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Filter phenio for biolink validity, fix hpo g2d IDs #460

Merged
merged 4 commits into from
May 20, 2023
Merged

Filter phenio for biolink validity, fix hpo g2d IDs #460

merged 4 commits into from
May 20, 2023

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kevinschaper
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  • add id to hpo g2d edges
  • Add filtering and reporting of phenio node categories and edge predicates
  • So many formatting changes

@kevinschaper kevinschaper changed the title Filter phenio for biolink validity, fix hpo g2d edges Filter phenio for biolink validity, fix hpo g2d IDs May 19, 2023
@kevinschaper kevinschaper requested a review from glass-ships May 19, 2023 18:59
@kevinschaper
Add filtering for edge categories too, and move predicate filtering t…
a3ae03a 
…o happen last after other edge filtering steps
@kevinschaper kevinschaper merged commit 703521c into main May 20, 2023
@kevinschaper kevinschaper deleted the blank_association_categories_g2d_edge_id branch May 20, 2023 00:01
@kevinschaper kevinschaper linked an issue May 20, 2023 that may be closed by this pull request
Make sure phenio edges have a valid category #458
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@glass-ships glass-ships glass-ships approved these changes

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Make sure phenio edges have a valid category
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@kevinschaper @glass-ships