Add correlate 1D implementation #349
Workflow file for this run
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| name: Arraymancer CI | |
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| branches: | |
| - master | |
| jobs: | |
| build: | |
| strategy: | |
| fail-fast: false | |
| max-parallel: 20 | |
| matrix: | |
| # branch: [version-1-0, version-1-2, version-1-4, version-1-6] # [devel] | |
| nim: ['version-1-4', 'version-1-6', 'version-2-0', 'devel'] # 'devel' | |
| target: | |
| - os: linux | |
| cpu: amd64 | |
| # TODO: https://github.com/mratsim/Arraymancer/issues/511 | |
| # - os: linux | |
| # cpu: i386 | |
| - os: macos | |
| cpu: amd64 | |
| # TODO: install openblas or lapack | |
| # - os: windows | |
| # cpu: amd64 | |
| # - os: windows | |
| # cpu: i386 | |
| test_lang: [c] # cpp not configured | |
| include: | |
| - target: | |
| os: linux | |
| builder: ubuntu-20.04 | |
| shell: bash | |
| - target: | |
| os: macos | |
| builder: macos-11 | |
| shell: bash | |
| # - target: | |
| # os: windows | |
| # builder: windows-2019 | |
| # shell: msys2 {0} | |
| defaults: | |
| run: | |
| shell: ${{ matrix.shell }} | |
| name: '${{ matrix.target.os }}-${{ matrix.target.cpu }}-${{ matrix.test_lang }} (${{ matrix.nim}})' | |
| runs-on: ${{ matrix.builder }} | |
| steps: | |
| - name: Get branch name | |
| shell: bash | |
| run: | | |
| if [[ '${{ github.event_name }}' == 'pull_request' ]]; then | |
| echo "##[set-output name=branch_name;]$(echo ${GITHUB_HEAD_REF})" | |
| echo "Branch found (PR): ${GITHUB_HEAD_REF}" | |
| else | |
| echo "##[set-output name=branch_name;]$(echo ${GITHUB_REF#refs/heads/})" | |
| echo "Branch found (not PR): ${GITHUB_REF#refs/heads/}" | |
| fi | |
| id: get_branch | |
| - name: Cancel Previous Runs (except master) | |
| if: > | |
| steps.get_branch.outputs.branch_name != 'master' | |
| uses: styfle/cancel-workflow-action@0.5.0 | |
| with: | |
| access_token: ${{ github.token }} | |
| - name: Checkout arraymancer | |
| uses: actions/checkout@v2 | |
| with: | |
| path: arraymancer | |
| submodules: true | |
| - name: Install build dependencies (Linux i386) | |
| if: runner.os == 'Linux' && matrix.target.cpu == 'i386' | |
| run: | | |
| sudo dpkg --add-architecture i386 | |
| sudo apt-fast update -qq | |
| sudo DEBIAN_FRONTEND='noninteractive' apt-fast install \ | |
| --no-install-recommends -yq gcc-multilib g++-multilib \ | |
| libssl-dev:i386 | |
| mkdir -p external/bin | |
| cat << EOF > external/bin/gcc | |
| #!/bin/bash | |
| exec $(which gcc) -m32 "\$@" | |
| EOF | |
| cat << EOF > external/bin/g++ | |
| #!/bin/bash | |
| exec $(which g++) -m32 "\$@" | |
| EOF | |
| chmod 755 external/bin/gcc external/bin/g++ | |
| echo '${{ github.workspace }}/external/bin' >> $GITHUB_PATH | |
| - name: MSYS2 (Windows i386) | |
| if: runner.os == 'Windows' && matrix.target.cpu == 'i386' | |
| uses: msys2/setup-msys2@v2 | |
| with: | |
| path-type: inherit | |
| msystem: MINGW32 | |
| # update: true | |
| install: >- | |
| base-devel | |
| git | |
| mingw-w64-i686-toolchain | |
| - name: MSYS2 (Windows amd64) | |
| if: runner.os == 'Windows' && matrix.target.cpu == 'amd64' | |
| uses: msys2/setup-msys2@v2 | |
| with: | |
| path-type: inherit | |
| # update: true | |
| install: >- | |
| base-devel | |
| git | |
| mingw-w64-x86_64-toolchain | |
| - name: Restore Nim DLLs dependencies (Windows) from cache | |
| if: runner.os == 'Windows' | |
| id: windows-dlls-cache | |
| uses: actions/cache@v2 | |
| with: | |
| path: external/dlls | |
