: pio.h:340
    
+
    io_region::loffset
    int loffset
    The offset from the beginning of the data buffer to the beginning of this region. ...
    Definition: pio.h:167
    
+
    PIOc_put_var_short
    int PIOc_put_var_short(int ncid, int varid, const short *op)
    Put all data to a 16-bit integer variable. 
    Definition: pio_put_nc.c:990
    
+
    wmulti_buffer::data
    void * data
    Pointer to the data. 
    Definition: pio.h:529
    
+
    iosystem_desc_t::rearr_opts
    rearr_opt_t rearr_opts
    Rearranger options. 
    Definition: pio.h:490
    
+
    io_region
    struct io_region io_region
    IO region structure. 
    
+
    wmulti_buffer::num_arrays
    int num_arrays
    Number of arrays of data in the multibuffer. 
    Definition: pio.h:512
    
+
    PIOc_iam_iotask
    int PIOc_iam_iotask(int iosysid, bool *ioproc)
    Return a logical indicating whether this task is an IO task. 
    Definition: pioc.c:1178
    
+
    io_desc_t::rearr_opts
    rearr_opt_t rearr_opts
    Rearranger flow control options (handshake, non-blocking sends, pending requests) ...
    Definition: pio.h:376
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:07 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pio__darray_8c.html b/docs/pio__darray_8c.html
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+++ b/docs/pio__darray_8c.html
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+
+
+
+
+
+
+
+PIO: pio_darray.c File Reference
+
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+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
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+
+
+
+
+
+
    
+
    
+
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+
    
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+
    
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+
+
    
+
    
+  
    
+Macros |
+Functions |
+Variables  
    
+  
    
+
    pio_darray.c File Reference
      
    
+
    
+
    
+
+
    Public functions that read and write distributed arrays in PIO.  
+More...
    
+
    #include <config.h>
    
+#include <pio.h>
    
+#include <pio_internal.h>
    
+
    
+Include dependency graph for pio_darray.c:
    
+
    
+
    
+
+
+
+
    
+
    
+
+
+
+
+
+
    
+Macros
    
+#define DARRAY_FILL   1
     
    
+#define DARRAY_DATA   0
     
    
+
+
+
+
+
+
+
+
+
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+
    
+Functions
    PIO_Offset PIOc_set_buffer_size_limit (PIO_Offset limit)
     Set the PIO IO node data buffer size limit.  More...
     
    int PIOc_write_darray_multi (int ncid, const int *varids, int ioid, int nvars, PIO_Offset arraylen, void *array, const int *frame, void **fillvalue, bool flushtodisk)
     Write one or more arrays with the same IO decomposition to the file.  More...
     
    int find_var_fillvalue (file_desc_t *file, int varid, var_desc_t *vdesc)
     Find the fillvalue that should be used for a variable.  More...
     
    int PIOc_write_darray (int ncid, int varid, int ioid, PIO_Offset arraylen, void *array, void *fillvalue)
     Write a distributed array to the output file.  More...
     
    int PIOc_read_darray (int ncid, int varid, int ioid, PIO_Offset arraylen, void *array)
     Read a field from a file to the IO library.  More...
     
    
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+
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+
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+
    
+Variables
    
+PIO_Offset pio_buffer_size_limit = PIO_BUFFER_SIZE
     
    
+void * CN_bpool = NULL
     
    
+PIO_Offset maxusage = 0
     
    
+
    Detailed Description
    
+
    Public functions that read and write distributed arrays in PIO. 
    
+
    When arrays are distributed, each processor holds some of the array. Only by combining the distributed arrays from all processor can the full array be obtained.
    
+
    Author
    Jim Edwards 
    
+
    Function Documentation
    
+
+
    ◆ PIOc_set_buffer_size_limit()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+          
+        
+      
    PIO_Offset PIOc_set_buffer_size_limit (PIO_Offset limit)
    
+
    
+
+
    Set the PIO IO node data buffer size limit. 
    
+
    The pio_buffer_size_limit will only apply to files opened after the setting is changed.
    
+
    Parameters
    
+  
+    
+  
    limitthe size of the buffer on the IO nodes 
    
+  
    
+
    
+
    Returns
    The previous limit setting. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:07 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pio__darray_8c__incl.map b/docs/pio__darray_8c__incl.map
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diff --git a/docs/pio__darray_8c__incl.md5 b/docs/pio__darray_8c__incl.md5
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diff --git a/docs/pio__file_8c.html b/docs/pio__file_8c.html
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--- /dev/null
+++ b/docs/pio__file_8c.html
@@ -0,0 +1,283 @@
+
+
+
+
+
+
+
+PIO: pio_file.c File Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+Functions |
+Variables  
    
+  
    
+
    pio_file.c File Reference
      
    
+
    
+
    
+
+
    PIO File Handling.  
+More...
    
+
    #include <config.h>
    
+#include <pio.h>
    
+#include <pio_internal.h>
    
+
    
+Include dependency graph for pio_file.c:
    
+
    
+
    
+
+
+
+
    
+
    
+
+
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+
+
+
+
+
+
+
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+
+
+
+
+
+
+
+
+
+
+
+
    
+Functions
    int PIOc_openfile (int iosysid, int *ncidp, int *iotype, const char *filename, int mode)
     Open an existing file using PIO library.  More...
     
    int PIOc_openfile2 (int iosysid, int *ncidp, int *iotype, const char *filename, int mode)
     Open an existing file using PIO library.  More...
     
    int PIOc_open (int iosysid, const char *path, int mode, int *ncidp)
     Open an existing file using PIO library.  More...
     
    int PIOc_createfile (int iosysid, int *ncidp, int *iotype, const char *filename, int mode)
     Create a new file using pio.  More...
     
    int PIOc_create (int iosysid, const char *filename, int cmode, int *ncidp)
     Open a new file using pio.  More...
     
    int PIOc_closefile (int ncid)
     Close a file previously opened with PIO.  More...
     
    int PIOc_deletefile (int iosysid, const char *filename)
     Delete a file.  More...
     
    int PIOc_sync (int ncid)
     PIO interface to nc_sync This routine is called collectively by all tasks in the communicator ios.union_comm.  More...
     
    
+
+
+
+
    
+Variables
    
+int pio_next_ncid = 16
     
    
+
    Detailed Description
    
+
    PIO File Handling. 
    
+
    Function Documentation
    
+
+
    ◆ PIOc_closefile()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+          
+        
+      
    int PIOc_closefile (int ncid)
    
+
    
+
+
    Close a file previously opened with PIO. 
    
+
    Parameters
    
+  
+    
+  
    ncidthe file pointer 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_create()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_create (int iosysid, 
    const char * filename, 
    int cmode, 
    int * ncidp 
    )
    
+
    
+
+
    Open a new file using pio. 
    
+
    The default fill mode will be used (FILL for netCDF and netCDF-4 formats, NOFILL for pnetcdf.) Input parameters are read on comp task 0 and ignored elsewhere.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    iosysid: A defined pio system descriptor (input) 
    cmode: The netcdf mode for the create operation. 
    filename: The filename to open 
    ncidp: A pio file descriptor (output) 
    
+  
    
+
    
+
    Returns
    0 for success, error code otherwise.
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_deletefile()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_deletefile (int iosysid, 
    const char * filename 
    )
    
+
    
+
+
    Delete a file. 
    
+
    Parameters
    
+  
+    
+    
+  
    iosysida pio system handle. 
    filenamea filename. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_sync()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+          
+        
+      
    int PIOc_sync (int ncid)
    
+
    
+
+
    PIO interface to nc_sync This routine is called collectively by all tasks in the communicator ios.union_comm. 
    
+
    Refer to the netcdf  documentation.
    
+
    Parameters
    
+  
+    
+  
    ncidthe ncid of the file to sync. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:07 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pio__file_8c__incl.map b/docs/pio__file_8c__incl.map
new file mode 100644
index 00000000000..c1b2a2527d6
--- /dev/null
+++ b/docs/pio__file_8c__incl.map
@@ -0,0 +1,3 @@
+
+
+
diff --git a/docs/pio__file_8c__incl.md5 b/docs/pio__file_8c__incl.md5
new file mode 100644
index 00000000000..8e596f2382f
--- /dev/null
+++ b/docs/pio__file_8c__incl.md5
@@ -0,0 +1 @@
+2c23575695f612e01f974e1120addd72
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diff --git a/docs/pio__get__nc_8c.html b/docs/pio__get__nc_8c.html
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+PIO: pio_get_nc.c File Reference
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    PIO
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+Functions  
    
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    pio_get_nc.c File Reference
      
    
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+
    PIO functions to get data (excluding varm functions).  
+More...
    
+
    #include <config.h>
    
+#include <pio.h>
    
+#include <pio_internal.h>
    
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+Include dependency graph for pio_get_nc.c:
    
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+Functions
    int PIOc_get_vars_text (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, char *buf)
     Get strided, muti-dimensional subset of a text variable.  More...
     
    int PIOc_get_vars_uchar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, unsigned char *buf)
     Get strided, muti-dimensional subset of an unsigned char variable.  More...
     
    int PIOc_get_vars_schar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, signed char *buf)
     Get strided, muti-dimensional subset of a signed char variable.  More...
     
    int PIOc_get_vars_ushort (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, unsigned short *buf)
     Get strided, muti-dimensional subset of an unsigned 16-bit integer variable.  More...
     
    int PIOc_get_vars_short (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, short *buf)
     Get strided, muti-dimensional subset of a 16-bit integer variable.  More...
     
    int PIOc_get_vars_uint (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, unsigned int *buf)
     Get strided, muti-dimensional subset of an unsigned integer variable.  More...
     
    int PIOc_get_vars_int (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, int *buf)
     Get strided, muti-dimensional subset of an integer variable.  More...
     
    int PIOc_get_vars_long (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, long *buf)
     Get strided, muti-dimensional subset of a 64-bit int variable.  More...
     
    int PIOc_get_vars_float (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, float *buf)
     Get strided, muti-dimensional subset of a floating point variable.  More...
     
    int PIOc_get_vars_double (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, double *buf)
     Get strided, muti-dimensional subset of a 64-bit floating point variable.  More...
     
    int PIOc_get_vars_ulonglong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, unsigned long long *buf)
     Get strided, muti-dimensional subset of an unsigned 64-bit int variable.  More...
     
    int PIOc_get_vars_longlong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, long long *buf)
     Get strided, muti-dimensional subset of a 64-bit int variable.  More...
     
    int PIOc_get_vara_text (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, char *buf)
     Get a muti-dimensional subset of a text variable.  More...
     
    int PIOc_get_vara_uchar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, unsigned char *buf)
     Get a muti-dimensional subset of an unsigned char variable.  More...
     
    int PIOc_get_vara_schar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, signed char *buf)
     Get a muti-dimensional subset of a signed char variable.  More...
     
    int PIOc_get_vara_ushort (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, unsigned short *buf)
     Get a muti-dimensional subset of an unsigned 16-bit integer variable.  More...
     
    int PIOc_get_vara_short (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, short *buf)
     Get a muti-dimensional subset of a 16-bit integer variable.  More...
     
    int PIOc_get_vara_long (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, long *buf)
     Get a muti-dimensional subset of a 64-bit integer variable.  More...
     
    int PIOc_get_vara_uint (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, unsigned int *buf)
     Get a muti-dimensional subset of an unsigned integer variable.  More...
     
    int PIOc_get_vara_int (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, int *buf)
     Get a muti-dimensional subset of an integer variable.  More...
     
    int PIOc_get_vara_float (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, float *buf)
     Get a muti-dimensional subset of a floating point variable.  More...
     
    int PIOc_get_vara_double (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, double *buf)
     Get a muti-dimensional subset of a 64-bit floating point variable.  More...
     
    int PIOc_get_vara_ulonglong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, unsigned long long *buf)
     Get a muti-dimensional subset of an unsigned 64-bit integer variable.  More...
     
    int PIOc_get_vara_longlong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, long long *buf)
     Get a muti-dimensional subset of a 64-bit integer variable.  More...
     
    int PIOc_get_var_text (int ncid, int varid, char *buf)
     Get all data of a text variable.  More...
     
    int PIOc_get_var_uchar (int ncid, int varid, unsigned char *buf)
     Get all data of an unsigned char variable.  More...
     
    int PIOc_get_var_schar (int ncid, int varid, signed char *buf)
     Get all data of a signed char variable.  More...
     
    int PIOc_get_var_ushort (int ncid, int varid, unsigned short *buf)
     Get all data of an unsigned 16-bit integer variable.  More...
     
    int PIOc_get_var_short (int ncid, int varid, short *buf)
     Get all data of a 16-bit integer variable.  More...
     
    int PIOc_get_var_uint (int ncid, int varid, unsigned int *buf)
     Get all data of an unsigned integer variable.  More...
     
    int PIOc_get_var_int (int ncid, int varid, int *buf)
     Get all data of an integer variable.  More...
     
    int PIOc_get_var_long (int ncid, int varid, long *buf)
     Get all data of a 64-bit integer variable.  More...
     
    int PIOc_get_var_float (int ncid, int varid, float *buf)
     Get all data of a floating point variable.  More...
     
    int PIOc_get_var_double (int ncid, int varid, double *buf)
     Get all data of a 64-bit floating point variable.  More...
     
    int PIOc_get_var_ulonglong (int ncid, int varid, unsigned long long *buf)
     Get all data of an unsigned 64-bit integer variable.  More...
     
    int PIOc_get_var_longlong (int ncid, int varid, long long *buf)
     Get all data of a 64-bit integer variable.  More...
     
    int PIOc_get_var1_text (int ncid, int varid, const PIO_Offset *index, char *buf)
     Get one value of a text variable.  More...
     
    int PIOc_get_var1_uchar (int ncid, int varid, const PIO_Offset *index, unsigned char *buf)
     Get one value of an unsinged char variable.  More...
     
    int PIOc_get_var1_schar (int ncid, int varid, const PIO_Offset *index, signed char *buf)
     Get one value of a signed char variable.  More...
     
    int PIOc_get_var1_ushort (int ncid, int varid, const PIO_Offset *index, unsigned short *buf)
     Get one value of an unsigned 16-bit integer variable.  More...
     
    int PIOc_get_var1_short (int ncid, int varid, const PIO_Offset *index, short *buf)
     Get one value of a 16-bit integer variable.  More...
     
    int PIOc_get_var1_uint (int ncid, int varid, const PIO_Offset *index, unsigned int *buf)
     Get one value of an unsigned integer variable.  More...
     
    int PIOc_get_var1_long (int ncid, int varid, const PIO_Offset *index, long *buf)
     Get one value of a 64-bit integer variable.  More...
     
    int PIOc_get_var1_int (int ncid, int varid, const PIO_Offset *index, int *buf)
     Get one value of an integer variable.  More...
     
    int PIOc_get_var1_float (int ncid, int varid, const PIO_Offset *index, float *buf)
     Get one value of a floating point variable.  More...
     
    int PIOc_get_var1_double (int ncid, int varid, const PIO_Offset *index, double *buf)
     Get one value of a 64-bit floating point variable.  More...
     
    int PIOc_get_var1_ulonglong (int ncid, int varid, const PIO_Offset *index, unsigned long long *buf)
     Get one value of an unsigned 64-bit integer variable.  More...
     
    int PIOc_get_var1_longlong (int ncid, int varid, const PIO_Offset *index, long long *buf)
     Get one value of a 64-bit integer variable.  More...
     
    int PIOc_get_var (int ncid, int varid, void *buf)
     Get all data from a variable the same type as the variable in the file.  More...
     
    int PIOc_get_var1 (int ncid, int varid, const PIO_Offset *index, void *buf)
     Get one value from a variable the same type as the variable in the file.  More...
     
    int PIOc_get_vara (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, void *buf)
     Get a muti-dimensional subset of a variable the same type as the variable in the file.  More...
     
    int PIOc_get_vars (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, void *buf)
     Get strided, muti-dimensional subset of a variable of the same type as the variable in the file.  More...
     
    
+
    Detailed Description
    
+
    PIO functions to get data (excluding varm functions). 
    
+
    Author
    Ed Hartnett 
    
+
    Date
    2016
    
+
    See also
    http://code.google.com/p/parallelio/ 
    
+
    Function Documentation
    
+
+
    ◆ PIOc_get_var()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var (int ncid, 
    int varid, 
    void * buf 
    )
    
+
    
+
+
    Get all data from a variable the same type as the variable in the file. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1 (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    void * buf 
    )
    
+
    
+
+
    Get one value from a variable the same type as the variable in the file. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_double (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    double * buf 
    )
    
+
    
+
+
    Get one value of a 64-bit floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_float (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    float * buf 
    )
    
+
    
+
+
    Get one value of a floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_int (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    int * buf 
    )
    
+
    
+
+
    Get one value of an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_long (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    long * buf 
    )
    
+
    
+
+
    Get one value of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_longlong (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    long long * buf 
    )
    
+
    
+
+
    Get one value of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_schar (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    signed char * buf 
    )
    
+
    
+
+
    Get one value of a signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_short (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    short * buf 
    )
    
+
    
+
+
    Get one value of a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_text (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    char * buf 
    )
    
+
    
+
+
    Get one value of a text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_uchar (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    unsigned char * buf 
    )
    
+
    
+
+
    Get one value of an unsinged char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_uint (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    unsigned int * buf 
    )
    
+
    
+
+
    Get one value of an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_ulonglong (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    unsigned long long * buf 
    )
    
+
    
+
+
    Get one value of an unsigned 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var1_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var1_ushort (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    unsigned short * buf 
    )
    
+
    
+
+
    Get one value of an unsigned 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    indexan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_double (int ncid, 
    int varid, 
    double * buf 
    )
    
+
    
+
+
    Get all data of a 64-bit floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_float (int ncid, 
    int varid, 
    float * buf 
    )
    
+
    
+
+
    Get all data of a floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_int (int ncid, 
    int varid, 
    int * buf 
    )
    
+
    
+
+
    Get all data of an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_long (int ncid, 
    int varid, 
    long * buf 
    )
    
+
    
+
+
    Get all data of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_longlong (int ncid, 
    int varid, 
    long long * buf 
    )
    
+
    
+
+
    Get all data of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_schar (int ncid, 
    int varid, 
    signed char * buf 
    )
    
+
    
+
+
    Get all data of a signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_short (int ncid, 
    int varid, 
    short * buf 
    )
    
+
    
+
+
    Get all data of a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_text (int ncid, 
    int varid, 
    char * buf 
    )
    
+
    
+
+
    Get all data of a text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_uchar (int ncid, 
    int varid, 
    unsigned char * buf 
    )
    
+
    
+
+
    Get all data of an unsigned char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_uint (int ncid, 
    int varid, 
    unsigned int * buf 
    )
    
+
    
+
+
    Get all data of an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_ulonglong (int ncid, 
    int varid, 
    unsigned long long * buf 
    )
    
+
    
+
+
    Get all data of an unsigned 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_var_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_ushort (int ncid, 
    int varid, 
    unsigned short * buf 
    )
    
+
    
+
+
    Get all data of an unsigned 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    void * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a variable the same type as the variable in the file. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_double (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    double * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a 64-bit floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_float (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    float * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_int (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    int * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_long (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    long * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_longlong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    long long * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_schar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    signed char * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_short (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    short * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_text (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    char * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of a text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_uchar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    unsigned char * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of an unsigned char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_uint (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    unsigned int * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_ulonglong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    unsigned long long * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of an unsigned 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vara_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vara_ushort (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    unsigned short * buf 
    )
    
+
    
+
+
    Get a muti-dimensional subset of an unsigned 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    void * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a variable of the same type as the variable in the file. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_double (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    double * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 64-bit floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_float (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    float * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_int (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    int * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_long (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    long * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 64-bit int variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_longlong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    long long * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 64-bit int variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_schar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    signed char * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_short (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    short * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_text (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    char * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_uchar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    unsigned char * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_uint (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    unsigned int * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_ulonglong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    unsigned long long * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned 64-bit int variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_vars_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_vars_ushort (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    unsigned short * buf 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:07 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pio__get__nc_8c__incl.map b/docs/pio__get__nc_8c__incl.map
new file mode 100644
index 00000000000..24c5825f982
--- /dev/null
+++ b/docs/pio__get__nc_8c__incl.map
@@ -0,0 +1,3 @@
+
+
+
diff --git a/docs/pio__get__nc_8c__incl.md5 b/docs/pio__get__nc_8c__incl.md5
new file mode 100644
index 00000000000..a7195e55e5a
--- /dev/null
+++ b/docs/pio__get__nc_8c__incl.md5
@@ -0,0 +1 @@
+595252886ce80aa7c163768db26d1574
\ No newline at end of file
diff --git a/docs/pio__get__nc_8c__incl.png b/docs/pio__get__nc_8c__incl.png
new file mode 100644
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z-8?KrJcY1Q(=(7
zS7l!PS4#ZfJm3HEEtX2u1z
xT
+
+
+
+
+
+
+PIO: pio_kinds.F90 File Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+Variables  
    
+  
    
+
    pio_kinds.F90 File Reference
      
    
+
    
+
    
+
+
    basic data types  
+More...
    
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
    
+Variables
    
+integer, parameter, public pio_kinds::char_len = 360
     
    
+integer, parameter, public pio_kinds::log_kind = kind(.true.)
     
    
+integer, parameter, public pio_kinds::int_kind = kind(1)
     
    
+integer, parameter, public pio_kinds::i4 = selected_int_kind(6)
     
    
+integer, parameter, public pio_kinds::i8 = selected_int_kind(13)
     
    
+integer, parameter, public pio_kinds::r4 = selected_real_kind(6)
     
    
+integer, parameter, public pio_kinds::r8 = selected_real_kind(13)
     
    
+integer, parameter, public pio_kinds::pio_offset_kind =MPI_OFFSET_KIND
     
    
+
    Detailed Description
    
+
    basic data types 
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:07 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pio__nc4_8c.html b/docs/pio__nc4_8c.html
new file mode 100644
index 00000000000..1836a9e6671
--- /dev/null
+++ b/docs/pio__nc4_8c.html
@@ -0,0 +1,362 @@
+
+
+
+
+
+
+
+PIO: pio_nc4.c File Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+Functions  
    
+  
    
+
    pio_nc4.c File Reference
      
    
+
    
+
    
+
+
    Functions to wrap netCDF-4 functions for PIO.  
+More...
    
+
    #include <config.h>
    
+#include <pio.h>
    
+#include <pio_internal.h>
    
+
    
+Include dependency graph for pio_nc4.c:
    
+
    
+
    
+
+
+
+
    
+
    
+
+
+
+
+
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+
+
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+
+
+
+
+
+
+
    
+Functions
    int PIOc_def_var_deflate (int ncid, int varid, int shuffle, int deflate, int deflate_level)
     Set deflate (zlib) settings for a variable.  More...
     
    int PIOc_inq_var_deflate (int ncid, int varid, int *shufflep, int *deflatep, int *deflate_levelp)
     This function only applies to netCDF-4 files.  More...
     
    int PIOc_def_var_chunking (int ncid, int varid, int storage, const PIO_Offset *chunksizesp)
     Set chunksizes for a variable.  More...
     
    int PIOc_inq_var_chunking (int ncid, int varid, int *storagep, PIO_Offset *chunksizesp)
     Inquire about chunksizes for a variable.  More...
     
    int PIOc_def_var_endian (int ncid, int varid, int endian)
     Set chunksizes for a variable.  More...
     
    int PIOc_inq_var_endian (int ncid, int varid, int *endianp)
     Inquire about chunksizes for a variable.  More...
     
    int PIOc_set_chunk_cache (int iosysid, int iotype, PIO_Offset size, PIO_Offset nelems, float preemption)
     Set chunk cache netCDF files to be opened/created.  More...
     
    int PIOc_get_chunk_cache (int iosysid, int iotype, PIO_Offset *sizep, PIO_Offset *nelemsp, float *preemptionp)
     Get current file chunk cache settings from HDF5.  More...
     
    int PIOc_set_var_chunk_cache (int ncid, int varid, PIO_Offset size, PIO_Offset nelems, float preemption)
     Set chunksizes for a variable.  More...
     
    int PIOc_get_var_chunk_cache (int ncid, int varid, PIO_Offset *sizep, PIO_Offset *nelemsp, float *preemptionp)
     Get the variable chunk cache settings.  More...
     
    
+
    Detailed Description
    
+
    Functions to wrap netCDF-4 functions for PIO. 
    
+
    Author
    Ed Hartnett 
    
+
    Function Documentation
    
+
+
    ◆ PIOc_get_var_chunk_cache()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_var_chunk_cache (int ncid, 
    int varid, 
    PIO_Offset * sizep, 
    PIO_Offset * nelemsp, 
    float * preemptionp 
    )
    
+
    
+
+
    Get the variable chunk cache settings. 
    
+
    This function only applies to netCDF-4 files. When used with netCDF classic files, the error PIO_ENOTNC4 will be returned.
    
+
    Note that these settings are not part of the data file - they apply only to the open file as long as it is open.
    
+
    See the netCDF variable documentation for details about the operation of this function.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncidthe ncid of the open file. 
    varidthe ID of the variable to set chunksizes for. 
    sizepwill get the size of the cache in bytes. Ignored if NULL. 
    nelemspwill get the number of elements in the cache. Ignored if NULL. 
    preemptionpwill get the cache preemption value. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, otherwise an error code.
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_var_chunking()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_inq_var_chunking (int ncid, 
    int varid, 
    int * storagep, 
    PIO_Offset * chunksizesp 
    )
    
+
    
+
+
    Inquire about chunksizes for a variable. 
    
+
    This function only applies to netCDF-4 files. When used with netCDF classic files, the error PIO_ENOTNC4 will be returned.
    
+
    See the netCDF variable documentation for details about the operation of this function.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncidthe ncid of the open file. 
    varidthe ID of the variable to set chunksizes for. 
    storageppointer to int which will be set to either NC_CONTIGUOUS or NC_CHUNKED. 
    chunksizeppointer to memory where chunksizes will be set. There are the same number of chunksizes as there are dimensions. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, otherwise an error code.
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_var_deflate()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_inq_var_deflate (int ncid, 
    int varid, 
    int * shufflep, 
    int * deflatep, 
    int * deflate_levelp 
    )
    
+
    
+
+
    This function only applies to netCDF-4 files. 
    
+
    When used with netCDF classic files, the error PIO_ENOTNC4 will be returned.
    
+
    Inquire about deflate (zlib compression) settings for a variable.
    
+
    See the netCDF variable documentation for details about the operation of this function.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncidthe ncid of the open file. 
    varidthe ID of the variable to set chunksizes for. 
    shuffleppointer to an int that will get the status of the shuffle filter. Ignored if NULL. 
    deflateppointer to an int that will be set to non-zero if deflation is in use for this variable. Ignored if NULL. 
    deflate_levelppointer to an int that will get the deflation level (from 1-9) if deflation is in use for this variable. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, otherwise an error code.
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_var_endian()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_inq_var_endian (int ncid, 
    int varid, 
    int * endianp 
    )
    
+
    
+
+
    Inquire about chunksizes for a variable. 
    
+
    This function only applies to netCDF-4 files. When used with netCDF classic files, the error PIO_ENOTNC4 will be returned.
    
+
    See the netCDF variable documentation for details about the operation of this function.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncidthe ncid of the open file. 
    varidthe ID of the variable to set chunksizes for. 
    endianppointer to int which will be set to endianness. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, otherwise an error code.
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:07 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pio__nc4_8c__incl.map b/docs/pio__nc4_8c__incl.map
new file mode 100644
index 00000000000..04ddc4432cd
--- /dev/null
+++ b/docs/pio__nc4_8c__incl.map
@@ -0,0 +1,3 @@
+
+
+
diff --git a/docs/pio__nc4_8c__incl.md5 b/docs/pio__nc4_8c__incl.md5
new file mode 100644
index 00000000000..bfa4de3a2c9
--- /dev/null
+++ b/docs/pio__nc4_8c__incl.md5
@@ -0,0 +1 @@
+63ee08315004efb0fa8067fd3498fb70
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+
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+
+
+
+PIO: pio_nc.c File Reference
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+
    
+
    
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+ 
+  
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+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
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+
    
+  
    
+Functions  
    
+  
    
+
    pio_nc.c File Reference
      
    
+
    
+
    
+
+
    PIO interfaces to NetCDF support functions.  
+More...
    
