diff --git a/README.md b/README.md
index 3a22c79..a07c965 100644
--- a/README.md
+++ b/README.md
@@ -33,4 +33,9 @@ There has been no methodical V&V on this converter; use at your own risk!
There are several known and many unknown limitations of this tool. It is in a
preliminary state and subject to considerable redesign, including the addition
-of a backend for other CAD engines.
\ No newline at end of file
+of a backend for other CAD engines.
+
+Specific Limitations:
+
+ - general Cones are not handled
+ - Torii are required to have a single minor radius, OpenMC allows for different minor radii orthogonal to the toroidal axis
\ No newline at end of file
diff --git a/src/openmc_cad_adapter/cubit_util.py b/src/openmc_cad_adapter/cubit_util.py
new file mode 100644
index 0000000..81be7a0
--- /dev/null
+++ b/src/openmc_cad_adapter/cubit_util.py
@@ -0,0 +1,28 @@
+_CUBIT_ID = 1
+
+
+def reset_cubit_ids():
+ global _CUBIT_ID
+ _CUBIT_ID = 1
+
+
+def lastid():
+ global _CUBIT_ID
+ id_out = _CUBIT_ID
+ _CUBIT_ID += 1
+ return id_out
+
+
+def new_variable():
+ idn = lastid()
+ return f"id{idn}"
+
+
+def emit_get_last_id(type="body", cmds=None):
+ idn = lastid()
+ ids = f"id{idn}"
+ if cmds is not None:
+ cmds.append(f'#{{ {ids} = Id("{type}") }}')
+ else:
+ print('Warning: cmds is None')
+ return ids
diff --git a/src/openmc_cad_adapter/geom_util.py b/src/openmc_cad_adapter/geom_util.py
new file mode 100644
index 0000000..d54785a
--- /dev/null
+++ b/src/openmc_cad_adapter/geom_util.py
@@ -0,0 +1,42 @@
+import math
+import numpy as np
+
+def vector_to_euler_xyz(v):
+ v = np.asarray(v)
+ v /= np.linalg.norm(v)
+
+ x, y, z = v
+
+ xy_norm = math.sqrt(x**2 + y**2)
+
+ theta = np.arctan2(z, xy_norm)
+ # if z component is zero, vector is in the xy plane
+ if z == 0:
+ theta = np.pi / 2
+ phi = np.arctan2(y, x)
+
+ # Ensure angles are within [0, 2*pi] range
+ phi %= (2 * math.pi)
+ theta %= (2 * math.pi)
+
+ oe = 180 / math.pi
+ return phi * oe, theta * oe, 0.0
+
+
+def rotate(id, x, y, z, cmds):
+ if nonzero(x, y, z):
+ phi, theta, psi = vector_to_euler_xyz((x, y, z))
+ cmds.append(f"body {{ {id} }} rotate {theta} about Y")
+ cmds.append(f"body {{ {id} }} rotate {phi} about Z")
+ # cmds.append(f"body {{ {id} }} rotate {phi} about Z")
+ # cmds.append(f"body {{ {id} }} rotate {theta} about Y")
+ # cmds.append(f"body {{ {id} }} rotate {psi} about X")
+
+
+def nonzero(*args):
+ return any(arg != 0 for arg in args)
+
+
+def move( id, x, y, z, cmds):
+ if nonzero( x, y, z ):
+ cmds.append(f"body {{ {id} }} move {x} {y} {z}")
\ No newline at end of file
diff --git a/src/openmc_cad_adapter/gqs.py b/src/openmc_cad_adapter/gqs.py
new file mode 100644
index 0000000..585489c
--- /dev/null
+++ b/src/openmc_cad_adapter/gqs.py
@@ -0,0 +1,136 @@
+import numpy as np
+
+
+ELLIPSOID = 1
+ONE_SHEET_HYPERBOLOID = 2
+TWO_SHEET_HYPERBOLOID = 3
+ELLIPTIC_CONE = 4
+ELLIPTIC_PARABOLOID = 5
+HYPERBOLIC_PARABOLOID = 6
+ELLIPTIC_CYLINDER = 7
+HYPERBOLIC_CYLINDER = 8
+PARABOLIC_CYLINDER = 9
+
+
+def characterize_general_quadratic( surface ): #s surface
+ gq_tol = 1e-6
+ equivalence_tol = 1e-8
+ a = surface.coefficients['a']
+ b = surface.coefficients['b']
+ c = surface.coefficients['c']
+ d = surface.coefficients['d']
+ e = surface.coefficients['e']
+ f = surface.coefficients['f']
+ g = surface.coefficients['g']
+ h = surface.coefficients['h']
+ j = surface.coefficients['j']
+ k = surface.coefficients['k']
+ #coefficient matrix
+ Aa = np.matrix([
+ [a, d/2, f/2],
+ [d/2, b, e/2],
+ [f/2, e/2, c]])
+ #hessian matrix
+ Ac = np.matrix([
+ [a, d/2, f/2, g/2],
+ [d/2, b, e/2, h/2],
+ [f/2, e/2, c, j/2],
+ [g/2, h/2, j/2, k]])
+ rank_Aa = matrix_rank( Aa )
+ rank_Ac = matrix_rank( Ac )
+
+ det_Ac = np.linalg.det(Ac)
+ if np.abs( det_Ac ) < gq_tol:
+ delta = 0
+ else:
+ delta = -1 if det_Ac < 0 else -1
+ eigen_results = np.linalg.eig(Aa);
+ signs = np.array([ 0, 0, 0 ])
+ for i in range( 0, 3 ):
+ if eigen_results.eigenvalues[ i ] > -1 * gq_tol:
+ signs[i] = 1
