From cbb9d5397b36fe02a8efeff579908dfa60352d83 Mon Sep 17 00:00:00 2001 From: Jonathan Manning Date: Tue, 5 Mar 2024 19:28:29 +0000 Subject: [PATCH] Final genomecov test fix --- modules.json | 4 ++-- modules/nf-core/bedtools/genomecov/tests/main.nf.test | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/modules.json b/modules.json index 1321ca536..b7a1250d8 100644 --- a/modules.json +++ b/modules.json @@ -11,8 +11,8 @@ "installed_by": ["modules"] }, "bedtools/genomecov": { - "branch": "genomecov_test_path", - "git_sha": "d481ff3fb7f70c50425c2f6ed1e8fba60a2ae680", + "branch": "master", + "git_sha": "81b90194ce9911dbd55bba2c65c6919f6677abc4", "installed_by": ["modules"] }, "cat/fastq": { diff --git a/modules/nf-core/bedtools/genomecov/tests/main.nf.test b/modules/nf-core/bedtools/genomecov/tests/main.nf.test index 4e825a03c..8213cff95 100644 --- a/modules/nf-core/bedtools/genomecov/tests/main.nf.test +++ b/modules/nf-core/bedtools/genomecov/tests/main.nf.test @@ -73,7 +73,7 @@ nextflow_process { 0.5 ] // sizes - input[1] = file(params.modules_testdata_base_path + "genomics/sarscov2/genome/genome.sizes", checkIfExists: true), + input[1] = file(params.modules_testdata_base_path + "genomics/sarscov2/genome/genome.sizes", checkIfExists: true) // extension input[2] = 'txt' input[3] = false