From a9b1858968e9d181f989febe0ae4921ec9cdce10 Mon Sep 17 00:00:00 2001 From: dcchivian Date: Tue, 26 Sep 2023 01:05:01 +0000 Subject: [PATCH] move build scripts to better loc --- {data/genome_obj_build => build}/README.txt | 0 .../scripts/check_gtdb_proteome_gene_coords.py | 0 {data/genome_obj_build => build}/scripts/check_metadata_header.pl | 0 .../scripts/download_ncbi_gff+fna_files.pl | 0 .../scripts/get_sprep_genome_IDs_for_genera.pl | 0 .../genome_obj_build => build}/scripts/merge_GTDB_NCBI_genomes.pl | 0 .../scripts/prepare_batch_genome_feature_update.pl | 0 .../scripts/prepare_batch_genome_field_update.pl | 0 .../scripts/prepare_batch_genome_import-GFF+FNA.pl | 0 .../scripts/prepare_batch_genome_lineage_update.pl | 0 10 files changed, 0 insertions(+), 0 deletions(-) rename {data/genome_obj_build => build}/README.txt (100%) rename {data/genome_obj_build => build}/scripts/check_gtdb_proteome_gene_coords.py (100%) rename {data/genome_obj_build => build}/scripts/check_metadata_header.pl (100%) rename {data/genome_obj_build => build}/scripts/download_ncbi_gff+fna_files.pl (100%) rename {data/genome_obj_build => build}/scripts/get_sprep_genome_IDs_for_genera.pl (100%) rename {data/genome_obj_build => build}/scripts/merge_GTDB_NCBI_genomes.pl (100%) rename {data/genome_obj_build => build}/scripts/prepare_batch_genome_feature_update.pl (100%) rename {data/genome_obj_build => build}/scripts/prepare_batch_genome_field_update.pl (100%) rename {data/genome_obj_build => build}/scripts/prepare_batch_genome_import-GFF+FNA.pl (100%) rename {data/genome_obj_build => build}/scripts/prepare_batch_genome_lineage_update.pl (100%) diff --git a/data/genome_obj_build/README.txt b/build/README.txt similarity index 100% rename from data/genome_obj_build/README.txt rename to build/README.txt diff --git a/data/genome_obj_build/scripts/check_gtdb_proteome_gene_coords.py b/build/scripts/check_gtdb_proteome_gene_coords.py similarity index 100% rename from data/genome_obj_build/scripts/check_gtdb_proteome_gene_coords.py rename to build/scripts/check_gtdb_proteome_gene_coords.py diff --git a/data/genome_obj_build/scripts/check_metadata_header.pl b/build/scripts/check_metadata_header.pl similarity index 100% rename from data/genome_obj_build/scripts/check_metadata_header.pl rename to build/scripts/check_metadata_header.pl diff --git a/data/genome_obj_build/scripts/download_ncbi_gff+fna_files.pl b/build/scripts/download_ncbi_gff+fna_files.pl similarity index 100% rename from data/genome_obj_build/scripts/download_ncbi_gff+fna_files.pl rename to build/scripts/download_ncbi_gff+fna_files.pl diff --git a/data/genome_obj_build/scripts/get_sprep_genome_IDs_for_genera.pl b/build/scripts/get_sprep_genome_IDs_for_genera.pl similarity index 100% rename from data/genome_obj_build/scripts/get_sprep_genome_IDs_for_genera.pl rename to build/scripts/get_sprep_genome_IDs_for_genera.pl diff --git a/data/genome_obj_build/scripts/merge_GTDB_NCBI_genomes.pl b/build/scripts/merge_GTDB_NCBI_genomes.pl similarity index 100% rename from data/genome_obj_build/scripts/merge_GTDB_NCBI_genomes.pl rename to build/scripts/merge_GTDB_NCBI_genomes.pl diff --git a/data/genome_obj_build/scripts/prepare_batch_genome_feature_update.pl b/build/scripts/prepare_batch_genome_feature_update.pl similarity index 100% rename from data/genome_obj_build/scripts/prepare_batch_genome_feature_update.pl rename to build/scripts/prepare_batch_genome_feature_update.pl diff --git a/data/genome_obj_build/scripts/prepare_batch_genome_field_update.pl b/build/scripts/prepare_batch_genome_field_update.pl similarity index 100% rename from data/genome_obj_build/scripts/prepare_batch_genome_field_update.pl rename to build/scripts/prepare_batch_genome_field_update.pl diff --git a/data/genome_obj_build/scripts/prepare_batch_genome_import-GFF+FNA.pl b/build/scripts/prepare_batch_genome_import-GFF+FNA.pl similarity index 100% rename from data/genome_obj_build/scripts/prepare_batch_genome_import-GFF+FNA.pl rename to build/scripts/prepare_batch_genome_import-GFF+FNA.pl diff --git a/data/genome_obj_build/scripts/prepare_batch_genome_lineage_update.pl b/build/scripts/prepare_batch_genome_lineage_update.pl similarity index 100% rename from data/genome_obj_build/scripts/prepare_batch_genome_lineage_update.pl rename to build/scripts/prepare_batch_genome_lineage_update.pl