productive deployment #2602
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| name: CI-CD | |
| # renv with GitHub actions: https://rstudio.github.io/renv/articles/ci.html#github-actions | |
| # Triggered on push and pull request events, schedule for data update | |
| on: | |
| push: | |
| pull_request: | |
| # schedule: | |
| # # every day at 21 UTC | |
| # - cron: "0 21 * * *" | |
| jobs: | |
| CI-CD: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| # We keep a matrix for convenience, but we would typically just run on one | |
| # single OS and R version, aligned with the target deployment environment | |
| matrix: | |
| config: | |
| - {os: ubuntu-latest, r: 'renv'} | |
| env: | |
| # Access token for GitHub | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| # Preserve package sources for informative references in case of errors | |
| R_KEEP_PKG_SOURCE: yes | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v4 | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| # Enable RStudio Package Manager to speed up package installation | |
| use-public-rspm: false | |
| - name: Install system dependencies | |
| # This is not taken care of (yet) by r-lib/actions/setup-renv | |
| # See https://github.com/r-lib/actions/issues/785 | |
| run: | | |
| # We rely on pkgdepends from the library embedded in pak | |
| install.packages("pak", repos = "https://r-lib.github.io/p/pak/stable/") | |
| install.packages("jsonlite") | |
| .libPaths(c(system.file("library", package = "pak"), .libPaths())) | |
| pkgdepends::new_pkg_installation_proposal( | |
| names(jsonlite::read_json("renv.lock")$Packages), config = list(dependencies = FALSE) | |
| )$solve()$install_sysreqs() | |
| shell: Rscript {0} | |
| # done < <(Rscript -e 'writeLines(with(distro::distro(), remotes::system_requirements(id, short_version)))') | |
| - name: Activate renv and restore packages with cache | |
| uses: r-lib/actions/setup-renv@v2 | |
| - name: Fetch and rebuild latest data | |
| if: false && github.event_name == 'schedule' # switched off | |
| run: | | |
| pkgload::load_all(export_all = FALSE, helpers = FALSE, attach_testthat = FALSE) | |
| build_data() | |
| shell: Rscript {0} | |
| - name: Install R CMD check | |
| run: install.packages("rcmdcheck") | |
| shell: Rscript {0} | |
| - name: Check package | |
| uses: r-lib/actions/check-r-package@v2 | |
| - name: Commit and push updated data | |
| if: false && github.event_name == 'schedule' | |
| run: | | |
| git config --local user.email "actions@github.com" | |
| git config --local user.name "GitHub Actions" | |
| git add inst/datahub/\* | |
| git commit -m "Update DataHub data" || echo "No changes to commit" | |
| git pull --ff-only | |
| git push origin | |
| - name: Deploy to shinyapps.io | |
| # Continuous deployment only for pushes to the main / master branch | |
| if: github.ref == 'refs/heads/main' || github.ref == 'refs/heads/master' | |
| env: | |
| SHINYAPPS_ACCOUNT: ${{ secrets.SHINYAPPS_ACCOUNT }} | |
| SHINYAPPS_TOKEN: ${{ secrets.SHINYAPPS_TOKEN }} | |
| SHINYAPPS_SECRET: ${{ secrets.SHINYAPPS_SECRET }} | |
| run: Rscript deploy/deploy-shinyapps.R |