From 77398d37efcc346b16d7b8f84faaab31910ccdc1 Mon Sep 17 00:00:00 2001
From: maxulysse <max.u.garcia@gmail.com>
Date: Tue, 7 May 2024 15:00:34 +0200
Subject: [PATCH] feat(version): bump pipeline to 3.5.0dev

---
 CHANGELOG.md              | 18 ++++++++++++++++++
 assets/multiqc_config.yml |  4 ++--
 nextflow.config           |  2 +-
 3 files changed, 21 insertions(+), 3 deletions(-)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index 4257960df7..d10e9316b6 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -5,6 +5,24 @@ All notable changes to this project will be documented in this file.
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
+## dev
+
+### Added
+
+### Changed
+
+- [#1513](https://github.com/nf-core/sarek/pull/1513) - Back to dev
+
+### Fixed
+
+### Removed
+
+### Dependencies
+
+### Modules / Subworkflows
+
+### Parameters
+
 ## [3.4.2](https://github.com/nf-core/sarek/releases/tag/3.4.2) - Sájtáristjåhkkå
 
 Sájtáristjåhkkå is another peak (just under 2k) in the Pårte massif, it is one of the few peaks in Sweden that cannot be climbed without proper climbing equipment.
diff --git a/assets/multiqc_config.yml b/assets/multiqc_config.yml
index 206bd82386..ce1a6e388e 100644
--- a/assets/multiqc_config.yml
+++ b/assets/multiqc_config.yml
@@ -3,9 +3,9 @@ custom_logo_url: https://github.com/nf-core/sarek/
 custom_logo_title: "nf-core/sarek"
 
 report_comment: >
-  This report has been generated by the <a href="https://github.com/nf-core/sarek/releases/tag/3.4.2" target="_blank">nf-core/sarek</a>
+  This report has been generated by the <a href="https://github.com/nf-core/sarek/tree/dev" target="_blank">nf-core/sarek</a>
   analysis pipeline. For information about how to interpret these results, please see the
-  <a href="https://nf-co.re/sarek/3.4.2/docs/output" target="_blank">documentation</a>.
+  <a href="https://nf-co.re/sarek/dev/docs/output" target="_blank">documentation</a>.
 report_section_order:
   "nf-core-sarek-methods-description":
     order: -1000
diff --git a/nextflow.config b/nextflow.config
index f26930b9d1..a9385cd9f4 100644
--- a/nextflow.config
+++ b/nextflow.config
@@ -396,7 +396,7 @@ manifest {
     description     = """An open-source analysis pipeline to detect germline or somatic variants from whole genome or targeted sequencing"""
     mainScript      = 'main.nf'
     nextflowVersion = '!>=23.04.0'
-    version         = '3.4.2'
+    version         = '3.5.0dev'
     doi             = '10.12688/f1000research.16665.2, 10.1093/nargab/lqae031, 10.5281/zenodo.3476425'
 }