From a2d0de19bf9df78f6c102c0a260f3d6fe46058a5 Mon Sep 17 00:00:00 2001 From: Christopher Hakkaart Date: Fri, 18 Oct 2024 11:59:08 +0200 Subject: [PATCH 1/3] Release lint --- assets/multiqc_config.yml | 4 ++-- nextflow.config | 6 +++--- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/assets/multiqc_config.yml b/assets/multiqc_config.yml index 16a6e09..dd180e7 100644 --- a/assets/multiqc_config.yml +++ b/assets/multiqc_config.yml @@ -1,7 +1,7 @@ report_comment: > - This report has been generated by the nf-core/demo + This report has been generated by the nf-core/demo analysis pipeline. For information about how to interpret these results, please see the - documentation. + documentation. report_section_order: "nf-core-demo-methods-description": order: -1000 diff --git a/nextflow.config b/nextflow.config index 97bd772..485b74f 100644 --- a/nextflow.config +++ b/nextflow.config @@ -164,8 +164,8 @@ profiles { includeConfig !System.getenv('NXF_OFFLINE') && params.custom_config_base ? "${params.custom_config_base}/nfcore_custom.config" : "/dev/null" // Load nf-core/demo custom profiles from different institutions. -// TODO nf-core: Optionally, you can add a pipeline-specific nf-core config at https://github.com/nf-core/configs -// includeConfig !System.getenv('NXF_OFFLINE') && params.custom_config_base ? "${params.custom_config_base}/pipeline/demo.config" : "/dev/null" +// nf-core: Optionally, you can add a pipeline-specific nf-core config at https://github.com/nf-core/configs +includeConfig !System.getenv('NXF_OFFLINE') && params.custom_config_base ? "${params.custom_config_base}/pipeline/demo.config" : "/dev/null" // Set default registry for Apptainer, Docker, Podman, Charliecloud and Singularity independent of -profile // Will not be used unless Apptainer / Docker / Podman / Charliecloud / Singularity are enabled @@ -228,7 +228,7 @@ manifest { description = """An nf-core demo pipeline""" mainScript = 'main.nf' nextflowVersion = '!>=24.04.2' - version = '1.0.2dev' + version = '1.0.2' doi = '10.5281/zenodo.12192442' } From d0f8f3ee3b7567fbc7fb22d8a1ab0ef74af5e173 Mon Sep 17 00:00:00 2001 From: Christopher Hakkaart Date: Fri, 18 Oct 2024 12:34:19 +0200 Subject: [PATCH 2/3] Update change log --- CHANGELOG.md | 15 ++++++++++++--- 1 file changed, 12 insertions(+), 3 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 39e80fa..ee6b23a 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -3,23 +3,32 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/) and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). -## 1.0.2dev - ## 1.0.1 +### Credits + +Special thanks to the following for their reviews and assistance: + +- [Matthias Hörtenhuber](https://github.com/mashehu) +- [Chris Hakkaart](https://github.com/christopher-hakkaart) +- [Maxime Garcia](https://github.com/maxulysse) +- [Friederike Hanssen](https://github.com/FriederikeHanssen) + ### Changed +[#14](https://github.com/nf-core/demo/pull/14) - Update to template 3.0.2 [#7](https://github.com/nf-core/demo/pull/7) - Updated Usage and README docs ### Fixed +[#15](https://github.com/nf-core/demo/pull/15) - Add background to subway map [#7](https://github.com/nf-core/demo/pull/7) - Fixed full path for `test.config` ### Dependencies | Dependency | Old version | New version | | ---------- | ----------- | ----------- | -| `multiqc` | 1.21 | 1.23 | +| `multiqc` | 1.21 | 1.25.1 | ## [1.0.0](https://github.com/nf-core/demo/releases/tag/1.0.0) 2024-06-19 From 63a5dc5101f4b7031049b9732efabc595fd2f253 Mon Sep 17 00:00:00 2001 From: Christopher Hakkaart Date: Fri, 18 Oct 2024 12:38:10 +0200 Subject: [PATCH 3/3] Version 1.0.1 not 1.0.2 --- assets/multiqc_config.yml | 4 ++-- nextflow.config | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/assets/multiqc_config.yml b/assets/multiqc_config.yml index dd180e7..73576c4 100644 --- a/assets/multiqc_config.yml +++ b/assets/multiqc_config.yml @@ -1,7 +1,7 @@ report_comment: > - This report has been generated by the nf-core/demo + This report has been generated by the nf-core/demo analysis pipeline. For information about how to interpret these results, please see the - documentation. + documentation. report_section_order: "nf-core-demo-methods-description": order: -1000 diff --git a/nextflow.config b/nextflow.config index 485b74f..ca5534c 100644 --- a/nextflow.config +++ b/nextflow.config @@ -228,7 +228,7 @@ manifest { description = """An nf-core demo pipeline""" mainScript = 'main.nf' nextflowVersion = '!>=24.04.2' - version = '1.0.2' + version = '1.0.1' doi = '10.5281/zenodo.12192442' }