Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

'Operation facetselfcal failed' error #215

Open
mamtz opened this issue Sep 21, 2017 · 0 comments
Open

'Operation facetselfcal failed' error #215

mamtz opened this issue Sep 21, 2017 · 0 comments

Comments

@mamtz
Copy link

mamtz commented Sep 21, 2017

Hello,
I was trying to run factor but it keeps failing and I don't understand what went wrong. Among others, it gives me a warning that there is a frequency gap of 12 bands. Does that mean that somewhere during prefactor I did something wrong or do I have to change some of the values in the factor parset? The factor output is the following:

`/opt/cep/lofar/lofar_versions/LOFAR-Release-2_21_5/lofar_build/install/gnucxx11_opt/lib64/python2.7/site-packages/lofarpipe/support/utilities.pyc : Using default subprocess module!
/opt/cep/lofar/lofar_versions/LOFAR-Release-2_21_5/lofar_build/install/gnucxx11_opt/lib64/python2.7/site-packages/lofar/parmdb/init.py:22: RuntimeWarning: to-Python converter for std::vector<double, std::allocator > already registered; second conversion method ignored.
from _parmdb import ParmDB
/opt/cep/lofar/lofar_versions/LOFAR-Release-2_21_5/lofar_build/install/gnucxx11_opt/lib64/python2.7/site-packages/lofar/parmdb/init.py:22: RuntimeWarning: to-Python converter for std::vector<std::string, std::allocatorstd::string > already registered; second conversion method ignored.
from _parmdb import ParmDB
INFO - factor:parset - Reading parset file: new_factor.parset
INFO - factor:parset - Using the following groupings for directions: 1:0
INFO - factor:parset - Using up to 40 CPU(s) per node
INFO - factor:parset - Using up to 90.0% of the memory per node for WSClean jobs
INFO - factor:parset - Processing up to 1 direction(s) in parallel per node
INFO - factor:parset - Running up to 7 IO-intensive job(s) in parallel per node
INFO - factor:parset - =========================================================

INFO - factor:parset - Working directory is /data/scratch/maria/factor
INFO - factor:parset - Input MS directory is /data/scratch/maria/target_L530789/results
INFO - factor:parset - Working on 17 input files.
INFO - factor - Setting up cluster/node parameters...
INFO - factor - Using cluster setting: "local" (Single node).
INFO - factor - Checking input bands...
INFO - factor - Building local sky model for source avoidance and DDE calibrator selection (if desired)...
INFO - factor:directions - Found 6 sources through thresholding
INFO - factor - Setting up directions...
INFO - factor:directions - Reading directions file: /data/scratch/maria/factor/factor_directions.txt
Trying CDLL(libgeos_c.so.1)
Library path: 'libgeos_c.so.1'
DLL: <CDLL 'libgeos_c.so.1', handle 5b8c6a0 at 5bbe8d0>
Trying CDLL(libc.so.6)
Library path: 'libc.so.6'
DLL: <CDLL 'libc.so.6', handle 7effc8de34c8 at 5bbe910>
INFO - factor:directions - Adjusting facets to avoid sources...
/home/rafferty/LOFAR/LSMTool/lsmtool/skymodel.py:1457: FutureWarning: np.average currently does not preserve subclasses, but will do so in the future to match the behavior of most other numpy functions such as np.mean. In particular, this means calls which returned a scalar may return a 0-d subclass object instead.
return np.average(c, axis=0)
INFO - factor:directions - Including target (20h18m03.92, +28d39m55.2) in facet adjustment
/home/rafferty/LOFAR/factor/factor/process.py:653: RuntimeWarning: invalid value encountered in double_scalars
effective_flux_jy = peak_flux_jy_bm * (total_flux_jy / peak_flux_jy_bm)**0.667
INFO - factor - Self calibrating 1 direction(s) in Group 1
INFO - factor:facet_patch_3 - Detected a frequency gap of 12 bands; setting wsclean_nchannels_factor to 13 to avoid having a fully flagged WSClean channel
INFO - factor:scheduler - <-- Operation facetselfcal started (direction: facet_patch_3)
log4cplus:ERROR No appenders could be found for logger (LCS.Common.EXCEPTION).
log4cplus:ERROR Please initialize the log4cplus system properly.
ERROR - factor:scheduler - Operation facetselfcal failed due to an error (direction: facet_patch_3)
ERROR - factor:scheduler - Caught an (Keyboard-)Interrupt, stopping all pipelines.
ERROR - factor:scheduler - One or more operations failed due to an error. Exiting...
`

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant