diff --git a/README.md b/README.md
index 8ca006c..f55e141 100644
--- a/README.md
+++ b/README.md
@@ -2,9 +2,9 @@
-# nsidc-metgen
+# MetGenC
-`nsidc-metgen` via the MetGenC utility, enables Operations staff and data
+The `MetGenC` toolkit enables Operations staff and data
producers to create metadata files conforming to NASA's Common Metadata Repository UMM-G
specification and ingest data directly to NASA EOSDIS’s Cumulus archive. Cumulus is an
open source cloud-based data ingest, archive, distribution, and management framework
@@ -197,6 +197,14 @@ Options:
$ source scripts/env.sh default
$ metgenc process --config example/modscg.ini
+* Validate JSON output
+
+ $ metgenc validate -c example/modscg.ini -t cnm
+
+ The package `check-jsonschema` is also installed by MetGenC and can be used to validate a single file:
+
+ $ check-jsonschema --schemafile
+
* Exit the Poetry shell:
$ exit
diff --git a/poetry.lock b/poetry.lock
index 34e8805..96e4a10 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,4 +1,4 @@
-# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand.
+# This file is automatically @generated by Poetry 1.8.4 and should not be changed by hand.
[[package]]
name = "annotated-types"
@@ -43,13 +43,13 @@ tests-mypy = ["mypy (>=1.11.1)", "pytest-mypy-plugins"]
[[package]]
name = "aws-sam-translator"
-version = "1.91.0"
+version = "1.92.0"
description = "AWS SAM Translator is a library that transform SAM templates into AWS CloudFormation templates"
optional = false
python-versions = "!=4.0,<=4.0,>=3.8"
files = [
- {file = "aws_sam_translator-1.91.0-py3-none-any.whl", hash = "sha256:9ebf4b53c226338e6b89d14d8583bc4559b87f0be52ed8d577c5a1dc2db14962"},
- {file = "aws_sam_translator-1.91.0.tar.gz", hash = "sha256:0cdfbc598f384c430c3ec064f6008d80c5a0d58f1dc45ca4e331ae5c43cb4697"},
+ {file = "aws_sam_translator-1.92.0-py3-none-any.whl", hash = "sha256:10e77ab628cead3d0e8ee0211eb84c04010c051b9a48ce6b15171c39bdbe917d"},
+ {file = "aws_sam_translator-1.92.0.tar.gz", hash = "sha256:49014e783180ca1fcdd70790645a850d20f4285c19ae694d37fefc52a60d7c64"},
]
[package.dependencies]
@@ -78,17 +78,17 @@ wrapt = "*"
[[package]]
name = "boto3"
-version = "1.35.47"
+version = "1.35.63"
description = "The AWS SDK for Python"
optional = false
python-versions = ">=3.8"
files = [
- {file = "boto3-1.35.47-py3-none-any.whl", hash = "sha256:0b307f685875e9c7857ce21c0d3050d8d4f3778455a6852d5f98ac75194b400e"},
- {file = "boto3-1.35.47.tar.gz", hash = "sha256:65b808e4cf1af8c2f405382d53656a0d92eee8f85c7388c43d64c7a5571b065f"},
+ {file = "boto3-1.35.63-py3-none-any.whl", hash = "sha256:d0f938d4f6f392b6ffc5e75fff14a42e5bbb5228675a0367c8af55398abadbec"},
+ {file = "boto3-1.35.63.tar.gz", hash = "sha256:deb593d9a0fb240deb4c43e4da8e6626d7c36be7b2fd2fe28f49d44d395b7de0"},
]
[package.dependencies]
-botocore = ">=1.35.47,<1.36.0"
+botocore = ">=1.35.63,<1.36.0"
jmespath = ">=0.7.1,<2.0.0"
s3transfer = ">=0.10.0,<0.11.0"
@@ -97,13 +97,13 @@ crt = ["botocore[crt] (>=1.21.0,<2.0a0)"]
[[package]]
name = "botocore"
-version = "1.35.47"
+version = "1.35.63"
description = "Low-level, data-driven core of boto 3."