+
    #include <config.h>
    
+#include <pio.h>
    
+#include <pio_internal.h>
    
+
    
+Include dependency graph for pio_nc.c:
    
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+Functions
    int PIOc_inq (int ncid, int *ndimsp, int *nvarsp, int *ngattsp, int *unlimdimidp)
     The PIO-C interface for the NetCDF function nc_inq.  More...
     
    int PIOc_inq_ndims (int ncid, int *ndimsp)
     Find out how many dimensions are defined in the file.  More...
     
    int PIOc_inq_nvars (int ncid, int *nvarsp)
     Find out how many variables are defined in a file.  More...
     
    int PIOc_inq_natts (int ncid, int *ngattsp)
     Find out how many global attributes are defined in a file.  More...
     
    int PIOc_inq_unlimdim (int ncid, int *unlimdimidp)
     Find out the dimension ids of the unlimited dimension.  More...
     
    int PIOc_inq_unlimdims (int ncid, int *nunlimdimsp, int *unlimdimidsp)
     Find out the dimension ids of all unlimited dimensions.  More...
     
    int PIOc_inq_type (int ncid, nc_type xtype, char *name, PIO_Offset *sizep)
     Learn the name and size of a type.  More...
     
    int PIOc_inq_format (int ncid, int *formatp)
     Learn the netCDF format of an open file.  More...
     
    int PIOc_inq_dim (int ncid, int dimid, char *name, PIO_Offset *lenp)
     The PIO-C interface for the NetCDF function nc_inq_dim.  More...
     
    int PIOc_inq_dimname (int ncid, int dimid, char *name)
     Find the name of a dimension.  More...
     
    int PIOc_inq_dimlen (int ncid, int dimid, PIO_Offset *lenp)
     Find the length of a dimension.  More...
     
    int PIOc_inq_dimid (int ncid, const char *name, int *idp)
     The PIO-C interface for the NetCDF function nc_inq_dimid.  More...
     
    int PIOc_inq_var (int ncid, int varid, char *name, nc_type *xtypep, int *ndimsp, int *dimidsp, int *nattsp)
     The PIO-C interface for the NetCDF function nc_inq_var.  More...
     
    int PIOc_inq_varname (int ncid, int varid, char *name)
     Get the name of a variable.  More...
     
    int PIOc_inq_vartype (int ncid, int varid, nc_type *xtypep)
     Find the type of a variable.  More...
     
    int PIOc_inq_varndims (int ncid, int varid, int *ndimsp)
     Find the number of dimensions of a variable.  More...
     
    int PIOc_inq_vardimid (int ncid, int varid, int *dimidsp)
     Find the dimension IDs associated with a variable.  More...
     
    int PIOc_inq_varnatts (int ncid, int varid, int *nattsp)
     Find the number of attributes associated with a variable.  More...
     
    int PIOc_inq_varid (int ncid, const char *name, int *varidp)
     The PIO-C interface for the NetCDF function nc_inq_varid.  More...
     
    int PIOc_inq_att_eh (int ncid, int varid, const char *name, int eh, nc_type *xtypep, PIO_Offset *lenp)
     The PIO-C interface for the NetCDF function nc_inq_att.  More...
     
    int PIOc_inq_att (int ncid, int varid, const char *name, nc_type *xtypep, PIO_Offset *lenp)
     The PIO-C interface for the NetCDF function nc_inq_att.  More...
     
    int PIOc_inq_attlen (int ncid, int varid, const char *name, PIO_Offset *lenp)
     Get the length of an attribute.  More...
     
    int PIOc_inq_atttype (int ncid, int varid, const char *name, nc_type *xtypep)
     Get the type of an attribute.  More...
     
    int PIOc_inq_attname (int ncid, int varid, int attnum, char *name)
     The PIO-C interface for the NetCDF function nc_inq_attname.  More...
     
    int PIOc_inq_attid (int ncid, int varid, const char *name, int *idp)
     The PIO-C interface for the NetCDF function nc_inq_attid.  More...
     
    int PIOc_rename_dim (int ncid, int dimid, const char *name)
     The PIO-C interface for the NetCDF function nc_rename_dim.  More...
     
    int PIOc_rename_var (int ncid, int varid, const char *name)
     The PIO-C interface for the NetCDF function nc_rename_var.  More...
     
    int PIOc_rename_att (int ncid, int varid, const char *name, const char *newname)
     The PIO-C interface for the NetCDF function nc_rename_att.  More...
     
    int PIOc_del_att (int ncid, int varid, const char *name)
     The PIO-C interface for the NetCDF function nc_del_att.  More...
     
    int PIOc_set_fill (int ncid, int fillmode, int *old_modep)
     The PIO-C interface for the NetCDF function nc_set_fill.  More...
     
    int PIOc_enddef (int ncid)
     The PIO-C interface for the NetCDF function nc_enddef.  More...
     
    int PIOc_redef (int ncid)
     The PIO-C interface for the NetCDF function nc_redef.  More...
     
    int PIOc_def_dim (int ncid, const char *name, PIO_Offset len, int *idp)
     The PIO-C interface for the NetCDF function nc_def_dim.  More...
     
    int PIOc_def_var (int ncid, const char *name, nc_type xtype, int ndims, const int *dimidsp, int *varidp)
     The PIO-C interface for the NetCDF function nc_def_var.  More...
     
    int PIOc_def_var_fill (int ncid, int varid, int fill_mode, const void *fill_valuep)
     Set the fill value for a variable.  More...
     
    int PIOc_inq_var_fill (int ncid, int varid, int *no_fill, void *fill_valuep)
     The PIO-C interface for the NetCDF function nc_inq_var_fill.  More...
     
    int PIOc_get_att (int ncid, int varid, const char *name, void *ip)
     Get the value of an attribute of any type, with no type conversion.  More...
     
    int PIOc_put_att (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const void *op)
     Write a netCDF attribute of any type.  More...
     
    int PIOc_get_att_double (int ncid, int varid, const char *name, double *ip)
     Get the value of an 64-bit floating point array attribute.  More...
     
    int PIOc_get_att_uchar (int ncid, int varid, const char *name, unsigned char *ip)
     Get the value of an 8-bit unsigned char array attribute.  More...
     
    int PIOc_get_att_ushort (int ncid, int varid, const char *name, unsigned short *ip)
     Get the value of an 16-bit unsigned integer array attribute.  More...
     
    int PIOc_get_att_uint (int ncid, int varid, const char *name, unsigned int *ip)
     Get the value of an 32-bit unsigned integer array attribute.  More...
     
    int PIOc_get_att_long (int ncid, int varid, const char *name, long *ip)
     Get the value of an 32-bit ingeger array attribute.  More...
     
    int PIOc_get_att_text (int ncid, int varid, const char *name, char *ip)
     Get the value of an text attribute.  More...
     
    int PIOc_get_att_schar (int ncid, int varid, const char *name, signed char *ip)
     Get the value of an 8-bit signed char array attribute.  More...
     
    int PIOc_get_att_ulonglong (int ncid, int varid, const char *name, unsigned long long *ip)
     Get the value of an 64-bit unsigned integer array attribute.  More...
     
    int PIOc_get_att_short (int ncid, int varid, const char *name, short *ip)
     Get the value of an 16-bit integer array attribute.  More...
     
    int PIOc_get_att_int (int ncid, int varid, const char *name, int *ip)
     Get the value of an 32-bit integer array attribute.  More...
     
    int PIOc_get_att_longlong (int ncid, int varid, const char *name, long long *ip)
     Get the value of an 64-bit integer array attribute.  More...
     
    int PIOc_get_att_float (int ncid, int varid, const char *name, float *ip)
     Get the value of an 32-bit floating point array attribute.  More...
     
    int PIOc_put_att_schar (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const signed char *op)
     Write a netCDF attribute array of 8-bit signed chars.  More...
     
    int PIOc_put_att_long (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const long *op)
     Write a netCDF attribute array of 32-bit signed integers.  More...
     
    int PIOc_put_att_int (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const int *op)
     Write a netCDF attribute array of 32-bit signed integers.  More...
     
    int PIOc_put_att_uchar (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned char *op)
     Write a netCDF attribute array of 8-bit unsigned chars.  More...
     
    int PIOc_put_att_longlong (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const long long *op)
     Write a netCDF attribute array of 64-bit signed integers.  More...
     
    int PIOc_put_att_uint (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned int *op)
     Write a netCDF attribute array of 32-bit unsigned integers.  More...
     
    int PIOc_put_att_float (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const float *op)
     Write a netCDF attribute array of 32-bit floating points.  More...
     
    int PIOc_put_att_ulonglong (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned long long *op)
     Write a netCDF attribute array of 64-bit unsigned integers.  More...
     
    int PIOc_put_att_ushort (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const unsigned short *op)
     Write a netCDF attribute array of 16-bit unsigned integers.  More...
     
    int PIOc_put_att_text (int ncid, int varid, const char *name, PIO_Offset len, const char *op)
     Write a netCDF text attribute.  More...
     
    int PIOc_put_att_short (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const short *op)
     Write a netCDF attribute array of 16-bit integers.  More...
     
    int PIOc_put_att_double (int ncid, int varid, const char *name, nc_type xtype, PIO_Offset len, const double *op)
     Write a netCDF attribute array of 64-bit floating points.  More...
     
    
+
    Detailed Description
    
+
    PIO interfaces to NetCDF support functions. 
    
+
    This file provides an interface to the NetCDF support functions. Each subroutine calls the underlying netcdf or pnetcdf or netcdf4 functions from the appropriate subset of mpi tasks (io_comm). Each routine must be called collectively from union_comm.
    
+
    Author
    Jim Edwards (jedwa.nosp@m.rds@.nosp@m.ucar..nosp@m.edu), Ed Hartnett 
    
+
    Date
    Feburary 2014, April 2016 
    
+
    Function Documentation
    
+
+
    ◆ PIOc_del_att()
    
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    int PIOc_del_att (int ncid, 
    int varid, 
    const char * name 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_del_att. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__attributes.html
    
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    Parameters
    
+  
+    
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    varidthe variable ID. 
    nameof the attribute to delete. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. 
    
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    Author
    Jim Edwards, Ed Hartnett 
    
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    ◆ PIOc_inq()
    
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    int PIOc_inq (int ncid, 
    int * ndimsp, 
    int * nvarsp, 
    int * ngattsp, 
    int * unlimdimidp 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_inq. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__datasets.html
    
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    Parameters
    
+  
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile().
    
+  
    
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    Returns
    PIO_NOERR for success, error code otherwise. See PIOc_Set_File_Error_Handling 
    
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    Author
    Jim Edwards, Ed Hartnett 
    
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    ◆ PIOc_inq_attid()
    
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    int PIOc_inq_attid (int ncid, 
    int varid, 
    const char * name, 
    int * idp 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_inq_attid. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__attributes.html
    
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    Parameters
    
+  
+    
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    varidthe variable ID. 
    idpa pointer that will get the id of the variable or attribute. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. See PIOc_Set_File_Error_Handling 
    
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    Author
    Jim Edwards, Ed Hartnett 
    
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+
    
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    ◆ PIOc_inq_atttype()
    
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    int PIOc_inq_atttype (int ncid, 
    int varid, 
    const char * name, 
    nc_type * xtypep 
    )
    
+
    
+
+
    Get the type of an attribute. 
    
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    Parameters
    
+  
+    
+    
+    
+    
+  
    ncidthe ID of an open file. 
    varidthe variable ID, or NC_GLOBAL for global attributes. 
    namethe name of the attribute. 
    xtypepa pointer that gets the type of the attribute. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
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+
    
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    ◆ PIOc_inq_dim()
    
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    int PIOc_inq_dim (int ncid, 
    int dimid, 
    char * name, 
    PIO_Offset * lenp 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_inq_dim. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__dimensions.html
    
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    Parameters
    
+  
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    lenpa pointer that will get the number of values 
    
+  
    
+
    
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    Returns
    PIO_NOERR for success, error code otherwise. See PIOc_Set_File_Error_Handling 
    
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    Author
    Jim Edwards, Ed Hartnett 
    
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    ◆ PIOc_inq_format()
    
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    int PIOc_inq_format (int ncid, 
    int * formatp 
    )
    
+
    
+
+
    Learn the netCDF format of an open file. 
    
+
    Parameters
    
+  
+    
+    
+  
    ncidthe ncid of an open file. 
    formatpa pointer that will get the format. 
    
+  
    
+
    
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    Returns
    0 for success, error code otherwise. 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_type()
    
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    int PIOc_inq_type (int ncid, 
    nc_type xtype, 
    char * name, 
    PIO_Offset * sizep 
    )
    
+
    
+
+
    Learn the name and size of a type. 
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncidthe ncid of the open file. 
    xtypethe type to learn about 
    namepointer that will get the name of the type. 
    sizeppointer that will get the size of the type in bytes. 
    
+  
    
+
    
+
    Returns
    0 for success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_var()
    
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    int PIOc_inq_var (int ncid, 
    int varid, 
    char * name, 
    nc_type * xtypep, 
    int * ndimsp, 
    int * dimidsp, 
    int * nattsp 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_inq_var. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__variables.html
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    varidthe variable ID. 
    xtypepa pointer that will get the type of the attribute. 
    nattspa pointer that will get the number of attributes 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_inq_var_fill()
    
+
+
    
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    int PIOc_inq_var_fill (int ncid, 
    int varid, 
    int * no_fill, 
    void * fill_valuep 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_inq_var_fill. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__variables.html
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    varidthe variable ID. 
    no_filla pointer to int that will get the fill mode. Ignored if NULL (except with pnetcdf, which seg-faults with NULL.) 
    fill_valueppointer to space that gets the fill value for this variable. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise.
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_rename_att()
    
+
+
    
+
    
+      
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+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_rename_att (int ncid, 
    int varid, 
    const char * name, 
    const char * newname 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_rename_att. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__attributes.html
    
+
    Parameters
    
+  
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    varidthe variable ID. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. See PIOc_Set_File_Error_Handling 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_rename_dim()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_rename_dim (int ncid, 
    int dimid, 
    const char * name 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_rename_dim. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__dimensions.html
    
+
    Parameters
    
+  
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. See PIOc_Set_File_Error_Handling 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_rename_var()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_rename_var (int ncid, 
    int varid, 
    const char * name 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_rename_var. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__variables.html
    
+
    Parameters
    
+  
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    varidthe variable ID. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise. See PIOc_Set_File_Error_Handling 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_set_fill()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_set_fill (int ncid, 
    int fillmode, 
    int * old_modep 
    )
    
+
    
+
+
    The PIO-C interface for the NetCDF function nc_set_fill. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm. For more information on the underlying NetCDF commmand please read about this function in the NetCDF documentation at: http://www.unidata.ucar.edu/software/netcdf/docs/group__datasets.html
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncidthe ncid of the open file, obtained from PIOc_openfile() or PIOc_createfile(). 
    fillmodeeither NC_FILL or NC_NOFILL. 
    old_modepa pointer to an int that gets the old setting. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR for success, error code otherwise.
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:07 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pio__nc_8c__incl.map b/docs/pio__nc_8c__incl.map
new file mode 100644
index 00000000000..772dfa8700f
--- /dev/null
+++ b/docs/pio__nc_8c__incl.map
@@ -0,0 +1,3 @@
+
+
+
diff --git a/docs/pio__nc_8c__incl.md5 b/docs/pio__nc_8c__incl.md5
new file mode 100644
index 00000000000..fdce2df7d27
--- /dev/null
+++ b/docs/pio__nc_8c__incl.md5
@@ -0,0 +1 @@
+51decdd51ebc93a0c5ccaa5c9168a776
\ No newline at end of file
diff --git a/docs/pio__nc_8c__incl.png b/docs/pio__nc_8c__incl.png
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zFgPPLdkONfbCrRl#PtTA-pJY4#Kd6WIB5q
+
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+
+
+PIO: pio_put_nc.c File Reference
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+
    
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+ 
+  
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+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
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+
    
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+
    
+  
    
+Functions  
    
+  
    
+
    pio_put_nc.c File Reference
      
    
+
    
+
    
+
+
    PIO functions to write data.  
+More...
    
+
    #include <config.h>
    
+#include <pio.h>
    
+#include <pio_internal.h>
    
+
    
+Include dependency graph for pio_put_nc.c:
    
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+Functions
    int PIOc_put_vars_text (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const char *op)
     Get strided, muti-dimensional subset of a text variable.  More...
     
    int PIOc_put_vars_uchar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const unsigned char *op)
     Get strided, muti-dimensional subset of an unsigned char variable.  More...
     
    int PIOc_put_vars_schar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const signed char *op)
     Get strided, muti-dimensional subset of a signed char variable.  More...
     
    int PIOc_put_vars_ushort (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const unsigned short *op)
     Get strided, muti-dimensional subset of an unsigned 16-bit integer variable.  More...
     
    int PIOc_put_vars_short (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const short *op)
     Get strided, muti-dimensional subset of a 16-bit integer variable.  More...
     
    int PIOc_put_vars_uint (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const unsigned int *op)
     Get strided, muti-dimensional subset of an unsigned integer variable.  More...
     
    int PIOc_put_vars_int (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const int *op)
     Get strided, muti-dimensional subset of an integer variable.  More...
     
    int PIOc_put_vars_long (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const long *op)
     Get strided, muti-dimensional subset of a 64-bit integer variable.  More...
     
    int PIOc_put_vars_float (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const float *op)
     Get strided, muti-dimensional subset of a floating point variable.  More...
     
    int PIOc_put_vars_longlong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const long long *op)
     Get strided, muti-dimensional subset of a 64-bit unsigned integer variable.  More...
     
    int PIOc_put_vars_double (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const double *op)
     Get strided, muti-dimensional subset of a 64-bit floating point variable.  More...
     
    int PIOc_put_vars_ulonglong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const unsigned long long *op)
     Get strided, muti-dimensional subset of an unsigned 64-bit integer variable.  More...
     
    int PIOc_put_var1_text (int ncid, int varid, const PIO_Offset *index, const char *op)
     Get one value from an text variable.  More...
     
    int PIOc_put_var1_uchar (int ncid, int varid, const PIO_Offset *index, const unsigned char *op)
     Get one value from an text variable.  More...
     
    int PIOc_put_var1_schar (int ncid, int varid, const PIO_Offset *index, const signed char *op)
     Get one value from an signed char variable.  More...
     
    int PIOc_put_var1_ushort (int ncid, int varid, const PIO_Offset *index, const unsigned short *op)
     Get one value from an unsigned 16-bit integer variable.  More...
     
    int PIOc_put_var1_short (int ncid, int varid, const PIO_Offset *index, const short *op)
     Get one value from a 16-bit integer variable.  More...
     
    int PIOc_put_var1_uint (int ncid, int varid, const PIO_Offset *index, const unsigned int *op)
     Get one value from an unsigned integer variable.  More...
     
    int PIOc_put_var1_int (int ncid, int varid, const PIO_Offset *index, const int *op)
     Get one value from an integer variable.  More...
     
    int PIOc_put_var1_float (int ncid, int varid, const PIO_Offset *index, const float *op)
     Get one value from an floating point variable.  More...
     
    int PIOc_put_var1_long (int ncid, int varid, const PIO_Offset *index, const long *op)
     Get one value from an integer variable.  More...
     
    int PIOc_put_var1_double (int ncid, int varid, const PIO_Offset *index, const double *op)
     Get one value from an 64-bit floating point variable.  More...
     
    int PIOc_put_var1_ulonglong (int ncid, int varid, const PIO_Offset *index, const unsigned long long *op)
     Get one value from an unsigned 64-bit integer variable.  More...
     
    int PIOc_put_var1_longlong (int ncid, int varid, const PIO_Offset *index, const long long *op)
     Get one value from a 64-bit integer variable.  More...
     
    int PIOc_put_vara_text (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const char *op)
     Put muti-dimensional subset of a text variable.  More...
     
    int PIOc_put_vara_uchar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const unsigned char *op)
     Put muti-dimensional subset of an unsigned char variable.  More...
     
    int PIOc_put_vara_schar (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const signed char *op)
     Put muti-dimensional subset of a signed char variable.  More...
     
    int PIOc_put_vara_ushort (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const unsigned short *op)
     Put muti-dimensional subset of an unsigned 16-bit integer variable.  More...
     
    int PIOc_put_vara_short (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const short *op)
     Put muti-dimensional subset of a 16-bit integer variable.  More...
     
    int PIOc_put_vara_uint (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const unsigned int *op)
     Put muti-dimensional subset of an unsigned integer variable.  More...
     
    int PIOc_put_vara_int (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const int *op)
     Put muti-dimensional subset of an integer variable.  More...
     
    int PIOc_put_vara_long (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const long *op)
     Put muti-dimensional subset of an integer variable.  More...
     
    int PIOc_put_vara_float (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const float *op)
     Put muti-dimensional subset of a floating point variable.  More...
     
    int PIOc_put_vara_ulonglong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const unsigned long long *op)
     Put muti-dimensional subset of an unsigned 64-bit integer variable.  More...
     
    int PIOc_put_vara_longlong (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const long long *op)
     Put muti-dimensional subset of a 64-bit integer variable.  More...
     
    int PIOc_put_vara_double (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const double *op)
     Put muti-dimensional subset of a 64-bit integer variable.  More...
     
    int PIOc_put_var_text (int ncid, int varid, const char *op)
     Put all data to a text variable.  More...
     
    int PIOc_put_var_uchar (int ncid, int varid, const unsigned char *op)
     Put all data to an unsigned char variable.  More...
     
    int PIOc_put_var_schar (int ncid, int varid, const signed char *op)
     Put all data to a signed char variable.  More...
     
    int PIOc_put_var_ushort (int ncid, int varid, const unsigned short *op)
     Put all data to a 16-bit unsigned integer variable.  More...
     
    int PIOc_put_var_short (int ncid, int varid, const short *op)
     Put all data to a 16-bit integer variable.  More...
     
    int PIOc_put_var_uint (int ncid, int varid, const unsigned int *op)
     Put all data to an unsigned integer variable.  More...
     
    int PIOc_put_var_int (int ncid, int varid, const int *op)
     Put all data to an integer variable.  More...
     
    int PIOc_put_var_long (int ncid, int varid, const long *op)
     Put all data to an integer variable.  More...
     
    int PIOc_put_var_float (int ncid, int varid, const float *op)
     Put all data to a floating point variable.  More...
     
    int PIOc_put_var_ulonglong (int ncid, int varid, const unsigned long long *op)
     Put all data to an unsigned 64-bit integer variable.  More...
     
    int PIOc_put_var_longlong (int ncid, int varid, const long long *op)
     Put all data to a 64-bit integer variable.  More...
     
    int PIOc_put_var_double (int ncid, int varid, const double *op)
     Put all data to a 64-bit floating point variable.  More...
     
    int PIOc_put_var (int ncid, int varid, const void *op)
     Put all data to a variable of any type.  More...
     
    int PIOc_put_var1 (int ncid, int varid, const PIO_Offset *index, const void *op)
     Get one value from a variable of any type.  More...
     
    int PIOc_put_vara (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const void *op)
     Put muti-dimensional subset of a variable of any type.  More...
     
    int PIOc_put_vars (int ncid, int varid, const PIO_Offset *start, const PIO_Offset *count, const PIO_Offset *stride, const void *op)
     Write strided, muti-dimensional subset of a variable of any type.  More...
     
    
+
    Detailed Description
    
+
    PIO functions to write data. 
    
+
    Author
    Ed Hartnett 
    
+
    Date
    2016 
    
+
    See also
    http://code.google.com/p/parallelio/ 
    
+
    Function Documentation
    
+
+
    ◆ PIOc_put_var()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var (int ncid, 
    int varid, 
    const void * op 
    )
    
+
    
+
+
    Put all data to a variable of any type. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1 (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const void * op 
    )
    
+
    
+
+
    Get one value from a variable of any type. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_double (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const double * op 
    )
    
+
    
+
+
    Get one value from an 64-bit floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_float (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const float * op 
    )
    
+
    
+
+
    Get one value from an floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_int (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const int * op 
    )
    
+
    
+
+
    Get one value from an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_long (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const long * op 
    )
    
+
    
+
+
    Get one value from an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_longlong (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const long long * op 
    )
    
+
    
+
+
    Get one value from a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_schar (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const signed char * op 
    )
    
+
    
+
+
    Get one value from an signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_short (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const short * op 
    )
    
+
    
+
+
    Get one value from a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_text (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const char * op 
    )
    
+
    
+
+
    Get one value from an text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_uchar (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const unsigned char * op 
    )
    
+
    
+
+
    Get one value from an text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_uint (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const unsigned int * op 
    )
    
+
    
+
+
    Get one value from an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_ulonglong (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const unsigned long long * op 
    )
    
+
    
+
+
    Get one value from an unsigned 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var1_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var1_ushort (int ncid, 
    int varid, 
    const PIO_Offset * index, 
    const unsigned short * op 
    )
    
+
    
+
+
    Get one value from an unsigned 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_double (int ncid, 
    int varid, 
    const double * op 
    )
    
+
    
+
+
    Put all data to a 64-bit floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_float (int ncid, 
    int varid, 
    const float * op 
    )
    
+
    
+
+
    Put all data to a floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_int (int ncid, 
    int varid, 
    const int * op 
    )
    
+
    
+
+
    Put all data to an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_long (int ncid, 
    int varid, 
    const long * op 
    )
    
+
    
+
+
    Put all data to an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_longlong (int ncid, 
    int varid, 
    const long long * op 
    )
    
+
    
+
+
    Put all data to a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_schar (int ncid, 
    int varid, 
    const signed char * op 
    )
    
+
    
+
+
    Put all data to a signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_short (int ncid, 
    int varid, 
    const short * op 
    )
    
+
    
+
+
    Put all data to a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_text (int ncid, 
    int varid, 
    const char * op 
    )
    
+
    
+
+
    Put all data to a text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_uchar (int ncid, 
    int varid, 
    const unsigned char * op 
    )
    
+
    
+
+
    Put all data to an unsigned char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_uint (int ncid, 
    int varid, 
    const unsigned int * op 
    )
    
+
    
+
+
    Put all data to an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_ulonglong (int ncid, 
    int varid, 
    const unsigned long long * op 
    )
    
+
    
+
+
    Put all data to an unsigned 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_var_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_var_ushort (int ncid, 
    int varid, 
    const unsigned short * op 
    )
    
+
    
+
+
    Put all data to a 16-bit unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const void * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of a variable of any type. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_double (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const double * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_float (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const float * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of a floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_int (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const int * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_long (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const long * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_longlong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const long long * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_schar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const signed char * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of a signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_short (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const short * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_text (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const char * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of a text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_uchar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const unsigned char * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of an unsigned char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_uint (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const unsigned int * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_ulonglong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const unsigned long long * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of an unsigned 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vara_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vara_ushort (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const unsigned short * op 
    )
    
+
    
+
+
    Put muti-dimensional subset of an unsigned 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const void * op 
    )
    
+
    
+
+
    Write strided, muti-dimensional subset of a variable of any type. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    bufpointer that will get the data. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_double()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_double (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const double * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 64-bit floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_float()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_float (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const float * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a floating point variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_int()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_int (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const int * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_long()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_long (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const long * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_longlong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_longlong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const long long * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 64-bit unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_schar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_schar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const signed char * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a signed char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_short()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_short (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const short * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_text()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_text (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const char * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of a text variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_uchar()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_uchar (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const unsigned char * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned char variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_uint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_uint (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const unsigned int * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_ulonglong()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_ulonglong (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const unsigned long long * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned 64-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_put_vars_ushort()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_put_vars_ushort (int ncid, 
    int varid, 
    const PIO_Offset * start, 
    const PIO_Offset * count, 
    const PIO_Offset * stride, 
    const unsigned short * op 
    )
    
+
    
+
+
    Get strided, muti-dimensional subset of an unsigned 16-bit integer variable. 
    
+
    This routine is called collectively by all tasks in the communicator ios.union_comm.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    ncididentifies the netCDF file 
    varidthe variable ID number 
    startan array of start indicies (must have same number of entries as variable has dimensions). If NULL, indices of 0 will be used. 
    countan array of counts (must have same number of entries as variable has dimensions). If NULL, counts matching the size of the variable will be used. 
    stridean array of strides (must have same number of entries as variable has dimensions). If NULL, strides of 1 will be used. 
    oppointer to the data to be written. 
    
+  
    
+
    
+
    Returns
    PIO_NOERR on success, error code otherwise. 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pio__put__nc_8c__incl.map b/docs/pio__put__nc_8c__incl.map
new file mode 100644
index 00000000000..062a0319c64
--- /dev/null
+++ b/docs/pio__put__nc_8c__incl.map
@@ -0,0 +1,3 @@
+
+
+
diff --git a/docs/pio__put__nc_8c__incl.md5 b/docs/pio__put__nc_8c__incl.md5
new file mode 100644
index 00000000000..9e58918faa9
--- /dev/null
+++ b/docs/pio__put__nc_8c__incl.md5
@@ -0,0 +1 @@
+226be32c7a18f25ba09b40df8e76b9ff
\ No newline at end of file
diff --git a/docs/pio__put__nc_8c__incl.png b/docs/pio__put__nc_8c__incl.png
new file mode 100644
index 0000000000000000000000000000000000000000..2ed85798dfc552dbd84f355355feb005ff194023
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diff --git a/docs/pio__support_8_f90.html b/docs/pio__support_8_f90.html
new file mode 100644
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--- /dev/null
+++ b/docs/pio__support_8_f90.html
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+
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+
+
+
+
+
+PIO: pio_support.F90 File Reference
+
+
+
+
+
+
+
+
+
+
+
+
    
+  
    
+Functions/Subroutines |
+Variables  
    
+  
    
+
    pio_support.F90 File Reference
      
    
+
    
+
    
+
+
    internal code for compiler workarounds, aborts and debug functions  
+More...
    
+
+
+
+
+
+
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+
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+
    
+Functions/Subroutines
    subroutine, public pio_support::replace_c_null (istr, ilen)
     Remove null termination (C-style) from strings for Fortran.  More...
     
    subroutine, public pio_support::piodie (file, line, msg, ival1, msg2, ival2, msg3, ival3, mpirank)
     Abort the model for abnormal termination.  More...
     
    subroutine, public pio_support::checkmpireturn (locmesg, errcode, file, line)
     Check and prints an error message if an error occured in an MPI subroutine.  More...
     
    subroutine, public pio_support::pio_writedof (file, gdims, DOF, comm, punit)
     Fortran interface to write a mapping file.  More...
     
    subroutine, public pio_support::pio_readdof (file, ndims, gdims, DOF, comm, punit)
     Fortran interface to read a mapping file.  More...
     