+ else:
+ signs[i] = -1
+
+ S = 1 if np.abs( signs.sum() ) == 3 else -1
+
+ B = np.array([[ -g/2], [-h/2], [-j/2 ]])
+
+ Aai = np.linalg.pinv( Aa )
+
+ C = Aai * B
+
+ dx = C[0]
+ dy = C[1]
+ dz = C[2]
+
+ #Update the constant using the resulting translation
+ K_ = k + g/2*dx + h/2*dy + j/2*dz
+
+ if rank_Aa == 2 and rank_Ac == 3 and S == 1:
+ delta = -1 if K_ * signs[0] else 1
+
+ D = -1 if K_ * signs[0] else 1
+
+
+ def find_type( rAa, rAc, delta, S, D ):
+ if 3 == rAa and 4 == rAc and -1 == delta and 1 == S:
+ return ELLIPSOID
+ elif 3 == rAa and 4 == rAc and 1 == delta and -1 == S:
+ return ONE_SHEET_HYPERBOLOID
+ elif 3 == rAa and 4 == rAc and -1 == delta and -1 == S:
+ return TWO_SHEET_HYPERBOLOID
+ elif 3 == rAa and 3 == rAc and 0 == delta and -1 == S:
+ return ELLIPTIC_CONE
+ elif 2 == rAa and 4 == rAc and -1 == delta and 1 == S:
+ return ELLIPTIC_PARABOLOID
+ elif 2 == rAa and 4 == rAc and 1 == delta and -1 == S:
+ return HYPERBOLIC_PARABOLOID
+ elif 2 == rAa and 3 == rAc and -1 == delta and 1 == S:
+ return ELLIPTIC_CYLINDER
+ elif 2 == rAa and 3 == rAc and 0 == delta and -1 == S:
+ return HYPERBOLIC_CYLINDER
+ elif 2 == rAa and 3 == rAc and 0 == delta and 1 == S:
+ return PARABOLIC_CYLINDER
+ elif 2 == rAa and 3 == rAc and 1 == S and D != 0 :
+ return find_type( rAa, rAc, D, S, 0 )
+ else:
+ raise "UNKNOWN QUADRATIC"
+
+ gq_type = find_type( rank_Aa, rank_Ac, delta, S, D )
+
+ #set the translation
+ translation = C
+
+ rotation_matrix = eigen_results.eigenvectors
+ eigenvalues = eigen_results.eigenvalues
+
+ for i in range( 0, 3 ):
+ if abs(eigenvalues[i]) < gq_tol:
+ eigenvalues[i] = 0
+
+ A_ = eigenvalues[0]
+ B_ = eigenvalues[1]
+ C_ = eigenvalues[2];
+ D_ = 0; E_ = 0; F_ = 0;
+ G_ = 0; H_ = 0; J_ = 0;
+ if gq_type == ONE_SHEET_HYPERBOLOID:
+ if abs( K_) < equivalence_tol:
+ K_ = 0
+ return ELLIPTIC_CONE
+ if gq_type == TWO_SHEET_HYPERBOLOID:
+ if abs( K_) < equivalence_tol:
+ K_ = 0
+ return ELLIPTIC_CONE
+ if gq_type == ELLIPSOID:
+ if abs( A_) < equivalence_tol:
+ A_ = 0
+ return ELLIPTIC_CYLINDER
+ elif abs( B_) < equivalence_tol:
+ B_ = 0
+ return ELLIPTIC_CYLINDER
+ elif abs( C_) < equivalence_tol:
+ C_ = 0
+ return ELLIPTIC_CYLINDER
+ else:
+ return (gq_type, A_, B_, C_, K_, translation, rotation_matrix)
\ No newline at end of file
diff --git a/src/openmc_cad_adapter/surfaces.py b/src/openmc_cad_adapter/surfaces.py
new file mode 100644
index 0000000..71c3d27
--- /dev/null
+++ b/src/openmc_cad_adapter/surfaces.py
@@ -0,0 +1,436 @@
+from abc import ABC, abstractmethod
+import sys
+import math
+import warnings
+
+import numpy as np
+import openmc
+
+from .cubit_util import emit_get_last_id, lastid
+from .geom_util import move, rotate
+
+def indent(indent_size):
+ return ' ' * (2*indent_size)
+
+
+class CADSurface(ABC):
+
+ def to_cubit_surface(self, ent_type, node, extents, inner_world=None, hex=False):
+ ids, cmds = self.to_cubit_surface_inner(ent_type, node, extents, inner_world, hex)
+ # TODO: Add boundary condition to the correct surface(s)
+ # cmds += self.boundary_condition(ids)
+ return ids, cmds
+
+ @abstractmethod
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ raise NotImplementedError
+
+ def boundary_condition(self, cad_surface_ids):
+ if self.boundary_type == 'transmission':
+ return []
+ cmds = []
+ cmds.append(f'group \"boundary:{self.boundary_type}\" add surface {cad_surface_ids[2:]}')
+ return cmds
+
+ @classmethod
+ def from_openmc_surface(cls, surface):
+ with warnings.catch_warnings() as w:
+ warnings.simplefilter("ignore")
+ return cls.from_openmc_surface_inner(surface)
+
+ @classmethod
+ @abstractmethod
+ def from_openmc_surface_inner(cls, surface):
+ raise NotImplementedError
+
+
+class CADPlane(CADSurface, openmc.Plane):
+
+ @staticmethod
+ def lreverse(node):
+ return "" if node.side == '-' else "reverse"
+
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ cmds = []
+
+ n = np.array([self.coefficients[k] for k in ('a', 'b', 'c')])
+ cd = self.coefficients['d']
