From a5c3a9732a2463bc82e77b7d67c45b1335ec1838 Mon Sep 17 00:00:00 2001 From: Edmund Miller Date: Tue, 11 Oct 2022 10:37:08 +0200 Subject: [PATCH] test: Add quantify_salmon to full workflow tests --- tests/pipeline/test_salmon.yml | 2 ++ 1 file changed, 2 insertions(+) diff --git a/tests/pipeline/test_salmon.yml b/tests/pipeline/test_salmon.yml index bfd2ae5c1..7dff542ca 100644 --- a/tests/pipeline/test_salmon.yml +++ b/tests/pipeline/test_salmon.yml @@ -3,6 +3,7 @@ command: nextflow run main.nf -profile test,docker --pseudo_aligner salmon --skip_qc --skip_alignment --outdir results tags: - salmon + - quantify_salmon - skip_qc - skip_alignment - "skip_qc skip_alignment" @@ -11,6 +12,7 @@ command: nextflow run main.nf -profile test,docker --salmon_index false --transcript_fasta false --outdir results tags: - salmon + - quantify_salmon - salmon_index - transcript_fasta - "salmon_index false transcript_fasta false"