From f1b75d4f8cceaae9968907946f968a721cf18191 Mon Sep 17 00:00:00 2001 From: Ramprasad Neethiraj <20065894+ramprasadn@users.noreply.github.com> Date: Mon, 22 Jan 2024 19:36:54 +0530 Subject: [PATCH] Apply suggestions from code review Co-authored-by: Anders Jemt --- subworkflows/local/annotate_genome_snvs.nf | 2 +- subworkflows/local/annotate_mobile_elements.nf | 2 +- subworkflows/local/annotate_mt_snvs.nf | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/subworkflows/local/annotate_genome_snvs.nf b/subworkflows/local/annotate_genome_snvs.nf index 291d3acd..9e3d74d6 100644 --- a/subworkflows/local/annotate_genome_snvs.nf +++ b/subworkflows/local/annotate_genome_snvs.nf @@ -117,7 +117,7 @@ workflow ANNOTATE_GENOME_SNVS { .set { ch_for_mix } ch_for_mix.selvar.mix(ch_for_mix.cadd) - .map { meta, vcf -> return [meta, vcf, []]} + .map { meta, vcf -> return [meta, vcf, []] } .set { ch_vep_in } diff --git a/subworkflows/local/annotate_mobile_elements.nf b/subworkflows/local/annotate_mobile_elements.nf index dc6247bf..265ccce0 100644 --- a/subworkflows/local/annotate_mobile_elements.nf +++ b/subworkflows/local/annotate_mobile_elements.nf @@ -55,7 +55,7 @@ workflow ANNOTATE_MOBILE_ELEMENTS { ch_genome_dictionary ) .vcf - .map { meta, vcf -> return [meta, vcf, []]} + .map { meta, vcf -> return [meta, vcf, []] } .set { ch_vep_in } ENSEMBLVEP_ME( diff --git a/subworkflows/local/annotate_mt_snvs.nf b/subworkflows/local/annotate_mt_snvs.nf index e1ed903a..e7b8ae6a 100644 --- a/subworkflows/local/annotate_mt_snvs.nf +++ b/subworkflows/local/annotate_mt_snvs.nf @@ -54,7 +54,7 @@ workflow ANNOTATE_MT_SNVS { ch_for_mix.merged.mix(ch_for_mix.cadd) .tap { ch_haplogrep_in } - .map { meta, vcf -> return [meta, vcf, []]} + .map { meta, vcf -> return [meta, vcf, []] } .set { ch_vep_in }