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FIX: drop snapshot from Deepvariant tests #1597

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Jul 22, 2024
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FIX: drop snapshot from Deepvariant tests #1597

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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -39,6 +39,7 @@ Loametjåhkkå is another one of the main peaks of the Pårte massif.
- [#1563](https://github.com/nf-core/sarek/pull/1563) - Fix `vep_cache_path_full` so that `--refseq/--merged` will work for ENSEMBLVEP
- [#1570](https://github.com/nf-core/sarek/pull/1570) - Remove duplicated notes in FASTQC output docs
- [#1596](https://github.com/nf-core/sarek/pull/1596) - Fix haplotypecaller tests
- [#1597](https://github.com/nf-core/sarek/pull/1597) - Fix deepvariant tests

### Removed

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4 changes: 2 additions & 2 deletions tests/test_deepvariant.yml
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Expand Up @@ -7,7 +7,7 @@
files:
- path: results/multiqc
- path: results/reports/bcftools/deepvariant/sample1/sample1.deepvariant.bcftools_stats.txt
md5sum: a6634ceb1c712de14009b05d273713a7
# md5sum: a6634ceb1c712de14009b05d273713a7
- path: results/reports/vcftools/deepvariant/sample1/sample1.deepvariant.FILTER.summary
md5sum: acce7a163f4070226429f9d6bc3fbd2c
- path: results/reports/vcftools/deepvariant/sample1/sample1.deepvariant.TsTv.count
Expand Down Expand Up @@ -46,7 +46,7 @@
- path: results/no_intervals.bed.gz.tbi
md5sum: f3dac01ea66b95fe477446fde2d31489
- path: results/reports/bcftools/deepvariant/sample1/sample1.deepvariant.bcftools_stats.txt
md5sum: 0c48d8e315ca23c5dc2e7bf71ea0b6a6
# md5sum: 0c48d8e315ca23c5dc2e7bf71ea0b6a6
- path: results/reports/vcftools/deepvariant/sample1/sample1.deepvariant.FILTER.summary
md5sum: 7b17bd18c2d4bf129561c7c6a419a889
- path: results/reports/vcftools/deepvariant/sample1/sample1.deepvariant.TsTv.count
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