    
+
+
+
+
+
+
+
+
    
+Variables
    
+logical, public pio_support::debug =.FALSE.
     
    
+logical, public pio_support::debugio =.FALSE.
     
    
+logical, public pio_support::debugasync =.FALSE.
     
    
+
    Detailed Description
    
+
    internal code for compiler workarounds, aborts and debug functions 
    
+
    Function/Subroutine Documentation
    
+
+
    ◆ checkmpireturn()
    
+
+
    
+
    
+      
+        
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+      
    subroutine, public pio_support::checkmpireturn (character(len=*), intent(in) locmesg, 
    integer(i4), intent(in) errcode, 
    character(len=*), optional file, 
    integer, intent(in), optional line 
    )
    
+
    
+
+
    Check and prints an error message if an error occured in an MPI subroutine. 
    
+
    Parameters
    
+  
+    
+    
+    
+    
+  
    locmesg: Message to output 
    errcode: MPI error code 
    file: The file where the error message originated. 
    line: The line number where the error message originated. 
    
+  
    
+
    
+
+
    
+
    
+
+
    ◆ pio_readdof()
    
+
+
    
+
    
+      
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+      
    subroutine, public pio_support::pio_readdof (character(len=*), intent(in) file, 
    integer, intent(out) ndims, 
    integer, dimension(:), pointer gdims, 
    integer(pio_offset_kind), dimension(:), pointer DOF, 
    integer, intent(in) comm, 
    integer, intent(in), optional punit 
    )
    
+
    
+
+
    Fortran interface to read a mapping file. 
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+  
    file: The file from where the decomp map is read. 
    ndims: The number of dimensions of the data. 
    gdims: The actual dimensions of the data (pointer to an integer array of length ndims). 
    DOF: Pointer to an integer array where the Decomp map will be stored. 
    comm: MPI comm index 
    punit: Optional argument that is no longer used. 
    
+  
    
+
    
+
+
    
+
    
+
+
    ◆ pio_writedof()
    
+
+
    
+
    
+      
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+      
    subroutine, public pio_support::pio_writedof (character(len=*), intent(in) file, 
    integer, dimension(:), intent(in) gdims, 
    integer(pio_offset_kind), dimension(:), intent(in) DOF, 
    integer, intent(in) comm, 
    integer, intent(in), optional punit 
    )
    
+
    
+
+
    Fortran interface to write a mapping file. 
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    file: The file where the decomp map will be written. 
    gdims: The dimensions of the data array in memory. 
    DOF: The multidimensional array of indexes that describes how data in memory are written to a file. 
    comm: The MPI comm index. 
    punit: Optional argument that is no longer used. 
    
+  
    
+
    
+
+
    
+
    
+
+
    ◆ piodie()
    
+
+
    
+
    
+      
+        
+          
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+      
    subroutine, public pio_support::piodie (character(len=*), intent(in) file, 
    integer, intent(in) line, 
    character(len=*), intent(in), optional msg, 
    integer, intent(in), optional ival1, 
    character(len=*), intent(in), optional msg2, 
    integer, intent(in), optional ival2, 
    character(len=*), intent(in), optional msg3, 
    integer, intent(in), optional ival3, 
    integer, intent(in), optional mpirank 
    )
    
+
    
+
+
    Abort the model for abnormal termination. 
    
+
    Parameters
    
+  
+    
+    
+    
+  
    file: File where piodie is called from. 
    line: Line number where it is called. 
    msg,msg2,msg3,ival1,ival2,ival3,mpirank: Optional argument for error messages. 
    
+  
    
+
    
+
+
    
+
    
+
+
    ◆ replace_c_null()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
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+      
    subroutine, public pio_support::replace_c_null (character(len=*), intent(inout) istr, 
    integer(kind=pio_offset_kind), intent(in), optional ilen 
    )
    
+
    
+
+
    Remove null termination (C-style) from strings for Fortran. 
    
+
+
    
+
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pio__types_8_f90.html b/docs/pio__types_8_f90.html
new file mode 100644
index 00000000000..3de7089b17f
--- /dev/null
+++ b/docs/pio__types_8_f90.html
@@ -0,0 +1,205 @@
+
+
+
+
+
+
+
+PIO: pio_types.F90 File Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
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+
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+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+Data Types |
+Variables  
    
+  
    
+
    pio_types.F90 File Reference
      
    
+
    
+
    
+
+
    Derived datatypes and constants for PIO Fortran API.  
+More...
    
+
+
+
+
+
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+
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+
+
+
    
+Data Types
    type  pio_types::decompmap_t
     
    type  pio_types::iosystem_desc_t
     A defined PIO system descriptor created by PIO_init (see pio_types)  More...
     
    type  pio_types::file_desc_t
     File descriptor returned by PIO_openfile or PIO_createfile (see pio_types)  More...
     
    type  pio_types::io_desc_t
     An io descriptor handle that is generated in PIO_initdecomp (see pio_types)  More...
     
    type  pio_types::var_desc_t
     A variable descriptor returned from PIO_def_var (see pio_types)  More...
     
    type  pio_types::pio_rearr_comm_fc_opt_t
     
    type  pio_types::pio_rearr_opt_t
     
    
+
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+
+
+
+
+
+
    
+Variables
    
+integer(i4), parameter, public pio_types::pio_iotype_pnetcdf = 1
     
    
+integer(i4), parameter, public pio_types::pio_iotype_netcdf = 2
     
    
+integer(i4), parameter, public pio_types::pio_iotype_netcdf4c = 3
     
    
+integer(i4), parameter, public pio_types::pio_iotype_netcdf4p = 4
     
    
+integer(i4), parameter, public pio_types::iotype_pnetcdf = PIO_iotype_pnetcdf
     
    
+integer(i4), parameter, public pio_types::iotype_netcdf = PIO_iotype_netcdf
     
    
+integer(i4), parameter, public pio_types::pio_rearr_box = 1
     
    
+integer(i4), parameter, public pio_types::pio_rearr_subset = 2
     
    
+integer(i4), parameter, public pio_types::pio_internal_error = -51
     
    
+integer(i4), parameter, public pio_types::pio_bcast_error = -52
     
    
+integer(i4), parameter, public pio_types::pio_return_error = -53
     
    
+integer(i4), parameter, public pio_types::pio_default = -1
     
    
+integer, parameter, public pio_types::pio_global = 0
     
    
+integer, parameter, public pio_types::pio_double = 6
     
    
+integer, parameter, public pio_types::pio_real = 5
     
    
+integer, parameter, public pio_types::pio_int = 4
     
    
+integer, parameter, public pio_types::pio_char = 2
     
    
+integer, parameter, public pio_types::pio_noerr = 0
     
    
+integer, parameter, public pio_types::pio_max_name = 25
     
    
+integer, parameter, public pio_types::pio_max_var_dims = 6
     
    
+integer, parameter, public pio_types::pio_clobber = 10
     
    
+integer, parameter, public pio_types::pio_noclobber = 11
     
    
+integer, parameter, public pio_types::pio_write = 20
     
    
+integer, parameter, public pio_types::pio_nowrite = 21
     
    
+integer, parameter, public pio_types::pio_64bit_offset = 0
     
    
+integer, parameter, public pio_types::pio_64bit_data = 0
     
    
+integer, parameter, public pio_types::pio_fill_int = -2147483647
     
    
+real, parameter, public pio_types::pio_fill_float = 9.9692099683868690e+36
     
    
+double precision, parameter, public pio_types::pio_fill_double = 9.9692099683868690e+36
     
    
+integer, parameter, public pio_types::pio_num_ost = 16
     
    
+integer, parameter, public pio_types::pio_rearr_comm_unlimited_pend_req = -1
     
    
+
    Detailed Description
    
+
    Derived datatypes and constants for PIO Fortran API. 
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pioc_8c.html b/docs/pioc_8c.html
new file mode 100644
index 00000000000..10876cf1abb
--- /dev/null
+++ b/docs/pioc_8c.html
@@ -0,0 +1,617 @@
+
+
+
+
+
+
+
+PIO: pioc.c File Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
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+
+
+
+
+
    
+
    
+
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+
    
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+
    
+
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+
    
+
    
+  
    
+Functions |
+Variables  
    
+  
    
+
    pioc.c File Reference
      
    
+
    
+
    
+
+
    Some initialization and support functions.  
+More...
    
+
    #include <config.h>
    
+#include <pio.h>
    
+#include <pio_internal.h>
    
+
    
+Include dependency graph for pioc.c:
    
+
    
+
    
+
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+
    
+
    
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+
    
+Functions
    int PIOc_iosystem_is_active (int iosysid, bool *active)
     Check to see if PIO has been initialized.  More...
     
    int PIOc_File_is_Open (int ncid)
     Check to see if PIO file is open.  More...
     
    int PIOc_Set_File_Error_Handling (int ncid, int method)
     Set the error handling method to be used for subsequent pio library calls, returns the previous method setting.  More...
     
    int PIOc_advanceframe (int ncid, int varid)
     Increment the unlimited dimension of the given variable.  More...
     
    int PIOc_setframe (int ncid, int varid, int frame)
     Set the unlimited dimension of the given variable.  More...
     
    int PIOc_get_numiotasks (int iosysid, int *numiotasks)
     Get the number of IO tasks set.  More...
     
    int PIOc_get_local_array_size (int ioid)
     Get the local size of the variable.  More...
     
    int PIOc_Set_IOSystem_Error_Handling (int iosysid, int method)
     Set the error handling method used for subsequent calls.  More...
     
    int PIOc_set_iosystem_error_handling (int iosysid, int method, int *old_method)
     Set the error handling method used for subsequent calls for this IO system.  More...
     
    
+void pio_map_sort (const PIO_Offset *map, int *remap, int maplen)
     
    int PIOc_InitDecomp (int iosysid, int pio_type, int ndims, const int *gdimlen, int maplen, const PIO_Offset *compmap, int *ioidp, const int *rearranger, const PIO_Offset *iostart, const PIO_Offset *iocount)
     Initialize the decomposition used with distributed arrays.  More...
     
    int PIOc_init_decomp (int iosysid, int pio_type, int ndims, const int *gdimlen, int maplen, const PIO_Offset *compmap, int *ioidp, int rearranger, const PIO_Offset *iostart, const PIO_Offset *iocount)
     Initialize the decomposition used with distributed arrays.  More...
     
    int PIOc_InitDecomp_bc (int iosysid, int pio_type, int ndims, const int *gdimlen, const long int *start, const long int *count, int *ioidp)
     This is a simplified initdecomp which can be used if the memory order of the data can be expressed in terms of start and count on the file.  More...
     
    int PIOc_Init_Intracomm (MPI_Comm comp_comm, int num_iotasks, int stride, int base, int rearr, int *iosysidp)
     Library initialization used when IO tasks are a subset of compute tasks.  More...
     
    int PIOc_Init_Intracomm_from_F90 (int f90_comp_comm, const int num_iotasks, const int stride, const int base, const int rearr, rearr_opt_t *rearr_opts, int *iosysidp)
     Interface to call from pio_init from fortran.  More...
     
    int PIOc_set_hint (int iosysid, const char *hint, const char *hintval)
     Send a hint to the MPI-IO library.  More...
     
    int PIOc_finalize (int iosysid)
     Clean up internal data structures, free MPI resources, and exit the pio library.  More...
     
    int PIOc_iam_iotask (int iosysid, bool *ioproc)
     Return a logical indicating whether this task is an IO task.  More...
     
    int PIOc_iotask_rank (int iosysid, int *iorank)
     Return the rank of this task in the IO communicator or -1 if this task is not in the communicator.  More...
     
    int PIOc_iotype_available (int iotype)
     Return true if this iotype is supported in the build, 0 otherwise.  More...
     
    int PIOc_init_async (MPI_Comm world, int num_io_procs, int *io_proc_list, int component_count, int *num_procs_per_comp, int **proc_list, MPI_Comm *user_io_comm, MPI_Comm *user_comp_comm, int rearranger, int *iosysidp)
     Library initialization used when IO tasks are distinct from compute tasks.  More...
     
    int PIOc_set_blocksize (int newblocksize)
     Set the target blocksize for the box rearranger.  More...
     
    
+
+
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+
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+
+
+
+
+
    
+Variables
    int default_error_handler = PIO_INTERNAL_ERROR
     The default error handler used when iosystem cannot be located.  More...
     
    int blocksize
     The target blocksize for each io task when the box rearranger is used (see pio_sc.c).  More...
     
    
+int pio_next_ioid = 512
     
    
+
    Detailed Description
    
+
    Some initialization and support functions. 
    
+
    Author
    Jim Edwards 
    
+
    Date
    2014
    
+
    See also
    http://code.google.com/p/parallelio/ 
    
+
    Function Documentation
    
+
+
    ◆ PIOc_advanceframe()
    
+
+
    
+
    
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+        
+      
    int PIOc_advanceframe (int ncid, 
    int varid 
    )
    
+
    
+
+
    Increment the unlimited dimension of the given variable. 
    
+
    Parameters
    
+  
+    
+    
+  
    ncidthe ncid of the open file 
    varidthe variable ID 
    
+  
    
+
    
+
    Returns
    0 on success, error code otherwise 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_File_is_Open()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+          
+        
+      
    int PIOc_File_is_Open (int ncid)
    
+
    
+
+
    Check to see if PIO file is open. 
    
+
    Parameters
    
+  
+    
+  
    ncidthe ncid of an open file 
    
+  
    
+
    
+
    Returns
    1 if file is open, 0 otherwise. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_local_array_size()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+          
+        
+      
    int PIOc_get_local_array_size (int ioid)
    
+
    
+
+
    Get the local size of the variable. 
    
+
    Parameters
    
+  
+    
+  
    ioidIO descrption ID. 
    
+  
    
+
    
+
    Returns
    the size of the array. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ PIOc_get_numiotasks()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_get_numiotasks (int iosysid, 
    int * numiotasks 
    )
    
+
    
+
+
    Get the number of IO tasks set. 
    
+
    Parameters
    
+  
+    
+    
+  
    iosysidthe IO system ID 
    numiotasksa pointer taht gets the number of IO tasks. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    0 on success, error code otherwise 
    
+
    Author
    Ed Hartnett 
    
+
+
    
+
    
+
+
    ◆ PIOc_iam_iotask()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_iam_iotask (int iosysid, 
    bool * ioproc 
    )
    
+
    
+
+
    Return a logical indicating whether this task is an IO task. 
    
+
    Parameters
    
+  
+    
+    
+  
    iosysidthe io system ID 
    ioproca pointer that gets 1 if task is an IO task, 0 otherwise. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    0 for success, or PIO_BADID if iosysid can't be found. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ PIOc_Init_Intracomm_from_F90()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_Init_Intracomm_from_F90 (int f90_comp_comm, 
    const int num_iotasks, 
    const int stride, 
    const int base, 
    const int rearr, 
    rearr_opt_t * rearr_opts, 
    int * iosysidp 
    )
    
+
    
+
+
    Interface to call from pio_init from fortran. 
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+    
+  
    f90_comp_comm
    num_iotasksthe number of IO tasks 
    stridethe stride to use assigning tasks 
    basethe starting point when assigning tasks 
    rearrthe rearranger 
    rearr_optsthe rearranger options 
    iosysidpa pointer that gets the IO system ID 
    
+  
    
+
    
+
    Returns
    0 for success, error code otherwise 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ PIOc_iosystem_is_active()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_iosystem_is_active (int iosysid, 
    bool * active 
    )
    
+
    
+
+
    Check to see if PIO has been initialized. 
    
+
    Parameters
    
+  
+    
+    
+  
    iosysidthe IO system ID 
    activepointer that gets true if IO system is active, false otherwise. 
    
+  
    
+
    
+
    Returns
    0 on success, error code otherwise 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ PIOc_iotask_rank()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_iotask_rank (int iosysid, 
    int * iorank 
    )
    
+
    
+
+
    Return the rank of this task in the IO communicator or -1 if this task is not in the communicator. 
    
+
    Parameters
    
+  
+    
+    
+  
    iosysidthe io system ID 
    ioranka pointer that gets the io rank, or -1 if task is not in the IO communicator. Ignored if NULL. 
    
+  
    
+
    
+
    Returns
    0 for success, or PIO_BADID if iosysid can't be found. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ PIOc_iotype_available()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+          
+        
+      
    int PIOc_iotype_available (int iotype)
    
+
    
+
+
    Return true if this iotype is supported in the build, 0 otherwise. 
    
+
    Parameters
    
+  
+    
+  
    iotypethe io type to check 
    
+  
    
+
    
+
    Returns
    1 if iotype is in build, 0 if not. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ PIOc_set_hint()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int PIOc_set_hint (int iosysid, 
    const char * hint, 
    const char * hintval 
    )
    
+
    
+
+
    Send a hint to the MPI-IO library. 
    
+
    Parameters
    
+  
+    
+    
+    
+  
    iosysidthe IO system ID 
    hintthe hint for MPI 
    hintvalthe value of the hint 
    
+  
    
+
    
+
    Returns
    0 for success, or PIO_BADID if iosysid can't be found. 
    
+
    Author
    Jim Edwards, Ed Hartnett 
    
+
+
    
+
    
+
    Variable Documentation
    
+
+
    ◆ blocksize
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int blocksize
    
+
    
+
+
    The target blocksize for each io task when the box rearranger is used (see pio_sc.c). 
    
+
    The target blocksize for each io task when the box rearranger is used (see pio_sc.c). 
    
+
+
    
+
    
+
+
    ◆ default_error_handler
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int default_error_handler = PIO_INTERNAL_ERROR
    
+
    
+
+
    The default error handler used when iosystem cannot be located. 
    
+
+
    
+
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pioc_8c__incl.map b/docs/pioc_8c__incl.map
new file mode 100644
index 00000000000..f7a9a58b468
--- /dev/null
+++ b/docs/pioc_8c__incl.map
@@ -0,0 +1,3 @@
+
+
+
diff --git a/docs/pioc_8c__incl.md5 b/docs/pioc_8c__incl.md5
new file mode 100644
index 00000000000..44ef435ef9e
--- /dev/null
+++ b/docs/pioc_8c__incl.md5
@@ -0,0 +1 @@
+769b50a5d327e407d948e99f79e1b727
\ No newline at end of file
diff --git a/docs/pioc_8c__incl.png b/docs/pioc_8c__incl.png
new file mode 100644
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+
+
+
+
+
+
+PIO: pioc_sc.c File Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+Macros |
+Functions |
+Variables  
    
+  
    
+
    pioc_sc.c File Reference
      
    
+
    
+
    
+
+
    Compute start and count arrays for the box rearranger.  
+More...
    
+
    #include <config.h>
    
+#include <pio.h>
    
+#include <pio_internal.h>
    
+
    
+Include dependency graph for pioc_sc.c:
    
+
    
+
    
+
+
+
+
    
+
    
+
+
+
+
+
    
+Macros
    #define DEFAULT_BLOCKSIZE   1024
     The default target blocksize in bytes for each io task when the box rearranger is used.  More...
     
    
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
    
+Functions
    int gcd (int a, int b)
     Recursive Standard C Function: Greatest Common Divisor.  More...
     
    long long lgcd (long long a, long long b)
     Recursive Standard C Function: Greatest Common Divisor for 64 bit ints.  More...
     
    long long lgcd_array (int nain, long long *ain)
     Return the greatest common devisor of array ain as int_64.  More...
     
    void compute_one_dim (int gdim, int ioprocs, int rank, PIO_Offset *start, PIO_Offset *count)
     Compute one element (dimension) of start and count arrays.  More...
     
    PIO_Offset GCDblocksize (int arrlen, const PIO_Offset *arr_in)
     Look for the largest block of data for io which can be expressed in terms of start and count.  More...
     
    int CalcStartandCount (int pio_type, int ndims, const int *gdims, int num_io_procs, int myiorank, PIO_Offset *start, PIO_Offset *count, int *num_aiotasks)
     Compute start and count values for each io task.  More...
     
    
+
+
+
+
+
    
+Variables
    int blocksize = DEFAULT_BLOCKSIZE
     The target blocksize for each io task when the box rearranger is used.  More...
     
    
+
    Detailed Description
    
+
    Compute start and count arrays for the box rearranger. 
    
+
    Author
    Jim Edwards 
    
+
    Date
    2014 
    
+
    Macro Definition Documentation
    
+
+
    ◆ DEFAULT_BLOCKSIZE
    
+
+
    
+
    
+      
+        
+          
+        
+      
    #define DEFAULT_BLOCKSIZE   1024
    
+
    
+
+
    The default target blocksize in bytes for each io task when the box rearranger is used. 
    
+
+
    
+
    
+
    Function Documentation
    
+
+
    ◆ CalcStartandCount()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int CalcStartandCount (int pio_type, 
    int ndims, 
    const int * gdims, 
    int num_io_procs, 
    int myiorank, 
    PIO_Offset * start, 
    PIO_Offset * count, 
    int * num_aiotasks 
    )
    
+
    
+
+
    Compute start and count values for each io task. 
    
+
    This is used in PIOc_InitDecomp() for the box rearranger only.
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+    
+    
+  
    pio_typethe PIO data type used in this decompotion. 
    ndimsthe number of dimensions in the variable, not including the unlimited dimension. 
    gdimsan array of global size of each dimension. 
    num_io_procsthe number of IO tasks. 
    myiorankrank of this task in IO communicator. 
    startarray of length ndims with data start values. 
    countarray of length ndims with data count values. 
    num_aiotasksthe number of IO tasks used(?) 
    
+  
    
+
    
+
    Returns
    0 for success, error code otherwise. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ compute_one_dim()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    void compute_one_dim (int gdim, 
    int ioprocs, 
    int rank, 
    PIO_Offset * start, 
    PIO_Offset * count 
    )
    
+
    
+
+
    Compute one element (dimension) of start and count arrays. 
    
+
    This function is used by CalcStartandCount().
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+  
    gdimglobal size of one dimension. 
    ioprocsnumber of io tasks. 
    rankIO rank of this task. 
    startpointer to PIO_Offset that will get the start value. 
    countpointer to PIO_Offset that will get the count value. 
    
+  
    
+
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ gcd()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    int gcd (int a, 
    int b 
    )
    
+
    
+
+
    Recursive Standard C Function: Greatest Common Divisor. 
    
+
    Parameters
    
+  
+    
+    
+  
    a
    b
    
+  
    
+
    
+
    Returns
    greatest common divisor. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ GCDblocksize()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    PIO_Offset GCDblocksize (int arrlen, 
    const PIO_Offset * arr_in 
    )
    
+
    
+
+
    Look for the largest block of data for io which can be expressed in terms of start and count. 
    
+
    Parameters
    
+  
+    
+    
+  
    arrlen
    arr_in
    
+  
    
+
    
+
    Returns
    the size of the block 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ lgcd()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    long long lgcd (long long a, 
    long long b 
    )
    
+
    
+
+
    Recursive Standard C Function: Greatest Common Divisor for 64 bit ints. 
    
+
    Parameters
    
+  
+    
+    
+  
    a
    b
    
+  
    
+
    
+
    Returns
    greates common divisor. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
+
    ◆ lgcd_array()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+          
+        
+        
+          
+          
+          
+        
+      
    long long lgcd_array (int nain, 
    long long * ain 
    )
    
+
    
+
+
    Return the greatest common devisor of array ain as int_64. 
    
+
    Parameters
    
+  
+    
+    
+  
    nainnumber of elements in ain. 
    ainarray of length nain. 
    
+  
    
+
    
+
    Returns
    GCD of elements in ain. 
    
+
    Author
    Jim Edwards 
    
+
+
    
+
    
+
    Variable Documentation
    
+
+
    ◆ blocksize
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int blocksize = DEFAULT_BLOCKSIZE
    
+
    
+
+
    The target blocksize for each io task when the box rearranger is used. 
    
+
    The target blocksize for each io task when the box rearranger is used (see pio_sc.c).
    
+
+
    
+
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pioc__sc_8c__incl.map b/docs/pioc__sc_8c__incl.map
new file mode 100644
index 00000000000..75bc259e318
--- /dev/null
+++ b/docs/pioc__sc_8c__incl.map
@@ -0,0 +1,3 @@
+
+
+
diff --git a/docs/pioc__sc_8c__incl.md5 b/docs/pioc__sc_8c__incl.md5
new file mode 100644
index 00000000000..a4582cd6edd
--- /dev/null
+++ b/docs/pioc__sc_8c__incl.md5
@@ -0,0 +1 @@
+6e99ac4c0948b65e46ca58d438859b9e
\ No newline at end of file
diff --git a/docs/pioc__sc_8c__incl.png b/docs/pioc__sc_8c__incl.png
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+PIO: piodarray.F90 File Reference
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+   
    PIO
+    2.4.0
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+  
    
+Data Types |
+Macros |
+Functions/Subroutines  
    
+  
    
+
    piodarray.F90 File Reference
      
    
+
    
+
    
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+
    Read and write routines for decomposed data.  
+More...
    
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+Data Types
    interface  piodarray::PIOc_write_darray_multi
     
    interface  piodarray::PIOc_read_darray
     
    
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+Macros
    
+#define __PIO_FILE__   'piodarray'
     
    
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+Functions/Subroutines
    
+subroutine, public piodarray::pio_set_buffer_size_limit (limit)
     
    
+subroutine piodarray::write_darray_1d_cinterface_real (File, varDesc, ioDesc, arraylen, array, iostat, fillval)
     
    
+subroutine piodarray::write_darray_1d_cinterface_int (File, varDesc, ioDesc, arraylen, array, iostat, fillval)
     
    
+subroutine piodarray::write_darray_1d_cinterface_double (File, varDesc, ioDesc, arraylen, array, iostat, fillval)
     
    
+subroutine piodarray::write_darray_multi_1d_cinterface_real (File, varDesc, ioDesc, nvars, arraylen, array, iostat, fillval)
     
    
+subroutine piodarray::write_darray_multi_1d_cinterface_int (File, varDesc, ioDesc, nvars, arraylen, array, iostat, fillval)
     
    
+subroutine piodarray::write_darray_multi_1d_cinterface_double (File, varDesc, ioDesc, nvars, arraylen, array, iostat, fillval)
     
    subroutine piodarray::write_darray_multi_1d_real (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 1D array of type real.  More...
     
    subroutine piodarray::write_darray_multi_1d_int (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 1D array of type int.  More...
     
    subroutine piodarray::write_darray_multi_1d_double (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 1D array of type double.  More...
     
    subroutine piodarray::write_darray_2d_real (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 2D array of type real.  More...
     
    subroutine piodarray::write_darray_3d_real (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 3D array of type real.  More...
     
    subroutine piodarray::write_darray_4d_real (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 4D array of type real.  More...
     
    subroutine piodarray::write_darray_5d_real (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 5D array of type real.  More...
     
    subroutine piodarray::write_darray_6d_real (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 6D array of type real.  More...
     
    subroutine piodarray::write_darray_7d_real (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 7D array of type real.  More...
     
    subroutine piodarray::write_darray_2d_int (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 2D array of type int.  More...
     
    subroutine piodarray::write_darray_3d_int (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 3D array of type int.  More...
     
    subroutine piodarray::write_darray_4d_int (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 4D array of type int.  More...
     
    subroutine piodarray::write_darray_5d_int (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 5D array of type int.  More...
     
    subroutine piodarray::write_darray_6d_int (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 6D array of type int.  More...
     
    subroutine piodarray::write_darray_7d_int (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 7D array of type int.  More...
     
    subroutine piodarray::write_darray_2d_double (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 2D array of type double.  More...
     
    subroutine piodarray::write_darray_3d_double (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 3D array of type double.  More...
     
    subroutine piodarray::write_darray_4d_double (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 4D array of type double.  More...
     
    subroutine piodarray::write_darray_5d_double (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 5D array of type double.  More...
     
    subroutine piodarray::write_darray_6d_double (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 6D array of type double.  More...
     
    subroutine piodarray::write_darray_7d_double (File, varDesc, ioDesc, array, iostat, fillval)
     Writes a 7D array of type double.  More...
     
    subroutine piodarray::read_darray_1d_real (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type real from a netCDF variable of 1 dimension(s).  More...
     
    subroutine piodarray::read_darray_2d_real (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type real from a netCDF variable of 2 dimension(s).  More...
     
    subroutine piodarray::read_darray_3d_real (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type real from a netCDF variable of 3 dimension(s).  More...
     
    subroutine piodarray::read_darray_4d_real (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type real from a netCDF variable of 4 dimension(s).  More...
     
    subroutine piodarray::read_darray_5d_real (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type real from a netCDF variable of 5 dimension(s).  More...
     
    subroutine piodarray::read_darray_6d_real (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type real from a netCDF variable of 6 dimension(s).  More...
     
    subroutine piodarray::read_darray_7d_real (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type real from a netCDF variable of 7 dimension(s).  More...
     
    subroutine piodarray::read_darray_1d_int (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type int from a netCDF variable of 1 dimension(s).  More...
     
    subroutine piodarray::read_darray_2d_int (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type int from a netCDF variable of 2 dimension(s).  More...
     
    subroutine piodarray::read_darray_3d_int (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type int from a netCDF variable of 3 dimension(s).  More...
     
    subroutine piodarray::read_darray_4d_int (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type int from a netCDF variable of 4 dimension(s).  More...
     
    subroutine piodarray::read_darray_5d_int (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type int from a netCDF variable of 5 dimension(s).  More...
     
    subroutine piodarray::read_darray_6d_int (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type int from a netCDF variable of 6 dimension(s).  More...
     
    subroutine piodarray::read_darray_7d_int (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type int from a netCDF variable of 7 dimension(s).  More...
     
    subroutine piodarray::read_darray_1d_double (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type double from a netCDF variable of 1 dimension(s).  More...
     
    subroutine piodarray::read_darray_2d_double (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type double from a netCDF variable of 2 dimension(s).  More...
     
    subroutine piodarray::read_darray_3d_double (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type double from a netCDF variable of 3 dimension(s).  More...
     
    subroutine piodarray::read_darray_4d_double (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type double from a netCDF variable of 4 dimension(s).  More...
     
    subroutine piodarray::read_darray_5d_double (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type double from a netCDF variable of 5 dimension(s).  More...
     
    subroutine piodarray::read_darray_6d_double (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type double from a netCDF variable of 6 dimension(s).  More...
     
    subroutine piodarray::read_darray_7d_double (File, varDesc, ioDesc, array, iostat)
     Read distributed array of type double from a netCDF variable of 7 dimension(s).  More...
     