+ maxv = sys.float_info.min
+ for i, v in enumerate(n):
+ if abs(v) > maxv:
+ maxv = v
+
+ ns = cd * n
+
+ cmds.append( f"create surface rectangle width { 2*extents[0] } zplane")
+ sur, cmd = emit_get_last_id( "surface" )
+ cmds.append(cmd)
+ surf, cmd = emit_get_last_id( "body" )
+
+ n = n/np.linalg.norm(n)
+ ns = cd * n
+ zn = np.array([ 0, 0, 1 ])
+ n3 = np.cross(n, zn)
+ dot = np.dot(n, zn)
+ cmds.append(f"# n3 {n3[0]} {n3[1]} {n3[2]}")
+ degs = math.degrees(math.acos(np.dot(n, zn)))
+ y = np.linalg.norm(n3)
+ x = dot
+ angle = - math.degrees(math.atan2( y, x ))
+ if n3[0] != 0 or n3[1] != 0 or n3[2] != 0:
+ cmds.append(f"Rotate body {{ {surf} }} about 0 0 0 direction {n3[0]} {n3[1]} {n3[2]} Angle {angle}")
+ cmds.append(f"body {{ { surf } }} move {ns[0]} {ns[1]} {ns[2]}")
+ cmds.append(f"brick x {extents[0]} y {extents[1]} z {extents[2]}" )
+ ids = emit_get_last_id( ent_type )
+ cmds.append(f"section body {{ {ids} }} with surface {{ {sur} }} {self.lreverse(node)}")
+ cmds.append(f"del surface {{ {sur} }}")
+
+ cmds += self.boundary_condition(ids)
+ return ids, cmds
+
+ @classmethod
+ def from_openmc_surface_inner(cls, plane):
+ return cls(plane.a, plane.b, plane.c, plane.d, plane.boundary_type, plane.albedo, plane.name, plane.id)
+
+
+class CADXPlane(CADSurface, openmc.XPlane):
+
+ @staticmethod
+ def reverse(node):
+ return "reverse" if node.side == '-' else ""
+
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ cad_cmds = []
+ cad_cmds.append(f"brick x {extents[0]} y {extents[1]} z {extents[2]}")
+ ids = emit_get_last_id( ent_type, cad_cmds)
+ cad_cmds.append(f"section body {{ {ids} }} with xplane offset {self.coefficients['x0']} {self.reverse(node)}")
+ return ids, cad_cmds
+
+ @classmethod
+ def from_openmc_surface_inner(cls, plane):
+ return cls(x0=plane.x0, boundary_type=plane.boundary_type, albedo=plane.albedo, name=plane.name, surface_id=plane.id)
+
+
+class CADYPlane(CADSurface, openmc.YPlane):
+
+ @staticmethod
+ def reverse(node):
+ return "reverse" if node.side == '-' else ""
+
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ cad_cmds = []
+ cad_cmds.append(f"brick x {extents[0]} y {extents[1]} z {extents[2]}")
+ ids = emit_get_last_id( ent_type, cad_cmds)
+ cad_cmds.append(f"section body {{ {ids} }} with yplane offset {self.coefficients['y0']} {self.reverse(node)}")
+ return ids, cad_cmds
+
+ @classmethod
+ def from_openmc_surface_inner(cls, plane):
+ return cls(y0=plane.y0, boundary_type=plane.boundary_type, albedo=plane.albedo, name=plane.name, surface_id=plane.id)
+
+
+class CADZPlane(CADSurface, openmc.ZPlane):
+
+ @staticmethod
+ def reverse(node):
+ return "reverse" if node.side == '-' else ""
+
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ cad_cmds = []
+ cad_cmds.append(f"brick x {extents[0]} y {extents[1]} z {extents[2]}")
+ ids = emit_get_last_id( ent_type, cad_cmds)
+ cad_cmds.append(f"section body {{ {ids} }} with zplane offset {self.coefficients['z0']} {self.reverse(node)}")
+ return ids, cad_cmds
+
+ @classmethod
+ def from_openmc_surface_inner(cls, plane):
+ return cls(z0=plane.z0, boundary_type=plane.boundary_type, albedo=plane.albedo, name=plane.name, surface_id=plane.id)
+
+class CADCylinder(CADSurface, openmc.Cylinder):
+
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ print('XCADCylinder to cubit surface')
+ cad_cmds = []
+ h = inner_world[2] if inner_world else extents[2]
+ cad_cmds.append(f"cylinder height {h} radius {self.r}")
+ ids = emit_get_last_id(cmds=cad_cmds)
+ if node.side != '-':
+ wid = 0
+ if inner_world:
+ if hex:
+ cad_cmds.append(f"create prism height {inner_world[2]} sides 6 radius { ( inner_world[0] / 2 ) }")
+ wid = emit_get_last_id(ent_type, cad_cmds)
+ cad_cmds.append(f"rotate body {{ {wid} }} about z angle 30")
+ else:
+ cad_cmds.append(f"brick x {inner_world[0]} y {inner_world[1]} z {inner_world[2]}")
+ wid = emit_get_last_id(ent_type, cad_cmds)
+ else:
+ cad_cmds.append( f"brick x {w[0]} y {w[1]} z {w[2]}" )