optional = false
python-versions = ">=3.8"
files = [
- {file = "botocore-1.35.47-py3-none-any.whl", hash = "sha256:05f4493119a96799ff84d43e78691efac3177e1aec8840cca99511de940e342a"},
- {file = "botocore-1.35.47.tar.gz", hash = "sha256:f8f703463d3cd8b6abe2bedc443a7ab29f0e2ff1588a2e83164b108748645547"},
+ {file = "botocore-1.35.63-py3-none-any.whl", hash = "sha256:0ca1200694a4c0a3fa846795d8e8a08404c214e21195eb9e010c4b8a4ca78a4a"},
+ {file = "botocore-1.35.63.tar.gz", hash = "sha256:2b8196bab0a997d206c3d490b52e779ef47dffb68c57c685443f77293aca1589"},
]
[package.dependencies]
@@ -206,13 +206,13 @@ pycparser = "*"
[[package]]
name = "cfn-lint"
-version = "1.18.1"
+version = "1.19.0"
description = "Checks CloudFormation templates for practices and behaviour that could potentially be improved"
optional = false
python-versions = ">=3.8"
files = [
- {file = "cfn_lint-1.18.1-py3-none-any.whl", hash = "sha256:adee5d07a97acc4b9edf141553b9d3ece14eeb4aaf150bcfebc79103689c65e3"},
- {file = "cfn_lint-1.18.1.tar.gz", hash = "sha256:09139c4260897ada66034b57c9d9979cc2ec25856660d8f114f373dc4f70a34a"},
+ {file = "cfn_lint-1.19.0-py3-none-any.whl", hash = "sha256:9c43a6b866915df6d2ac5584000ef05e53c67624809808c2cebd3dc6154b7c14"},
+ {file = "cfn_lint-1.19.0.tar.gz", hash = "sha256:63835e083f7831e54c512bce4808754df221b5895aed9a114c71879d1cc4ebff"},
]
[package.dependencies]
@@ -392,6 +392,28 @@ files = [
{file = "charset_normalizer-3.4.0.tar.gz", hash = "sha256:223217c3d4f82c3ac5e29032b3f1c2eb0fb591b72161f86d93f5719079dae93e"},
]
+[[package]]
+name = "check-jsonschema"
+version = "0.29.4"
+description = "A jsonschema CLI and pre-commit hook"
+optional = false
+python-versions = ">=3.8"
+files = [
+ {file = "check_jsonschema-0.29.4-py3-none-any.whl", hash = "sha256:7cecf505b4d2aba02e260daa4834346566b1ef3c22720b40cc78cbc72a27fe3e"},
+ {file = "check_jsonschema-0.29.4.tar.gz", hash = "sha256:984864fabc82a108e30cb1ff63b6b7e6f43a7eb7df8d95a603051b0ca625184d"},
+]
+
+[package.dependencies]
+click = ">=8,<9"
+jsonschema = ">=4.18.0,<5.0"
+regress = ">=0.4.0"
+requests = "<3.0"
+"ruamel.yaml" = "0.18.6"
+
+[package.extras]
+dev = ["click-type-test (==0.0.7)", "coverage (<8)", "pytest (<9)", "pytest-xdist (<4)", "responses (==0.25.3)"]
+docs = ["furo (==2024.8.6)", "sphinx (<9)", "sphinx-issues (<5)"]
+
[[package]]
name = "click"
version = "8.1.7"
@@ -840,20 +862,20 @@ files = [
[[package]]
name = "moto"
-version = "5.0.18"
+version = "5.0.20"
description = ""
optional = false
python-versions = ">=3.8"
files = [
- {file = "moto-5.0.18-py2.py3-none-any.whl", hash = "sha256:8e25401f7d7910e19a732b417e0d503ef86cf4de9114a273dd62679a42f3be1c"},
- {file = "moto-5.0.18.tar.gz", hash = "sha256:8a7ad2f53a2e6cc9db2ff65c0e0d4b5d7e78bc00b825c9e1ff6cc394371e76e9"},
+ {file = "moto-5.0.20-py2.py3-none-any.whl", hash = "sha256:b6df0041255acb973f2adcb31e3dee1379770ece0253520d4d15986d22aa06cf"},
+ {file = "moto-5.0.20.tar.gz", hash = "sha256:24b1319cc66f81f40817a57ac80602a5f1862669bdd621f0d96ab989a6578255"},
]
[package.dependencies]
antlr4-python3-runtime = {version = "*", optional = true, markers = "extra == \"all\""}