    
+subroutine piodarray::read_darray_internal_real (ncid, varid, ioid, alen, array, iostat)
     
    
+subroutine piodarray::read_darray_internal_int (ncid, varid, ioid, alen, array, iostat)
     
    
+subroutine piodarray::read_darray_internal_double (ncid, varid, ioid, alen, array, iostat)
     
    
+
    Detailed Description
    
+
    Read and write routines for decomposed data. 
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/piolib__mod_8_f90.html b/docs/piolib__mod_8_f90.html
new file mode 100644
index 00000000000..a78314f9a36
--- /dev/null
+++ b/docs/piolib__mod_8_f90.html
@@ -0,0 +1,359 @@
+
+
+
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+
+PIO: piolib_mod.F90 File Reference
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+
    
+
    
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+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
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+
    
+  
    
+Data Types |
+Macros |
+Functions/Subroutines  
    
+  
    
+
    piolib_mod.F90 File Reference
      
    
+
    
+
    
+
+
    Initialization Routines for PIO.  
+More...
    
+
+
+
+
+
+
+
+
+
    
+Macros
    
+#define __PIO_FILE__   "piolib_mod.f90"
     
    
+#define debug_rearr   0
     
    
+#define fptr(arg)   arg
     
    
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+Functions/Subroutines
    logical function, public piolib_mod::pio_file_is_open (File)
     This logical function indicates if a file is open.  More...
     
    integer function, public piolib_mod::pio_get_local_array_size (iodesc)
     This function returns the expected local size of an array associated with iodesc.  More...
     
    subroutine piolib_mod::advanceframe (file, vardesc)
     advances the record dimension of a variable in a netcdf format file or the block address in a binary file  More...
     
    subroutine piolib_mod::setframe (file, vardesc, frame)
     sets the record dimension of a variable in a netcdf format file or the block address in a binary file  More...
     
    subroutine piolib_mod::setdebuglevel (level)
     sets the level of debug information output to stdout by pio  More...
     
    subroutine piolib_mod::seterrorhandlingfile (file, method, oldmethod)
     set the pio error handling method for a file  More...
     
    subroutine piolib_mod::seterrorhandlingiosystem (iosystem, method, oldmethod)
     set the pio error handling method for a pio system  More...
     
    subroutine piolib_mod::seterrorhandlingiosysid (iosysid, method, oldmethod)
     set the pio error handling method for a pio system or globally  More...
     
    subroutine piolib_mod::pio_initdecomp_bc (iosystem, basepiotype, dims, compstart, compcount, iodesc)
     Implements the decomp_bc for PIO_initdecomp.  More...
     
    subroutine piolib_mod::initdecomp_2dof_bin_i4 (iosystem, basepiotype, dims, lenblocks, compdof, iodofr, iodofw, iodesc)
     A deprecated interface to the PIO_initdecomp method.  More...
     
    subroutine piolib_mod::initdecomp_1dof_bin_i8 (iosystem, basepiotype, dims, lenblocks, compdof, iodofr, iodesc)
     A deprecated interface to the PIO_initdecomp method.  More...
     
    subroutine piolib_mod::initdecomp_2dof_nf_i4 (iosystem, basepiotype, dims, lenblocks, compdof, iodofr, iodofw, start, count, iodesc)
     A deprecated interface to the PIO_initdecomp method.  More...
     
    subroutine piolib_mod::initdecomp_1dof_nf_i4 (iosystem, basepiotype, dims, lenblocks, compdof, iodof, start, count, iodesc)
     A deprecated interface to the PIO_initdecomp method.  More...
     
    subroutine piolib_mod::pio_initdecomp_dof_i4 (iosystem, basepiotype, dims, compdof, iodesc, rearr, iostart, iocount)
     Implements the decomp_dof for PIO_initdecomp (previous name: initdecomp_1dof_nf_box)  More...
     
    
+subroutine piolib_mod::pio_initdecomp_dof_i8 (iosystem, basepiotype, dims, compdof, iodesc, rearr, iostart, iocount)
     
    subroutine piolib_mod::init_intracom (comp_rank, comp_comm, num_iotasks, num_aggregator, stride, rearr, iosystem, base, rearr_opts)
     initialize the pio subsystem.  More...
     
    subroutine piolib_mod::init_intercom (component_count, peer_comm, comp_comms, io_comm, iosystem)
     Initialize the pio subsystem.  More...
     
    
+subroutine, public piolib_mod::pio_set_hint (iosystem, hint, hintval)
     
    subroutine piolib_mod::finalize (iosystem, ierr)
     finalizes the pio subsystem.  More...
     
    subroutine piolib_mod::getnumiotasks (iosystem, numiotasks)
     This returns the number of IO-tasks that PIO is using.  More...
     
    
+logical function, public piolib_mod::pio_iotype_available (iotype)
     
    integer function piolib_mod::createfile (iosystem, file, iotype, fname, amode_in)
     Create a NetCDF or PNetCDF file using PIO.  More...
     
    integer function, public piolib_mod::pio_openfile (iosystem, file, iotype, fname, mode)
     open an existing file using pio  More...
     
    subroutine piolib_mod::syncfile (file)
     synchronizing a file forces all writes to complete before the subroutine returns.  More...
     
    subroutine piolib_mod::freedecomp_ios (ios, iodesc)
     free all allocated storage associated with this decomposition  More...
     
    subroutine piolib_mod::freedecomp_file (file, iodesc)
     free all allocated storage associated with this decomposition  More...
     
    subroutine piolib_mod::closefile (file)
     close a disk file  More...
     
    
+subroutine piolib_mod::read_ascii (rank, iobuf, size)
     
    subroutine, public piolib_mod::pio_deletefile (ios, fname)
     Delete a file.  More...
     
    integer function, public piolib_mod::pio_set_rearr_opts (ios, comm_type, fcd, enable_hs_c2i, enable_isend_c2i, max_pend_req_c2i, enable_hs_i2c, enable_isend_i2c, max_pend_req_i2c)
     Set the rerranger options.  More...
     
    
+
    Detailed Description
    
+
    Initialization Routines for PIO. 
    
+
    Function/Subroutine Documentation
    
+
+
    ◆ pio_deletefile()
    
+
+
    
+
    
+      
+        
+          
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    subroutine, public piolib_mod::pio_deletefile (type(iosystem_desc_t) ios, 
    character(len=*) fname 
    )
    
+
    
+
+
    Delete a file. 
    
+
    Parameters
    
+  
+    
+    
+  
    ios: a pio system handle 
    fname: a filename 
    
+  
    
+
    
+
+
    
+
    
+
+
    ◆ pio_file_is_open()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+          
+        
+      
    logical function, public piolib_mod::pio_file_is_open (type(file_desc_t), intent(in) File)
    
+
    
+
+
    This logical function indicates if a file is open. 
    
+
    Parameters
    
+  
+    
+  
    FileFile descriptor structure. This structure holds information associated with each open file 
    
+  
    
+
    
+
+
    
+
    
+
+
    ◆ pio_set_rearr_opts()
    
+
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+
    
+      
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+      
    integer function, public piolib_mod::pio_set_rearr_opts (type(iosystem_desc_t), intent(inout) ios, 
    integer, intent(in) comm_type, 
    integer, intent(in) fcd, 
    logical, intent(in) enable_hs_c2i, 
    logical, intent(in) enable_isend_c2i, 
    integer, intent(in) max_pend_req_c2i, 
    logical, intent(in) enable_hs_i2c, 
    logical, intent(in) enable_isend_i2c, 
    integer, intent(in) max_pend_req_i2c 
    )
    
+
    
+
+
    Set the rerranger options. 
    
+
    Parameters
    
+  
+    
+    
+    
+    
+    
+    
+    
+    
+    
+  
    ios: handle to pio iosystem 
    comm_type: The two choices for rearranger communication.
      
+
    • PIO_rearr_comm_p2p : Point to point
      • 
+
    • PIO_rearr_comm_coll : Collective 
      • 
+
    
+
    fcd: The four choices for rearranger communication direction.
      
+
    • PIO_rearr_comm_fc_2d_enable : COMM procs to IO procs and vice versa
      • 
+
    • PIO_rearr_comm_fc_1d_comp2io: COMM procs to IO procs only
      • 
+
    • PIO_rearr_comm_fc_1d_io2comp: IO procs to COMM procs only
      • 
+
    • PIO_rearr_comm_fc_2d_disable: Disable flow control 
      • 
+
    
+
    enable_hs_c2i: Enable handshake (compute procs to io procs) 
    enable_isend_c2i: Enable isends (compute procs to io procs) 
    max_pend_req_c2iMaximum pending requests (compute procs to io procs) 
    enable_hs_i2c: Enable handshake (io procs to compute procs) 
    enable_isend_i2c: Enable isends (io procs to compute procs) 
    max_pend_req_i2cMaximum pending requests (io procs to compute procs) Type that defines the PIO rearranger options.
      
+
    • enable_hs : Enable handshake (true/false)
      • 
+
    • enable_isend : Enable Isends (true/false)
      • 
+
    • max_pend_req : Maximum pending requests (To indicated unlimited number of requests use PIO_REARR_COMM_UNLIMITED_PEND_REQ) 
      • 
+
    
+
    
+  
    
+
    
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+
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pionfatt__mod_8_f90.html b/docs/pionfatt__mod_8_f90.html
new file mode 100644
index 00000000000..0148ca33dff
--- /dev/null
+++ b/docs/pionfatt__mod_8_f90.html
@@ -0,0 +1,262 @@
+
+
+
+
+
+
+
+PIO: pionfatt_mod.F90 File Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
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+
    
+
+
    
+
+
+
    
+
    
+  
    
+Data Types |
+Macros |
+Functions/Subroutines  
    
+  
    
+
    pionfatt_mod.F90 File Reference
      
    
+
    
+
    
+
+
    NetCDF attribute interface to PIO.  
+More...
    
+
+
+
+
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+
    
+Data Types
    interface  pionfatt_mod::PIOc_put_att_text
     Write a netCDF text attribute.  More...
     
    interface  pionfatt_mod::PIOc_get_att_text
     
    interface  pionfatt_mod::PIOc_put_att_int
     
    interface  pionfatt_mod::PIOc_put_att_float
     
    interface  pionfatt_mod::PIOc_put_att_double
     
    interface  pionfatt_mod::PIOc_get_att_int
     
    interface  pionfatt_mod::PIOc_get_att_float
     
    interface  pionfatt_mod::PIOc_get_att_double
     
    
+
+
+
+
    
+Macros
    
+#define __PIO_FILE__   "pionfatt_mod.F90"
     
    
+
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+Functions/Subroutines
    integer function pionfatt_mod::put_att_desc_text (File, vdesc, name, values)
     Writes an netcdf attribute to a file.  More...
     
    
+integer function pionfatt_mod::put_att_desc_real (File, vdesc, name, values)
     
    
+integer function pionfatt_mod::put_att_desc_double (File, vdesc, name, values)
     
    
+integer function pionfatt_mod::put_att_desc_int (File, vdesc, name, values)
     
    
+integer function pionfatt_mod::put_att_vid_text (File, varid, name, value)
     
    
+integer function pionfatt_mod::put_att_vid_real (File, varid, name, value)
     
    
+integer function pionfatt_mod::put_att_vid_double (File, varid, name, value)
     
    
+integer function pionfatt_mod::put_att_vid_int (File, varid, name, value)
     
    
+integer function pionfatt_mod::put_att_id_int (ncid, varid, name, values)
     
    
+integer function pionfatt_mod::put_att_id_real (ncid, varid, name, values)
     
    
+integer function pionfatt_mod::put_att_id_double (ncid, varid, name, values)
     
    
+integer function pionfatt_mod::put_att_id_text (ncid, varid, name, values)
     
    
+integer function pionfatt_mod::put_att_1d_id_text (ncid, varid, name, value)
     
    
+integer function pionfatt_mod::put_att_1d_id_text_internal (ncid, varid, name, arrlen, values)
     
    
+integer function pionfatt_mod::get_att_id_text (ncid, varid, name, values)
     
    integer function pionfatt_mod::put_att_1d_id_real (ncid, varid, name, values)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfatt_mod::put_att_1d_id_double (ncid, varid, name, values)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfatt_mod::put_att_1d_id_int (ncid, varid, name, values)
     Writes an netcdf attribute to a file.  More...
     
    
+integer function pionfatt_mod::put_att_1d_id_internal_real (ncid, varid, name, len, values)
     
    
+integer function pionfatt_mod::put_att_1d_id_internal_double (ncid, varid, name, len, values)
     
    
+integer function pionfatt_mod::put_att_1d_id_internal_int (ncid, varid, name, len, values)
     
    integer function pionfatt_mod::put_att_1d_desc_real (File, varDesc, name, values)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfatt_mod::put_att_1d_desc_int (File, varDesc, name, values)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfatt_mod::put_att_1d_desc_double (File, varDesc, name, values)
     Writes an netcdf attribute to a file.  More...
     
    
+integer function pionfatt_mod::put_att_1d_vid_text (File, varid, name, value)
     
    
+integer function pionfatt_mod::put_att_1d_vid_real (File, varid, name, value)
     
    
+integer function pionfatt_mod::put_att_1d_vid_double (File, varid, name, value)
     
    
+integer function pionfatt_mod::put_att_1d_vid_int (File, varid, name, value)
     
    integer function pionfatt_mod::get_att_desc_text (File, varDesc, name, values)
     Reads an netcdf attribute from a file.  More...
     
    
+integer function pionfatt_mod::get_att_desc_real (File, varDesc, name, values)
     
    
+integer function pionfatt_mod::get_att_desc_double (File, varDesc, name, values)
     
    
+integer function pionfatt_mod::get_att_desc_int (File, varDesc, name, values)
     
    integer function pionfatt_mod::get_att_desc_1d_int (File, varDesc, name, values)
     Reads an netcdf attribute from a file.  More...
     
    
+integer function pionfatt_mod::get_att_desc_1d_real (File, varDesc, name, values)
     
    
+integer function pionfatt_mod::get_att_desc_1d_double (File, varDesc, name, values)
     
    integer function pionfatt_mod::get_att_id_int (ncid, varid, name, values)
     Reads an netcdf attribute from a file.  More...
     
    
+integer function pionfatt_mod::get_att_id_real (ncid, varid, name, values)
     
    
+integer function pionfatt_mod::get_att_id_double (ncid, varid, name, values)
     
    
+integer function pionfatt_mod::get_att_text (File, varid, name, values)
     
    
+integer function pionfatt_mod::get_att_real (File, varid, name, values)
     
    
+integer function pionfatt_mod::get_att_double (File, varid, name, values)
     
    
+integer function pionfatt_mod::get_att_int (File, varid, name, values)
     
    integer function pionfatt_mod::get_att_1d_real (File, varid, name, values)
     Reads an netcdf attribute from a file.  More...
     
    integer function pionfatt_mod::get_att_1d_int (File, varid, name, values)
     Reads an netcdf attribute from a file.  More...
     
    integer function pionfatt_mod::get_att_1d_double (File, varid, name, values)
     Reads an netcdf attribute from a file.  More...
     
    
+integer function pionfatt_mod::get_att_1d_id_real (ncid, varid, name, values)
     
    
+integer function pionfatt_mod::get_att_1d_id_int (ncid, varid, name, values)
     
    
+integer function pionfatt_mod::get_att_1d_id_double (ncid, varid, name, values)
     
    
+
    Detailed Description
    
+
    NetCDF attribute interface to PIO. 
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pionfget__mod_8_f90.html b/docs/pionfget__mod_8_f90.html
new file mode 100644
index 00000000000..f36d4ba9629
--- /dev/null
+++ b/docs/pionfget__mod_8_f90.html
@@ -0,0 +1,262 @@
+
+
+
+
+
+
+
+PIO: pionfget_mod.F90 File Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+Data Types |
+Macros |
+Functions/Subroutines  
    
+  
    
+
    pionfget_mod.F90 File Reference
      
    
+
    
+
    
+
+
    Read Routines for non-decomposed NetCDF data.  
+More...
    
+
+
+
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+
    
+Data Types
    interface  pionfget_mod::PIOc_get_var_int
     
    interface  pionfget_mod::PIOc_get_var_float
     
    interface  pionfget_mod::PIOc_get_var_double
     
    interface  pionfget_mod::PIOc_get_vara_int
     
    interface  pionfget_mod::PIOc_get_vara_float
     
    interface  pionfget_mod::PIOc_get_vara_double
     
    interface  pionfget_mod::PIOc_get_vara_text
     
    
+
+
+
+
    
+Macros
    
+#define __PIO_FILE__   "pionfget_mod.F90"
     
    
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+Functions/Subroutines
    integer function pionfget_mod::get_var1_text (File, varid, index, ival)
     Reads non-decomposed fields from a NetCDF file.  More...
     
    
+integer function pionfget_mod::get_var1_id_real (ncid, varid, index, ival)
     
    
+integer function pionfget_mod::get_var1_id_double (ncid, varid, index, ival)
     
    
+integer function pionfget_mod::get_var1_id_text_internal (ncid, varid, index, vlen, ival)
     
    integer function pionfget_mod::get_var1_vdesc_text (File, vardesc, index, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_1d_int (File, varid, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_2d_int (File, varid, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_3d_int (File, varid, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_4d_int (File, varid, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_5d_int (File, varid, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_1d_real (File, varid, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_2d_real (File, varid, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_3d_real (File, varid, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_4d_real (File, varid, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_5d_real (File, varid, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_1d_double (File, varid, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_2d_double (File, varid, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_3d_double (File, varid, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_4d_double (File, varid, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_5d_double (File, varid, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_1d_text (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_2d_text (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_3d_text (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_4d_text (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_5d_text (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_1d_real (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_2d_real (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_3d_real (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_4d_real (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_5d_real (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_1d_double (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_2d_double (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_3d_double (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_4d_double (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_5d_double (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_1d_int (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_2d_int (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_3d_int (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_4d_int (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_vara_vdesc_5d_int (File, vardesc, start, count, ival)
     Writes an netcdf attribute to a file.  More...
     
    integer function pionfget_mod::get_var_0d_text (File, varid, ival)
     Writes an netcdf attribute to a file.  More...
     
    
+integer function pionfget_mod::get_var_0d_real (File, varid, ival)
     
    
+integer function pionfget_mod::get_var_0d_double (File, varid, ival)
     
    
+integer function pionfget_mod::get_var_1d_text (File, varid, ival)
     
    
+integer function pionfget_mod::get_vara_real_internal (ncid, varid, start, count, ival)
     
    
+integer function pionfget_mod::get_vara_double_internal (ncid, varid, start, count, ival)
     
    
+integer function pionfget_mod::get_vara_text_internal (ncid, varid, start, count, nstrs, ival)
     
    
+integer function pionfget_mod::get_var_1d_int (File, varid, ival)
     
    integer function pionfget_mod::get_var_vdesc_0d_text (File, vardesc, ival)
     Writes an netcdf attribute to a file.  More...
     
    
+
    Detailed Description
    
+
    Read Routines for non-decomposed NetCDF data. 
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/pionfput__mod_8_f90.html b/docs/pionfput__mod_8_f90.html
new file mode 100644
index 00000000000..0f114c568be
--- /dev/null
+++ b/docs/pionfput__mod_8_f90.html
@@ -0,0 +1,397 @@
+
+
+
+
+
+
+
+PIO: pionfput_mod.F90 File Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+Data Types |
+Macros |
+Functions/Subroutines  
    
+  
    
+
    pionfput_mod.F90 File Reference
      
    
+
    
+
    
+
+
    Write routines for non-decomposed NetCDF data.  
+More...
    
+
+
+
+
+
+
+
+
+
+
+
    
+Data Types
    interface  pionfput_mod::PIOc_put_vara_text
     
    interface  pionfput_mod::PIOc_put_vara_int
     
    interface  pionfput_mod::PIOc_put_vara_float
     
    interface  pionfput_mod::PIOc_put_vara_double
     
    
+
+
+
+
    
+Macros
    
+#define __PIO_FILE__   "pionfput_mod.F90"
     
    
+
+
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+
    
+Functions/Subroutines
    integer function pionfput_mod::put_var1_text (File, varid, index, ival)
     Write one element of data to a netCDF variable.  More...
     
    integer function pionfput_mod::put_var1_int (File, varid, index, ival)
     Write one element of data to a netCDF variable.  More...
     
    integer function pionfput_mod::put_var1_real (File, varid, index, ival)
     Write one element of data to a netCDF variable.  More...
     
    integer function pionfput_mod::put_var1_double (File, varid, index, ival)
     Write one element of data to a netCDF variable.  More...
     
    integer function pionfput_mod::put_var1_vdesc_text (File, vardesc, index, ival)
     Write one element of data to a netCDF variable.  More...
     
    integer function pionfput_mod::put_var_0d_text (File, varid, ival)
     Writes a netCDF scalar variable.  More...
     
    integer function pionfput_mod::put_var_1d_text (File, varid, ival)
     Writes text data to netcdf variable.  More...
     
    integer function pionfput_mod::put_var_2d_text (File, varid, ival)
     Writes text data to netcdf variable.  More...
     
    integer function pionfput_mod::put_var_3d_text (File, varid, ival)
     Writes text data to netcdf variable.  More...
     
    integer function pionfput_mod::put_var_4d_text (File, varid, ival)
     Writes text data to netcdf variable.  More...
     
    integer function pionfput_mod::put_var_5d_text (File, varid, ival)
     Writes text data to netcdf variable.  More...
     
    integer function pionfput_mod::put_var_internal_int (ncid, varid, ival)
     Writes int data to a netCDF variable.  More...
     
    integer function pionfput_mod::put_var_internal_real (ncid, varid, ival)
     Writes real data to a netCDF variable.  More...
     
    integer function pionfput_mod::put_var_internal_double (ncid, varid, ival)
     Writes double data to a netCDF variable.  More...
     
    integer function pionfput_mod::put_var_1d_int (File, varid, ival)
     Write int data to a netCDF varaible of 1 dimension(s).  More...
     
    integer function pionfput_mod::put_var_2d_int (File, varid, ival)
     Write int data to a netCDF varaible of 2 dimension(s).  More...
     
    integer function pionfput_mod::put_var_3d_int (File, varid, ival)
     Write int data to a netCDF varaible of 3 dimension(s).  More...
     
    integer function pionfput_mod::put_var_4d_int (File, varid, ival)
     Write int data to a netCDF varaible of 4 dimension(s).  More...
     
    integer function pionfput_mod::put_var_5d_int (File, varid, ival)
     Write int data to a netCDF varaible of 5 dimension(s).  More...
     
    integer function pionfput_mod::put_var_1d_real (File, varid, ival)
     Write real data to a netCDF varaible of 1 dimension(s).  More...
     
    integer function pionfput_mod::put_var_2d_real (File, varid, ival)
     Write real data to a netCDF varaible of 2 dimension(s).  More...
     
    integer function pionfput_mod::put_var_3d_real (File, varid, ival)
     Write real data to a netCDF varaible of 3 dimension(s).  More...
     
    integer function pionfput_mod::put_var_4d_real (File, varid, ival)
     Write real data to a netCDF varaible of 4 dimension(s).  More...
     
    integer function pionfput_mod::put_var_5d_real (File, varid, ival)
     Write real data to a netCDF varaible of 5 dimension(s).  More...
     
    integer function pionfput_mod::put_var_1d_double (File, varid, ival)
     Write double data to a netCDF varaible of 1 dimension(s).  More...
     
    integer function pionfput_mod::put_var_2d_double (File, varid, ival)
     Write double data to a netCDF varaible of 2 dimension(s).  More...
     
    integer function pionfput_mod::put_var_3d_double (File, varid, ival)
     Write double data to a netCDF varaible of 3 dimension(s).  More...
     
    integer function pionfput_mod::put_var_4d_double (File, varid, ival)
     Write double data to a netCDF varaible of 4 dimension(s).  More...
     
    integer function pionfput_mod::put_var_5d_double (File, varid, ival)
     Write double data to a netCDF varaible of 5 dimension(s).  More...
     
    integer function pionfput_mod::put_var_0d_int (File, varid, ival)
     Writes int data to a netCDF scalar variable.  More...
     
    integer function pionfput_mod::put_var_0d_real (File, varid, ival)
     Writes real data to a netCDF scalar variable.  More...
     
    integer function pionfput_mod::put_var_0d_double (File, varid, ival)
     Writes double data to a netCDF scalar variable.  More...
     
    integer function pionfput_mod::put_var_vdesc_0d_text (File, vardesc, ival)
     Write text data to a netcdf variable of 0 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_1d_text (File, vardesc, ival)
     Write text data to a netcdf variable of 1 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_2d_text (File, vardesc, ival)
     Write text data to a netcdf variable of 2 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_3d_text (File, vardesc, ival)
     Write text data to a netcdf variable of 3 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_4d_text (File, vardesc, ival)
     Write text data to a netcdf variable of 4 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_5d_text (File, vardesc, ival)
     Write text data to a netcdf variable of 5 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_0d_real (File, vardesc, ival)
     Write real data to a netcdf variable of 0 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_1d_real (File, vardesc, ival)
     Write real data to a netcdf variable of 1 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_2d_real (File, vardesc, ival)
     Write real data to a netcdf variable of 2 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_3d_real (File, vardesc, ival)
     Write real data to a netcdf variable of 3 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_4d_real (File, vardesc, ival)
     Write real data to a netcdf variable of 4 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_5d_real (File, vardesc, ival)
     Write real data to a netcdf variable of 5 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_0d_double (File, vardesc, ival)
     Write double data to a netcdf variable of 0 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_1d_double (File, vardesc, ival)
     Write double data to a netcdf variable of 1 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_2d_double (File, vardesc, ival)
     Write double data to a netcdf variable of 2 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_3d_double (File, vardesc, ival)
     Write double data to a netcdf variable of 3 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_4d_double (File, vardesc, ival)
     Write double data to a netcdf variable of 4 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_5d_double (File, vardesc, ival)
     Write double data to a netcdf variable of 5 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_0d_int (File, vardesc, ival)
     Write int data to a netcdf variable of 0 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_1d_int (File, vardesc, ival)
     Write int data to a netcdf variable of 1 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_2d_int (File, vardesc, ival)
     Write int data to a netcdf variable of 2 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_3d_int (File, vardesc, ival)
     Write int data to a netcdf variable of 3 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_4d_int (File, vardesc, ival)
     Write int data to a netcdf variable of 4 dimension(s).  More...
     
    integer function pionfput_mod::put_var_vdesc_5d_int (File, vardesc, ival)
     Write int data to a netcdf variable of 5 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_1d_text (File, varid, start, count, ival)
     Write text data to a netcdf variable of 1 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_2d_text (File, varid, start, count, ival)
     Write text data to a netcdf variable of 2 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_3d_text (File, varid, start, count, ival)
     Write text data to a netcdf variable of 3 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_4d_text (File, varid, start, count, ival)
     Write text data to a netcdf variable of 4 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_5d_text (File, varid, start, count, ival)
     Write text data to a netcdf variable of 5 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_1d_int (File, varid, start, count, ival)
     Write int data to a netcdf variable of 1 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_2d_int (File, varid, start, count, ival)
     Write int data to a netcdf variable of 2 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_3d_int (File, varid, start, count, ival)
     Write int data to a netcdf variable of 3 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_4d_int (File, varid, start, count, ival)
     Write int data to a netcdf variable of 4 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_5d_int (File, varid, start, count, ival)
     Write int data to a netcdf variable of 5 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_1d_real (File, varid, start, count, ival)
     Write real data to a netcdf variable of 1 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_2d_real (File, varid, start, count, ival)
     Write real data to a netcdf variable of 2 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_3d_real (File, varid, start, count, ival)
     Write real data to a netcdf variable of 3 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_4d_real (File, varid, start, count, ival)
     Write real data to a netcdf variable of 4 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_5d_real (File, varid, start, count, ival)
     Write real data to a netcdf variable of 5 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_1d_double (File, varid, start, count, ival)
     Write double data to a netcdf variable of 1 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_2d_double (File, varid, start, count, ival)
     Write double data to a netcdf variable of 2 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_3d_double (File, varid, start, count, ival)
     Write double data to a netcdf variable of 3 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_4d_double (File, varid, start, count, ival)
     Write double data to a netcdf variable of 4 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_5d_double (File, varid, start, count, ival)
     Write double data to a netcdf variable of 5 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_1d_text (File, vardesc, start, count, ival)
     Write text data to a netcdf variable of 1 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_2d_text (File, vardesc, start, count, ival)
     Write text data to a netcdf variable of 2 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_3d_text (File, vardesc, start, count, ival)
     Write text data to a netcdf variable of 3 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_4d_text (File, vardesc, start, count, ival)
     Write text data to a netcdf variable of 4 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_5d_text (File, vardesc, start, count, ival)
     Write text data to a netcdf variable of 5 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_1d_real (File, vardesc, start, count, ival)
     Write real data to a netcdf variable of 1 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_2d_real (File, vardesc, start, count, ival)
     Write real data to a netcdf variable of 2 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_3d_real (File, vardesc, start, count, ival)
     Write real data to a netcdf variable of 3 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_4d_real (File, vardesc, start, count, ival)
     Write real data to a netcdf variable of 4 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_5d_real (File, vardesc, start, count, ival)
     Write real data to a netcdf variable of 5 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_1d_double (File, vardesc, start, count, ival)
     Write double data to a netcdf variable of 1 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_2d_double (File, vardesc, start, count, ival)
     Write double data to a netcdf variable of 2 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_3d_double (File, vardesc, start, count, ival)
     Write double data to a netcdf variable of 3 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_4d_double (File, vardesc, start, count, ival)
     Write double data to a netcdf variable of 4 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_5d_double (File, vardesc, start, count, ival)
     Write double data to a netcdf variable of 5 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_1d_int (File, vardesc, start, count, ival)
     Write int data to a netcdf variable of 1 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_2d_int (File, vardesc, start, count, ival)
     Write int data to a netcdf variable of 2 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_3d_int (File, vardesc, start, count, ival)
     Write int data to a netcdf variable of 3 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_4d_int (File, vardesc, start, count, ival)
     Write int data to a netcdf variable of 4 dimension(s).  More...
     
    integer function pionfput_mod::put_vara_vdesc_5d_int (File, vardesc, start, count, ival)
     Write int data to a netcdf variable of 5 dimension(s).  More...
     
