diff --git a/subworkflows/local/prepare_genome/main.nf b/subworkflows/local/prepare_genome/main.nf index b98a044f..8f8523a1 100644 --- a/subworkflows/local/prepare_genome/main.nf +++ b/subworkflows/local/prepare_genome/main.nf @@ -88,7 +88,7 @@ workflow PREPARE_GENOME { ch_fasta_index.dump(tag: 'PREPARE_GENOME: ch_fasta_index') } else { SAMTOOLS_FAIDX( - ch_fasta.map{ fasta -> [[:], fasta]}, + ch_fasta, [[:], []] ) ch_fasta_index = SAMTOOLS_FAIDX.out.fai.map{ return(it[1])}