aws-xray-sdk = {version = ">=0.93,<0.96 || >0.96", optional = true, markers = "extra == \"all\""}
boto3 = ">=1.9.201"
-botocore = ">=1.14.0"
+botocore = ">=1.14.0,<1.35.45 || >1.35.45,<1.35.46 || >1.35.46"
cfn-lint = {version = ">=0.40.0", optional = true, markers = "extra == \"all\""}
cryptography = ">=3.3.1"
docker = {version = ">=3.0.0", optional = true, markers = "extra == \"all\""}
@@ -1061,64 +1083,66 @@ test = ["pytest (>=7.2)", "pytest-cov (>=4.0)"]
[[package]]
name = "numpy"
-version = "2.1.2"
+version = "2.1.3"
description = "Fundamental package for array computing in Python"
optional = false
python-versions = ">=3.10"
files = [
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+ {file = "watchdog-6.0.0-cp39-cp39-macosx_11_0_arm64.whl", hash = "sha256:e7631a77ffb1f7d2eefa4445ebbee491c720a5661ddf6df3498ebecae5ed375c"},
+ {file = "watchdog-6.0.0-pp310-pypy310_pp73-macosx_10_15_x86_64.whl", hash = "sha256:c7ac31a19f4545dd92fc25d200694098f42c9a8e391bc00bdd362c5736dbf881"},
+ {file = "watchdog-6.0.0-pp310-pypy310_pp73-macosx_11_0_arm64.whl", hash = "sha256:9513f27a1a582d9808cf21a07dae516f0fab1cf2d7683a742c498b93eedabb11"},
+ {file = "watchdog-6.0.0-pp39-pypy39_pp73-macosx_10_15_x86_64.whl", hash = "sha256:7a0e56874cfbc4b9b05c60c8a1926fedf56324bb08cfbc188969777940aef3aa"},
+ {file = "watchdog-6.0.0-pp39-pypy39_pp73-macosx_11_0_arm64.whl", hash = "sha256:e6439e374fc012255b4ec786ae3c4bc838cd7309a540e5fe0952d03687d8804e"},
+ {file = "watchdog-6.0.0-py3-none-manylinux2014_aarch64.whl", hash = "sha256:7607498efa04a3542ae3e05e64da8202e58159aa1fa4acddf7678d34a35d4f13"},
+ {file = "watchdog-6.0.0-py3-none-manylinux2014_armv7l.whl", hash = "sha256:9041567ee8953024c83343288ccc458fd0a2d811d6a0fd68c4c22609e3490379"},
+ {file = "watchdog-6.0.0-py3-none-manylinux2014_i686.whl", hash = "sha256:82dc3e3143c7e38ec49d61af98d6558288c415eac98486a5c581726e0737c00e"},
+ {file = "watchdog-6.0.0-py3-none-manylinux2014_ppc64.whl", hash = "sha256:212ac9b8bf1161dc91bd09c048048a95ca3a4c4f5e5d4a7d1b1a7d5752a7f96f"},
+ {file = "watchdog-6.0.0-py3-none-manylinux2014_ppc64le.whl", hash = "sha256:e3df4cbb9a450c6d49318f6d14f4bbc80d763fa587ba46ec86f99f9e6876bb26"},
+ {file = "watchdog-6.0.0-py3-none-manylinux2014_s390x.whl", hash = "sha256:2cce7cfc2008eb51feb6aab51251fd79b85d9894e98ba847408f662b3395ca3c"},
+ {file = "watchdog-6.0.0-py3-none-manylinux2014_x86_64.whl", hash = "sha256:20ffe5b202af80ab4266dcd3e91aae72bf2da48c0d33bdb15c66658e685e94e2"},
+ {file = "watchdog-6.0.0-py3-none-win32.whl", hash = "sha256:07df1fdd701c5d4c8e55ef6cf55b8f0120fe1aef7ef39a1c6fc6bc2e606d517a"},
+ {file = "watchdog-6.0.0-py3-none-win_amd64.whl", hash = "sha256:cbafb470cf848d93b5d013e2ecb245d4aa1c8fd0504e863ccefa32445359d680"},
+ {file = "watchdog-6.0.0-py3-none-win_ia64.whl", hash = "sha256:a1914259fa9e1454315171103c6a30961236f508b9b623eae470268bbcc6a22f"},
+ {file = "watchdog-6.0.0.tar.gz", hash = "sha256:9ddf7c82fda3ae8e24decda1338ede66e1c99883db93711d8fb941eaa2d8c282"},
]
[package.extras]
@@ -2165,13 +2343,13 @@ watchmedo = ["PyYAML (>=3.10)"]
[[package]]
name = "werkzeug"
-version = "3.0.4"
+version = "3.1.3"
description = "The comprehensive WSGI web application library."
optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
files = [
- {file = "werkzeug-3.0.4-py3-none-any.whl", hash = "sha256:02c9eb92b7d6c06f31a782811505d2157837cea66aaede3e217c7c27c039476c"},
- {file = "werkzeug-3.0.4.tar.gz", hash = "sha256:34f2371506b250df4d4f84bfe7b0921e4762525762bbd936614909fe25cd7306"},
+ {file = "werkzeug-3.1.3-py3-none-any.whl", hash = "sha256:54b78bf3716d19a65be4fceccc0d1d7b89e608834989dfae50ea87564639213e"},
+ {file = "werkzeug-3.1.3.tar.gz", hash = "sha256:60723ce945c19328679790e3282cc758aa4a6040e4bb330f53d30fa546d44746"},
]
[package.dependencies]
@@ -2261,13 +2439,13 @@ files = [
[[package]]
name = "xarray"
-version = "2024.9.0"
+version = "2024.10.0"
description = "N-D labeled arrays and datasets in Python"
optional = false
python-versions = ">=3.10"
files = [
- {file = "xarray-2024.9.0-py3-none-any.whl", hash = "sha256:4fd534abdf12d5fa75dd566c56483d5081f77864462cf3d6ad53e13f9db48222"},
- {file = "xarray-2024.9.0.tar.gz", hash = "sha256:e796a6b3eaec11da24f33e4bb14af41897011660a0516fa4037d3ae4bbd1d378"},
+ {file = "xarray-2024.10.0-py3-none-any.whl", hash = "sha256:ae1d38cb44a0324dfb61e492394158ae22389bf7de9f3c174309c17376df63a0"},
+ {file = "xarray-2024.10.0.tar.gz", hash = "sha256:e369e2bac430e418c2448e5b96f07da4635f98c1319aa23cfeb3fbcb9a01d2e0"},
]
[package.dependencies]
@@ -2276,12 +2454,13 @@ packaging = ">=23.1"
pandas = ">=2.1"
[package.extras]
-accel = ["bottleneck", "flox", "numbagg", "opt-einsum", "scipy"]
-complete = ["xarray[accel,dev,io,parallel,viz]"]
-dev = ["hypothesis", "mypy", "pre-commit", "pytest", "pytest-cov", "pytest-env", "pytest-timeout", "pytest-xdist", "ruff", "xarray[complete]"]
+accel = ["bottleneck", "flox", "numba (>=0.54)", "numbagg", "opt-einsum", "scipy"]
+complete = ["xarray[accel,etc,io,parallel,viz]"]
+dev = ["hypothesis", "mypy", "pre-commit", "pytest", "pytest-cov", "pytest-env", "pytest-timeout", "pytest-xdist", "ruff", "sphinx", "sphinx-autosummary-accessors", "xarray[complete]"]
+etc = ["sparse"]
io = ["cftime", "fsspec", "h5netcdf", "netCDF4", "pooch", "pydap", "scipy", "zarr"]
parallel = ["dask[complete]"]
-viz = ["matplotlib", "nc-time-axis", "seaborn"]
+viz = ["cartopy", "matplotlib", "nc-time-axis", "seaborn"]
[[package]]
name = "xmltodict"
@@ -2297,4 +2476,4 @@ files = [
[metadata]
lock-version = "2.0"
python-versions = "^3.12"
-content-hash = "2b50ce87c7319b6207dd4580aba186df244a45a21fcf34daf808acf0ca2bc108"
+content-hash = "f23f8f81f98749abc04b7adaae503168707b49f305dc487e5755b24b4caacc54"
diff --git a/pyproject.toml b/pyproject.toml
index b6a9be8..feaf465 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -16,6 +16,8 @@ rich = "^13.7.1"
boto3 = "^1.35.22"
xarray = "^2024.09.0"
pyproj = "^3.7.0"
+jsonschema = "^4.23.0"
+check-jsonschema = "^0.29.4"
returns = "^0.23.0"
toolz = "^1.0.0"
diff --git a/src/nsidc/metgen/cli.py b/src/nsidc/metgen/cli.py
index 2e40446..55432e4 100644
--- a/src/nsidc/metgen/cli.py
+++ b/src/nsidc/metgen/cli.py
@@ -33,6 +33,16 @@ def info(config_filename):
metgen.init_logging(configuration)
configuration.show()
+@cli.command()
+@click.option('-c', '--config', 'config_filename', help='Path to configuration file', required=True)
+@click.option('-t', '--type', 'content_type', help='JSON content type', default='cnm', show_default=True)
+def validate(config_filename, content_type):
+ """Validates the contents of local JSON files."""
