From 3b5251724a8384661030481040aa8c816f016250 Mon Sep 17 00:00:00 2001 From: Katherine Eaton Date: Fri, 30 Oct 2020 12:14:03 -0400 Subject: [PATCH] actually add docker py test --- .github/workflows/install.yaml | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/.github/workflows/install.yaml b/.github/workflows/install.yaml index cec35374e..cec780a2c 100644 --- a/.github/workflows/install.yaml +++ b/.github/workflows/install.yaml @@ -121,6 +121,10 @@ jobs: - name: docker pull run: docker pull ktmeaton/plague-phylogeography:dev #------------------------------------------------------------------------# + # Troubleshoot report command versions + - name: test python versions + run: | + pip freeze | grep ptyprocess # run help - name: run help run: docker run -v $PWD:/pipeline -w /pipeline ktmeaton/plague-phylogeography:dev snakemake --profile profiles/gh-actions help;