diff --git a/data/nextstrain/mpox/clade-i/CHANGELOG.md b/data/nextstrain/mpox/clade-i/CHANGELOG.md index eb229b03..faa9dc11 100644 --- a/data/nextstrain/mpox/clade-i/CHANGELOG.md +++ b/data/nextstrain/mpox/clade-i/CHANGELOG.md @@ -1,3 +1,3 @@ -## Unreleased +## 2024-08-01T22:31:31Z Initial release of this dataset. diff --git a/data/nextstrain/rsv/a/EPI_ISL_412866/CHANGELOG.md b/data/nextstrain/rsv/a/EPI_ISL_412866/CHANGELOG.md index ee9bf22c..deb6140d 100644 --- a/data/nextstrain/rsv/a/EPI_ISL_412866/CHANGELOG.md +++ b/data/nextstrain/rsv/a/EPI_ISL_412866/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-08-01T22:31:31Z - add subclades A.D.1.4-8 - add subclades A.D.3.2-6, add representatives to A.D.3.1 diff --git a/data/nextstrain/rsv/b/EPI_ISL_1653999/CHANGELOG.md b/data/nextstrain/rsv/b/EPI_ISL_1653999/CHANGELOG.md index 1bf245a4..8caa598b 100644 --- a/data/nextstrain/rsv/b/EPI_ISL_1653999/CHANGELOG.md +++ b/data/nextstrain/rsv/b/EPI_ISL_1653999/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-08-01T22:31:31Z - update of reference tree with additional data. No new clades. diff --git a/data_output/index.json b/data_output/index.json index a3e6d359..1164227b 100644 --- a/data_output/index.json +++ b/data_output/index.json @@ -1567,7 +1567,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-08-01T22:31:31Z", + "tag": "2024-08-01--22-31-31Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1591,7 +1592,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-08-01T22:31:31Z", + "tag": "2024-08-01--22-31-31Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1655,7 +1657,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-08-01T22:31:31Z", + "tag": "2024-08-01--22-31-31Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1679,7 +1682,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-08-01T22:31:31Z", + "tag": "2024-08-01--22-31-31Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1778,7 +1782,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-08-01T22:31:31Z", + "tag": "2024-08-01--22-31-31Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -1786,7 +1791,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-08-01T22:31:31Z", + "tag": "2024-08-01--22-31-31Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/mpox/clade-i/unreleased/CHANGELOG.md b/data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/CHANGELOG.md similarity index 58% rename from data_output/nextstrain/mpox/clade-i/unreleased/CHANGELOG.md rename to data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/CHANGELOG.md index eb229b03..faa9dc11 100644 --- a/data_output/nextstrain/mpox/clade-i/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/CHANGELOG.md @@ -1,3 +1,3 @@ -## Unreleased +## 2024-08-01T22:31:31Z Initial release of this dataset. diff --git a/data_output/nextstrain/mpox/clade-i/unreleased/README.md b/data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/README.md similarity index 100% rename from data_output/nextstrain/mpox/clade-i/unreleased/README.md rename to data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/README.md diff --git a/data_output/nextstrain/mpox/clade-i/unreleased/dataset.zip b/data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/dataset.zip similarity index 99% rename from data_output/nextstrain/mpox/clade-i/unreleased/dataset.zip rename to data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/dataset.zip index dafb91e6..5118512a 100644 Binary files a/data_output/nextstrain/mpox/clade-i/unreleased/dataset.zip and b/data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/dataset.zip differ diff --git a/data_output/nextstrain/mpox/clade-i/unreleased/genome_annotation.gff3 b/data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/genome_annotation.gff3 similarity index 100% rename from data_output/nextstrain/mpox/clade-i/unreleased/genome_annotation.gff3 rename to data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/genome_annotation.gff3 diff --git a/data_output/nextstrain/mpox/clade-i/unreleased/pathogen.json b/data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/pathogen.json similarity index 95% rename from data_output/nextstrain/mpox/clade-i/unreleased/pathogen.json rename to data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/pathogen.json index 4ef5dee8..bd1c81ad 100644 --- a/data_output/nextstrain/mpox/clade-i/unreleased/pathogen.json +++ b/data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/pathogen.json @@ -67,7 +67,8 @@ "schemaVersion": "3.0.0", "shortcuts": [], "version": { - "tag": "unreleased", + "updatedAt": "2024-08-01T22:31:31Z", + "tag": "2024-08-01--22-31-31Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/mpox/clade-i/unreleased/reference.fasta b/data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/reference.fasta similarity index 100% rename from data_output/nextstrain/mpox/clade-i/unreleased/reference.fasta rename to data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/reference.fasta diff --git a/data_output/nextstrain/mpox/clade-i/unreleased/sequences.fasta b/data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/mpox/clade-i/unreleased/sequences.fasta rename to data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/sequences.fasta diff --git a/data_output/nextstrain/mpox/clade-i/unreleased/tree.json b/data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/tree.json similarity index 100% rename from data_output/nextstrain/mpox/clade-i/unreleased/tree.json rename to data_output/nextstrain/mpox/clade-i/2024-08-01--22-31-31Z/tree.json diff --git a/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/CHANGELOG.md b/data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/CHANGELOG.md similarity index 93% rename from data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/CHANGELOG.md rename to data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/CHANGELOG.md index ee9bf22c..deb6140d 100644 --- a/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-08-01T22:31:31Z - add subclades A.D.1.4-8 - add subclades A.D.3.2-6, add representatives to A.D.3.1 diff --git a/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/README.md