+ click.echo(metgen.banner())
+ configuration = config.configuration(config.config_parser_factory(config_filename), {})
+ metgen.init_logging(configuration)
+ metgen.validate(configuration, content_type)
+
@cli.command()
@click.option('-c', '--config', 'config_filename', help='Path to configuration file', required=True)
@click.option('-e', '--env', help='environment', default=constants.DEFAULT_CUMULUS_ENVIRONMENT, show_default=True)
diff --git a/src/nsidc/metgen/config.py b/src/nsidc/metgen/config.py
index 0fba2ab..499fd6c 100644
--- a/src/nsidc/metgen/config.py
+++ b/src/nsidc/metgen/config.py
@@ -3,6 +3,7 @@
from datetime import datetime, timezone
import logging
import os.path
+from pathlib import Path
import uuid
from nsidc.metgen import aws
@@ -39,6 +40,13 @@ def show(self):
for k,v in self.__dict__.items():
LOGGER.info(f' + {k}: {v}')
+ def ummg_path(self):
+ return Path(self.local_output_dir, self.ummg_dir)
+
+ def cnm_path(self):
+ return Path(self.local_output_dir, 'cnm')
+
+
def config_parser_factory(configuration_file):
"""
Returns a ConfigParser by reading the specified file.
diff --git a/src/nsidc/metgen/constants.py b/src/nsidc/metgen/constants.py
index 8cb48df..fcfa51b 100644
--- a/src/nsidc/metgen/constants.py
+++ b/src/nsidc/metgen/constants.py
@@ -7,6 +7,10 @@
DEFAULT_CHECKSUM_TYPE = 'SHA256'
DEFAULT_NUMBER = 1000000
+# JSON schema locations and versions
+CNM_JSON_SCHEMA = 'src/nsidc/metgen/json-schema/cumulus_sns_schema.json'
+CNM_JSON_SCHEMA_VERSION = '1.6.1'
+
# Configuration sections
SOURCE_SECTION_NAME = 'Source'
COLLECTION_SECTION_NAME = 'Collection'
diff --git a/src/nsidc/metgen/json-schema/cumulus_sns_schema.json b/src/nsidc/metgen/json-schema/cumulus_sns_schema.json
new file mode 100644
index 0000000..9d3bcb4
--- /dev/null
+++ b/src/nsidc/metgen/json-schema/cumulus_sns_schema.json
@@ -0,0 +1,276 @@
+{
+ "$schema": "http://json-schema.org/draft-07/schema#",
+ "definitions": {
+ "file": {
+ "type": "object",
+ "properties": {
+ "type": {
+ "description": "The type of file. science files (netcdf, HDF, binary) should use the 'data' type. More can be added if need and consensus demand.",
+ "type": "string",
+ "enum": [
+ "data",
+ "browse",
+ "metadata",
+ "ancillary",
+ "linkage"
+ ]
+ },
+ "subtype": {
+ "description": "An optional, specific implmentation of the file::type. e.g. NetCDF for a file of type 'data'",
+ "type": "string"
+ },
+ "uri": {
+ "description": "the URI of the file (s3://...)",
+ "type": "string"
+ },
+ "name": {
+ "description": "The human readable filename that this file represents. ",
+ "type": "string"
+ },
+ "checksumType": {
+ "description ": "Type of the checksum (e.g. md5). Optional. If no checksumType is defined for a file, it is assumed to be md5",
+ "type": "string",
+ "enum": [
+ "SHA512",
+ "SHA256",
+ "SHA2",
+ "SHA1",
+ "md5"
+ ]
+ },
+ "checksum": {
+ "description": "Checksum of the file.",
+ "type": "string"
+ },
+ "size": {
+ "description": "Size, in bytes, of the file.",
+ "type": "number"
+ }
+ },
+ "required": [
+ "type",
+ "uri",
+ "size",
+ "name"
+ ]
+ },
+ "filegroup": {
+ "type": "object",
+ "properties": {
+ "id": {
+ "type": "string",
+ "description": "string id of the filegroup by which all files are associated."
+ },
+ "files": {
+ "description": "array of files that make up this product",
+ "type": "array",
+ "items": {
+ "$ref": "#/definitions/file"
+ }
+ }
+ },
+ "required": [
+ "id",
+ "files"
+ ]
+ },
+ "collection": {
+ "description": "The collection short name and version.",
+ "type": "object",
+ "properties": {
+ "name": {
+ "type": "string",
+ "description": "collection short name."
+ },
+ "version": {
+ "type": "string",
+ "description": "collection version."