    
+
    Detailed Description
    
+
    Write routines for non-decomposed NetCDF data. 
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
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+++ b/docs/search/all_0.html
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diff --git a/docs/search/all_0.js b/docs/search/all_0.js
new file mode 100644
index 00000000000..55306942dd1
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+++ b/docs/search/all_0.js
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@@ -0,0 +1,5 @@
+var searchData=
+[
+  ['error_20handling',['Error Handling',['../error.html',1,'']]],
+  ['examples',['Examples',['../examp.html',1,'']]]
+];
diff --git a/docs/search/pages_3.html b/docs/search/pages_3.html
new file mode 100644
index 00000000000..bc0e37f20b1
--- /dev/null
+++ b/docs/search/pages_3.html
@@ -0,0 +1,26 @@
+
+
+
+
+
+
+
+
+
+
    
+
    Loading...
    
+
    
+
+
    Searching...
    
+
    No Matches
    
+
+
    
+
+
diff --git a/docs/search/pages_3.js b/docs/search/pages_3.js
new file mode 100644
index 00000000000..e1b87fcd590
--- /dev/null
+++ b/docs/search/pages_3.js
@@ -0,0 +1,4 @@
+var searchData=
+[
+  ['frequently_20asked_20questions',['Frequently Asked Questions',['../faq.html',1,'']]]
+];
diff --git a/docs/search/pages_4.html b/docs/search/pages_4.html
new file mode 100644
index 00000000000..d4c3e8e9f65
--- /dev/null
+++ b/docs/search/pages_4.html
@@ -0,0 +1,26 @@
+
+
+
+
+
+
+
+
+
+
    
+
    Loading...
    
+
    
+
+
    Searching...
    
+
    No Matches
    
+
+
    
+
+
diff --git a/docs/search/pages_4.js b/docs/search/pages_4.js
new file mode 100644
index 00000000000..b509fa39fea
--- /dev/null
+++ b/docs/search/pages_4.js
@@ -0,0 +1,4 @@
+var searchData=
+[
+  ['guide_20for_20contributors',['Guide for Contributors',['../contributing_code.html',1,'']]]
+];
diff --git a/docs/search/pages_5.html b/docs/search/pages_5.html
new file mode 100644
index 00000000000..af17efeb8e9
--- /dev/null
+++ b/docs/search/pages_5.html
@@ -0,0 +1,26 @@
+
+
+
+
+
+
+
+
+
+
    
+
    Loading...
    
+
    
+
+
    Searching...
    
+
    No Matches
    
+
+
    
+
+
diff --git a/docs/search/pages_5.js b/docs/search/pages_5.js
new file mode 100644
index 00000000000..dbf021664df
--- /dev/null
+++ b/docs/search/pages_5.js
@@ -0,0 +1,6 @@
+var searchData=
+[
+  ['installing_20pio',['Installing PIO',['../install.html',1,'']]],
+  ['introduction',['Introduction',['../intro.html',1,'']]],
+  ['install_20walk_2dthrough',['Install Walk-through',['../mach_walkthrough.html',1,'']]]
+];
diff --git a/docs/search/pages_6.html b/docs/search/pages_6.html
new file mode 100644
index 00000000000..52583b33e81
--- /dev/null
+++ b/docs/search/pages_6.html
@@ -0,0 +1,26 @@
+
+
+
+
+
+
+
+
+
+
    
+
    Loading...
    
+
    
+
+
    Searching...
    
+
    No Matches
    
+
+
    
+
+
diff --git a/docs/search/pages_6.js b/docs/search/pages_6.js
new file mode 100644
index 00000000000..8ecf204f25f
--- /dev/null
+++ b/docs/search/pages_6.js
@@ -0,0 +1,5 @@
+var searchData=
+[
+  ['pio_20user_20interface',['PIO user interface',['../api.html',1,'']]],
+  ['parallel_20i_2fo_20library_20_28pio_29',['Parallel I/O library (PIO)',['../index.html',1,'']]]
+];
diff --git a/docs/search/pages_7.html b/docs/search/pages_7.html
new file mode 100644
index 00000000000..7d4b8fe9bd0
--- /dev/null
+++ b/docs/search/pages_7.html
@@ -0,0 +1,26 @@
+
+
+
+
+
+
+
+
+
+
    
+
    Loading...
    
+
    
+
+
    Searching...
    
+
    No Matches
    
+
+
    
+
+
diff --git a/docs/search/pages_7.js b/docs/search/pages_7.js
new file mode 100644
index 00000000000..2795e1ecb35
--- /dev/null
+++ b/docs/search/pages_7.js
@@ -0,0 +1,5 @@
+var searchData=
+[
+  ['testing',['Testing',['../test.html',1,'']]],
+  ['testpio_3a_20a_20regression_20and_20benchmarking_20code',['testpio: a regression and benchmarking code',['../testpio_example.html',1,'examp']]]
+];
diff --git a/docs/search/search.css b/docs/search/search.css
new file mode 100644
index 00000000000..3cf9df94a41
--- /dev/null
+++ b/docs/search/search.css
@@ -0,0 +1,271 @@
+/*---------------- Search Box */
+
+#FSearchBox {
+    float: left;
+}
+
+#MSearchBox {
+    white-space : nowrap;
+    float: none;
+    margin-top: 8px;
+    right: 0px;
+    width: 170px;
+    height: 24px;
+    z-index: 102;
+}
+
+#MSearchBox .left
+{
+    display:block;
+    position:absolute;
+    left:10px;
+    width:20px;
+    height:19px;
+    background:url('search_l.png') no-repeat;
+    background-position:right;
+}
+
+#MSearchSelect {
+    display:block;
+    position:absolute;
+    width:20px;
+    height:19px;
+}
+
+.left #MSearchSelect {
+    left:4px;
+}
+
+.right #MSearchSelect {
+    right:5px;
+}
+
+#MSearchField {
+    display:block;
+    position:absolute;
+    height:19px;
+    background:url('search_m.png') repeat-x;
+    border:none;
+    width:115px;
+    margin-left:20px;
+    padding-left:4px;
+    color: #909090;
+    outline: none;
+    font: 9pt Arial, Verdana, sans-serif;
+    -webkit-border-radius: 0px;
+}
+
+#FSearchBox #MSearchField {
+    margin-left:15px;
+}
+
+#MSearchBox .right {
+    display:block;
+    position:absolute;
+    right:10px;
+    top:8px;
+    width:20px;
+    height:19px;
+    background:url('search_r.png') no-repeat;
+    background-position:left;
+}
+
+#MSearchClose {
+    display: none;
+    position: absolute;
+    top: 4px;
+    background : none;
+    border: none;
+    margin: 0px 4px 0px 0px;
+    padding: 0px 0px;
+    outline: none;
+}
+
+.left #MSearchClose {
+    left: 6px;
+}
+
+.right #MSearchClose {
+    right: 2px;
+}
+
+.MSearchBoxActive #MSearchField {
+    color: #000000;
+}
+
+/*---------------- Search filter selection */
+
+#MSearchSelectWindow {
+    display: none;
+    position: absolute;
+    left: 0; top: 0;
+    border: 1px solid #90A5CE;
+    background-color: #F9FAFC;
+    z-index: 10001;
+    padding-top: 4px;
+    padding-bottom: 4px;
+    -moz-border-radius: 4px;
+    -webkit-border-top-left-radius: 4px;
+    -webkit-border-top-right-radius: 4px;
+    -webkit-border-bottom-left-radius: 4px;
+    -webkit-border-bottom-right-radius: 4px;
+    -webkit-box-shadow: 5px 5px 5px rgba(0, 0, 0, 0.15);
+}
+
+.SelectItem {
+    font: 8pt Arial, Verdana, sans-serif;
+    padding-left:  2px;
+    padding-right: 12px;
+    border: 0px;
+}
+
+span.SelectionMark {
+    margin-right: 4px;
+    font-family: monospace;
+    outline-style: none;
+    text-decoration: none;
+}
+
+a.SelectItem {
+    display: block;
+    outline-style: none;
+    color: #000000; 
+    text-decoration: none;
+    padding-left:   6px;
+    padding-right: 12px;
+}
+
+a.SelectItem:focus,
+a.SelectItem:active {
+    color: #000000; 
+    outline-style: none;
+    text-decoration: none;
+}
+
+a.SelectItem:hover {
+    color: #FFFFFF;
+    background-color: #3D578C;
+    outline-style: none;
+    text-decoration: none;
+    cursor: pointer;
+    display: block;
+}
+
+/*---------------- Search results window */
+
+iframe#MSearchResults {
+    width: 60ex;
+    height: 15em;
+}
+
+#MSearchResultsWindow {
+    display: none;
+    position: absolute;
+    left: 0; top: 0;
+    border: 1px solid #000;
+    background-color: #EEF1F7;
+    z-index:10000;
+}
+
+/* ----------------------------------- */
+
+
+#SRIndex {
+    clear:both; 
+    padding-bottom: 15px;
+}
+
+.SREntry {
+    font-size: 10pt;
+    padding-left: 1ex;
+}
+
+.SRPage .SREntry {
+    font-size: 8pt;
+    padding: 1px 5px;
+}
+
+body.SRPage {
+    margin: 5px 2px;
+}
+
+.SRChildren {
+    padding-left: 3ex; padding-bottom: .5em 
+}
+
+.SRPage .SRChildren {
+    display: none;
+}
+
+.SRSymbol {
+    font-weight: bold; 
+    color: #425E97;
+    font-family: Arial, Verdana, sans-serif;
+    text-decoration: none;
+    outline: none;
+}
+
+a.SRScope {
+    display: block;
+    color: #425E97; 
+    font-family: Arial, Verdana, sans-serif;
+    text-decoration: none;
+    outline: none;
+}
+
+a.SRSymbol:focus, a.SRSymbol:active,
+a.SRScope:focus, a.SRScope:active {
+    text-decoration: underline;
+}
+
+span.SRScope {
+    padding-left: 4px;
+}
+
+.SRPage .SRStatus {
+    padding: 2px 5px;
+    font-size: 8pt;
+    font-style: italic;
+}
+
+.SRResult {
+    display: none;
+}
+
+DIV.searchresults {
+    margin-left: 10px;
+    margin-right: 10px;
+}
+
+/*---------------- External search page results */
+
+.searchresult {
+    background-color: #F0F3F8;
+}
+
+.pages b {
+   color: white;
+   padding: 5px 5px 3px 5px;
+   background-image: url("../tab_a.png");
+   background-repeat: repeat-x;
+   text-shadow: 0 1px 1px #000000;
+}
+
+.pages {
+    line-height: 17px;
+    margin-left: 4px;
+    text-decoration: none;
+}
+
+.hl {
+    font-weight: bold;
+}
+
+#searchresults {
+    margin-bottom: 20px;
+}
+
+.searchpages {
+    margin-top: 10px;
+}
+
diff --git a/docs/search/search.js b/docs/search/search.js
new file mode 100644
index 00000000000..dedce3bf093
--- /dev/null
+++ b/docs/search/search.js
@@ -0,0 +1,791 @@
+function convertToId(search)
+{
+  var result = '';
+  for (i=0;i do a search
+    {
+      this.Search();
+    }
+  }
+
+  this.OnSearchSelectKey = function(evt)
+  {
+    var e = (evt) ? evt : window.event; // for IE
+    if (e.keyCode==40 && this.searchIndex0) // Up
+    {
+      this.searchIndex--;
+      this.OnSelectItem(this.searchIndex);
+    }
+    else if (e.keyCode==13 || e.keyCode==27)
+    {
+      this.OnSelectItem(this.searchIndex);
+      this.CloseSelectionWindow();
+      this.DOMSearchField().focus();
+    }
+    return false;
+  }
+
+  // --------- Actions
+
+  // Closes the results window.
+  this.CloseResultsWindow = function()
+  {
+    this.DOMPopupSearchResultsWindow().style.display = 'none';
+    this.DOMSearchClose().style.display = 'none';
+    this.Activate(false);
+  }
+
+  this.CloseSelectionWindow = function()
+  {
+    this.DOMSearchSelectWindow().style.display = 'none';
+  }
+
+  // Performs a search.
+  this.Search = function()
+  {
+    this.keyTimeout = 0;
+
+    // strip leading whitespace
+    var searchValue = this.DOMSearchField().value.replace(/^ +/, "");
+
+    var code = searchValue.toLowerCase().charCodeAt(0);
+    var idxChar = searchValue.substr(0, 1).toLowerCase();
+    if ( 0xD800 <= code && code <= 0xDBFF && searchValue > 1) // surrogate pair
+    {
+      idxChar = searchValue.substr(0, 2);
+    }
+
+    var resultsPage;
+    var resultsPageWithSearch;
+    var hasResultsPage;
+
+    var idx = indexSectionsWithContent[this.searchIndex].indexOf(idxChar);
+    if (idx!=-1)
+    {
+       var hexCode=idx.toString(16);
+       resultsPage = this.resultsPath + '/' + indexSectionNames[this.searchIndex] + '_' + hexCode + '.html';
+       resultsPageWithSearch = resultsPage+'?'+escape(searchValue);
+       hasResultsPage = true;
+    }
+    else // nothing available for this search term
+    {
+       resultsPage = this.resultsPath + '/nomatches.html';
+       resultsPageWithSearch = resultsPage;
+       hasResultsPage = false;
+    }
+
+    window.frames.MSearchResults.location = resultsPageWithSearch;
+    var domPopupSearchResultsWindow = this.DOMPopupSearchResultsWindow();
+
+    if (domPopupSearchResultsWindow.style.display!='block')
+    {
+       var domSearchBox = this.DOMSearchBox();
+       this.DOMSearchClose().style.display = 'inline';
+       if (this.insideFrame)
+       {
+         var domPopupSearchResults = this.DOMPopupSearchResults();
+         domPopupSearchResultsWindow.style.position = 'relative';
+         domPopupSearchResultsWindow.style.display  = 'block';
+         var width = document.body.clientWidth - 8; // the -8 is for IE :-(
+         domPopupSearchResultsWindow.style.width    = width + 'px';
+         domPopupSearchResults.style.width          = width + 'px';
+       }
+       else
+       {
+         var domPopupSearchResults = this.DOMPopupSearchResults();
+         var left = getXPos(domSearchBox) + 150; // domSearchBox.offsetWidth;
+         var top  = getYPos(domSearchBox) + 20;  // domSearchBox.offsetHeight + 1;
+         domPopupSearchResultsWindow.style.display = 'block';
+         left -= domPopupSearchResults.offsetWidth;
+         domPopupSearchResultsWindow.style.top     = top  + 'px';
+         domPopupSearchResultsWindow.style.left    = left + 'px';
+       }
+    }
+
+    this.lastSearchValue = searchValue;
+    this.lastResultsPage = resultsPage;
+  }
+
+  // -------- Activation Functions
+
+  // Activates or deactivates the search panel, resetting things to
+  // their default values if necessary.
+  this.Activate = function(isActive)
+  {
+    if (isActive || // open it
+        this.DOMPopupSearchResultsWindow().style.display == 'block'
+       )
+    {
+      this.DOMSearchBox().className = 'MSearchBoxActive';
+
+      var searchField = this.DOMSearchField();
+
+      if (searchField.value == this.searchLabel) // clear "Search" term upon entry
+      {
+        searchField.value = '';
+        this.searchActive = true;
+      }
+    }
+    else if (!isActive) // directly remove the panel
+    {
+      this.DOMSearchBox().className = 'MSearchBoxInactive';
+      this.DOMSearchField().value   = this.searchLabel;
+      this.searchActive             = false;
+      this.lastSearchValue          = ''
+      this.lastResultsPage          = '';
+    }
+  }
+}
+
+// -----------------------------------------------------------------------
+
+// The class that handles everything on the search results page.
+function SearchResults(name)
+{
+    // The number of matches from the last run of .
+    this.lastMatchCount = 0;
+    this.lastKey = 0;
+    this.repeatOn = false;
+
+    // Toggles the visibility of the passed element ID.
+    this.FindChildElement = function(id)
+    {
+      var parentElement = document.getElementById(id);
+      var element = parentElement.firstChild;
+
+      while (element && element!=parentElement)
+      {
+        if (element.nodeName == 'DIV' && element.className == 'SRChildren')
+        {
+          return element;
+        }
+
+        if (element.nodeName == 'DIV' && element.hasChildNodes())
+        {
+           element = element.firstChild;
+        }
+        else if (element.nextSibling)
+        {
+           element = element.nextSibling;
+        }
+        else
+        {
+          do
+          {
+            element = element.parentNode;
+          }
+          while (element && element!=parentElement && !element.nextSibling);
+
+          if (element && element!=parentElement)
+          {
+            element = element.nextSibling;
+          }
+        }
+      }
+    }
+
+    this.Toggle = function(id)
+    {
+      var element = this.FindChildElement(id);
+      if (element)
+      {
+        if (element.style.display == 'block')
+        {
+          element.style.display = 'none';
+        }
+        else
+        {
+          element.style.display = 'block';
+        }
+      }
+    }
+
+    // Searches for the passed string.  If there is no parameter,
+    // it takes it from the URL query.
+    //
+    // Always returns true, since other documents may try to call it
+    // and that may or may not be possible.
+    this.Search = function(search)
+    {
+      if (!search) // get search word from URL
+      {
+        search = window.location.search;
+        search = search.substring(1);  // Remove the leading '?'
+        search = unescape(search);
+      }
+
+      search = search.replace(/^ +/, ""); // strip leading spaces
+      search = search.replace(/ +$/, ""); // strip trailing spaces
+      search = search.toLowerCase();
+      search = convertToId(search);
+
+      var resultRows = document.getElementsByTagName("div");
+      var matches = 0;
+
+      var i = 0;
+      while (i < resultRows.length)
+      {
+        var row = resultRows.item(i);
+        if (row.className == "SRResult")
+        {
+          var rowMatchName = row.id.toLowerCase();
+          rowMatchName = rowMatchName.replace(/^sr\d*_/, ''); // strip 'sr123_'
+
+          if (search.length<=rowMatchName.length &&
+             rowMatchName.substr(0, search.length)==search)
+          {
+            row.style.display = 'block';
+            matches++;
+          }
+          else
+          {
+            row.style.display = 'none';
+          }
+        }
+        i++;
+      }
+      document.getElementById("Searching").style.display='none';
+      if (matches == 0) // no results
+      {
+        document.getElementById("NoMatches").style.display='block';
+      }
+      else // at least one result
+      {
+        document.getElementById("NoMatches").style.display='none';
+      }
+      this.lastMatchCount = matches;
+      return true;
+    }
+
+    // return the first item with index index or higher that is visible
+    this.NavNext = function(index)
+    {
+      var focusItem;
+      while (1)
+      {
+        var focusName = 'Item'+index;
+        focusItem = document.getElementById(focusName);
+        if (focusItem && focusItem.parentNode.parentNode.style.display=='block')
+        {
+          break;
+        }
+        else if (!focusItem) // last element
+        {
+          break;
+        }
+        focusItem=null;
+        index++;
+      }
+      return focusItem;
+    }
+
+    this.NavPrev = function(index)
+    {
+      var focusItem;
+      while (1)
+      {
+        var focusName = 'Item'+index;
+        focusItem = document.getElementById(focusName);
+        if (focusItem && focusItem.parentNode.parentNode.style.display=='block')
+        {
+          break;
+        }
+        else if (!focusItem) // last element
+        {
+          break;
+        }
+        focusItem=null;
+        index--;
+      }
+      return focusItem;
+    }
+
+    this.ProcessKeys = function(e)
+    {
+      if (e.type == "keydown")
+      {
+        this.repeatOn = false;
+        this.lastKey = e.keyCode;
+      }
+      else if (e.type == "keypress")
+      {
+        if (!this.repeatOn)
+        {
+          if (this.lastKey) this.repeatOn = true;
+          return false; // ignore first keypress after keydown
+        }
+      }
+      else if (e.type == "keyup")
+      {
+        this.lastKey = 0;
+        this.repeatOn = false;
+      }
+      return this.lastKey!=0;
+    }
+
+    this.Nav = function(evt,itemIndex)
+    {
+      var e  = (evt) ? evt : window.event; // for IE
+      if (e.keyCode==13) return true;
+      if (!this.ProcessKeys(e)) return false;
+
+      if (this.lastKey==38) // Up
+      {
+        var newIndex = itemIndex-1;
+        var focusItem = this.NavPrev(newIndex);
+        if (focusItem)
+        {
+          var child = this.FindChildElement(focusItem.parentNode.parentNode.id);
+          if (child && child.style.display == 'block') // children visible
+          {
+            var n=0;
+            var tmpElem;
+            while (1) // search for last child
+            {
+              tmpElem = document.getElementById('Item'+newIndex+'_c'+n);
+              if (tmpElem)
+              {
+                focusItem = tmpElem;
+              }
+              else // found it!
+              {
+                break;
+              }
+              n++;
+            }
+          }
+        }
+        if (focusItem)
+        {
+          focusItem.focus();
+        }
+        else // return focus to search field
+        {
+           parent.document.getElementById("MSearchField").focus();
+        }
+      }
+      else if (this.lastKey==40) // Down
+      {
+        var newIndex = itemIndex+1;
+        var focusItem;
+        var item = document.getElementById('Item'+itemIndex);
+        var elem = this.FindChildElement(item.parentNode.parentNode.id);
+        if (elem && elem.style.display == 'block') // children visible
+        {
+          focusItem = document.getElementById('Item'+itemIndex+'_c0');
+        }
+        if (!focusItem) focusItem = this.NavNext(newIndex);
+        if (focusItem)  focusItem.focus();
+      }
+      else if (this.lastKey==39) // Right
+      {
+        var item = document.getElementById('Item'+itemIndex);
+        var elem = this.FindChildElement(item.parentNode.parentNode.id);
+        if (elem) elem.style.display = 'block';
+      }
+      else if (this.lastKey==37) // Left
+      {
+        var item = document.getElementById('Item'+itemIndex);
+        var elem = this.FindChildElement(item.parentNode.parentNode.id);
+        if (elem) elem.style.display = 'none';
+      }
+      else if (this.lastKey==27) // Escape
+      {
+        parent.searchBox.CloseResultsWindow();
+        parent.document.getElementById("MSearchField").focus();
+      }
+      else if (this.lastKey==13) // Enter
+      {
+        return true;
+      }
+      return false;
+    }
+
+    this.NavChild = function(evt,itemIndex,childIndex)
+    {
+      var e  = (evt) ? evt : window.event; // for IE
+      if (e.keyCode==13) return true;
+      if (!this.ProcessKeys(e)) return false;
+
+      if (this.lastKey==38) // Up
+      {
+        if (childIndex>0)
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+
+
diff --git a/docs/structfile__desc__t.html b/docs/structfile__desc__t.html
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+PIO: file_desc_t Struct Reference
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+  
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+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
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+  
    
+List of all members |
+Public Attributes  
    
+  
    
+
    file_desc_t Struct Reference
      
    
+
    
+
    
+
+
    File descriptor structure.  
+ More...
    
+
+
    #include <pio.h>
    
+
    
+Collaboration diagram for file_desc_t:
    
+
    
+
    Collaboration graph
    
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    [legend]
    
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+
    
+Public Attributes
    iosystem_desc_t * iosystem
     The IO system ID used to open this file.  More...
     
    int fh
     The ncid returned for this file by the underlying library (netcdf or pnetcdf).  More...
     
    int pio_ncid
     The ncid that will be returned to the user.  More...
     
    int iotype
     The IOTYPE value that was used to open this file.  More...
     
    struct var_desc_t * varlist
     List of variables in this file.  More...
     
    int nvars
     Number of variables.  More...
     
    int writable
     True if file can be written to.  More...
     
    struct wmulti_buffer buffer
     The wmulti_buffer is used to aggregate multiple variables with the same communication pattern prior to a write.  More...
     
    void * iobuf
     Data buffer for this file.  More...
     
    int pio_type
     PIO data type.  More...
     
    struct file_desc_t * next
     Pointer to the next file_desc_t in the list of open files.  More...
     
    int do_io
     True if this task should participate in IO (only true for one task with netcdf serial files.  More...
     
    
+
    Detailed Description
    
+
    File descriptor structure. 
    
+
    This structure holds information associated with each open file 
    
+
    Member Data Documentation
    
+
+
    ◆ buffer
    
+
+
    
+
    
+      
+        
+          
+        
+      
    struct wmulti_buffer file_desc_t::buffer
    
+
    
+
+
    The wmulti_buffer is used to aggregate multiple variables with the same communication pattern prior to a write. 
    
+
+
    
+
    
+
+
    ◆ do_io
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int file_desc_t::do_io
    
+
    
+
+
    True if this task should participate in IO (only true for one task with netcdf serial files. 
    
+
+
    
+
    
+
+
    ◆ fh
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int file_desc_t::fh
    
+
    
+
+
    The ncid returned for this file by the underlying library (netcdf or pnetcdf). 
    
+
+
    
+
    
+
+
    ◆ iobuf
    
+
+
    
+
    
+      
+        
+          
+        
+      
    void* file_desc_t::iobuf
    
+
    
+
+
    Data buffer for this file. 
    
+
+
    
+
    
+
+
    ◆ iosystem
    
+
+
    
+
    
+      
+        
+          
+        
+      
    iosystem_desc_t* file_desc_t::iosystem
    
+
    
+
+
    The IO system ID used to open this file. 
    
+
+
    
+
    
+
+
    ◆ iotype
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int file_desc_t::iotype
    
+
    
+
+
    The IOTYPE value that was used to open this file. 
    
+
+
    
+
    
+
+
    ◆ next
    
+
+
    
+
    
+      
+        
+          
+        
+      
    struct file_desc_t* file_desc_t::next
    
+
    
+
+
    Pointer to the next file_desc_t in the list of open files. 
    
+
+
    
+
    
+
+
    ◆ nvars
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int file_desc_t::nvars
    
+
    
+
+
    Number of variables. 
    
+
+
    
+
    
+
+
    ◆ pio_ncid
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int file_desc_t::pio_ncid
    
+
    
+
+
    The ncid that will be returned to the user. 
    
+
+
    
+
    
+
+
    ◆ pio_type
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int file_desc_t::pio_type
    
+
    
+
+
    PIO data type. 
    
+
+
    
+
    
+
+
    ◆ varlist
    
+
+
    
+
    
+      
+        
+          
+        
+      
    struct var_desc_t* file_desc_t::varlist
    
+
    
+
+
    List of variables in this file. 
    
+
+
    
+
    
+
+
    ◆ writable
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int file_desc_t::writable
    
+
    
+
+
    True if file can be written to. 
    
+
+
    
+
    
+
    The documentation for this struct was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structfile__desc__t__coll__graph.map b/docs/structfile__desc__t__coll__graph.map
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index 00000000000..98832e4f89a
--- /dev/null
+++ b/docs/structfile__desc__t__coll__graph.map
@@ -0,0 +1,7 @@
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diff --git a/docs/structfile__desc__t__coll__graph.md5 b/docs/structfile__desc__t__coll__graph.md5
new file mode 100644
index 00000000000..34f2722d07a
--- /dev/null
+++ b/docs/structfile__desc__t__coll__graph.md5
@@ -0,0 +1 @@
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diff --git a/docs/structfile__desc__t__coll__graph.png b/docs/structfile__desc__t__coll__graph.png
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+PIO: Member List
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    PIO
+    2.4.0
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    io_desc_t Member List
      
    
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+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
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+PIO: io_desc_t Struct Reference
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    PIO
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+List of all members |
+Public Attributes  
    
+  
    
+
    io_desc_t Struct Reference
      
    
+
    
+
    
+
+
    IO descriptor structure.  
+ More...
    
