diff --git a/hippunfold/run.py b/hippunfold/run.py index 209d725f..0565f7aa 100755 --- a/hippunfold/run.py +++ b/hippunfold/run.py @@ -13,7 +13,10 @@ def get_parser(): def main(): - app = SnakeBidsApp(os.path.abspath(os.path.dirname(__file__))) + app = SnakeBidsApp( + os.path.abspath(os.path.dirname(__file__)), + configfile_path="config/snakebids.yml", + ) app.run_snakemake()