From 9161fa24d5cb7a01c7b6e164dd606e5ed88bd8d0 Mon Sep 17 00:00:00 2001
From: Matthieu Muffato <mm49@sanger.ac.uk>
Date: Mon, 14 Aug 2023 17:10:17 +0000
Subject: [PATCH] FastK has got a -M option to control the memory usage

---
 modules/nf-core/fastk/fastk/main.nf | 1 +
 1 file changed, 1 insertion(+)

diff --git a/modules/nf-core/fastk/fastk/main.nf b/modules/nf-core/fastk/fastk/main.nf
index a973e164fef..fec5a4d20f7 100644
--- a/modules/nf-core/fastk/fastk/main.nf
+++ b/modules/nf-core/fastk/fastk/main.nf
@@ -29,6 +29,7 @@ process FASTK_FASTK {
     FastK \\
         $args \\
         -T$task.cpus \\
+        -M${task.memory.toGiga()} \\
         -N${prefix}_fk \\
         $reads