fix: nf-core lint + EClint

nf-core · Nov 24, 2021 · b36aae7 · b36aae7
1 parent a109e03
commit b36aae7
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Showing 4 changed files with 3 additions and 6 deletions.
diff --git a/modules.json b/modules.json
@@ -36,9 +36,6 @@
             "multiqc": {
                 "git_sha": "3aacd46da2b221ed47aaa05c413a828538d2c2ae"
             },
-            "qualimap/bamqc": {
-                "git_sha": "3aacd46da2b221ed47aaa05c413a828538d2c2ae"
-            },
             "samtools/faidx": {
                 "git_sha": "19035c99d1cd8412b5046c6bb4af787658b84e5b"
             },

diff --git a/subworkflows/local/annotate.nf b/subworkflows/local/annotate.nf
@@ -78,4 +78,4 @@ workflow ANNOTATE {
     vcf_ann  = ch_vcf_ann      // channel: [ val(meta), vcf.gz, vcf.gz.tbi ]
     reports  = ch_reports      //    path: *.html
     versions = ch_versions     //    path: versions.yml
-}
+}
diff --git a/subworkflows/nf-core/markduplicates.nf b/subworkflows/nf-core/markduplicates.nf
diff --git a/subworkflows/nf-core/prepare_recalibration.nf b/subworkflows/nf-core/prepare_recalibration.nf