From 1023e279317dd4027845ccb19c4caba3670c685f Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?J=C3=BAlia=20Mir=20Pedrol?= <mirp.julia@gmail.com>
Date: Thu, 1 Aug 2024 13:50:25 +0000
Subject: [PATCH] try fixing corrupted cache from mageck flute Singularity
 container

---
 templates/template_fluteMLE.R | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/templates/template_fluteMLE.R b/templates/template_fluteMLE.R
index 7aea697d..da13c3a7 100644
--- a/templates/template_fluteMLE.R
+++ b/templates/template_fluteMLE.R
@@ -4,6 +4,10 @@
     ####
     #### graphs mageck MLE
 
+    # Required to fix corrupted cache from Singularity container
+    library(ExperimentHub)
+    eh = ExperimentHub()
+
     library(MAGeCKFlute)
     library(clusterProfiler)
     library(ggplot2)