+ }
+ },
+ "required": [
+ "name",
+ "version"
+ ]
+ }
+ },
+ "title": "Cloud Notification Message (cnm) 1.2 ",
+ "description": "A message format to trigger or respond to processing. Version 1.2",
+ "type": "object",
+ "properties": {
+ "version": {
+ "description": "The CNM Version used. e.g. '1.3'",
+ "type": "string",
+ "enum": [
+ "1.0",
+ "1.1",
+ "1.2",
+ "1.3",
+ "1.4",
+ "1.4.1",
+ "1.5",
+ "1.5.1",
+ "1.6.0",
+ "1.6.1-alpha.0",
+ "1.6.1"
+ ]
+ },
+ "receivedTime": {
+ "description": "Time message was received by the ingest system",
+ "type": "string",
+ "format": "date-time"
+ },
+ "processCompleteTime": {
+ "description": "The time processing completed by the receiving entity.",
+ "type": "string",
+ "format": "date-time"
+ },
+ "submissionTime": {
+ "description": "The time the message was created (and presumably sent) to the publication mechanism.",
+ "type": "string",
+ "format": "date-time"
+ },
+ "identifier": {
+ "description": "Unique identifier for the message as a whole. It is the senders responsibility to ensure uniqueness. This identifier can be used in response messages to provide tracability.",
+ "type": "string"
+ },
+ "collection": {
+ "description": "The collection to which these granules will belong.",
+ "anyOf": [
+ {
+ "type": "string"
+ },
+ {
+ "$ref": "#/definitions/collection"
+ }
+ ]
+ },
+ "provider": {
+ "description": "the name of the provider (e.g. SIP, SDS, etc. ) producing these files.",
+ "type": "string"
+ },
+ "trace": {
+ "description": "Information on the message or who is sending it.",
+ "type": "string"
+ },
+ "response": {
+ "description": "The response message type sent. Can be a success message or error message. Akin to both the PAN and PDRD",
+ "type": "object",
+ "properties": {
+ "status": {
+ "description": "Successful or error.",
+ "type": "string",
+ "enum": [
+ "SUCCESS",
+ "FAILURE"
+ ]
+ },
+ "ingestionMetadata": {
+ "description": "Object defining ingestion metadata, like CMR Concept IDs, URLS, etc",
+ "type": "object",
+ "properties": {
+ "catalogId": {
+ "description": "Identifier for catalog",
+ "type": "string"
+ },
+ "catalogUrl": {
+ "description": "URL of catalog entry",
+ "type": "string"
+ }
+ }
+ },
+ "errorCode": {
+ "description": "Error message. Success messages can be ignored.",
+ "type": "string",
+ "enum": [
+ "VALIDATION_ERROR",
+ "PROCESSING_ERROR",
+ "TRANSFER_ERROR"
+ ]
+ },
+ "errorMessage": {
+ "description": "The message error for the failure that occured.",
+ "type": "string"
+ }
+ },
+ "required": [
+ "status"
+ ]
+ },
+ "product": {
+ "type": "object",
+ "properties": {
+ "name": {
+ "description": "Identifier/name of the product",
+ "type": "string"
+ },
+ "dataVersion": {
+ "description": "Version of this product",
+ "type": "string"
+ },
+ "dataProcessingType": {
+ "description": "The type of data processing stream that generated the product",
+ "type": "string",
+ "enum": [
+ "forward",
+ "reprocessing"
+ ]
+ },
+ "files": {
+ "description": "array of files that make up this product",
+ "type": "array",
+ "items": {
+ "$ref": "#/definitions/file"
+ }
+ },
+ "filegroups": {
+ "description": "array of filegroups that make up this product",
+ "type": "array",
+ "items": {
+ "$ref": "#/definitions/filegroup"
+ }
+ }
+ },
+ "oneOf": [
+ {
+ "required": [
+ "name",
+ "files"
+ ]
+ },
+ {
+ "required": [
+ "name",
+ "filegroups"
+ ]
+ }
+ ]
+ }
+ },
+ "oneOf": [
+ {
+ "required": [
+ "version",
+ "submissionTime",
+ "collection",
+ "identifier",
+ "product"
+ ],
+ "not": {
+ "required": [
+ "response"
+ ]
+ }
+ },
+ {
+ "required": [
+ "version",
+ "receivedTime",
+ "processCompleteTime",
+ "submissionTime",
+ "identifier",
+ "collection",
+ "response"
+ ]
+ }
+ ]
+}
diff --git a/src/nsidc/metgen/metgen.py b/src/nsidc/metgen/metgen.py
index 4af71d9..ea1c34f 100644
--- a/src/nsidc/metgen/metgen.py
+++ b/src/nsidc/metgen/metgen.py
@@ -3,6 +3,7 @@
import datetime as dt
import hashlib
import json
+import jsonschema
import logging
import os.path
import sys
@@ -42,7 +43,7 @@ def init_logging(configuration: config.Config):
console_handler.setFormatter(logging.Formatter(CONSOLE_FORMAT))
logger.addHandler(console_handler)
- logfile_handler = logging.FileHandler("metgenc.log", "w")
+ logfile_handler = logging.FileHandler("metgenc.log", "a")
logfile_handler.setLevel(logging.DEBUG)
logfile_handler.setFormatter(logging.Formatter(LOGFILE_FORMAT))
logger.addHandler(logfile_handler)
@@ -291,8 +292,9 @@ def granule_collection(configuration: config.Config, granule: Granule) -> Granul
"""
Find the Granule's Collection and add it to the Granule.
