From 015650692260c62963993f3ee8feede016e19972 Mon Sep 17 00:00:00 2001
From: Kiran Kumar Ramavarapu
 <166605621+kiranspikewell@users.noreply.github.com>
Date: Tue, 6 Aug 2024 11:20:44 +0530
Subject: [PATCH] Update codeql.yml

Set the GITHUB_TOKEN environment variable and in the git clone command, to authenticate and clone the private repository successfully.
---
 .github/workflows/codeql.yml | 5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/codeql.yml b/.github/workflows/codeql.yml
index 1871d757fe..b299bda972 100644
--- a/.github/workflows/codeql.yml
+++ b/.github/workflows/codeql.yml
@@ -71,7 +71,10 @@ jobs:
       run: tcsh OS_notes.linux_ubuntu_24_64_c_nice.tcsh 2>&1 | tee o.ubuntu_24_c.txt
 
     - name: Clone AFNI repository
-      run: git clone https://github.com/afni/afni.git # private repo
+      env:
+        GITHUB_TOKEN: ${{ secrets.GH_PAT }}
+      run: |
+        git clone https://github.com/YOUR_PRIVATE_REPO_URL.git # private repo
 
     - name: Configure AFNI with CMake
       run: |