diff --git a/conf/test_nodx_noaln.config b/conf/test_nodx_noaln.config index eed15dd4..c42e2309 100644 --- a/conf/test_nodx_noaln.config +++ b/conf/test_nodx_noaln.config @@ -21,6 +21,6 @@ params { protocol = 'directRNA' skip_demultiplexing = true skip_alignment = true - skip_fusion_analysis= true + skip_fusion_analysis = true skip_modification_analysis=true } diff --git a/nextflow_schema.json b/nextflow_schema.json index 5e716045..6dbb8b4e 100644 --- a/nextflow_schema.json +++ b/nextflow_schema.json @@ -26,7 +26,7 @@ "protocol": { "type": "string", "description": "Input sample type. Valid options: 'DNA', 'cDNA', and 'directRNA'.", - "format": "file-path", + "format": "sample-type", "mimetype": "text/csv", "schema": "assets/schema_input.json", "help_text": "You will need to specify a protocol based on the sample input type. Valid options are 'DNA', 'cDNA', and 'directRNA'.",