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GBWTGraph v0.3

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@jltsiren jltsiren released this 14 Apr 08:04
· 376 commits to master since this release
  • Implemented the new SerializableHandleGraph interface.
  • Query MinimizerIndex::count_and_find() that returns the occurrence count and a pointer to the internal representation of the occurrences.
  • Better path cover for acyclic component by always starting from a head node in such components.
  • Avoid querying for nonexistent nodes during construction when the source graph has gaps between node ids.
  • Store 64 bits of payload for each position in the minimizer index.
  • Minimizer index file format v6 (not compatible with the earlier versions).