diff --git a/src/patterns/dosdp-dev/abnormallyDecreasedWetnessOfAnatomicalEntity.yaml b/src/patterns/dosdp-dev/abnormallyDecreasedWetnessOfAnatomicalEntity.yaml new file mode 100644 index 00000000..25e7eef8 --- /dev/null +++ b/src/patterns/dosdp-dev/abnormallyDecreasedWetnessOfAnatomicalEntity.yaml @@ -0,0 +1,87 @@ +--- +pattern_name: abnormallyDecreasedWetnessOfAnatomicalEntity + +pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormallyDecreasedWetnessOfAnatomicalEntity.yaml + +description: "Use this phenotype pattern when an anatomical entity exhibits + decreased liquid coverage, for example, when the aqueous or oily layer on its + surface is reduced. Consider the alternative 'PATO:0001801 decreased water + composition' phenotype pattern when the water contained in an entity is + reduced as opposed to a reduced amount of liquid on its surface." + +# examples: +# - http://purl.obolibrary.org/obo/PATO_0001824 # http://purl.obolibrary.org/obo/HP_0000217 Xerostomia +# - http://purl.obolibrary.org/obo/PATO_0001824 # http://purl.obolibrary.org/obo/HP_0011359 Dry hair +# - http://purl.obolibrary.org/obo/PATO_0001824 # http://purl.obolibrary.org/obo/MP_0000624 xerostomia +# - http://purl.obolibrary.org/obo/PATO_0001824 # http://purl.obolibrary.org/obo/MP_0001337 dry eyes +# - http://purl.obolibrary.org/obo/MP_0003536 # vagina dryness + +contributors: + - https://orcid.org/0000-0001-8314-2140 # Ray Stefancsik + - https://orcid.org/0000-0003-4606-0597 # Susan Bello + - https://orcid.org/0000-0002-6490-7723 # Anna V. Anagnostopoulos + - https://orcid.org/0000-0002-4142-7153 # Sabrina Toro + - https://orcid.org/0000-0001-7941-2961 # Leigh Carmody + +classes: + decreased_surface_wetness: PATO:0001826 + abnormal: PATO:0000460 + anatomical_entity: UBERON:0001062 + +relations: + characteristic_of: RO:0000052 + has_modifier: RO:0002573 + has_part: BFO:0000051 + +annotationProperties: + exact_synonym: oio:hasExactSynonym + related_synonym: oio:hasRelatedSynonym + +vars: + anatomical_entity: "'anatomical_entity'" + +name: + text: "decreased surface wetness of %s" + vars: + - anatomical_entity + +annotations: + - annotationProperty: exact_synonym + text: "decreased wetness of %s" + vars: + - anatomical_entity + + - annotationProperty: exact_synonym + text: "decreased %s surface wetness" + vars: + - anatomical_entity + + - annotationProperty: exact_synonym + text: "decreased %s wetness" + vars: + - anatomical_entity + + - annotationProperty: related_synonym + text: "%s dryness" + vars: + - anatomical_entity + + - annotationProperty: related_synonym + text: "dry %s" + vars: + - anatomical_entity + +def: + text: "A relatively low wetness on the surface of %s." + vars: + - anatomical_entity + +equivalentTo: + text: "'has_part' some ( + 'decreased_surface_wetness' and + ('characteristic_of' some %s) and + ('has_modifier' some 'abnormal') + )" + vars: + - anatomical_entity +...