"""
- # TODO: When we start querying CMR, don't do this operation repeatedly;
- # we only need to get a Collection once.
+ # TODO: When we start querying CMR, refactor the pipeline to retrieve
+ # collection information from CMR once, then associate it with each
+ # granule.
return dataclasses.replace(
granule,
collection=Collection(configuration.auth_id, configuration.version)
@@ -309,11 +311,7 @@ def prepare_granule(configuration: config.Config, granule: Granule) -> Granule:
)
def find_existing_ummg(configuration: config.Config, granule: Granule) -> Granule:
- ummg_filename = Path(
- configuration.local_output_dir,
- configuration.ummg_dir,
- granule.producer_granule_id + '.json'
- )
+ ummg_filename = configuration.ummg_path().joinpath(granule.producer_granule_id + '.json')
if ummg_filename.exists():
return dataclasses.replace(granule, ummg_filename=ummg_filename)
@@ -328,9 +326,7 @@ def create_ummg(configuration: config.Config, granule: Granule) -> Granule:
if granule.ummg_filename != Maybe.empty and not configuration.overwrite_ummg:
return granule
- ummg_path = Path(configuration.local_output_dir, configuration.ummg_dir)
- ummg_file = granule.producer_granule_id + '.json'
- ummg_file_path = os.path.join(ummg_path, ummg_file)
+ ummg_file_path = configuration.ummg_path().joinpath(granule.producer_granule_id + '.json')
# Populated metadata_details dict looks like:
# {
@@ -384,17 +380,9 @@ def create_cnm(configuration: config.Config, granule: Granule) -> Granule:
"""
Create a CNM submission message for the Granule.
"""
- # Break up the JSON string into its components so information about multiple files is
- # easier to add.
+ files_template = cnms_files_template()
body_template = cnms_body_template()
- body_content = body_template.safe_substitute(
- dataclasses.asdict(granule)
- | dataclasses.asdict(granule.collection)
- | dataclasses.asdict(configuration)
- )
- body_json = json.loads(body_content)
-
- file_template = cnms_files_template()
+ populated_file_templates = []
granule_files = {
'data': granule.data_filenames,
@@ -402,13 +390,21 @@ def create_cnm(configuration: config.Config, granule: Granule) -> Granule:
}
for type, files in granule_files.items():
for file in files:
- values = cnms_file_json_parts(configuration.staging_bucket_name, granule, file, type)
- file_json = file_template.safe_substitute(values)
- body_json['product']['files'].append(json.loads(file_json))
+ populated_file_templates.append(json.loads(files_template.safe_substitute(
+ cnms_file_json_parts(configuration.staging_bucket_name,
+ granule,
+ file,
+ type))))
return dataclasses.replace(
granule,
- cnm_message=json.dumps(body_json)
+ cnm_message = body_template.safe_substitute(
+ dataclasses.asdict(granule)
+ | dataclasses.asdict(granule.collection)
+ | dataclasses.asdict(configuration)
+ | { 'file_content': json.dumps(populated_file_templates),
+ 'cnm_schema_version': constants.CNM_JSON_SCHEMA_VERSION }
+ )
)
def write_cnm(configuration: config.Config, granule: Granule) -> Granule:
@@ -416,7 +412,7 @@ def write_cnm(configuration: config.Config, granule: Granule) -> Granule:
Write a CNM message to a file.