+ wid = emit_get_last_id(ent_type, cad_cmds)
+ cad_cmds.append( f"subtract body {{ { ids } }} from body {{ { wid } }}" )
+ rotate( wid, self.dx, self.dy, self.dz, cad_cmds)
+ move( wid, self.x0, self.y0, self.z0, cad_cmds)
+ return wid, cad_cmds
+ rotate( ids, self.dx, self.dy, self.dz, cad_cmds)
+ move( ids, self.x0, self.y0, self.z0, cad_cmds)
+ return ids, cad_cmds
+
+ @classmethod
+ def from_openmc_surface_inner(cls, cyl):
+ return cls(r=cyl.r, x0=cyl.x0, y0=cyl.y0, z0=cyl.z0, dx=cyl.dx, dy=cyl.dy, dz=cyl.dz,
+ boundary_type=cyl.boundary_type, albedo=cyl.albedo, name=cyl.name, surface_id=cyl.id)
+
+class CADXCylinder(CADSurface, openmc.XCylinder):
+
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ cad_cmds = []
+ h = inner_world[0] if inner_world else extents[0]
+ cad_cmds.append( f"cylinder height {h} radius {self.r}")
+ ids = emit_get_last_id( ent_type , cad_cmds)
+ cad_cmds.append(f"rotate body {{ {ids} }} about y angle 90")
+ if node.side != '-':
+ wid = 0
+ if inner_world:
+ if hex:
+ cad_cmds.append(f"create prism height {inner_world[2]} sides 6 radius { ( inner_world[0] / 2 ) }")
+ wid = emit_get_last_id(ent_type, cad_cmds)
+ cad_cmds.append(f"rotate body {{ {wid} }} about z angle 30")
+ cad_cmds.append(f"rotate body {{ {wid} }} about y angle 90")
+ else:
+ cad_cmds.append(f"brick x {inner_world[0]} y {inner_world[1]} z {inner_world[2]}")
+ wid = emit_get_last_id(ent_type, cad_cmds)
+ else:
+ cad_cmds.append( f"brick x {extents[0]} y {extents[1]} z {extents[2]}" )
+ wid = emit_get_last_id( ent_type , cad_cmds)
+ cad_cmds.append(f"subtract body {{ { ids } }} from body {{ { wid } }}")
+ move(wid, 0, self.y0, self.z0, cad_cmds)
+ return wid, cad_cmds
+ move(ids, 0, self.y0, self.z0, cad_cmds)
+ return ids, cad_cmds
+
+ @classmethod
+ def from_openmc_surface_inner(cls, cyl):
+ return cls(r=cyl.r, y0=cyl.y0, z0=cyl.z0, boundary_type=cyl.boundary_type, albedo=cyl.albedo, name=cyl.name, surface_id=cyl.id)
+
+
+class CADYCylinder(CADSurface, openmc.YCylinder):
+
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ cad_cmds = []
+ h = inner_world[1] if inner_world else extents[1]
+ cad_cmds.append( f"cylinder height {h} radius {self.r}")
+ ids = emit_get_last_id( ent_type , cad_cmds)
+ cad_cmds.append(f"rotate body {{ {ids} }} about x angle 90")
+ if node.side != '-':
+ wid = 0
+ if inner_world:
+ if hex:
+ cad_cmds.append(f"create prism height {inner_world[2]} sides 6 radius { ( inner_world[0] / 2 ) }")
+ wid = emit_get_last_id(ent_type, cad_cmds)
+ cad_cmds.append(f"rotate body {{ {wid} }} about z angle 30")
+ cad_cmds.append(f"rotate body {{ {wid} }} about x angle 90")
+ else:
+ cad_cmds.append(f"brick x {inner_world[0]} y {inner_world[1]} z {inner_world[2]}")
+ wid = emit_get_last_id(ent_type, cad_cmds)
+ else:
+ cad_cmds.append( f"brick x {extents[0]} y {extents[1]} z {extents[2]}" )
+ wid = emit_get_last_id( ent_type , cad_cmds)
+ cad_cmds.append(f"subtract body {{ { ids } }} from body {{ { wid } }}")
+ move(wid, self.x0, 0, self.z0, cad_cmds)
+ return wid, cad_cmds
+ move(ids, self.x0, 0, self.z0, cad_cmds)
+ return ids, cad_cmds
+
+ @classmethod
+ def from_openmc_surface_inner(cls, cyl):
+ return cls(r=cyl.r, x0=cyl.x0, z0=cyl.z0, boundary_type=cyl.boundary_type, albedo=cyl.albedo, name=cyl.name, surface_id=cyl.id)
+
+
+class CADZCylinder(CADSurface, openmc.ZCylinder):
+
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ cad_cmds = []
+ h = inner_world[2] if inner_world else extents[2]
+ cad_cmds.append( f"cylinder height {h} radius {self.r}")
+ ids = emit_get_last_id( ent_type , cad_cmds)
+ if node.side != '-':
+ wid = 0
+ if inner_world:
+ if hex:
+ cad_cmds.append(f"create prism height {inner_world[2]} sides 6 radius { ( inner_world[0] / 2 ) }")
+ wid = emit_get_last_id(ent_type, cad_cmds)
+ cad_cmds.append(f"rotate body {{ {wid} }} about z angle 30")
+ else:
+ cad_cmds.append(f"brick x {inner_world[0]} y {inner_world[1]} z {inner_world[2]}")
+ wid = emit_get_last_id(ent_type, cad_cmds)
+ else:
+ cad_cmds.append( f"brick x {extents[0]} y {extents[1]} z {extents[2]}" )
+ wid = emit_get_last_id( ent_type , cad_cmds)
+ cad_cmds.append(f"subtract body {{ { ids } }} from body {{ { wid } }}")
+ move(wid, self.x0, self.y0, 0, cad_cmds)
+ return wid, cad_cmds
+ move(ids, self.x0, self.y0, 0, cad_cmds)
+ return ids, cad_cmds
+
+ @classmethod
+ def from_openmc_surface_inner(cls, cyl):
+ return cls(r=cyl.r, x0=cyl.x0, y0=cyl.y0, boundary_type=cyl.boundary_type, albedo=cyl.albedo, name=cyl.name, surface_id=cyl.id)
+
+
+class CADSphere(CADSurface, openmc.Sphere):
+
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ cad_cmds = []
+ cad_cmds.append( f"sphere redius {self.r}")
+ ids = emit_get_last_id(ent_type, cad_cmds)
+ move(ids, self.x0, self.y0, self.z0, cad_cmds)
+ return ids, cad_cmds
+
+ @classmethod
+ def from_openmc_surface_inner(cls, sphere):
+ return cls(r=sphere.r, x0=sphere.x0, y0=sphere.y0, z0=sphere.z0, boundary_type=sphere.boundary_type, albedo=sphere.albedo, name=sphere.name, surface_id=sphere.id)
+
+class CADCone(CADSurface):
+
+ def to_cubit_surface(self, ent_type, node, extents, inner_world=None, hex=False):
+ raise NotImplementedError('General Cones are not yet supported')
+
+ @classmethod
+ def from_openmc_surface(cls, surface):
+ raise NotImplementedError('General Cones are not yet supported')
+
+class CADXCone(CADSurface, openmc.XCone):
+
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ cad_cmds = []
+ cad_cmds.append( f"create frustum height {extents[0]} radius {math.sqrt(self.coefficients['r2']*extents[0])} top 0")
+ ids = emit_get_last_id( ent_type , cad_cmds)
+ cad_cmds.append( f"rotate body {{ {ids} }} about y angle 90")
+ if node.side != '-':
+ cad_cmds.append( f"brick x {extents[0]} y {extents[1]} z {extents[2]}" )
+ wid = emit_get_last_id( ent_type , cad_cmds)
+ cad_cmds.append(f"subtract body {{ {ids} }} from body {{ {wid} }}")
+ move(wid, self.coefficients['x0'], self.coefficients['y0'], self.coefficients['z0'], cad_cmds)
+ ids = wid
+ else:
+ move(ids, self.coefficients['x0'], self.coefficients['y0'], self.coefficients['z0'], cad_cmds)
+ return ids, cad_cmds
+
+ @classmethod
+ def from_openmc_surface_inner(cls, surface):
+ return cls(x0=surface.x0, y0=surface.y0, z0=surface.z0, r2=surface.r2, boundary_type=surface.boundary_type, albedo=surface.albedo, name=surface.name, surface_id=surface.id)
+
+
+class CADYCone(CADSurface, openmc.YCone):
+
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ cad_cmds = []
+ cad_cmds.append( f"create frustum height {extents[1]} radius {math.sqrt(self.coefficients['r2']*extents[1])} top 0")
+ ids = emit_get_last_id(ent_type, cad_cmds)
+ cad_cmds.append( f"rotate body {{ {ids} }} about x angle 90")
+ if node.side != '-':
+ cad_cmds.append( f"brick x {extents[0]} y {extents[1]} z {extents[2]}" )
+ wid = emit_get_last_id(ent_type, cad_cmds)
+ cad_cmds.append(f"subtract body {{ {ids} }} from body {{ {wid} }}")
+ move(wid, self.coefficients['x0'], self.coefficients['y0'], self.coefficients['z0'], cad_cmds)
+ ids = wid
+ else:
+ move(ids, self.coefficients['x0'], self.coefficients['y0'], self.coefficients['z0'], cad_cmds)
+ return ids, cad_cmds
+
+ @classmethod
+ def from_openmc_surface_inner(cls, surface):
+ return cls(x0=surface.x0, y0=surface.y0, z0=surface.z0, r2=surface.r2, boundary_type=surface.boundary_type, albedo=surface.albedo, name=surface.name, surface_id=surface.id)
+
+
+class CADZCone(CADSurface, openmc.ZCone):
+
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ cad_cmds = []
+ cad_cmds.append( f"create frustum height {extents[2]} radius {math.sqrt(self.coefficients['r2']*extents[2])} top 0")
+ ids = emit_get_last_id(ent_type, cad_cmds)
+ if node.side != '-':
+ cad_cmds.append( f"brick x {extents[0]} y {extents[1]} z {extents[2]}" )
+ wid = emit_get_last_id(ent_type , cad_cmds)
+ cad_cmds.append(f"subtract body {{ {ids} }} from body {{ {wid} }}")
+ move(wid, self.coefficients['x0'], self.coefficients['y0'], self.coefficients['z0'], cad_cmds)