+
+
    #include <pio.h>
    
+
    
+Collaboration diagram for io_desc_t:
    
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    Collaboration graph
    
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    [legend]
    
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+Public Attributes
    int ioid
     The ID of this io_desc_t.  More...
     
    int maplen
     The length of the decomposition map.  More...
     
    PIO_Offset * map
     A 1-D array with iodesc->maplen elements, which are the 1-based mappings to the global array for that task.  More...
     
    int * remap
     If the map passed in is not monotonically increasing then map is sorted and remap is an array of original indices of map.  More...
     
    int nrecvs
     Number of tasks involved in the communication between comp and io tasks.  More...
     
    int ndof
     Local size of the decomposition array on the compute node.  More...
     
    int ndims
     All vars included in this io_desc_t have the same number of dimensions.  More...
     
    int * dimlen
     An array of size ndims with the global length of each dimension.  More...
     
    int num_aiotasks
     The actual number of IO tasks participating.  More...
     
    int rearranger
     The rearranger in use for this variable.  More...
     
    int maxregions
     Maximum number of regions in the decomposition.  More...
     
    
+bool needsfill
     Does this decomp leave holes in the field (true) or write everywhere (false) 
     
    bool needssort
     If the map is not monotonically increasing we will need to sort it.  More...
     
    int maxbytes
     The maximum number of bytes of this iodesc before flushing.  More...
     
    int piotype
     The PIO type of the data.  More...
     
    int piotype_size
     The size of one element of the piotype.  More...
     
    MPI_Datatype mpitype
     The MPI type of the data.  More...
     
    int mpitype_size
     The size in bytes of a datum of MPI type mpitype.  More...
     
    PIO_Offset llen
     Length of the iobuffer on this task for a single field on the IO node.  More...
     
    int maxiobuflen
     Maximum llen participating.  More...
     
    int * rfrom
     Array (length nrecvs) of computation tasks received from.  More...
     
    int * rcount
     Array (length nrecvs) of counts of data to be received from each computation task by the IO tasks.  More...
     
    int * scount
     Array (length numiotasks) of data counts to send to each task in the communication in pio_swapm().  More...
     
    PIO_Offset * sindex
     Array (length ndof) for the BOX rearranger with the index for computation taks (send side during writes).  More...
     
    PIO_Offset * rindex
     Index for the IO tasks (receive side during writes).  More...
     
    MPI_Datatype * rtype
     Array (of length nrecvs) of receive MPI types in pio_swapm() call.  More...
     
    MPI_Datatype * stype
     Array of send MPI types in pio_swapm() call.  More...
     
    int num_stypes
     Number of send MPI types in pio_swapm() call.  More...
     
    int holegridsize
     Used when writing fill data.  More...
     
    
+int maxholegridsize
     max holegridsize across all io tasks, needed for netcdf and netcdf4c serial 
     
    int maxfillregions
     Used when writing fill data.  More...
     
    io_region * firstregion
     Linked list of regions.  More...
     
    io_region * fillregion
     Used when writing fill data.  More...
     
    
+rearr_opt_t rearr_opts
     Rearranger flow control options (handshake, non-blocking sends, pending requests) 
     
    MPI_Comm subset_comm
     In the subset communicator each io task is associated with a unique group of comp tasks this is the communicator for that group.  More...
     
    struct io_desc_t * next
     Pointer to the next io_desc_t in the list.  More...
     
    
+
    Detailed Description
    
+
    IO descriptor structure. 
    
+
    This structure defines the mapping for a given variable between compute and IO decomposition. 
    
+
    Member Data Documentation
    
+
+
    ◆ dimlen
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int* io_desc_t::dimlen
    
+
    
+
+
    An array of size ndims with the global length of each dimension. 
    
+
+
    
+
    
+
+
    ◆ fillregion
    
+
+
    
+
    
+      
+        
+          
+        
+      
    io_region* io_desc_t::fillregion
    
+
    
+
+
    Used when writing fill data. 
    
+
+
    
+
    
+
+
    ◆ firstregion
    
+
+
    
+
    
+      
+        
+          
+        
+      
    io_region* io_desc_t::firstregion
    
+
    
+
+
    Linked list of regions. 
    
+
+
    
+
    
+
+
    ◆ holegridsize
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::holegridsize
    
+
    
+
+
    Used when writing fill data. 
    
+
+
    
+
    
+
+
    ◆ ioid
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::ioid
    
+
    
+
+
    The ID of this io_desc_t. 
    
+
+
    
+
    
+
+
    ◆ llen
    
+
+
    
+
    
+      
+        
+          
+        
+      
    PIO_Offset io_desc_t::llen
    
+
    
+
+
    Length of the iobuffer on this task for a single field on the IO node. 
    
+
    The arrays from compute nodes gathered and rearranged to the io-nodes (which are sometimes collocated with compute nodes), each io task contains data from the compmap of one or more compute tasks in the iomap array. 
    
+
+
    
+
    
+
+
    ◆ map
    
+
+
    
+
    
+      
+        
+          
+        
+      
    PIO_Offset* io_desc_t::map
    
+
    
+
+
    A 1-D array with iodesc->maplen elements, which are the 1-based mappings to the global array for that task. 
    
+
+
    
+
    
+
+
    ◆ maplen
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::maplen
    
+
    
+
+
    The length of the decomposition map. 
    
+
+
    
+
    
+
+
    ◆ maxbytes
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::maxbytes
    
+
    
+
+
    The maximum number of bytes of this iodesc before flushing. 
    
+
+
    
+
    
+
+
    ◆ maxfillregions
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::maxfillregions
    
+
    
+
+
    Used when writing fill data. 
    
+
+
    
+
    
+
+
    ◆ maxiobuflen
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::maxiobuflen
    
+
    
+
+
    Maximum llen participating. 
    
+
+
    
+
    
+
+
    ◆ maxregions
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::maxregions
    
+
    
+
+
    Maximum number of regions in the decomposition. 
    
+
+
    
+
    
+
+
    ◆ mpitype
    
+
+
    
+
    
+      
+        
+          
+        
+      
    MPI_Datatype io_desc_t::mpitype
    
+
    
+
+
    The MPI type of the data. 
    
+
+
    
+
    
+
+
    ◆ mpitype_size
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::mpitype_size
    
+
    
+
+
    The size in bytes of a datum of MPI type mpitype. 
    
+
+
    
+
    
+
+
    ◆ ndims
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::ndims
    
+
    
+
+
    All vars included in this io_desc_t have the same number of dimensions. 
    
+
+
    
+
    
+
+
    ◆ ndof
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::ndof
    
+
    
+
+
    Local size of the decomposition array on the compute node. 
    
+
+
    
+
    
+
+
    ◆ needssort
    
+
+
    
+
    
+      
+        
+          
+        
+      
    bool io_desc_t::needssort
    
+
    
+
+
    If the map is not monotonically increasing we will need to sort it. 
    
+
+
    
+
    
+
+
    ◆ next
    
+
+
    
+
    
+      
+        
+          
+        
+      
    struct io_desc_t* io_desc_t::next
    
+
    
+
+
    Pointer to the next io_desc_t in the list. 
    
+
+
    
+
    
+
+
    ◆ nrecvs
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::nrecvs
    
+
    
+
+
    Number of tasks involved in the communication between comp and io tasks. 
    
+
+
    
+
    
+
+
    ◆ num_aiotasks
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::num_aiotasks
    
+
    
+
+
    The actual number of IO tasks participating. 
    
+
+
    
+
    
+
+
    ◆ num_stypes
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::num_stypes
    
+
    
+
+
    Number of send MPI types in pio_swapm() call. 
    
+
+
    
+
    
+
+
    ◆ piotype
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::piotype
    
+
    
+
+
    The PIO type of the data. 
    
+
+
    
+
    
+
+
    ◆ piotype_size
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::piotype_size
    
+
    
+
+
    The size of one element of the piotype. 
    
+
+
    
+
    
+
+
    ◆ rcount
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int* io_desc_t::rcount
    
+
    
+
+
    Array (length nrecvs) of counts of data to be received from each computation task by the IO tasks. 
    
+
+
    
+
    
+
+
    ◆ rearranger
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_desc_t::rearranger
    
+
    
+
+
    The rearranger in use for this variable. 
    
+
+
    
+
    
+
+
    ◆ remap
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int* io_desc_t::remap
    
+
    
+
+
    If the map passed in is not monotonically increasing then map is sorted and remap is an array of original indices of map. 
    
+
+
    
+
    
+
+
    ◆ rfrom
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int* io_desc_t::rfrom
    
+
    
+
+
    Array (length nrecvs) of computation tasks received from. 
    
+
+
    
+
    
+
+
    ◆ rindex
    
+
+
    
+
    
+      
+        
+          
+        
+      
    PIO_Offset* io_desc_t::rindex
    
+
    
+
+
    Index for the IO tasks (receive side during writes). 
    
+
+
    
+
    
+
+
    ◆ rtype
    
+
+
    
+
    
+      
+        
+          
+        
+      
    MPI_Datatype* io_desc_t::rtype
    
+
    
+
+
    Array (of length nrecvs) of receive MPI types in pio_swapm() call. 
    
+
+
    
+
    
+
+
    ◆ scount
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int* io_desc_t::scount
    
+
    
+
+
    Array (length numiotasks) of data counts to send to each task in the communication in pio_swapm(). 
    
+
+
    
+
    
+
+
    ◆ sindex
    
+
+
    
+
    
+      
+        
+          
+        
+      
    PIO_Offset* io_desc_t::sindex
    
+
    
+
+
    Array (length ndof) for the BOX rearranger with the index for computation taks (send side during writes). 
    
+
+
    
+
    
+
+
    ◆ stype
    
+
+
    
+
    
+      
+        
+          
+        
+      
    MPI_Datatype* io_desc_t::stype
    
+
    
+
+
    Array of send MPI types in pio_swapm() call. 
    
+
+
    
+
    
+
+
    ◆ subset_comm
    
+
+
    
+
    
+      
+        
+          
+        
+      
    MPI_Comm io_desc_t::subset_comm
    
+
    
+
+
    In the subset communicator each io task is associated with a unique group of comp tasks this is the communicator for that group. 
    
+
+
    
+
    
+
    The documentation for this struct was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structio__desc__t__coll__graph.map b/docs/structio__desc__t__coll__graph.map
new file mode 100644
index 00000000000..6e9c17e679e
--- /dev/null
+++ b/docs/structio__desc__t__coll__graph.map
@@ -0,0 +1,5 @@
+
+
+
+
+
diff --git a/docs/structio__desc__t__coll__graph.md5 b/docs/structio__desc__t__coll__graph.md5
new file mode 100644
index 00000000000..34e0b2c5b65
--- /dev/null
+++ b/docs/structio__desc__t__coll__graph.md5
@@ -0,0 +1 @@
+4579e9c6267cf9d606a4ba42bf569f08
\ No newline at end of file
diff --git a/docs/structio__desc__t__coll__graph.png b/docs/structio__desc__t__coll__graph.png
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zTjii#C)C
+
+
+
+
+
+
+PIO: Member List
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
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+
    
+
    
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+
    
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+
    
+
+
    
+
    
+  
    
+
    io_region Member List
      
    
+
    
+
    
+
+
    This is the complete list of members for io_region, including all inherited members.
    
+
+  
+  
+  
+  
+
    countio_region
    loffsetio_region
    nextio_region
    startio_region
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structio__region.html b/docs/structio__region.html
new file mode 100644
index 00000000000..a64cb250abc
--- /dev/null
+++ b/docs/structio__region.html
@@ -0,0 +1,178 @@
+
+
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+
+PIO: io_region Struct Reference
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+
    
+
    
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+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
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+
    
+
    
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+
    
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+
    
+
    
+  
    
+List of all members |
+Public Attributes  
    
+  
    
+
    io_region Struct Reference
      
    
+
    
+
    
+
+
    IO region structure.  
+ More...
    
+
+
    #include <pio.h>
    
+
    
+Collaboration diagram for io_region:
    
+
    
+
    Collaboration graph
    
+
+
+
    [legend]
    
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+
    
+Public Attributes
    int loffset
     The offset from the beginning of the data buffer to the beginning of this region.  More...
     
    PIO_Offset * start
     Start array for this region.  More...
     
    PIO_Offset * count
     Count array for this region.  More...
     
    struct io_region * next
     Pointer to the next io_region in the list.  More...
     
    
+
    Detailed Description
    
+
    IO region structure. 
    
+
    Each IO region is a unit of data which can be described using start and count arrays. Each IO task may in general have multiple io regions per variable. The box rearranger will have at most one io region per variable.
    
+
    The write from a particular IO task is divided into 1 or more regions each of which can be described using start and count. The io_region typedef is a linked list of those regions. 
    
+
    Member Data Documentation
    
+
+
    ◆ count
    
+
+
    
+
    
+      
+        
+          
+        
+      
    PIO_Offset* io_region::count
    
+
    
+
+
    Count array for this region. 
    
+
+
    
+
    
+
+
    ◆ loffset
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int io_region::loffset
    
+
    
+
+
    The offset from the beginning of the data buffer to the beginning of this region. 
    
+
+
    
+
    
+
+
    ◆ next
    
+
+
    
+
    
+      
+        
+          
+        
+      
    struct io_region* io_region::next
    
+
    
+
+
    Pointer to the next io_region in the list. 
    
+
+
    
+
    
+
+
    ◆ start
    
+
+
    
+
    
+      
+        
+          
+        
+      
    PIO_Offset* io_region::start
    
+
    
+
+
    Start array for this region. 
    
+
+
    
+
    
+
    The documentation for this struct was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structio__region__coll__graph.map b/docs/structio__region__coll__graph.map
new file mode 100644
index 00000000000..c99564232b3
--- /dev/null
+++ b/docs/structio__region__coll__graph.map
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+
+
diff --git a/docs/structio__region__coll__graph.md5 b/docs/structio__region__coll__graph.md5
new file mode 100644
index 00000000000..50849f27d0f
--- /dev/null
+++ b/docs/structio__region__coll__graph.md5
@@ -0,0 +1 @@
+c56f4dd96c704270219bbd86b3a44a4a
\ No newline at end of file
diff --git a/docs/structio__region__coll__graph.png b/docs/structio__region__coll__graph.png
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+
+
+
+
+
+
+PIO: Member List
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
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+
    
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+
    
+  
    
+
    iosystem_desc_t Member List
      
    
+
    
+
    
+
+
    This is the complete list of members for iosystem_desc_t, including all inherited members.
    
+
+  
+  
+  
+  
+  
+  
+  
+  
+  
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+
    asynciosystem_desc_t
    comp_commiosystem_desc_t
    comp_idxiosystem_desc_t
    comp_rankiosystem_desc_t
    compmasteriosystem_desc_t
    compprociosystem_desc_t
    compranksiosystem_desc_t
    comprootiosystem_desc_t
    default_rearrangeriosystem_desc_t
    error_handleriosystem_desc_t
    infoiosystem_desc_t
    intercommiosystem_desc_t
    io_commiosystem_desc_t
    io_rankiosystem_desc_t
    iomasteriosystem_desc_t
    ioprociosystem_desc_t
    ioranksiosystem_desc_t
    iorootiosystem_desc_t
    iosysidiosystem_desc_t
    my_commiosystem_desc_t
    nextiosystem_desc_t
    num_comptasksiosystem_desc_t
    num_iotasksiosystem_desc_t
    num_uniontasksiosystem_desc_t
    rearr_optsiosystem_desc_t
    union_commiosystem_desc_t
    union_rankiosystem_desc_t
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structiosystem__desc__t.html b/docs/structiosystem__desc__t.html
new file mode 100644
index 00000000000..3aa57edfb22
--- /dev/null
+++ b/docs/structiosystem__desc__t.html
@@ -0,0 +1,619 @@
+
+
+
+
+
+
+
+PIO: iosystem_desc_t Struct Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
    
+
    
+  
    
+List of all members |
+Public Attributes  
    
+  
    
+
    iosystem_desc_t Struct Reference
      
    
+
    
+
    
+
+
    IO system descriptor structure.  
+ More...
    
+
+
    #include <pio.h>
    
+
    
+Collaboration diagram for iosystem_desc_t:
    
+
    
+
    Collaboration graph
    
+
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+
+
+
    [legend]
    
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+
+
+
    
+Public Attributes
    int iosysid
     The ID of this iosystem_desc_t.  More...
     
    MPI_Comm union_comm
     This is an MPI intra communicator that includes all the tasks in both the IO and the computation communicators.  More...
     
    MPI_Comm io_comm
     This is an MPI intra communicator that includes all the tasks involved in IO.  More...
     
    MPI_Comm comp_comm
     This is an MPI intra communicator that includes all the tasks involved in computation.  More...
     
    MPI_Comm intercomm
     This is an MPI inter communicator between IO communicator and computation communicator.  More...
     
    MPI_Comm my_comm
     This is a copy (but not an MPI copy) of either the comp (for non-async) or the union (for async) communicator.  More...
     
    int num_iotasks
     The number of tasks in the IO communicator.  More...
     
    int num_comptasks
     The number of tasks in the computation communicator.  More...
     
    int num_uniontasks
     The number of tasks in the union communicator (will be num_comptasks for non-async, num_comptasks + num_iotasks for async).  More...
     
    int union_rank
     Rank of this task in the union communicator.  More...
     
    int comp_rank
     The rank of this process in the computation communicator, or -1 if this process is not part of the computation communicator.  More...
     
    int io_rank
     The rank of this process in the IO communicator, or -1 if this process is not part of the IO communicator.  More...
     
    int iomaster
     Set to MPI_ROOT if this task is the master of IO communicator, 0 otherwise.  More...
     
    int compmaster
     Set to MPI_ROOT if this task is the master of comp communicator, 0 otherwise.  More...
     
    int ioroot
     Rank of IO root task (which is rank 0 in io_comm) in the union communicator.  More...
     
    int comproot
     Rank of computation root task (which is rank 0 in comm_comms[cmp]) in the union communicator.  More...
     
    int * ioranks
     An array of the ranks of all IO tasks within the union communicator.  More...
     
    int * compranks
     An array of the ranks of all computation tasks within the union communicator.  More...
     
    int error_handler
     Controls handling errors.  More...
     
    int default_rearranger
     The rearranger decides which parts of a distributed array are handled by which IO tasks.  More...
     
    bool async
     True if asynchronous interface is in use.  More...
     
    bool ioproc
     True if this task is a member of the IO communicator.  More...
     
    bool compproc
     True if this task is a member of a computation communicator.  More...
     
    MPI_Info info
     MPI Info object.  More...
     
    int comp_idx
     Index of this component in the list of components.  More...
     
    rearr_opt_t rearr_opts
     Rearranger options.  More...
     
    struct iosystem_desc_t * next
     Pointer to the next iosystem_desc_t in the list.  More...
     
    
+
    Detailed Description
    
+
    IO system descriptor structure. 
    
+
    This structure contains the general IO subsystem data and MPI structure 
    
+
    Member Data Documentation
    
+
+
    ◆ async
    
+
+
    
+
    
+      
+        
+          
+        
+      
    bool iosystem_desc_t::async
    
+
    
+
+
    True if asynchronous interface is in use. 
    
+
+
    
+
    
+
+
    ◆ comp_comm
    
+
+
    
+
    
+      
+        
+          
+        
+      
    MPI_Comm iosystem_desc_t::comp_comm
    
+
    
+
+
    This is an MPI intra communicator that includes all the tasks involved in computation. 
    
+
+
    
+
    
+
+
    ◆ comp_idx
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int iosystem_desc_t::comp_idx
    
+
    
+
+
    Index of this component in the list of components. 
    
+
+
    
+
    
+
+
    ◆ comp_rank
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int iosystem_desc_t::comp_rank
    
+
    
+
+
    The rank of this process in the computation communicator, or -1 if this process is not part of the computation communicator. 
    
+
+
    
+
    
+
+
    ◆ compmaster
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int iosystem_desc_t::compmaster
    
+
    
+
+
    Set to MPI_ROOT if this task is the master of comp communicator, 0 otherwise. 
    
+
+
    
+
    
+
+
    ◆ compproc
    
+
+
    
+
    
+      
+        
+          
+        
+      
    bool iosystem_desc_t::compproc
    
+
    
+
+
    True if this task is a member of a computation communicator. 
    
+
+
    
+
    
+
+
    ◆ compranks
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int* iosystem_desc_t::compranks
    
+
    
+
+
    An array of the ranks of all computation tasks within the union communicator. 
    
+
+
    
+
    
+
+
    ◆ comproot
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int iosystem_desc_t::comproot
    
+
    
+
+
    Rank of computation root task (which is rank 0 in comm_comms[cmp]) in the union communicator. 
    
+
    Will always = number of IO tasks in async situations. 
    
+
+
    
+
    
+
+
    ◆ default_rearranger
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int iosystem_desc_t::default_rearranger
    
+
    
+
+
    The rearranger decides which parts of a distributed array are handled by which IO tasks. 
    
+
+
    
+
    
+
+
    ◆ error_handler
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int iosystem_desc_t::error_handler
    
+
    
+
+
    Controls handling errors. 
    
+
+
    
+
    
+
+
    ◆ info
    
+
+
    
+
    
+      
+        
+          
+        
+      
    MPI_Info iosystem_desc_t::info
    
+
    
+
+
    MPI Info object. 
    
+
+
    
+
    
+
+
    ◆ intercomm
    
+
+
    
+
    
+      
+        
+          
+        
+      
    MPI_Comm iosystem_desc_t::intercomm
    
+
    
+
+
    This is an MPI inter communicator between IO communicator and computation communicator. 
    
+
+
    
+
    
+
+
    ◆ io_comm
    
+
+
    
+
    
+      
+        
+          
+        
+      
    MPI_Comm iosystem_desc_t::io_comm
    
+
    
+
+
    This is an MPI intra communicator that includes all the tasks involved in IO. 
    
+
+
    
+
    
+
+
    ◆ io_rank
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int iosystem_desc_t::io_rank
    
+
    
+
+
    The rank of this process in the IO communicator, or -1 if this process is not part of the IO communicator. 
    
+
+
    
+
    
+
+
    ◆ iomaster
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int iosystem_desc_t::iomaster
    
+
    
+
+
    Set to MPI_ROOT if this task is the master of IO communicator, 0 otherwise. 
    
+
+
    
+
    
+
+
    ◆ ioproc
    
+
+
    
+
    
+      
+        
+          
+        
+      
    bool iosystem_desc_t::ioproc
    
+
    
+
+
    True if this task is a member of the IO communicator. 
    
+
+
    
+
    
+
+
    ◆ ioranks
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int* iosystem_desc_t::ioranks
    
+
    
+
+
    An array of the ranks of all IO tasks within the union communicator. 
    
+
+
    
+
    
+
+
    ◆ ioroot
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int iosystem_desc_t::ioroot
    
+
    
+
+
    Rank of IO root task (which is rank 0 in io_comm) in the union communicator. 
    
+
    Will always be 0 for async situations. 
    
+
+
    
+
    
+
+
    ◆ iosysid
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int iosystem_desc_t::iosysid
    
+
    
+
+
    The ID of this iosystem_desc_t. 
    
+
    This will be obtained by calling PIOc_Init_Intercomm() or PIOc_Init_Intracomm(). 
    
+
+
    
+
    
+
+
    ◆ my_comm
    
+
+
    
+
    
+      
+        
+          
+        
+      
    MPI_Comm iosystem_desc_t::my_comm
    
+
    
+
+
    This is a copy (but not an MPI copy) of either the comp (for non-async) or the union (for async) communicator. 
    
+
+
    
+
    
+
+
    ◆ next
    
+
+
    
+
    
+      
+        
+          
+        
+      
    struct iosystem_desc_t* iosystem_desc_t::next
    
+
    
+
+
    Pointer to the next iosystem_desc_t in the list. 
    
+
+
    
+
    
+
+
    ◆ num_comptasks
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int iosystem_desc_t::num_comptasks
    
+
    
+
+
    The number of tasks in the computation communicator. 
    
+
+
    
+
    
+
+
    ◆ num_iotasks
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int iosystem_desc_t::num_iotasks
    
+
    
+
+
    The number of tasks in the IO communicator. 
    
+
+
    
+
    
+
+
    ◆ num_uniontasks
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int iosystem_desc_t::num_uniontasks
    
+
    
+
+
    The number of tasks in the union communicator (will be num_comptasks for non-async, num_comptasks + num_iotasks for async). 
    
+
+
    
+
    
+
+
    ◆ rearr_opts
    
+
+
    
+
    
+      
+        
+          
+        
+      
    rearr_opt_t iosystem_desc_t::rearr_opts
    
+
    
+
+
    Rearranger options. 
    
+
+
    
+
    
+
+
    ◆ union_comm
    
+
+
    
+
    
+      
+        
+          
+        
+      
    MPI_Comm iosystem_desc_t::union_comm
    
+
    
+
+
    This is an MPI intra communicator that includes all the tasks in both the IO and the computation communicators. 
    
+
+
    
+
    
+
+
    ◆ union_rank
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int iosystem_desc_t::union_rank
    
+
    
+
+
    Rank of this task in the union communicator. 
    
+
+
    
+
    
+
    The documentation for this struct was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structiosystem__desc__t__coll__graph.map b/docs/structiosystem__desc__t__coll__graph.map
new file mode 100644
index 00000000000..758dee7b9e3
--- /dev/null
+++ b/docs/structiosystem__desc__t__coll__graph.map
@@ -0,0 +1,4 @@
+
+
+
+
diff --git a/docs/structiosystem__desc__t__coll__graph.md5 b/docs/structiosystem__desc__t__coll__graph.md5
new file mode 100644
index 00000000000..eb025bb4125
--- /dev/null
+++ b/docs/structiosystem__desc__t__coll__graph.md5
@@ -0,0 +1 @@
+d0424cf4e91054794e993b19916fce3a
\ No newline at end of file
diff --git a/docs/structiosystem__desc__t__coll__graph.png b/docs/structiosystem__desc__t__coll__graph.png
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+
+
+
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+
+
+PIO: Member List
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+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+
    pio_types::decompmap_t Member List
      
    
+
    
+
    
+
+
    This is the complete list of members for pio_types::decompmap_t, including all inherited members.
    
+
+  
+  
+
    length (defined in pio_types::decompmap_t)pio_types::decompmap_t
    start (defined in pio_types::decompmap_t)pio_types::decompmap_t
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpio__types_1_1decompmap__t.html b/docs/structpio__types_1_1decompmap__t.html
new file mode 100644
index 00000000000..97a290b6d06
--- /dev/null
+++ b/docs/structpio__types_1_1decompmap__t.html
@@ -0,0 +1,95 @@
+
+
+
+
+
+
+
+PIO: pio_types::decompmap_t Type Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
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+
    
+
    
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+  
    
+List of all members |
+Public Attributes  
    
+  
    
+
    pio_types::decompmap_t Type Reference
      
    
+
    
+
    
+
+
+
+
+
+
+
    
+Public Attributes
    
+integer(i4) start
     
    
+integer(i4) length
     
    
+
    The documentation for this type was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpio__types_1_1file__desc__t-members.html b/docs/structpio__types_1_1file__desc__t-members.html
new file mode 100644
index 00000000000..b97ba009f41
--- /dev/null
+++ b/docs/structpio__types_1_1file__desc__t-members.html
@@ -0,0 +1,84 @@
+
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+PIO: Member List
+
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+
    
+
    
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+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+
    pio_types::file_desc_t Member List
      
    
+
    
+
    
+
+
    This is the complete list of members for pio_types::file_desc_t, including all inherited members.
    
+
+  
+  
+
    fh (defined in pio_types::file_desc_t)pio_types::file_desc_t
    iosystem (defined in pio_types::file_desc_t)pio_types::file_desc_t
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpio__types_1_1file__desc__t.html b/docs/structpio__types_1_1file__desc__t.html
new file mode 100644
index 00000000000..adb37e25bc4
--- /dev/null
+++ b/docs/structpio__types_1_1file__desc__t.html
@@ -0,0 +1,108 @@
+
+
+
+
+
+
+
+PIO: pio_types::file_desc_t Type Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
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+
    
+  
    
+List of all members |
+Public Attributes  
    
+  
    
+
    pio_types::file_desc_t Type Reference
      
    
+
    
+
    
+
+
    File descriptor returned by PIO_openfile or PIO_createfile (see pio_types)  
+ More...
    
+
    
+Collaboration diagram for pio_types::file_desc_t:
    
+
    
+
    Collaboration graph
    
+
+
+
+
    [legend]
    
+
+
+
+
+
+
+
    
+Public Attributes
    
+integer(kind=c_int) fh
     
    
+type(iosystem_desc_t), pointer iosystem => null()
     
    
+
    Detailed Description
    
+
    File descriptor returned by PIO_openfile or PIO_createfile (see pio_types) 
    
+
    The documentation for this type was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpio__types_1_1file__desc__t__coll__graph.map b/docs/structpio__types_1_1file__desc__t__coll__graph.map
new file mode 100644
index 00000000000..512dc0eac60
--- /dev/null
+++ b/docs/structpio__types_1_1file__desc__t__coll__graph.map
@@ -0,0 +1,3 @@
+
+
+
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new file mode 100644
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+
+
+
+
+
+
+PIO: Member List
+
+
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+
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+
+
+
+
    
+
    
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+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+
    pio_types::io_desc_t Member List
      
    
+
    
+
    
+
+
    This is the complete list of members for pio_types::io_desc_t, including all inherited members.
    
