From 6e0ec01cb6a3b4c20126898e0619ca170bbe0b08 Mon Sep 17 00:00:00 2001 From: Nicolas Vannieuwkerke <101190534+nvnieuwk@users.noreply.github.com> Date: Tue, 8 Oct 2024 15:46:05 +0200 Subject: [PATCH 1/6] Fix a typo in the linting action --- nf_core/pipeline-template/.github/workflows/linting.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/nf_core/pipeline-template/.github/workflows/linting.yml b/nf_core/pipeline-template/.github/workflows/linting.yml index dbba830ec1..0eee862f96 100644 --- a/nf_core/pipeline-template/.github/workflows/linting.yml +++ b/nf_core/pipeline-template/.github/workflows/linting.yml @@ -42,10 +42,10 @@ jobs: architecture: "x64" - name: read .nf-core.yml - uses: pietrobolcato/action-read-yaml@1.0.0 + uses: pietrobolcato/action-read-yaml@1.1.0 id: read_yml with: - config: ${{ github.workspace }}/.nf-core.yaml + config: ${{ github.workspace }}/.nf-core.yml - name: Install dependencies run: | From abc50bca5eb354e15738b7192cd43337649c9332 Mon Sep 17 00:00:00 2001 From: Nicolas Vannieuwkerke <101190534+nvnieuwk@users.noreply.github.com> Date: Tue, 8 Oct 2024 15:49:53 +0200 Subject: [PATCH 2/6] Update CHANGELOG.md --- CHANGELOG.md | 5 +++++ 1 file changed, 5 insertions(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 9d62a9ab60..ec45b06dbe 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,5 +1,10 @@ # nf-core/tools: Changelog +## v3.1.0dev + +### Bug fixes +- Fixed an issue where the linting CI action didn't read the correct file + ## [v3.0.0 - Titanium Tapir](https://github.com/nf-core/tools/releases/tag/3.0.0) - [2024-10-08] **Highlights** From 20c23ce7d35d1b169251f50ed6c01bd32b4b947d Mon Sep 17 00:00:00 2001 From: nf-core-bot Date: Tue, 8 Oct 2024 13:52:52 +0000 Subject: [PATCH 3/6] [automated] Fix code linting --- CHANGELOG.md | 1 + 1 file changed, 1 insertion(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index ec45b06dbe..84a48be54e 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -3,6 +3,7 @@ ## v3.1.0dev ### Bug fixes + - Fixed an issue where the linting CI action didn't read the correct file ## [v3.0.0 - Titanium Tapir](https://github.com/nf-core/tools/releases/tag/3.0.0) - [2024-10-08] From 27e6f49b464ee5500d0d61c69bb7d4a198f0d79c Mon Sep 17 00:00:00 2001 From: Nicolas Vannieuwkerke <101190534+nvnieuwk@users.noreply.github.com> Date: Tue, 8 Oct 2024 15:56:20 +0200 Subject: [PATCH 4/6] Update CHANGELOG.md MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Co-authored-by: Matthias Hörtenhuber --- CHANGELOG.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 84a48be54e..709e7b6ea6 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,6 +1,6 @@ # nf-core/tools: Changelog -## v3.1.0dev +## v3.0.1dev ### Bug fixes From 83eb32a8a07ad0dcadfc2b3cd30e991bb7f7773a Mon Sep 17 00:00:00 2001 From: Nicolas Vannieuwkerke <101190534+nvnieuwk@users.noreply.github.com> Date: Tue, 8 Oct 2024 16:02:58 +0200 Subject: [PATCH 5/6] Update .gitpod.yml --- .gitpod.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.gitpod.yml b/.gitpod.yml index f92457278b..efe193f35f 100644 --- a/.gitpod.yml +++ b/.gitpod.yml @@ -1,4 +1,4 @@ -image: nfcore/gitpod:latest +image: nfcore/gitpod:dev tasks: - name: install current state of nf-core/tools and setup pre-commit command: | From 87f0dfdfb0c0d752982df3fcd0da82f4bc13ab77 Mon Sep 17 00:00:00 2001 From: Nicolas Vannieuwkerke <101190534+nvnieuwk@users.noreply.github.com> Date: Tue, 8 Oct 2024 16:03:53 +0200 Subject: [PATCH 6/6] Update setup.py --- setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.py b/setup.py index 95a4655306..37aa62a4d6 100644 --- a/setup.py +++ b/setup.py @@ -2,7 +2,7 @@ from setuptools import find_packages, setup -version = "3.0.0" +version = "3.0.1dev" with open("README.md") as f: readme = f.read()