Remove "max-haplotype=400" from UMI config

This doesn't seem to help accuracy in general and increases runtimes (#29).
luntergroup · Oct 16, 2018 · 7de1a3d · 7de1a3d
1 parent 93ba000
commit 7de1a3d
Showing 1 changed file with 0 additions and 5 deletions.
diff --git a/configs/UMI.config b/configs/UMI.config
@@ -39,11 +39,6 @@ min-bubble-score=20
 ## If the downsample limits are increased then be sure to consider also increasing these parameters.
 #
 
-max-haplotypes=400
-#
-## Increase the default maximum number of haplotypes to consider.
-#
-
 somatic-snv-mutation-rate=5e-4
 somatic-indel-mutation-rate=1e-05
 #