From db9b2cc9b1f3ef3805b157a45f3ad20f74cbd93e Mon Sep 17 00:00:00 2001
From: andrewjpage <andrewjpage@gmail.com>
Date: Fri, 18 May 2012 11:57:16 +0100
Subject: [PATCH] increase window size to 20k

---
 src/branch_sequences.h | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/src/branch_sequences.h b/src/branch_sequences.h
index ed55b2af..d34da722 100644
--- a/src/branch_sequences.h
+++ b/src/branch_sequences.h
@@ -46,8 +46,8 @@ int extend_end_of_block_right_over_gap(int block_coord, char * branch_snp_sequen
 #define DEFAULT_SNP_DENSITY 0.000001
 #define WINDOW_SNP_MODE_TARGET 10
 #define MIN_WINDOW_SIZE 10
-#define MAX_WINDOW_SIZE 50000
+#define MAX_WINDOW_SIZE 20000
 #define RANDOMNESS_DAMPNER 0.05
 #define MAX_SAMPLE_NAME_SIZE 1024
 
-#endif
\ No newline at end of file
+#endif