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Adding Freebayes Single for Germline VC #179

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merged 10 commits into from
Apr 14, 2020
Merged

Adding Freebayes Single for Germline VC #179

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8676d7b
add freebayes single process
ggabernet Apr 9, 2020
6be0278
freebayes single bams and intervals
ggabernet Apr 9, 2020
1e87246
fix vcf freebayes typo
ggabernet Apr 9, 2020
82fb0d6
freebayessingle process
ggabernet Apr 9, 2020
3d777d1
freebayes single process
ggabernet Apr 9, 2020
2b79c68
fix FreeBayes folder name
ggabernet Apr 9, 2020
fb52728
update docs freebayes
ggabernet Apr 9, 2020
0f26854
Merge branch 'dev' of https://github.com/nf-core/sarek into freebayes
ggabernet Apr 9, 2020
7279337
update changelog freebayes germline
ggabernet Apr 9, 2020
e8be15c
update sarek_workflow.svg
ggabernet Apr 14, 2020
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -24,6 +24,7 @@ Piellorieppe is one of the main massif in the Sarek National Park.
- [#174](https://github.com/nf-core/sarek/pull/174) - Add `variant_calling.md` documentation
- [#175](https://github.com/nf-core/sarek/pull/175) - Add `Sentieon` documentation
- [#176](https://github.com/nf-core/sarek/pull/176) - Add empty `custom` genome in `genomes.config` to allow genomes that are not in `AWS iGenomes`
- [#179](https://github.com/nf-core/sarek/pull/179) - Add `FreeBayes` germline variant calling

### Changed - [2.6dev]

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