From b2e5f998b967b0dc745d42845f080f30d94044fd Mon Sep 17 00:00:00 2001
From: Daniel-Olson <danny.olson@hotmail.com>
Date: Thu, 2 Mar 2023 15:07:03 -0700
Subject: [PATCH 1/3] Create attributeSeverity.yaml

Add attributeSeverity.yaml as a new pattern.
---
 src/patterns/dosdp-dev/attributeSeverity.yaml | 50 +++++++++++++++++++
 1 file changed, 50 insertions(+)
 create mode 100644 src/patterns/dosdp-dev/attributeSeverity.yaml

diff --git a/src/patterns/dosdp-dev/attributeSeverity.yaml b/src/patterns/dosdp-dev/attributeSeverity.yaml
new file mode 100644
index 00000000..ec48f1e8
--- /dev/null
+++ b/src/patterns/dosdp-dev/attributeSeverity.yaml
@@ -0,0 +1,50 @@
+pattern_name: attributeSeverity
+pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/attributeSeverity.yaml
+description: "This pattern is meant to describe the severity of biological attributes, such as 'severe lack of lower limb coordination efficacy'."
+
+contributors:
+- https://orcid.org/0000-0001-5208-3432
+- https://orcid.org/0000-0002-7356-1779
+- https://orcid.org/0000-0001-5839-2535
+- https://orcid.org/0000-0002-2389-9288
+
+classes:
+  trait: OBA:0000001
+  intensity: PATO:0000049
+  abnormal: PATO:0000460
+
+relations:
+  has_modifier: RO:0002573
+  has_part: BFO:0000051
+
+annotationProperties:
+  exact_synonym: oio:hasExactSynonym
+
+vars:
+  attribute: "'trait'"
+  severity: "'intensity'"
+
+name:
+  text: "%s, %s"
+  vars:
+  - attribute
+  - severity
+
+annotations:
+- annotationProperty: exact_synonym
+  text: "%s %s"
+  vars:
+  - severity
+  - attribute
+
+def:
+  text: "A form of %s that is abnormal with %s."
+  vars:
+  - attribute
+  - severity
+
+equivalentTo:
+  text: "'has_part' some (%s and ('has_modifier' some ('abnormal' and ('has_modifier' some %s))))"
+  vars:
+  - attribute
+  - severity

From 9eb5c34950f0e18b6d2bed79af1b048225ef6ba6 Mon Sep 17 00:00:00 2001
From: Daniel-Olson <danny.olson@hotmail.com>
Date: Mon, 13 Mar 2023 12:22:45 -0700
Subject: [PATCH 2/3] Updated Label

The preferred label is:
abnormal attribute, intensity
for example: abnormal ankle joint functionality, moderate intensity
---
 src/patterns/dosdp-dev/attributeSeverity.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/patterns/dosdp-dev/attributeSeverity.yaml b/src/patterns/dosdp-dev/attributeSeverity.yaml
index ec48f1e8..b5d2a3af 100644
--- a/src/patterns/dosdp-dev/attributeSeverity.yaml
+++ b/src/patterns/dosdp-dev/attributeSeverity.yaml
@@ -25,7 +25,7 @@ vars:
   severity: "'intensity'"
 
 name:
-  text: "%s, %s"
+  text: "abnormal %s, %s"
   vars:
   - attribute
   - severity

From a746bb93f40141e8656e9870c24ee3adab19aa2c Mon Sep 17 00:00:00 2001
From: Daniel-Olson <danny.olson@hotmail.com>
Date: Mon, 13 Mar 2023 12:50:09 -0700
Subject: [PATCH 3/3] Added contributor ORCID

Forgot an ORCID so I added it.
---
 src/patterns/dosdp-dev/attributeSeverity.yaml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/src/patterns/dosdp-dev/attributeSeverity.yaml b/src/patterns/dosdp-dev/attributeSeverity.yaml
index b5d2a3af..7b7733f1 100644
--- a/src/patterns/dosdp-dev/attributeSeverity.yaml
+++ b/src/patterns/dosdp-dev/attributeSeverity.yaml
@@ -7,6 +7,7 @@ contributors:
 - https://orcid.org/0000-0002-7356-1779
 - https://orcid.org/0000-0001-5839-2535
 - https://orcid.org/0000-0002-2389-9288
+- https://orcid.org/0000-0002-8134-1207
 
 classes:
   trait: OBA:0000001