From 89dbb6cf5b7fcf71d7e9faf7453912fd45e73564 Mon Sep 17 00:00:00 2001
From: Bruno Grande <bruno.grande@sagebase.org>
Date: Tue, 23 Feb 2021 22:31:07 -0800
Subject: [PATCH 1/2] Retry tasks with exit code 247 for added memory

---
 conf/base.config | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/conf/base.config b/conf/base.config
index c7392fdf62..522e778fc1 100644
--- a/conf/base.config
+++ b/conf/base.config
@@ -15,7 +15,7 @@ process {
   time = {check_resource(24.h * task.attempt)}
   shell = ['/bin/bash', '-euo', 'pipefail']
 
-  errorStrategy = { task.exitStatus in [143,137,104,134,139] ? 'retry' : 'finish' }
+  errorStrategy = { task.exitStatus in [143,137,104,134,139,247] ? 'retry' : 'finish' }
   maxErrors = '-1'
   maxRetries = 3
 

From 1cc5cebd95d4d01c6426d02b0677674c252a9528 Mon Sep 17 00:00:00 2001
From: Bruno Grande <bruno.grande@sagebase.org>
Date: Tue, 23 Feb 2021 22:41:29 -0800
Subject: [PATCH 2/2] Mention new exit code in CHANGELOG

---
 CHANGELOG.md | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index 3db854e7a0..9419a1c329 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -5,6 +5,12 @@ All notable changes to this project will be documented in this file.
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
+## [dev](https://github.com/nf-core/sarek/tree/dev)
+
+### Added
+
+- [#353](https://github.com/nf-core/sarek/pull/353) - Add support for task retries with exit code 247 (exhibited by Picard MarkDuplicates)
+
 ## [2.7](https://github.com/nf-core/sarek/releases/tag/2.7) - Pårte
 
 Pårte is one of the main massif in the Sarek National Park.