"""
if configuration.write_cnm_file:
- cnm_file = os.path.join(configuration.local_output_dir, 'cnm', granule.producer_granule_id + '.cnm.json')
+ cnm_file = configuration.cnm_path().joinpath(granule.producer_granule_id + '.cnm.json')
with open(cnm_file, "tw") as f:
print(granule.cnm_message, file=f)
return granule
@@ -425,14 +421,6 @@ def publish_cnm(configuration: config.Config, granule: Granule) -> Granule:
"""
Publish a CNM message to a Kinesis stream.
"""
- if configuration.write_cnm_file:
- cnm_file = os.path.join(
- configuration.local_output_dir,
- 'cnm',
- granule.producer_granule_id + '.cnm.json'
- )
- with open(cnm_file, "tw") as f:
- print(granule.cnm_message, file=f)
stream_name = configuration.kinesis_stream_name
aws.post_to_kinesis(stream_name, granule.cnm_message)
return granule
@@ -579,3 +567,50 @@ def initialize_template(file):
template_str = template_file.read()
return Template(template_str)
+
+def validate(configuration, content_type):
+ """
+ Validate local JSON files
+ """
+ output_file_path = file_type_path(configuration, content_type)
+ schema_file = schema_file_path(content_type)
+
+ logger = logging.getLogger('metgenc')
+ logger.info('')
+ logger.info(f"Validating files in {output_file_path}...")
+ with open(schema_file) as sf:
+ schema = json.load(sf)
+
+ # loop through all files and validate each one
+ for json_file in output_file_path.glob('*.json'):
+ apply_schema(schema, json_file)
+
+ logger.info("Validations complete.")
+ return True
+
+def file_type_path(configuration, content_type):
+ match content_type:
+ case 'cnm':
+ return configuration.cnm_path()
+ case _:
+ return ''
+
+def schema_file_path(content_type):
+ match content_type:
+ case 'cnm':
+ return constants.CNM_JSON_SCHEMA
+ case _:
+ return ''
+
+def apply_schema(schema, json_file):
+ logger = logging.getLogger('metgenc')
+ with open(json_file) as jf:
+ json_content = json.load(jf)
+ try:
+ jsonschema.validate(instance=json_content, schema=schema)
+ logger.info(f"Validated {json_file}")
+ except jsonschema.exceptions.ValidationError as err:
+ logger.error(f'Validation failed for "{err.validator}" in {json_file}: {err.validator_value}')
+
+ return True
+
diff --git a/src/nsidc/metgen/templates/cnm_body_template.json b/src/nsidc/metgen/templates/cnm_body_template.json
index 707cfb5..8221c9f 100644
--- a/src/nsidc/metgen/templates/cnm_body_template.json
+++ b/src/nsidc/metgen/templates/cnm_body_template.json
@@ -1,5 +1,5 @@
{
- "version": "1.5.1",
+ "version": "$cnm_schema_version",
"submissionTime": "$submission_time",
"identifier": "$uuid",
"collection": "$auth_id",
@@ -7,6 +7,6 @@
"product": {
"name": "$producer_granule_id",
"dataVersion": "$version",
- "files": []
+ "files": $file_content
}
}
diff --git a/tests/test_metgen.py b/tests/test_metgen.py
index d3f8169..f04ccf2 100644
--- a/tests/test_metgen.py
+++ b/tests/test_metgen.py
@@ -100,24 +100,6 @@ def test_s3_url_simple_case():
expected = 's3://xyzzy-bucket/external/ABCD/2/abcd-1234/xyzzy.bin'
assert metgen.s3_url(staging_bucket_name, granule, 'xyzzy.bin') == expected
-@patch('nsidc.metgen.metgen.scrub_json_files')
-def test_does_scrub_ummg(scrub_mock, fake_config):
- fake_config.overwrite_ummg = True
- metgen.prepare_output_dirs(fake_config)
- assert scrub_mock.called
-
-@patch('nsidc.metgen.metgen.scrub_json_files')
-def test_keeps_existing_ummg(scrub_mock, fake_config):
- fake_config.overwrite_ummg = False
- metgen.prepare_output_dirs(fake_config)
- assert not scrub_mock.called
-
-@patch('nsidc.metgen.metgen.scrub_json_files')
-def test_builds_output_paths(scrub_mock, fake_config):
- ummg_path, cnm_path = metgen.prepare_output_dirs(fake_config)
- assert str(ummg_path) == '/'.join([fake_config.local_output_dir, fake_config.ummg_dir])
- assert str(cnm_path) == '/'.join([fake_config.local_output_dir, 'cnm'])
-
@patch("nsidc.metgen.metgen.dt.datetime")
def test_start_ledger(mock_datetime):
now = dt.datetime(2099, 7, 4, 10, 11, 12)