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add sun-nomadlab to integration tests
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Signed-off-by: Jorge Aguilera <jorge@edn.es>
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jagedn committed Jul 13, 2024
1 parent d399109 commit af65b3e
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2 changes: 1 addition & 1 deletion validation/run-all.sh
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Expand Up @@ -68,7 +68,7 @@ if [ "$NFSUN" == 1 ]; then

nextflow run -w s3://juicefs/integration-test -c sun-nomadlab/nextflow.config hello

NXF_ASSETS=s3://juicefs/assets nextflow run bactopia/bactopia \
nextflow run bactopia/bactopia \
-w s3://juicefs/integration-test -c sun-nomadlab/nextflow.config \
-profile test,docker --outdir s3://juicefs/bactopia/outdir \
--accession SRX4563634 --coverage 100 --genome_size 2800000 \
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