| key: 'dlls' | |
| - name: Install DLL dependencies (Windows) | |
| if: > | |
| steps.windows-dlls-cache.outputs.cache-hit != 'true' && | |
| runner.os == 'Windows' | |
| run: | | |
| mkdir external | |
| curl -L "https://nim-lang.org/download/windeps.zip" -o external/windeps.zip | |
| 7z x external/windeps.zip -oexternal/dlls | |
| - name: Path to cached dependencies (Windows) | |
| if: > | |
| runner.os == 'Windows' | |
| run: | | |
| echo '${{ github.workspace }}'"/external/dlls" >> $GITHUB_PATH | |
| - name: Derive environment variables | |
| run: | | |
| if [[ '${{ matrix.target.cpu }}' == 'amd64' ]]; then | |
| PLATFORM=x64 | |
| else | |
| PLATFORM=x86 | |
| fi | |
| echo "PLATFORM=${PLATFORM}" >> $GITHUB_ENV | |
| if [[ '${{ matrix.target.os }}' == 'windows' ]]; then | |
| MAKE_CMD="mingw32-make" | |
| else | |
| MAKE_CMD="make" | |
| fi | |
| echo "MAKE_CMD=$MAKE_CMD" >> $GITHUB_ENV | |
| ncpu='' | |
| case '${{ runner.os }}' in | |
| 'Linux') | |
| ncpu=$(nproc) | |
| ;; | |
| 'macOS') | |
| ncpu=$(sysctl -n hw.ncpu) | |
| ;; | |
| 'Windows') | |
| ncpu=${NUMBER_OF_PROCESSORS} | |
| ;; | |
| esac | |
| [[ -z "$ncpu" || $ncpu -le 0 ]] && ncpu=1 | |
| echo "ncpu=${ncpu}" >> $GITHUB_ENV | |
| - uses: alaviss/setup-nim@0.1.1 | |
| with: | |
| path: 'nim' | |
| version: ${{ matrix.nim }} | |
| - name: Install dependencies (Linux 32-bit) | |
| if: runner.os == 'Linux' && matrix.target.cpu == 'i386' | |
| run: | | |
| sudo DEBIAN_FRONTEND='noninteractive' apt-fast install \ | |
| --no-install-recommends -yq \ | |
| libopenblas-dev:i386 | |
| # Apple Accelerate installed by default | |
| # - name: Install dependencies (macOS) | |
| # if: runner.os == 'macOS' | |
| # run: brew install openblas | |
| - name: Install dependencies (Windows) | |
| if: runner.os == 'Windows' && matrix.target.cpu == 'amd64' | |
| shell: msys2 {0} | |
| run: | | |
| pacman -S --needed --noconfirm mingw-w64-x86_64-lapack | |
| - name: Install dependencies (Windows) | |
| if: runner.os == 'Windows' && matrix.target.cpu == 'i386' | |
| shell: msys2 {0} | |
| run: | | |
| pacman -S --needed --noconfirm mingw-w64-i686-lapack | |
| - name: Restore datasets cache | |
| id: datasets-cache | |
| uses: actions/cache@v1 | |
| with: | |
| path: ~/.cache/arraymancer | |
| key: 'datasets' | |
| - name: Run Arraymancer tests | |
| working-directory: arraymancer | |
| run: | | |
| export ARRAYMANCER_TEST_LANG=${{ matrix.test_lang }} | |
| nimble install -y --depsOnly | |
| # Run the tests. | |
| nimble test | |
| - name: Run Arraymancer tests with ORC | |
| working-directory: arraymancer | |
| run: | | |
| export ARRAYMANCER_TEST_LANG=${{ matrix.test_lang }} | |
| nimble install -y --depsOnly | |
| # Run the tests. | |
| nimble test_orc_release | |
| - name: Build docs | |
| if: > | |
| github.event_name == 'push' && github.ref == 'refs/heads/master' && | |
| matrix.target.os == 'linux' && matrix.nim == 'version-2-0' | |
| shell: bash | |
| run: | | |
| cd arraymancer | |
| # need to call `develop`, otherwise `docs.nim` logic breaks | |
| nimble install -y nimhdf5 | |
| nimble develop -y | |
| nimble gen_docs | |
| cp docs/build/{the,}index.html || true | |
| - name: Publish docs | |
| if: > | |
| github.event_name == 'push' && github.ref == 'refs/heads/master' && | |
| matrix.target.os == 'linux' && matrix.nim == 'version-2-0' | |
| uses: crazy-max/ghaction-github-pages@v1 | |
| with: | |
| build_dir: arraymancer/docs/build | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} |