b/data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/README.md similarity index 100% rename from data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/README.md rename to data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/README.md diff --git a/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/dataset.zip b/data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/dataset.zip similarity index 99% rename from data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/dataset.zip rename to data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/dataset.zip index f6f8acb3..5a95d509 100644 Binary files a/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/dataset.zip and b/data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/dataset.zip differ diff --git a/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/genome_annotation.gff3 b/data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/genome_annotation.gff3 similarity index 100% rename from data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/genome_annotation.gff3 rename to data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/genome_annotation.gff3 diff --git a/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/pathogen.json b/data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/pathogen.json similarity index 96% rename from data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/pathogen.json rename to data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/pathogen.json index 943d4910..2012e36b 100644 --- a/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/pathogen.json +++ b/data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/pathogen.json @@ -100,7 +100,8 @@ "L" ], "version": { - "tag": "unreleased", + "updatedAt": "2024-08-01T22:31:31Z", + "tag": "2024-08-01--22-31-31Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/reference.fasta b/data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/reference.fasta similarity index 100% rename from data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/reference.fasta rename to data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/reference.fasta diff --git a/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/sequences.fasta b/data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/sequences.fasta rename to data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/sequences.fasta diff --git a/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/tree.json b/data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/tree.json similarity index 100% rename from data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/tree.json rename to data_output/nextstrain/rsv/a/EPI_ISL_412866/2024-08-01--22-31-31Z/tree.json diff --git a/data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/CHANGELOG.md b/data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/CHANGELOG.md similarity index 91% rename from data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/CHANGELOG.md rename to data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/CHANGELOG.md index 1bf245a4..8caa598b 100644 --- a/data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-08-01T22:31:31Z - update of reference tree with additional data. No new clades. diff --git a/data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/README.md b/data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/README.md similarity index 100% rename from data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/README.md rename to data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/README.md diff --git a/data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/dataset.zip b/data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/dataset.zip similarity index 99% rename from data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/dataset.zip rename to data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/dataset.zip index db33a92b..a9b8b74d 100644 Binary files a/data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/dataset.zip and b/data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/dataset.zip differ diff --git a/data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/genome_annotation.gff3 b/data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/genome_annotation.gff3 similarity index 100% rename from data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/genome_annotation.gff3 rename to data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/genome_annotation.gff3 diff --git a/data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/pathogen.json b/data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/pathogen.json similarity index 96% rename from data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/pathogen.json rename to data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/pathogen.json index c614aed6..e91a5f7f 100644 --- a/data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/pathogen.json +++ b/data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/pathogen.json @@ -100,7 +100,8 @@ "L" ], "version": { - "tag": "unreleased", + "updatedAt": "2024-08-01T22:31:31Z", + "tag": "2024-08-01--22-31-31Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/reference.fasta b/data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/reference.fasta similarity index 100% rename from data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/reference.fasta rename to data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/reference.fasta diff --git a/data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/sequences.fasta b/data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/sequences.fasta rename to data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/sequences.fasta diff --git a/data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/tree.json b/data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/tree.json similarity index 100% rename from data_output/nextstrain/rsv/b/EPI_ISL_1653999/unreleased/tree.json rename to data_output/nextstrain/rsv/b/EPI_ISL_1653999/2024-08-01--22-31-31Z/tree.json