+
+  
+
    ioid (defined in pio_types::io_desc_t)pio_types::io_desc_t
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpio__types_1_1io__desc__t.html b/docs/structpio__types_1_1io__desc__t.html
new file mode 100644
index 00000000000..2b34cedd796
--- /dev/null
+++ b/docs/structpio__types_1_1io__desc__t.html
@@ -0,0 +1,97 @@
+
+
+
+
+
+
+
+PIO: pio_types::io_desc_t Type Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+List of all members |
+Public Attributes  
    
+  
    
+
    pio_types::io_desc_t Type Reference
      
    
+
    
+
    
+
+
    An io descriptor handle that is generated in PIO_initdecomp (see pio_types)  
+ More...
    
+
+
+
+
+
    
+Public Attributes
    
+integer(i4) ioid
     
    
+
    Detailed Description
    
+
    An io descriptor handle that is generated in PIO_initdecomp (see pio_types) 
    
+
    The documentation for this type was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpio__types_1_1iosystem__desc__t-members.html b/docs/structpio__types_1_1iosystem__desc__t-members.html
new file mode 100644
index 00000000000..2f67eac2a19
--- /dev/null
+++ b/docs/structpio__types_1_1iosystem__desc__t-members.html
@@ -0,0 +1,83 @@
+
+
+
+
+
+
+
+PIO: Member List
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+
    pio_types::iosystem_desc_t Member List
      
    
+
    
+
    
+
+
    This is the complete list of members for pio_types::iosystem_desc_t, including all inherited members.
    
+
+  
+
    iosysid (defined in pio_types::iosystem_desc_t)pio_types::iosystem_desc_t
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpio__types_1_1iosystem__desc__t.html b/docs/structpio__types_1_1iosystem__desc__t.html
new file mode 100644
index 00000000000..aa7d228d691
--- /dev/null
+++ b/docs/structpio__types_1_1iosystem__desc__t.html
@@ -0,0 +1,97 @@
+
+
+
+
+
+
+
+PIO: pio_types::iosystem_desc_t Type Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+List of all members |
+Public Attributes  
    
+  
    
+
    pio_types::iosystem_desc_t Type Reference
      
    
+
    
+
    
+
+
    A defined PIO system descriptor created by PIO_init (see pio_types)  
+ More...
    
+
+
+
+
+
    
+Public Attributes
    
+integer(kind=c_int) iosysid = -1
     
    
+
    Detailed Description
    
+
    A defined PIO system descriptor created by PIO_init (see pio_types) 
    
+
    The documentation for this type was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpio__types_1_1pio__rearr__comm__fc__opt__t-members.html b/docs/structpio__types_1_1pio__rearr__comm__fc__opt__t-members.html
new file mode 100644
index 00000000000..3a99213c4aa
--- /dev/null
+++ b/docs/structpio__types_1_1pio__rearr__comm__fc__opt__t-members.html
@@ -0,0 +1,85 @@
+
+
+
+
+
+
+
+PIO: Member List
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
+
    
+
    
+  
    
+
    pio_types::pio_rearr_comm_fc_opt_t Member List
      
    
+
    
+
    
+
+
    This is the complete list of members for pio_types::pio_rearr_comm_fc_opt_t, including all inherited members.
    
+
+  
+  
+  
+
    enable_hs (defined in pio_types::pio_rearr_comm_fc_opt_t)pio_types::pio_rearr_comm_fc_opt_t
    enable_isend (defined in pio_types::pio_rearr_comm_fc_opt_t)pio_types::pio_rearr_comm_fc_opt_t
    max_pend_req (defined in pio_types::pio_rearr_comm_fc_opt_t)pio_types::pio_rearr_comm_fc_opt_t
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpio__types_1_1pio__rearr__comm__fc__opt__t.html b/docs/structpio__types_1_1pio__rearr__comm__fc__opt__t.html
new file mode 100644
index 00000000000..0a447fe3653
--- /dev/null
+++ b/docs/structpio__types_1_1pio__rearr__comm__fc__opt__t.html
@@ -0,0 +1,98 @@
+
+
+
+
+
+
+
+PIO: pio_types::pio_rearr_comm_fc_opt_t Type Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
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+
    
+  
    
+List of all members |
+Public Attributes  
    
+  
    
+
    pio_types::pio_rearr_comm_fc_opt_t Type Reference
      
    
+
    
+
    
+
+
+
+
+
+
+
+
+
    
+Public Attributes
    
+logical(c_bool) enable_hs
     
    
+logical(c_bool) enable_isend
     
    
+integer(c_int) max_pend_req
     
    
+
    The documentation for this type was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpio__types_1_1pio__rearr__opt__t-members.html b/docs/structpio__types_1_1pio__rearr__opt__t-members.html
new file mode 100644
index 00000000000..070ab534771
--- /dev/null
+++ b/docs/structpio__types_1_1pio__rearr__opt__t-members.html
@@ -0,0 +1,86 @@
+
+
+
+
+
+
+
+PIO: Member List
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
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+
    
+
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+
    
+
    
+  
    
+
    pio_types::pio_rearr_opt_t Member List
      
    
+
    
+
    
+
+
    This is the complete list of members for pio_types::pio_rearr_opt_t, including all inherited members.
    
+
+  
+  
+  
+  
+
    comm_fc_opts_comp2io (defined in pio_types::pio_rearr_opt_t)pio_types::pio_rearr_opt_t
    comm_fc_opts_io2comp (defined in pio_types::pio_rearr_opt_t)pio_types::pio_rearr_opt_t
    comm_type (defined in pio_types::pio_rearr_opt_t)pio_types::pio_rearr_opt_t
    fcd (defined in pio_types::pio_rearr_opt_t)pio_types::pio_rearr_opt_t
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpio__types_1_1pio__rearr__opt__t.html b/docs/structpio__types_1_1pio__rearr__opt__t.html
new file mode 100644
index 00000000000..96397c10728
--- /dev/null
+++ b/docs/structpio__types_1_1pio__rearr__opt__t.html
@@ -0,0 +1,109 @@
+
+
+
+
+
+
+
+PIO: pio_types::pio_rearr_opt_t Type Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
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+
    
+  
    
+List of all members |
+Public Attributes  
    
+  
    
+
    pio_types::pio_rearr_opt_t Type Reference
      
    
+
    
+
    
+
    
+Collaboration diagram for pio_types::pio_rearr_opt_t:
    
+
    
+
    Collaboration graph
    
+
+
+
+
    [legend]
    
+
+
+
+
+
+
+
+
+
+
+
    
+Public Attributes
    
+integer(c_int) comm_type
     
    
+integer(c_int) fcd
     
    
+type(pio_rearr_comm_fc_opt_t) comm_fc_opts_comp2io
     
    
+type(pio_rearr_comm_fc_opt_t) comm_fc_opts_io2comp
     
    
+
    The documentation for this type was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpio__types_1_1pio__rearr__opt__t__coll__graph.map b/docs/structpio__types_1_1pio__rearr__opt__t__coll__graph.map
new file mode 100644
index 00000000000..6015937c004
--- /dev/null
+++ b/docs/structpio__types_1_1pio__rearr__opt__t__coll__graph.map
@@ -0,0 +1,3 @@
+
+
+
diff --git a/docs/structpio__types_1_1pio__rearr__opt__t__coll__graph.md5 b/docs/structpio__types_1_1pio__rearr__opt__t__coll__graph.md5
new file mode 100644
index 00000000000..582f43b476b
--- /dev/null
+++ b/docs/structpio__types_1_1pio__rearr__opt__t__coll__graph.md5
@@ -0,0 +1 @@
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+
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+
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+PIO: Member List
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+
    
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+ 
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+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
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+
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+
    
+  
    
+
    pio_types::var_desc_t Member List
      
    
+
    
+
    
+
+
    This is the complete list of members for pio_types::var_desc_t, including all inherited members.
    
+
+  
+  
+
    ncid (defined in pio_types::var_desc_t)pio_types::var_desc_t
    varid (defined in pio_types::var_desc_t)pio_types::var_desc_t
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpio__types_1_1var__desc__t.html b/docs/structpio__types_1_1var__desc__t.html
new file mode 100644
index 00000000000..b21d4cfe08b
--- /dev/null
+++ b/docs/structpio__types_1_1var__desc__t.html
@@ -0,0 +1,100 @@
+
+
+
+
+
+
+
+PIO: pio_types::var_desc_t Type Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
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+
    
+
    
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+  
    
+List of all members |
+Public Attributes  
    
+  
    
+
    pio_types::var_desc_t Type Reference
      
    
+
    
+
    
+
+
    A variable descriptor returned from PIO_def_var (see pio_types)  
+ More...
    
+
+
+
+
+
+
+
    
+Public Attributes
    
+integer(i4) varid
     
    
+integer(i4) ncid
     
    
+
    Detailed Description
    
+
    A variable descriptor returned from PIO_def_var (see pio_types) 
    
+
    The documentation for this type was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpioexample_1_1pioexampleclass-members.html b/docs/structpioexample_1_1pioexampleclass-members.html
new file mode 100644
index 00000000000..271f38c5ade
--- /dev/null
+++ b/docs/structpioexample_1_1pioexampleclass-members.html
@@ -0,0 +1,110 @@
+
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+PIO: Member List
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+ 
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+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
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+
    pioexample::pioexampleclass Member List
      
    
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    This is the complete list of members for pioexample::pioexampleclass, including all inherited members.
    
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+  
+  
+  
+  
+  
+  
+  
+  
+  
+  
+  
+  
+  
+  
+  
+  
+  
+
    arridxperpepioexample::pioexampleclass
    cleanuppioexample::pioexampleclass
    closefilepioexample::pioexampleclass
    compdofpioexample::pioexampleclass
    createdecomppioexample::pioexampleclass
    createfilepioexample::pioexampleclass
    databufferpioexample::pioexampleclass
    definevarpioexample::pioexampleclass
    dimlenpioexample::pioexampleclass
    filenamepioexample::pioexampleclass
    initpioexample::pioexampleclass
    iodescncellspioexample::pioexampleclass
    iotypepioexample::pioexampleclass
    istapioexample::pioexampleclass
    istopioexample::pioexampleclass
    myrankpioexample::pioexampleclass
    niotaskspioexample::pioexampleclass
    ntaskspioexample::pioexampleclass
    numaggregatorpioexample::pioexampleclass
    optbasepioexample::pioexampleclass
    piodimidpioexample::pioexampleclass
    piofiledescpioexample::pioexampleclass
    pioiosystempioexample::pioexampleclass
    piovarpioexample::pioexampleclass
    readbufferpioexample::pioexampleclass
    readvarpioexample::pioexampleclass
    stridepioexample::pioexampleclass
    writevarpioexample::pioexampleclass
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpioexample_1_1pioexampleclass.html b/docs/structpioexample_1_1pioexampleclass.html
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+
+PIO: pioexample::pioexampleclass Type Reference
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+   
    PIO
+    2.4.0
+   
    
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+  
    
+List of all members |
+Public Member Functions |
+Public Attributes  
    
+  
    
+
    pioexample::pioexampleclass Type Reference
      
    
+
    
+
    
+
+
    A class to hold example code and data.  
+ More...
    
+
    
+Collaboration diagram for pioexample::pioexampleclass:
    
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    Collaboration graph
    
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+Public Member Functions
    procedure, public init
     Initialize MPI, ParallelIO, and example data.  More...
     
    procedure, public createdecomp
     Create the decomposition for the example.  More...
     
    procedure, public createfile
     Create netCDF output file.  More...
     
    procedure, public definevar
     Define the netCDF metadata.  More...
     
    procedure, public writevar
     Write the sample data to the output file.  More...
     
    procedure, public readvar
     Read the sample data from the output file.  More...
     
    procedure, public closefile
     Close the netCDF output file.  More...
     
    procedure, public cleanup
     Clean up resources.  More...
     
    
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+Public Attributes
    integer myrank
     Rank of processor running the code.  More...
     
    integer ntasks
     Number of processors participating in MPI communicator.  More...
     
    integer niotasks
     Number of processors performing I/O.  More...
     
    integer stride
     Stride in the mpi rank between io tasks.  More...
     
    integer numaggregator
     Number of aggregator.  More...
     
    integer optbase
     Start index of I/O processors.  More...
     
    type(iosystem_desc_t) pioiosystem
     The ParallelIO system set up by PIO_init.  More...
     
    type(file_desc_t) piofiledesc
     Contains data identifying the file.  More...
     
    type(var_desc_t) piovar
     The netCDF variable ID.  More...
     
    type(io_desc_t) iodescncells
     An io descriptor handle that is generated in PIO_initdecomp.  More...
     
    integer iotype
     Specifies the flavor of netCDF output.  More...
     
    integer piodimid
     The netCDF dimension ID.  More...
     
    integer ista
     1-based index of start of this processors data in full data array.  More...
     
    integer isto
     Size of data array for this processor.  More...
     
    integer arridxperpe
     Number of elements handled by each processor.  More...
     
    integer, dimension(1) dimlen
     The length of the dimension of the netCDF variable.  More...
     
    integer, dimension(:), allocatable databuffer
     Buffer to hold sample data that is written to netCDF file.  More...
     
    integer, dimension(:), allocatable readbuffer
     Buffer to read data into.  More...
     
    integer, dimension(:), allocatable compdof
     Array describing the decomposition of the data.  More...
     
    character(len=255) filename
     Name of the sample netCDF file written by this example.  More...
     
    
+
    Detailed Description
    
+
    A class to hold example code and data. 
    
+
    This class contains the data and functions to execute the example. 
    
+
    Member Function/Subroutine Documentation
    
+
+
    ◆ cleanup()
    
+
+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+      
    procedure, public pioexample::pioexampleclass::cleanup ()
    
+
    
+
+
    Clean up resources. 
    
+
    This subroutine cleans up resources used in the example. The ParallelIO and MPI libraries are finalized, and memory allocated in this example program is freed. 
    
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+
    
+
    
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    ◆ closefile()
    
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+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+      
    procedure, public pioexample::pioexampleclass::closefile ()
    
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+
    Close the netCDF output file. 
    
+
    This subroutine closes the output file used by this example. 
    
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+
    
+
    
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    ◆ createdecomp()
    
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+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+      
    procedure, public pioexample::pioexampleclass::createdecomp ()
    
+
    
+
+
    Create the decomposition for the example. 
    
+
    This subroutine creates the decomposition for the example. 
    
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+
    
+
    
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    ◆ createfile()
    
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+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+      
    procedure, public pioexample::pioexampleclass::createfile ()
    
+
    
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+
    Create netCDF output file. 
    
+
    This subroutine creates the netCDF output file for the example. 
    
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+
    
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    ◆ definevar()
    
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+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+      
    procedure, public pioexample::pioexampleclass::definevar ()
    
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    Define the netCDF metadata. 
    
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    This subroutine defines the netCDF dimension and variable used in the output file. 
    
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    ◆ init()
    
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+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+      
    procedure, public pioexample::pioexampleclass::init ()
    
+
    
+
+
    Initialize MPI, ParallelIO, and example data. 
    
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    Initialize the MPI and ParallelIO libraries. Also allocate memory to write and read the sample data to the netCDF file. 
    
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+
    
+
    
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    ◆ readvar()
    
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+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+      
    procedure, public pioexample::pioexampleclass::readvar ()
    
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    Read the sample data from the output file. 
    
+
    This subroutine reads the sample data array from the netCDF output file. 
    
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+
    
+
    
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    ◆ writevar()
    
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+
    
+
    
+      
+        
+          
+          
+          
+          
+        
+      
    procedure, public pioexample::pioexampleclass::writevar ()
    
+
    
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+
    Write the sample data to the output file. 
    
+
    This subroutine writes the sample data array to the netCDF output file. 
    
+
+
    
+
    
+
    Member Data Documentation
    
+
+
    ◆ arridxperpe
    
+
+
    
+
    
+      
+        
+          
+        
+      
    integer pioexample::pioexampleclass::arridxperpe
    
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+
    Number of elements handled by each processor. 
    
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+
    
+
    
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+
    ◆ compdof
    
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+
    
+
    
+      
+        
+          
+        
+      
    integer, dimension(:), allocatable pioexample::pioexampleclass::compdof
    
+
    
+
+
    Array describing the decomposition of the data. 
    
+
+
    
+
    
+
+
    ◆ databuffer
    
+
+
    
+
    
+      
+        
+          
+        
+      
    integer, dimension(:), allocatable pioexample::pioexampleclass::databuffer
    
+
    
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+
    Buffer to hold sample data that is written to netCDF file. 
    
+
+
    
+
    
+
+
    ◆ dimlen
    
+
+
    
+
    
+      
+        
+          
+        
+      
    integer, dimension(1) pioexample::pioexampleclass::dimlen
    
+
    
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+
    The length of the dimension of the netCDF variable. 
    
+
+
    
+
    
+
+
    ◆ filename
    
+
+
    
+
    
+      
+        
+          
+        
+      
    character(len=255) pioexample::pioexampleclass::filename
    
+
    
+
+
    Name of the sample netCDF file written by this example. 
    
+
+
    
+
    
+
+
    ◆ iodescncells
    
+
+
    
+
    
+      
+        
+          
+        
+      
    type(io_desc_t) pioexample::pioexampleclass::iodescncells
    
+
    
+
+
    An io descriptor handle that is generated in PIO_initdecomp. 
    
+
+
    
+
    
+
+
    ◆ iotype
    
+
+
    
+
    
+      
+        
+          
+        
+      
    integer pioexample::pioexampleclass::iotype
    
+
    
+
+
    Specifies the flavor of netCDF output. 
    
+
+
    
+
    
+
+
    ◆ ista
    
+
+
    
+
    
+      
+        
+          
+        
+      
    integer pioexample::pioexampleclass::ista
    
+
    
+
+
    1-based index of start of this processors data in full data array. 
    
+
+
    
+
    
+
+
    ◆ isto
    
+
+
    
+
    
+      
+        
+          
+        
+      
    integer pioexample::pioexampleclass::isto
    
+
    
+
+
    Size of data array for this processor. 
    
+
+
    
+
    
+
+
    ◆ myrank
    
+
+
    
+
    
+      
+        
+          
+        
+      
    integer pioexample::pioexampleclass::myrank
    
+
    
+
+
    Rank of processor running the code. 
    
+
+
    
+
    
+
+
    ◆ niotasks
    
+
+
    
+
    
+      
+        
+          
+        
+      
    integer pioexample::pioexampleclass::niotasks
    
+
    
+
+
    Number of processors performing I/O. 
    
+
+
    
+
    
+
+
    ◆ ntasks
    
+
+
    
+
    
+      
+        
+          
+        
+      
    integer pioexample::pioexampleclass::ntasks
    
+
    
+
+
    Number of processors participating in MPI communicator. 
    
+
+
    
+
    
+
+
    ◆ numaggregator
    
+
+
    
+
    
+      
+        
+          
+        
+      
    integer pioexample::pioexampleclass::numaggregator
    
+
    
+
+
    Number of aggregator. 
    
+
+
    
+
    
+
+
    ◆ optbase
    
+
+
    
+
    
+      
+        
+          
+        
+      
    integer pioexample::pioexampleclass::optbase
    
+
    
+
+
    Start index of I/O processors. 
    
+
+
    
+
    
+
+
    ◆ piodimid
    
+
+
    
+
    
+      
+        
+          
+        
+      
    integer pioexample::pioexampleclass::piodimid
    
+
    
+
+
    The netCDF dimension ID. 
    
+
+
    
+
    
+
+
    ◆ piofiledesc
    
+
+
    
+
    
+      
+        
+          
+        
+      
    type(file_desc_t) pioexample::pioexampleclass::piofiledesc
    
+
    
+
+
    Contains data identifying the file. 
    
+
+
    
+
    
+
+
    ◆ pioiosystem
    
+
+
    
+
    
+      
+        
+          
+        
+      
    type(iosystem_desc_t) pioexample::pioexampleclass::pioiosystem
    
+
    
+
+
    The ParallelIO system set up by PIO_init. 
    
+
+
    
+
    
+
+
    ◆ piovar
    
+
+
    
+
    
+      
+        
+          
+        
+      
    type(var_desc_t) pioexample::pioexampleclass::piovar
    
+
    
+
+
    The netCDF variable ID. 
    
+
+
    
+
    
+
+
    ◆ readbuffer
    
+
+
    
+
    
+      
+        
+          
+        
+      
    integer, dimension(:), allocatable pioexample::pioexampleclass::readbuffer
    
+
    
+
+
    Buffer to read data into. 
    
+
+
    
+
    
+
+
    ◆ stride
    
+
+
    
+
    
+      
+        
+          
+        
+      
    integer pioexample::pioexampleclass::stride
    
+
    
+
+
    Stride in the mpi rank between io tasks. 
    
+
+
    
+
    
+
    The documentation for this type was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structpioexample_1_1pioexampleclass__coll__graph.map b/docs/structpioexample_1_1pioexampleclass__coll__graph.map
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+
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+PIO: Member List
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+
    
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+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
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+
    
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+
    
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+  
    
+
    rearr_comm_fc_opt Member List
      
    
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+
    
+
+
    This is the complete list of members for rearr_comm_fc_opt, including all inherited members.
    
+
+  
+  
+  
+
    hsrearr_comm_fc_opt
    isendrearr_comm_fc_opt
    max_pend_reqrearr_comm_fc_opt
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structrearr__comm__fc__opt.html b/docs/structrearr__comm__fc__opt.html
new file mode 100644
index 00000000000..cd06ad78ea2
--- /dev/null
+++ b/docs/structrearr__comm__fc__opt.html
@@ -0,0 +1,121 @@
+
+
+
+
+
+
+
+PIO: rearr_comm_fc_opt Struct Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
    
+
    
+  
    
+List of all members |
+Public Attributes  
    
+  
    
+
    rearr_comm_fc_opt Struct Reference
      
    
+
    
+
    
+
+
    Rearranger comm flow control options.  
+ More...
    
+
+
    #include <pio.h>
    
+
+
+
+
+
+
+
+
+
+
+
+
    
+Public Attributes
    
+bool hs
     Enable handshake. 
     
    
+bool isend
     Enable isends - if false use blocking sends. 
     
    int max_pend_req
     Max pending requests (PIO_REARR_COMM_UNLIMITED_PEND_REQ => unlimited pend req).  More...
     
    
+
    Detailed Description
    
+
    Rearranger comm flow control options. 
    
+
    Member Data Documentation
    
+
+
    ◆ max_pend_req
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int rearr_comm_fc_opt::max_pend_req
    
+
    
+
+
    Max pending requests (PIO_REARR_COMM_UNLIMITED_PEND_REQ => unlimited pend req). 
    
+
    This is the number of messages allowed to be in flight at one time. On some systems posting all messages at once creates a significant bottleneck in communications and throttling in this manner improves overall performance. 
    
+
+
    
+
    
+
    The documentation for this struct was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structrearr__opt-members.html b/docs/structrearr__opt-members.html
new file mode 100644
index 00000000000..3af4b32be2f
--- /dev/null
+++ b/docs/structrearr__opt-members.html
@@ -0,0 +1,82 @@
+
+
+
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+
+
+PIO: Member List
+
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+
+
    
+
    
+
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+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
    
+
    
+  
    
+
    rearr_opt Member List
      
    
+
    
+
    
+
+
    This is the complete list of members for rearr_opt, including all inherited members.
    
+
+  
+  
+  
+  
+
    comm_typerearr_opt
    comp2iorearr_opt
    fcdrearr_opt
    io2comprearr_opt
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structrearr__opt.html b/docs/structrearr__opt.html
new file mode 100644
index 00000000000..1d8e4685c6f
--- /dev/null
+++ b/docs/structrearr__opt.html
@@ -0,0 +1,116 @@
+
+
+
+
+
+
+
+PIO: rearr_opt Struct Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
    
+
    
+  
    
+List of all members |
+Public Attributes  
    
+  
    
+
    rearr_opt Struct Reference
      
    
+
    
+
    
+
+
    Rearranger options.  
+ More...
    
+
+
    #include <pio.h>
    
+
    
+Collaboration diagram for rearr_opt:
    
+
    
+
    Collaboration graph
    
+
+
+
+
    [legend]
    
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
    
+Public Attributes
    
+int comm_type
     Comm type - see PIO_REARR_COMM_TYPE. 
     
    
+int fcd
     Comm flow control dir - see PIO_REARR_COMM_FC_DIR. 
     
    
+rearr_comm_fc_opt_t comp2io
     flow control opts, comp to io procs 
     
    
+rearr_comm_fc_opt_t io2comp
     flow control opts, io to comp procs 
     
    
+
    Detailed Description
    
+
    Rearranger options. 
    
+
    The documentation for this struct was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structrearr__opt__coll__graph.map b/docs/structrearr__opt__coll__graph.map
new file mode 100644
index 00000000000..c422d96d95c
--- /dev/null
+++ b/docs/structrearr__opt__coll__graph.map
@@ -0,0 +1,3 @@
+
+
+
diff --git a/docs/structrearr__opt__coll__graph.md5 b/docs/structrearr__opt__coll__graph.md5
new file mode 100644
index 00000000000..1e73f5296b3
--- /dev/null
+++ b/docs/structrearr__opt__coll__graph.md5
@@ -0,0 +1 @@
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+
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+PIO: Member List
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+
    
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+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
    
+
    
+  
    
+
    var_desc_t Member List
      
    
+
    
+
    
+
+
    This is the complete list of members for var_desc_t, including all inherited members.
    
+
+  
+  
+  
+  
+  
+  
+  
+  
+  
+  
+  
+  
+  
+
    fillbufvar_desc_t
    fillvalue (defined in var_desc_t)var_desc_t
    mpi_typevar_desc_t
    mpi_type_sizevar_desc_t
    nextvar_desc_t
    nreqsvar_desc_t
    pio_typevar_desc_t
    pio_type_sizevar_desc_t
    rec_var (defined in var_desc_t)var_desc_t
    recordvar_desc_t
    requestvar_desc_t
    use_fillvar_desc_t
    varid (defined in var_desc_t)var_desc_t
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structvar__desc__t.html b/docs/structvar__desc__t.html
new file mode 100644
index 00000000000..053bf64bf08
--- /dev/null
+++ b/docs/structvar__desc__t.html
@@ -0,0 +1,300 @@
+
+
+
+
+
+
+
+PIO: var_desc_t Struct Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
    
+
    
+  
    
+List of all members |
+Public Attributes  
    
+  
    
+
    var_desc_t Struct Reference
      
    
+
    
+
    
+
+
    Variable description structure.  
+ More...
    
+
+
    #include <pio.h>
    
+
    
+Collaboration diagram for var_desc_t:
    
+
    
+
    Collaboration graph
    
+
+
+
    [legend]
    
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
    
+Public Attributes
    
+int varid
     
    
+int rec_var
     
    int record
     The record number to be written.  More...
     
    int * request
     ID of each outstanding pnetcdf request for this variable.  More...
     
    int nreqs
     Number of requests pending with pnetcdf.  More...
     
    
+void * fillvalue
     
    int use_fill
     Non-zero if fill mode is turned on for this var.  More...
     
    void * fillbuf
     Buffer that contains the holegrid fill values used to fill in missing sections of data when using the subset rearranger.  More...
     
    int pio_type
     The PIO data type.  More...
     
    int pio_type_size
     The size, in bytes, of the PIO data type.  More...
     
    MPI_Datatype mpi_type
     The MPI type of the data.  More...
     
    int mpi_type_size
     The size in bytes of a datum of MPI type mpitype.  More...
     
    struct var_desc_t * next
     Pointer to next var in list.  More...
     
    
+
    Detailed Description
    
+
    Variable description structure. 
    
+
    Member Data Documentation
    
+
+
    ◆ fillbuf
    
+
+
    
+
    
+      
+        
+          
+        
+      
    void* var_desc_t::fillbuf
    
+
    
+
+
    Buffer that contains the holegrid fill values used to fill in missing sections of data when using the subset rearranger. 
    
+
+
    
+
    
+
+
    ◆ mpi_type
    
+
+
    
+
    
+      
+        
+          
+        
+      
    MPI_Datatype var_desc_t::mpi_type
    
+
    
+
+
    The MPI type of the data. 
    
+
+
    
+
    
+
+
    ◆ mpi_type_size
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int var_desc_t::mpi_type_size
    
+
    
+
+
    The size in bytes of a datum of MPI type mpitype. 
    
+
+
    
+
    
+
+
    ◆ next
    
+
+
    
+
    
+      
+        
+          
+        
+      
    struct var_desc_t* var_desc_t::next
    
+
    
+
+
    Pointer to next var in list. 
    
+
+
    
+
    
+
+
    ◆ nreqs
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int var_desc_t::nreqs
    
+
    
+
+
    Number of requests pending with pnetcdf. 
    
+
+
    
+
    
+
+
    ◆ pio_type
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int var_desc_t::pio_type
    
+
    
+
+
    The PIO data type. 
    
+
+
    
+
    
+
+
    ◆ pio_type_size
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int var_desc_t::pio_type_size
    
+
    
+
+
    The size, in bytes, of the PIO data type. 
    
+
+
    
+
    
+
+
    ◆ record
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int var_desc_t::record
    
+
    
+
+
    The record number to be written. 
    
