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Releases: martin3141/spant

spant 3.1.0

17 Dec 20:30
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  • Tentative implementation of a standard single voxel MRS processing pipeline function: fit_svs.
  • spant user guide has been added to the project: https://spantdoc.wilsonlab.co.uk/
  • Implemented basis caching for sim_basis.
  • scale_amp_molar function has been depreciated. Please use scale_amp_legacy for LCModel style concentration scaling instead.
  • Assumed T1 and T2 relaxation values for molal concentration scaling have been updated. See the user guide for details.

spant 2.24.0

14 Nov 15:54
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  • Added argument to adjust the legend font size in ortho3 function.
  • Improved metabolite simulation performance thanks to the expm package recently adding support for complex matrices.

spant 2.23.0

27 Aug 14:30
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  • abfit options for lipid and MM maximum broadening and maximum frequency shift
    now default to be the same as the metabolite values unless explicitly changed.
  • Added function to calculate the correlation matrix from a basis_set.
  • Fix for RDA files where a comma is sometimes used as a decimal point.

spant 2.22.0

11 Jul 12:30
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  • Added find_bids_mrs and mrs_data2bids helper functions.
  • Improved handling of CMRR semi-LASER SVS water reference scans.
  • Added functions for GLS coil combination.

spant 2.21.0

30 May 08:16
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  • Fixed compiler warnings for Fortran code.
  • Added glm_spec function.
  • Added add_noise_spec_snr function.

spant 2.20.0

02 May 08:26
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  • Added vertical line colour and linetype options for stackplots.
  • Added option to give Y axis labels in units of seconds for spectrograms.

spant 2.19.0

23 Mar 08:21
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  • Removed dependency on smoother package.
  • Added functions for generating BOLD and trapezoidal response shapes.

spant 2.18.0

23 Feb 14:56
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  • Improved automated file type detection.
  • Bug fixes for DICOM MRS reader.
  • scale_spec function now works with basis set objects.
  • Added invert_fit option to plotting methods.

spant 2.17.0

28 Nov 16:16
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  • Simulation duration output is now rounded to 2dp.
  • sim_basis now accepts a character vector of molecular names.
  • Added get_1h_brain_basis_names function.

spant 2.16.0

23 Oct 14:59
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  • Added subset option to mean_dyns function.
  • Added vline option to plot.
  • Added common 31P brain metabolites.
  • Added verbose option to sim_basis.