+ ids = wid
+ else:
+ move(ids, self.coefficients['x0'], self.coefficients['y0'], self.coefficients['z0'], cad_cmds)
+ return ids, cad_cmds
+
+ @classmethod
+ def from_openmc_surface_inner(cls, surface):
+ return cls(x0=surface.x0, y0=surface.y0, z0=surface.z0, r2=surface.r2, boundary_type=surface.boundary_type, albedo=surface.albedo, name=surface.name, surface_id=surface.id)
+
+
+class CADTorus(CADSurface):
+
+ def check_coeffs(self):
+ if self.b != self.c:
+ raise ValueError("Only torri with constant minor radii are supported")
+
+ @classmethod
+ def from_openmc_surface_inner(cls, surface):
+ return cls(x0=surface.x0, y0=surface.y0, z0=surface.z0, a=surface.a, b=surface.b, c=surface.c, boundary_type=surface.boundary_type, albedo=surface.albedo, name=surface.name, surface_id=surface.id)
+
+class CADXTorus(CADTorus, openmc.XTorus):
+
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ self.check_coeffs()
+ cad_cmds = []
+ cad_cmds.append( f"torus major radius {self.a} minor radius {self.b}" )
+ ids = emit_get_last_id(ent_type, cad_cmds)
+ cad_cmds.append( f"rotate body {{ {ids} }} about y angle 90")
+ if node.side != '-':
+ cad_cmds.append( f"brick x {extents[0]} y {extents[1]} z {extents[2]}" )
+ wid = emit_get_last_id(ent_type, cad_cmds)
+ cad_cmds.append(f"subtract body {{ {ids} }} from body {{ {wid} }}")
+ move(wid, self.x0, self.y0, self.z0, cad_cmds)
+ ids = wid
+ else:
+ move(ids, self.x0, self.y0, self.z0, cad_cmds)
+ return ids, cad_cmds
+
+
+
+class CADYTorus(CADTorus, openmc.YTorus):
+
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ self.check_coeffs()
+ cad_cmds = []
+ cad_cmds.append( f"torus major radius {self.a} minor radius {self.b}" )
+ ids = emit_get_last_id(ent_type, cad_cmds)
+ cad_cmds.append( f"rotate body {{ {ids} }} about x angle 90")
+ if node.side != '-':
+ cad_cmds.append( f"brick x {extents[0]} y {extents[1]} z {extents[2]}" )
+ wid = emit_get_last_id(ent_type, cad_cmds)
+ cad_cmds.append(f"subtract body {{ {ids} }} from body {{ {wid} }}")
+ move(wid, self.x0, self.y0, self.z0, cad_cmds)
+ ids = wid
+ else:
+ move(ids, self.x0, self.y0, self.z0, cad_cmds)
+ return ids, cad_cmds
+
+
+class CADZTorus(CADTorus, openmc.ZTorus):
+
+ def to_cubit_surface_inner(self, ent_type, node, extents, inner_world=None, hex=False):
+ self.check_coeffs()
+ cad_cmds = []
+ cad_cmds.append( f"torus major radius {self.a} minor radius {self.b}" )
+ ids = emit_get_last_id(ent_type, cad_cmds)
+ if node.side != '-':
+ cad_cmds.append( f"brick x {extents[0]} y {extents[1]} z {extents[2]}" )
+ wid = emit_get_last_id(ent_type, cad_cmds)
+ cad_cmds.append(f"subtract body {{ {ids} }} from body {{ {wid} }}")
+ move(wid, self.x0, self.y0, self.z0, cad_cmds)
+ ids = wid
+ else:
+ move(ids, self.x0, self.y0, self.z0, cad_cmds)
+ return ids, cad_cmds
+
+
+_CAD_SURFACES = [CADPlane, CADXPlane, CADYPlane, CADZPlane, CADCylinder, CADXCylinder, CADYCylinder, CADZCylinder, CADSphere, CADXCone, CADYCone, CADZCone, CADXTorus, CADYTorus, CADZTorus]
+
+_CAD_SURFACE_DICTIONARY = {s._type: s for s in _CAD_SURFACES}
\ No newline at end of file
diff --git a/src/openmc_cad_adapter/to_cubit_journal.py b/src/openmc_cad_adapter/to_cubit_journal.py
index cf92ae6..83cec4e 100644
--- a/src/openmc_cad_adapter/to_cubit_journal.py
+++ b/src/openmc_cad_adapter/to_cubit_journal.py
@@ -4,6 +4,7 @@
from numbers import Real
from pathlib import Path
import sys
+import warnings
from numpy.linalg import matrix_rank
import numpy as np
@@ -17,140 +18,11 @@
from openmc.surface import Halfspace, Quadric
from openmc.lattice import Lattice, HexLattice
+from .gqs import characterize_general_quadratic
+from .cubit_util import emit_get_last_id, reset_cubit_ids, new_variable
+from .geom_util import rotate, move
-ELLIPSOID = 1
-ONE_SHEET_HYPERBOLOID = 2
-TWO_SHEET_HYPERBOLOID = 3
-ELLIPTIC_CONE = 4
-ELLIPTIC_PARABOLOID = 5
-HYPERBOLIC_PARABOLOID = 6
-ELLIPTIC_CYLINDER = 7
-HYPERBOLIC_CYLINDER = 8
-PARABOLIC_CYLINDER = 9
-
