diff --git a/.cache.tar.xz b/.cache.tar.xz
index bf56be42fd..b956223c3a 100644
Binary files a/.cache.tar.xz and b/.cache.tar.xz differ
diff --git a/public/components.json b/public/components.json
index acb3e38af9..9695319a67 100644
--- a/public/components.json
+++ b/public/components.json
@@ -7560,6 +7560,10 @@
           "name": "rnafusion",
           "version": "3.0.2"
         },
+        {
+          "name": "rnafusion",
+          "version": "3.0.2"
+        },
         {
           "name": "rnafusion",
           "version": "3.0.2"
@@ -24576,6 +24580,14 @@
           "name": "genomeassembler",
           "version": "dev"
         },
+        {
+          "name": "pathogensurveillance",
+          "version": "dev"
+        },
+        {
+          "name": "genomeassembler",
+          "version": "dev"
+        },
         {
           "name": "pathogensurveillance",
           "version": "dev"
@@ -105856,6 +105868,10 @@
           "name": "genomeassembler",
           "version": "dev"
         },
+        {
+          "name": "genomeassembler",
+          "version": "dev"
+        },
         {
           "name": "genomeassembler",
           "version": "dev"
diff --git a/public/pipelines.json b/public/pipelines.json
index cf699deea9..22f1546fe9 100644
--- a/public/pipelines.json
+++ b/public/pipelines.json
@@ -20545,7 +20545,7 @@
             "url": "https://api.github.com/repos/nf-core/methylseq",
             "created_at": "2018-03-12T15:46:42Z",
             "updated_at": "2024-09-21T13:49:18Z",
-            "pushed_at": "2024-09-21T13:39:18Z",
+            "pushed_at": "2024-09-21T15:18:48Z",
             "homepage": "https://nf-co.re/methylseq",
             "size": 21069,
             "stargazers_count": 137,
@@ -36530,10 +36530,10 @@
             "fork": false,
             "url": "https://api.github.com/repos/nf-core/scdownstream",
             "created_at": "2024-06-11T06:38:31Z",
-            "updated_at": "2024-09-21T14:43:10Z",
-            "pushed_at": "2024-09-21T14:43:09Z",
+            "updated_at": "2024-09-21T15:17:32Z",
+            "pushed_at": "2024-09-21T15:17:29Z",
             "homepage": "https://nf-co.re/scdownstream",
-            "size": 1765,
+            "size": 1800,
             "stargazers_count": 28,
             "watchers_count": 28,
             "language": "Nextflow",
@@ -36629,7 +36629,7 @@
             "contributors": [
                 {
                     "name": "nictru",
-                    "count": 366,
+                    "count": 380,
                     "avatar_url": "https://avatars.githubusercontent.com/u/52698566?v=4"
                 },
                 {
@@ -36659,9 +36659,9 @@
                 }
             ],
             "released_after_tools": false,
-            "head_sha": "d13a47550c3a441e7871ae1e643eeddb0609fe0c",
+            "head_sha": "241ccb43482ce24b9a6ce888cdcf87230338102c",
             "last_release_is_head": false,
-            "last_release_vs_default_compare_url": "https://github.com/nf-core/scdownstream/compare/d13a47550c3a441e7871ae1e643eeddb0609fe0c...undefined",
+            "last_release_vs_default_compare_url": "https://github.com/nf-core/scdownstream/compare/241ccb43482ce24b9a6ce888cdcf87230338102c...undefined",
             "commits_to_dev": 30,
             "is_DSL2": true,
             "has_nf_test": false,
@@ -36675,8 +36675,8 @@
             "releases": [
                 {
                     "tag_name": "dev",
-                    "published_at": "2024-09-21T14:43:06Z",
-                    "tag_sha": "d13a47550c3a441e7871ae1e643eeddb0609fe0c",
+                    "published_at": "2024-09-21T15:17:25Z",
+                    "tag_sha": "241ccb43482ce24b9a6ce888cdcf87230338102c",
                     "has_schema": true,
                     "doc_files": [
                         "docs/output.md",