+
    Ignored if there is no unlimited dimension. 
    
+
+
    
+
    
+
+
    ◆ request
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int* var_desc_t::request
    
+
    
+
+
    ID of each outstanding pnetcdf request for this variable. 
    
+
+
    
+
    
+
+
    ◆ use_fill
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int var_desc_t::use_fill
    
+
    
+
+
    Non-zero if fill mode is turned on for this var. 
    
+
+
    
+
    
+
    The documentation for this struct was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structvar__desc__t__coll__graph.map b/docs/structvar__desc__t__coll__graph.map
new file mode 100644
index 00000000000..7c9af91f7f7
--- /dev/null
+++ b/docs/structvar__desc__t__coll__graph.map
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diff --git a/docs/structwmulti__buffer-members.html b/docs/structwmulti__buffer-members.html
new file mode 100644
index 00000000000..660c59116c7
--- /dev/null
+++ b/docs/structwmulti__buffer-members.html
@@ -0,0 +1,87 @@
+
+
+
+
+
+
+
+PIO: Member List
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
    
+
    
+  
    
+
    wmulti_buffer Member List
      
    
+
    
+
    
+
+
    This is the complete list of members for wmulti_buffer, including all inherited members.
    
+
+  
+  
+  
+  
+  
+  
+  
+  
+  
+
    arraylenwmulti_buffer
    datawmulti_buffer
    fillvaluewmulti_buffer
    framewmulti_buffer
    ioidwmulti_buffer
    nextwmulti_buffer
    num_arrayswmulti_buffer
    recordvarwmulti_buffer
    vidwmulti_buffer
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/structwmulti__buffer.html b/docs/structwmulti__buffer.html
new file mode 100644
index 00000000000..aaa0d5a3aef
--- /dev/null
+++ b/docs/structwmulti__buffer.html
@@ -0,0 +1,275 @@
+
+
+
+
+
+
+
+PIO: wmulti_buffer Struct Reference
+
+
+
+
+
+
+
+
+
+
+
    
+
    
+
+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
+
+
+
+
+
+
+
+
    
+
    
+
+
+
    
+
+
    
+
+
    
+
    
+  
    
+List of all members |
+Public Attributes  
    
+  
    
+
    wmulti_buffer Struct Reference
      
    
+
    
+
    
+
+
    The multi buffer holds data from one or more variables.  
+ More...
    
+
+
    #include <pio.h>
    
+
    
+Collaboration diagram for wmulti_buffer:
    
+
    
+
    Collaboration graph
    
+
+
+
    [legend]
    
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
    
+Public Attributes
    int ioid
     The ID that describes the decomposition, as returned from PIOc_Init_Decomp().  More...
     
    int recordvar
     Non-zero if this is a buffer for a record var.  More...
     
    int num_arrays
     Number of arrays of data in the multibuffer.  More...
     
    int arraylen
     Size of this variables data on local task.  More...
     
    int * vid
     Array of varids.  More...
     
    int * frame
     An array of current record numbers, for record vars.  More...
     
    void * fillvalue
     Array of fill values used for each var.  More...
     
    void * data
     Pointer to the data.  More...
     
    struct wmulti_buffer * next
     Pointer to the next multi-buffer in the list.  More...
     
    
+
    Detailed Description
    
+
    The multi buffer holds data from one or more variables. 
    
+
    Data are accumulated in the multi-buffer. 
    
+
    Member Data Documentation
    
+
+
    ◆ arraylen
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int wmulti_buffer::arraylen
    
+
    
+
+
    Size of this variables data on local task. 
    
+
    All vars in the multi-buffer have the same size. 
    
+
+
    
+
    
+
+
    ◆ data
    
+
+
    
+
    
+      
+        
+          
+        
+      
    void* wmulti_buffer::data
    
+
    
+
+
    Pointer to the data. 
    
+
+
    
+
    
+
+
    ◆ fillvalue
    
+
+
    
+
    
+      
+        
+          
+        
+      
    void* wmulti_buffer::fillvalue
    
+
    
+
+
    Array of fill values used for each var. 
    
+
+
    
+
    
+
+
    ◆ frame
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int* wmulti_buffer::frame
    
+
    
+
+
    An array of current record numbers, for record vars. 
    
+
    One element per variable. 
    
+
+
    
+
    
+
+
    ◆ ioid
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int wmulti_buffer::ioid
    
+
    
+
+
    The ID that describes the decomposition, as returned from PIOc_Init_Decomp(). 
    
+
+
    
+
    
+
+
    ◆ next
    
+
+
    
+
    
+      
+        
+          
+        
+      
    struct wmulti_buffer* wmulti_buffer::next
    
+
    
+
+
    Pointer to the next multi-buffer in the list. 
    
+
+
    
+
    
+
+
    ◆ num_arrays
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int wmulti_buffer::num_arrays
    
+
    
+
+
    Number of arrays of data in the multibuffer. 
    
+
    Each array had data for one var or record. When multibuffer is flushed, all arrays are written and num_arrays returns to zero. 
    
+
+
    
+
    
+
+
    ◆ recordvar
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int wmulti_buffer::recordvar
    
+
    
+
+
    Non-zero if this is a buffer for a record var. 
    
+
+
    
+
    
+
+
    ◆ vid
    
+
+
    
+
    
+      
+        
+          
+        
+      
    int* wmulti_buffer::vid
    
+
    
+
+
    Array of varids. 
    
+
+
    
+
    
+
    The documentation for this struct was generated from the following file:
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
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diff --git a/docs/test.html b/docs/test.html
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+
+PIO: Testing
+
+
+
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+
    
+
    
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+ 
+ 
+  
+ 
+ 
+
    
+   
    PIO
+    2.4.0
+   
    
+  
    
+
    
+
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+
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+
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+
    
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+
    
+  
    
+
    Testing 
      
    
+
    
+
    
+
    Building PIO2 Tests
    
+
    To build both the Unit and Performance tests for PIO2, follow the general instructions for building PIO2 in either the Installation page or the Machine Walk-Through page. During the Build step after (or instead of) the make command, type make tests.
    
+
    PIO2 Unit Tests
    
+
    The Parallel IO library comes with more than 20 built-in unit tests to verify that the library is installed and working correctly. These tests utilize the CMake and CTest automation framework. Because the Parallel IO library is built for parallel applications, the unit tests should be run in a parallel environment. The simplest way to do this is to submit a PBS job to run the ctest command.
    
+
    For a library built into the example directory /scratch/user/PIO_build/, an example PBS script would be: 
      #!/bin/bash
+
+  #PBS -q normal
+  #PBS -l nodes=1:ppn=4
+  #PBS -N piotests
+  #PBS -e piotests.e$PBS_JOBID
+  #PBS -o piotests.o$PBS_JOBID
+
+  cd /scratch/user/PIO_build
+  ctest
+
    The output from the unit tests will be reported in the piotests.o$JOBID file. This should look something like:
    
+
    Test project /scratch/cluster/katec/PIO_build
          Start  1: test_names
     1/24 Test  #1: test_names .......................   Passed    0.60 sec
          Start  2: test_nc4
     2/24 Test  #2: test_nc4 .........................   Passed    0.53 sec
          Start  3: pio_unit_test
     3/24 Test  #3: pio_unit_test ....................   Passed    0.45 sec
          Start  4: init_finialize_1_proc
     4/24 Test  #4: init_finialize_1_proc ............   Passed    0.54 sec
          Start  5: init_finialize_2_proc
     5/24 Test  #5: init_finialize_2_proc ............   Passed    0.53 sec
          Start  6: init_finalize_2_proc_with_args
     6/24 Test  #6: init_finalize_2_proc_with_args ...   Passed    0.55 sec
          Start  7: pio_file_simple_tests
     7/24 Test  #7: pio_file_simple_tests ............   Passed    0.58 sec
          Start  8: pio_file_fail
     8/24 Test  #8: pio_file_fail ....................   Passed    0.62 sec
          Start  9: ncdf_simple_tests
     9/24 Test  #9: ncdf_simple_tests ................   Passed    0.60 sec
          Start 10: ncdf_get_put_1proc
    10/24 Test #10: ncdf_get_put_1proc ...............   Passed    0.65 sec
          Start 11: ncdf_get_put_2proc
    11/24 Test #11: ncdf_get_put_2proc ...............   Passed    0.63 sec
          Start 12: ncdf_fail
    12/24 Test #12: ncdf_fail ........................   Passed    0.52 sec
          Start 13: pio_decomp_tests_1p
    13/24 Test #13: pio_decomp_tests_1p ..............   Passed    1.54 sec
          Start 14: pio_decomp_tests_2p
    14/24 Test #14: pio_decomp_tests_2p ..............   Passed    1.99 sec
          Start 15: pio_decomp_tests_3p
    15/24 Test #15: pio_decomp_tests_3p ..............   Passed    2.11 sec
          Start 16: pio_decomp_tests_4p_1agg
    16/24 Test #16: pio_decomp_tests_4p_1agg .........   Passed    2.12 sec
          Start 17: pio_decomp_tests_4p_2agg
    17/24 Test #17: pio_decomp_tests_4p_2agg .........   Passed    2.08 sec
          Start 18: pio_decomp_tests_4p_3agg
    18/24 Test #18: pio_decomp_tests_4p_3agg .........   Passed    2.08 sec
          Start 19: pio_decomp_tests_4p_1iop
    19/24 Test #19: pio_decomp_tests_4p_1iop .........   Passed    1.91 sec
          Start 20: pio_decomp_tests_4p_2iop
    20/24 Test #20: pio_decomp_tests_4p_2iop .........   Passed    2.50 sec
          Start 21: pio_decomp_tests_4p_3iop
    21/24 Test #21: pio_decomp_tests_4p_3iop .........   Passed    2.20 sec
          Start 22: pio_decomp_tests_4p_2iop_2str
    22/24 Test #22: pio_decomp_tests_4p_2iop_2str ....   Passed    2.16 sec
          Start 23: pio_decomp_tests_4p_2iop_1agg
    23/24 Test #23: pio_decomp_tests_4p_2iop_1agg ....   Passed    2.20 sec
          Start 24: pio_decomp_fillval2
    24/24 Test #24: pio_decomp_fillval2 ..............   Passed    0.60 sec
    100% tests passed, 0 tests failed out of 24
    Total Test time (real) =  30.80 sec
    Another option would be to launch an interactive session, change into the build directory, and run the ctest command.
    
+
    On Yellowstone, the unit tests can run using the execca or execgy commands as: 
      > setenv DAV_CORES 4
+  > execca ctest
+
    PIO2 Performance Test
    
+
    To run the performance tests, you will need to add two files to the tests/performance subdirectory of the PIO build directory. First, you will need a decomp file. You can download one from our google code page here: https://svn-ccsm-piodecomps.cgd.ucar.edu/trunk/ . You can use any of these files, and save them to your home or base work directory. Secondly, you will need to add a namelist file, named "pioperf.nl". Save this file in the directory with your pioperf executable (this is found in the tests/performance subdirectory of the PIO build directory).
    
+
    The contents of the namelist file should look like: 
     &pioperf
+
+ decompfile = "/u/home/user/piodecomp30tasks01dims06.dat"
+
+ pio_typenames = 'pnetcdf'
+
+ niotasks = 30
+
+ rearrangers = 1
+
+ nvars = 2
+
+ /
+
    Here, the second line ("decompfile") points to the path for your decomp file (wherever you saved it). For the rest of the lines, each item added to the list adds another test to be run. For instance, to test all of the types of supported IO, your pio_typenames would look like: 
     pio_typenames = 'pnetcdf','netcdf','netcdf4p','netcdf4c'
+
    HDF5 is netcdf4p, and Parallel-Netcdf is pnetcdf.
    
+
    To test with different numbers of IO tasks, you could do: 
     niotasks = 30,15,5
+
    (These tasks are the subset of the run tasks that are designated IO tasks)
    
+
    To test with both of the rearranger algorithms: 
     rearrangers = 1,2
+
    (Each rearranger is a different algorithm for converting from data in memory to data in a file on disk. The first one, BOX, is the older method from PIO1, the second, SUBSET, is a newer method that seems to be more efficient in large numbers of tasks)
    
+
    To test with different numbers of variables: 
     nvars = 8,5,3,2
+
    (The more variables you use, the higher data throughput goes, usually)
    
+
    To run, submit a job with 'pioperf' as the executable, and at least as many tasks as you have specified in the decomposition file. On yellowstone, a submit script could look like: 
     #!/bin/tcsh
+
+ #BSUB -P P00000000 # project code
+ #BSUB -W 00:10 # wall-clock time (hrs:mins)
+ #BSUB -n 30 # number of tasks in job
+ #BSUB -R "span[ptile=16]" # run 16 MPI tasks per node
+ #BSUB -J pio_perftest # job name
+ #BSUB -o pio_perftest.%J.out # output file name in which %J is replaced by the job ID
+ #BSUB -e pio_perftest.%J.err # error file name in which %J is replaced by the job ID
+ #BSUB -q small # queue
+
+ #run the executable
+ mpirun.lsf /glade/p/work/katec/pio_work/pio_build/tests/performance/pioperf
+
    The result(s) will look like a line in the output file such as: 
    RESULT: write       BOX         4        30         2       16.9905924688
    You can decode this as:
      
+
    1. Read/write describes the io operation performed
      2. 
+
    2. BOX/SUBSET is the algorithm for the rearranger (as described above)
      3. 
+
    3. 4 [1-4] is the io library used for the operation. The options here are [1] Parallel-netcdf [2] NetCDF3 [3] NetCDF4-Compressed [4] NetCDF4-Parallel
      4. 
+
    4. 30 [any number] is the number of io-specific tasks used in the operation. Must be less than the number of MPI tasks used in the test.
      5. 
+
    5. 2 [any number] is the number of variables read or written during the operation
      6. 
+
    6. 16.9905924688 [any number] is the Data Rate of the operation in MB/s. This is the important value for determining performance of the system. The higher this numbre is, the better the PIO2 library is performing for the given operation.
      7. 
+
    
+
    Last updated: 05-17-2016 
    
+
    
+
+
    
+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
+
    
+
+
diff --git a/docs/testpio_example.html b/docs/testpio_example.html
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+PIO: testpio: a regression and benchmarking code
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+
    
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+  
    
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    testpio: a regression and benchmarking code 
      
    
+
    
+
    
+
    The testpio directory, included with the release package, tests both the accuracy and performance of reading and writing data using the pio library.
    
+
    The testpio directory contains 3 perl scripts that you can use to build and run the testpio.F90 code. 
      
+
    • 
+testpio_build.pl - builds the pio, timing and testpio libraries and executables 
      • 
+
    • 
+testpio_bench.pl - setups, builds and runs a user specified set of test suites using testpio and generates log files with benchmarking information.  
      • 
+
    • 
+testpio_run.pl - setups, builds and runs a user specified set of test suites using testpio.  
      • 
+
    
+
    Additional C shell scripts wrappers are packaged with the testpio suite to allow for environment customization of the 3 perl scripts listed above. The following help information describes in more detail how the testpio code works.
    
+
    The tests are controlled via a namelist. Sample namelist files are located in the testpio/namelists directory. It contains a set of general namelists and specific namelists to setup a computational decomposition and an IO decomposition. The computational decomposition should be setup to duplicate a realistic model data decomposition. The IO decomposition is generally not used, but in some cases, can be used and impacts IO performance. The IO decomposition is an intermediate decomposition that provides compatability between a relative arbitrary computational decomposition and the MPI-IO, netcdf, pnetcdf, or other IO layers. Depending on the IO methods used, only certain IO decompositions are valid. In general, the IO decomposition is not used and is set internally.
    
+
    The namelist input file is called "testpio_in". The first namelist block, io_nml, contains some general settings:
    
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    namelist io_nml  
    casename string, user defined test case name  
    nx_global integer, global size of "x" dimension  
    ny_global integer, global size of "y" dimension  
    nz_global integer, glboal size of "z" dimension  
    ioFMT string, type and i/o method of data file ("bin","pnc","snc"), binary, pnetcdf, or serial netcdf  
    rearr string, type of rearranging to be done ("none","mct","box","boxauto")  
    nprocsIO integer, number of IO processors used only when rearr is not "none", if rearr is "none", then the IO decomposition will be the computational decomposition  
    base integer, base pe associated with nprocIO striding  
    stride integer, the stride of io pes across the global pe set. A stride=-1 directs PIO to calculate the stride automatically.  
    num_aggregator integer, mpi-io number of aggregators, only used if no pio rearranging is done  
    dir string, directory to write output data, this must exist before the model starts up  
    num_iodofs tests either 1dof or 2dof init decomp interfaces (1,2)  
    maxiter integer, the number of trials for the test  
    DebugLevel integer, sets the debug level (0,1,2,3)  
    compdof_input string, setting of the compDOF ('namelist' or a filename)  
    compdof_output string, whether the compDOF is saved to disk ('none' or a filename)  
    
+
    Notes:
      
+
    • the "mct" rearr option is not currently available
      • 
+
    • if rearr is set to "none", then the computational decomposition is also going to be used as the IO decomposition. The computation decomposition must therefore be suited to the underlying I/O methods.
      • 
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    • if rearr is set to "box", then pio is going to generate an internal IO decomposition automatically and pio will rearrange to that decomp.
      • 
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    • num_aggregator is used with mpi-io and no pio rearranging. mpi-io is only used with binary data.
      • 
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    • nprocsIO, base, and stride implementation has some special options
        
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      • if nprocsIO > 0 and stride > 0, then use input values
        • 
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      • if nprocsIO > 0 and stride <= 0, then stride=(npes-base)/nprocsIO
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      • if nprocsIO <= 0 and stride > 0, then nprocsIO=(npes-base)/stride
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      • if nprocsIO <= 0 and stride <= 0, then nprocsIO=npes, base=0, stride=1
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    Two other namelist blocks exist to described the computational and IO decompositions, compdof_nml and iodof_nml. These namelist blocks are identical in use.
    
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    namelist compdof_nml - or - iodof_nml  
    nblksppe integer, sets the number of blocks desired per pe, the default is one per pe for automatic decomposition. increasing this increases the flexibility of decompositions.  
    grdorder string, sets the gridcell ordering within the block ("xyz","xzy","yxz","yzx","zxy","zyx")  
    grddecomp string, sets up the block size with gdx, gdy, and gdz, see below, ("x","y","z","xy","xye","xz","xze","yz","yze", "xyz","xyze","setblk")  
    gdx integer, "x" size of block  
    gdy integer, "y" size of block  
    gdz integer, "z" size of block  
    blkorder string, sets the block ordering within the domain ("xyz","xzy","yxz","yzx","zxy","zyx")  
    blkdecomp1 string, sets up the block / processor layout within the domain with bdx, bdy, and bdz, see below. ("x","y","z","xy","xye","xz","xze","yz","yze","xyz","xyze", "setblk","cont1d","cont1dm")  
    blkdecomp2 string, provides an additional option to the block decomp after blkdecomp1 is computes ("","ysym2","ysym4")  
    bdx integer, "x" numbers of contiguous blocks  
    bdy integer, "y" numbers of contiguous blocks  
    bdz integer, "z" numbers of contiguous blocks  
    
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    A description of the decomposition implementation and some examples are provided below.
    
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    Testpio writes out several files including summary information to stdout, data files to the namelists directory, and a netcdf file summarizing the decompositions. The key output information is written to stdout and contains the timing information. In addition, a netcdf file called gdecomp.nc is written that provides both the block and task ids for each gridcell as computed by the decompositions. Finally, foo.* files are written by testpio using the methods specified.
    
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    Currently, the timing information is limited to the high level pio read/write calls which generally will also include copy and rearrange overhead as well as actual I/O time. Addition timers will be added in the future.
    
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    The test script is called testpio_run.pl, it uses the hostname function to determine the platform. New platforms can be added by editing the files build_defaults.xml and Utils.pm. If more than one configuration should be tested on a single platform you can provide two hostnames in this file and specify the name to test in a –host option to testpio_run.pl
    
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    There are several testpio_in files for the pio test suite. The ones that come with pio test specific things. In general, these tests include: 
      
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+sn = serial netcdf and no rearrangement  
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+sb = serial netcdf and box rearrangement 
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+pn = parallel netcdf and no rearrangement 
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+pb = parallel netcdf and box rearrangement 
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+bn = binary I/O and no rearrangement 
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+bb = binary I/O and box rearrangment and the test number (01, etc) is consistent across I/O methods with 
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+01 = all data on root pe, only root pe active in I/O 
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+02 = simple 2d xy decomp across all pes with all pes active in I/O 
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+03 = all data on root pe, all pes active in I/O 
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+04 = simple 2d xy decomp with yxz ordering and stride=4 pes active in I/O 
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+05 = 2d xy decomp with 4 blocks/pe, yxz ordering, xy block decomp, and stride=4 pes active in I/O 
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+06 = 3d xy decomp with 4 blocks/pe, yxz ordering, xy block decomp, and stride=4 pes active in I/O 
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+07 = 3d xyz decomp with 16 blocks/pe, yxz ordering, xyz block decomp with block yzx ordering and stride=4 pes active in I/O 
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+08 = 2d xy decomp with 4 blocks/pe and yxz grid ordering, yxz block ordering and cont1d block decomp the rd01 and wr01 tests are distinct and test writing, reading and use of DOF data via pio methods. 
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    PIO can use several backend libraries including netcdf, pnetcdf and mpi-io. For each library used, a compile time cpp flag is defined (eg _USEMPIIO). The test suite builds and tests the model for several combinations of these cpp flags. 
      
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+snet = serial netcdf only 
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+pnet = parallel netcdf only 
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+mpiio = mpiio only 
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+all = everything on 
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+ant = everything on but timing disabled 
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+Decomposition
    
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    The decomposition implementation supports the decomposition of a general 3 dimensional "nx * ny * nz" grid into multiple blocks of gridcells which are then ordered and assigned to processors. In general, blocks in the decomposition are rectangular, "gdx * gdy * gdz" and the same size, although some blocks around the edges of the domain may be smaller if the decomposition is uneven. Both gridcells within the block and blocks within the domain can be ordered in any of the possible dimension hierarchies, such as "xyz" where the first dimension is the fastest.
    
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    The gdx, gdy, and gdz inputs allow the user to specify the size in any dimension and the grddecomp input specifies which dimensions are to be further optimized. In general, automatic decomposition generation of 3 dimensional grids can be done in any of possible combination of dimensions, (x, y, z, xy, xz, yz, or xyz), with the other dimensions having a fixed block size. The automatic generation of the decomposition is based upon an internal algorithm that tries to determine the most "square" blocks with an additional constraint on minimizing the maximum number of gridcells across processors. If evenly divided grids are desired, use of the "e" addition to grddecomp specifies that the grid decomposition must be evenly divided. The setblk option uses the prescibed gdx, gdy, and gdz inputs without further automation.
    
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    The blkdecomp1 input works fundamentally the same way as the grddecomp in mapping blocks to processors, but has a few additional options. "cont1d" (contiguous 1d) basically unwraps the blocks in the order specified by the blkorder input and then decomposes that "1d" list of blocks onto processors by contiguously grouping blocks together and allocating them to a processor. The number of contiguous blocks that are allocated to a processor is the maximum of the values of bdx, bdy, and bdz inputs. Contiguous blocks are allocated to each processor in turn in a round robin fashion until all blocks are allocated. The "cont1dm" does basically the same thing except the number of contiguous blocks are set automatically such that each processor recieves only 1 set of contiguous blocks. The ysym2 and ysym4 blkdecomp2 options modify the original block layout such that the tasks assigned to the blocks are 2-way or 4-way symetric in the y axis.
    
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    The decomposition tool is extremely flexible, but arbitrary inputs will not always yield valid decompositions. If a valid decomposition cannot be computed based on the global grid size, number of pes, number of blocks desired, and decomposition options, the model will stop.
    
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    As indicated above, the IO decomposition must be suited to the IO methods, so decompositions are even further limited by those constraints. The testpio tool provides limited checking about whether the IO decomposition is valid for the IO method used. Since the IO output is written in "xyz" order, it's likely the best IO performance will be achieved with both grdorder and blkorder set to "xyz" for the IO decomposition.
    
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    Also note that in all cases, regardless of the decomposition, the global gridcell numbering and ordering in the output file is assumed to be "xyz" and defined as a single block. The number scheme in the examples below demonstrates how the namelist input relates back to the grid numbering on the local computational decomposition.
    
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    Some decomposition examples: 
      
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+"B" is the block number 
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+"P" is the processor (1:npes) the block is associated with numbers are the local gridcell numbering within the block if the local dimensions are unrolled. 
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    Standard xyz ordering, 2d decomp: note: blkdecomp plays no role since there is 1 block per pe 
    + nx_global  6       
+ ny_global  4
+ nz_global  1           ______________________________
+ npes       4          |B3  P3        |B4  P4         |
+ nblksppe   1          |              |               |
+ grdorder   "xyz"      |              |               |
+ grddecomp  "xy"       |              |               |
+ gdx        0          |              |               |
+ gdy        0          |--------------+---------------|
+ gdz        0          |B1  P1        |B2  P2         |
+ blkorder   "xyz"      |  4    5   6  |  4   5   6    |
+ blkdecomp1 "xy"       |              |               |
+ blkdecomp2 ""         |              |               |
+ bdx        0          |  1    2   3  |  1   2   3    |
+ bdy        0          |______________|_______________|
+ bdz        0
+
    Same as above but yxz ordering, 2d decomp note: blkdecomp plays no role since there is 1 block per pe 
    + nx_global  6       
+ ny_global  4
+ nz_global  1           _____________________________
+ npes       4          |B2  P2        |B4  P4        |
+ nblksppe   1          |              |              |
+ grdorder   "yxz"      |              |              |
+ grddecomp  "xy"       |              |              |
+ gdx        0          |              |              |
+ gdy        0          |--------------+--------------|
+ gdz        0          |B1  P1        |B3  P3        |
+ blkorder   "yxz"      |  2    4   6  |  2   4   6   |
+ blkdecomp1 "xy"       |              |              |
+ blkdecomp2 ""         |              |              |
+ bdx        0          |  1    3   5  |  1   3   5   |
+ bdy        0          |______________|______________|
+ bdz        0
+
    xyz grid ordering, 1d x decomp note: blkdecomp plays no role since there is 1 block per pe note: blkorder plays no role since it's a 1d decomp 
    + nx_global  8       
+ ny_global  4
+ nz_global  1           _____________________________________
+ npes       4          |B1  P1  |B2  P2   |B3  P3  |B4  P4   |
+ nblksppe   1          | 7   8  |  7   8  |        |         |
+ grdorder   "xyz"      |        |         |        |         |
+ grddecomp  "x"        |        |         |        |         |
+ gdx        0          | 5   6  |  5   6  |        |         |
+ gdy        0          |        |         |        |         |
+ gdz        0          |        |         |        |         |
+ blkorder   "yxz"      | 3   4  |  3   4  |        |         |
+ blkdecomp1 "xy"       |        |         |        |         |
+ blkdecomp2 ""         |        |         |        |         |
+ bdx        0          | 1   2  |  1   2  |        |         |
+ bdy        0          |________|_________|________|_________|
+ bdz        0
+
    yxz block ordering, 2d grid decomp, 2d block decomp, 4 block per pe 
    + nx_global  8       
+ ny_global  4
+ nz_global  1           _____________________________________
+ npes       4          |B4  P2  |B8  P2   |B12  P4 |B16  P4  |
+ nblksppe   4          |        |         |        |         |
+ grdorder   "xyz"      |-----—+------—+-----—+------—|
+ grddecomp  "xy"       |B3  P2  |B7  P2   |B11  P4 |B15  P4  |
+ gdx        0          |        |         |        |         |
+ gdy        0          |-----—+------—+-----—+------—|
+ gdz        0          |B2  P1  |B6  P1   |B10  P3 |B14  P3  |
+ blkorder   "yxz"      |        |         |        |         |
+ blkdecomp1 "xy"       |-----—+------—+-----—+------—|
+ blkdecomp2 ""         |B1  P1  |B5  P1   |B9   P3 |B13  P3  |
+ bdx        0          | 1   2  | 1   2   |        |         |
+ bdy        0          |________|_________|________|_________|
+ bdz        0
+
     
    
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+Generated on Fri Feb 8 2019 12:51:08 for PIO by  
+doxygen
+ 1.8.13
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+
    This is the complete list of members for io_desc_t, including all inherited members.
    
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+
    dimlenio_desc_t
    fillregionio_desc_t
    firstregionio_desc_t
    holegridsizeio_desc_t
    ioidio_desc_t
    llenio_desc_t
    mapio_desc_t
    maplenio_desc_t
    maxbytesio_desc_t
    maxfillregionsio_desc_t
    maxholegridsizeio_desc_t
    maxiobuflenio_desc_t
    maxregionsio_desc_t
    mpitypeio_desc_t
    mpitype_sizeio_desc_t
    ndimsio_desc_t
    ndofio_desc_t
    needsfillio_desc_t
    needssortio_desc_t
    nextio_desc_t
    nrecvsio_desc_t
    num_aiotasksio_desc_t
    num_stypesio_desc_t
    piotypeio_desc_t
    piotype_sizeio_desc_t
    rcountio_desc_t
    rearr_optsio_desc_t
    rearrangerio_desc_t
    remapio_desc_t
    rfromio_desc_t
    rindexio_desc_t
    rtypeio_desc_t
    scountio_desc_t
    sindexio_desc_t
    stypeio_desc_t
    subset_commio_desc_t