-def characterize_general_quadratic( surface ): #s surface
- gq_tol = 1e-6
- equivalence_tol = 1e-8
- a = surface.coefficients['a']
- b = surface.coefficients['b']
- c = surface.coefficients['c']
- d = surface.coefficients['d']
- e = surface.coefficients['e']
- f = surface.coefficients['f']
- g = surface.coefficients['g']
- h = surface.coefficients['h']
- j = surface.coefficients['j']
- k = surface.coefficients['k']
- #coefficient matrix
- Aa = np.matrix([
- [a, d/2, f/2],
- [d/2, b, e/2],
- [f/2, e/2, c]])
- #hessian matrix
- Ac = np.matrix([
- [a, d/2, f/2, g/2],
- [d/2, b, e/2, h/2],
- [f/2, e/2, c, j/2],
- [g/2, h/2, j/2, k]])
- rank_Aa = matrix_rank( Aa )
- rank_Ac = matrix_rank( Ac )
-
- det_Ac = np.linalg.det(Ac)
- if np.abs( det_Ac ) < gq_tol:
- delta = 0
- else:
- delta = -1 if det_Ac < 0 else -1
- eigen_results = np.linalg.eig(Aa);
- signs = np.array([ 0, 0, 0 ])
- for i in range( 0, 3 ):
- if eigen_results.eigenvalues[ i ] > -1 * gq_tol:
- signs[i] = 1
- else:
- signs[i] = -1
-
- S = 1 if np.abs( signs.sum() ) == 3 else -1
-
- B = np.array([[ -g/2], [-h/2], [-j/2 ]])
-
- Aai = np.linalg.pinv( Aa )
-
- C = Aai * B
-
- dx = C[0]
- dy = C[1]
- dz = C[2]
-
- #Update the constant using the resulting translation
- K_ = k + g/2*dx + h/2*dy + j/2*dz
-
- if rank_Aa == 2 and rank_Ac == 3 and S == 1:
- delta = -1 if K_ * signs[0] else 1
-
- D = -1 if K_ * signs[0] else 1
-
-
- def find_type( rAa, rAc, delta, S, D ):
- if 3 == rAa and 4 == rAc and -1 == delta and 1 == S:
- return ELLIPSOID
- elif 3 == rAa and 4 == rAc and 1 == delta and -1 == S:
- return ONE_SHEET_HYPERBOLOID
- elif 3 == rAa and 4 == rAc and -1 == delta and -1 == S:
- return TWO_SHEET_HYPERBOLOID
- elif 3 == rAa and 3 == rAc and 0 == delta and -1 == S:
- return ELLIPTIC_CONE
- elif 2 == rAa and 4 == rAc and -1 == delta and 1 == S:
- return ELLIPTIC_PARABOLOID
- elif 2 == rAa and 4 == rAc and 1 == delta and -1 == S:
- return HYPERBOLIC_PARABOLOID
- elif 2 == rAa and 3 == rAc and -1 == delta and 1 == S:
- return ELLIPTIC_CYLINDER
- elif 2 == rAa and 3 == rAc and 0 == delta and -1 == S:
- return HYPERBOLIC_CYLINDER
- elif 2 == rAa and 3 == rAc and 0 == delta and 1 == S:
- return PARABOLIC_CYLINDER
- elif 2 == rAa and 3 == rAc and 1 == S and D != 0 :
- return find_type( rAa, rAc, D, S, 0 )
- else:
- raise "UNKNOWN QUADRATIC"
-
- gq_type = find_type( rank_Aa, rank_Ac, delta, S, D )
-
- #set the translation
- translation = C
-
- rotation_matrix = eigen_results.eigenvectors
- eigenvalues = eigen_results.eigenvalues
-
- for i in range( 0, 3 ):
- if abs(eigenvalues[i]) < gq_tol:
- eigenvalues[i] = 0
-
- A_ = eigenvalues[0]
- B_ = eigenvalues[1]
- C_ = eigenvalues[2];
- D_ = 0; E_ = 0; F_ = 0;
- G_ = 0; H_ = 0; J_ = 0;
- if gq_type == ONE_SHEET_HYPERBOLOID:
- if abs( K_) < equivalence_tol:
- K_ = 0
- return ELLIPTIC_CONE
- if gq_type == TWO_SHEET_HYPERBOLOID:
- if abs( K_) < equivalence_tol:
- K_ = 0
- return ELLIPTIC_CONE
- if gq_type == ELLIPSOID:
- if abs( A_) < equivalence_tol:
- A_ = 0
- return ELLIPTIC_CYLINDER
- elif abs( B_) < equivalence_tol:
- B_ = 0
- return ELLIPTIC_CYLINDER
- elif abs( C_) < equivalence_tol:
- C_ = 0
- return ELLIPTIC_CYLINDER
- else:
- return ( gq_type, A_, B_, C_, K_, translation, rotation_matrix )
-
+from .surfaces import _CAD_SURFACE_DICTIONARY
def flatten(S):
if S == []:
@@ -160,21 +32,6 @@ def flatten(S):
return S[:1] + flatten(S[1:])
-def vector_to_euler_xyz(v):
- x, y, z = v
- phi = math.atan2(z, x)
- theta = math.acos(x / math.sqrt(x**2 + y**2))
- psi = math.atan2(y * math.cos(theta), x)
-
- # Ensure angles are within [0, 2*pi] range
- phi %= (2 * math.pi)
- theta %= (2 * math.pi)
- psi %= (2 * math.pi)
-
- oe = 180 / math.pi
- return phi * oe, theta * oe, psi * oe
-
-
def to_cubit_journal(geometry : openmc.Geometry, world : Iterable[Real] = None,
cells: Iterable[int, openmc.Cell] = None,
filename: str = "openmc.jou",
@@ -200,6 +57,7 @@ def to_cubit_journal(geometry : openmc.Geometry, world : Iterable[Real] = None,
Internal parameter.
"""
+ reset_cubit_ids()
if not filename.endswith('.jou'):
filename += '.jou'
@@ -222,7 +80,7 @@ def to_cubit_journal(geometry : openmc.Geometry, world : Iterable[Real] = None,
bbox = geometry.bounding_box
if not all(np.isfinite(bbox[0])) or not all(np.isfinite(bbox[1])):
raise RuntimeError('Model bounds were not provided and the bounding box determined by OpenMC is not finite.'
- 'Please provide a world size argument to proceed')
+ ' Please provide a world size argument to proceed')
# to ensure that the box
box_max = np.max(np.abs(bbox[0], bbox[1]).T)
world_size = (2 * box_max, 2 * box_max, 2 * box_max)
@@ -231,12 +89,7 @@ def to_cubit_journal(geometry : openmc.Geometry, world : Iterable[Real] = None,
raise RuntimeError("Model extents could not be determined automatically and must be provided manually")
w = world
- cid = 1
- def lastid():
- nonlocal cid
- id = cid
- cid = cid + 1
- return id
+
cmds = []
cmds.extend( [
"set graphics off",
@@ -246,301 +99,26 @@ def lastid():
#"set info off",
#"set warning off",
])
- def python_cmd(s):
- cmds.append(s)
def cubit_cmd(s):
cmds.append(s)
- def new_variable():
- idn = lastid()
- return f"id{idn}"
-
- def emit_get_last_id(type="body"):
- idn = lastid()
- ids = f"id{idn}"
- python_cmd(f'#{{ {ids} = Id("{type}") }}')
- return ids
-
- def rotate(id, x, y, z):
- if nonzero(x, y, z):
- phi, theta, psi = vector_to_euler_xyz((x, y, z))
- cubit_cmd(f"body {{ {id} }} rotate {phi} about Z")
- cubit_cmd(f"body {{ {id} }} rotate {theta} about Y")
- cubit_cmd(f"body {{ {id} }} rotate {psi} about X")
- def nonzero(*args):
- return any(arg!= 0 for arg in args)
-
- def move( id, x, y, z ):
- if nonzero( x, y, z ):
- cubit_cmd( f"body {{ {id} }} move {x} {y} {z}" )
-
- def make_world_brick():
- pass
-
- def surface_to_cubit_journal(node, w, indent = 0, inner_world = None, hex = False, ent_type = "body" ):
+ def surface_to_cubit_journal(node, w, indent = 0, inner_world = None, hex = False, ent_type = "body", materials='group'):
def ind():
return ' ' * (2*indent)
if isinstance(node, Halfspace):
seen.add( node.surface )
surface = node.surface
+ nonlocal cmds
+
def reverse():
return "reverse" if node.side == '-' else ""
- if surface._type == "plane":
- ca = surface.coefficients['a']
- cb = surface.coefficients['b']
- cc = surface.coefficients['c']
- cd = surface.coefficients['d']
- n = np.array([ca, cb, cc ])
- maxi = 0
- maxv = sys.float_info.min
- for i in range( 0, 3 ):
- if n[i] > maxv:
- maxi = i
- maxv = n[i]
-
- ns = cd * n
-
- if False:
- n2 = np.copy( n )
- n2[ maxi ] = - n2[maxi]
- n3 = np.cross(n, n2)
- n4 = np.cross(n, n3)
- print( n2, n3, n4 )
- n3 = n3/np.linalg.norm(n3)
- n4 = n4/np.linalg.norm(n4)
- n3 = np.add(ns, n3)
- n4 = np.add(ns, n4)
- cmds.append( f"create vertex {ns[0]} {ns[1]} {ns[2]}")
- v1 = emit_get_last_id( "vertex" )
- cmds.append( f"create vertex {n3[0]} {n3[1]} {n3[2]}")
- v2 = emit_get_last_id( "vertex" )
- cmds.append( f"create vertex {n4[0]} {n4[1]} {n4[2]}")
- v3 = emit_get_last_id( "vertex" )
- cmds.append( f"create planar surface with plane vertex {{ {v1} }} vertex {{ {v2} }} vertex {{ {v3} }} Extended Absolute {w[0]}")
- surf = emit_get_last_id( "surface" )
- cmds.append( f"brick x {w[0]} y {w[1]} z {w[2]}" )
- ids = emit_get_last_id( ent_type )
- cmds.append( f"section body {{ {ids} }} with surface {{ {surf} }} {reverse()}")
- cmds.append( f"del surface {{ {surf} }}")
- cmds.append( f"del vertex {{ {v1} }} {{ {v2} }} {{ {v3} }}")
- else:
- #for some reason cubit sectioning with a surface is backwards from cubit sectioning with an axis aligned plane
- def lreverse():
- if node.side == '-':
- return ""
- else:
- return "reverse"
- cmds.append( f"create surface rectangle width { 2*w[0] } zplane")
- sur = emit_get_last_id( "surface" )
- surf = emit_get_last_id( "body" )
- cmds.append( f"# dir {node.side}" )
- cmds.append( f"# c_ {ca} {cb} {cc} {cd}" )
- n = n/np.linalg.norm(n)
- ns = cd * n
- zn = np.array([ 0, 0, 1 ])
- n3 = np.cross(n, zn)
- dot = np.dot(n, zn)
- cmds.append(f"# n3 {n3[0]} {n3[1]} {n3[2]}")
- degs = math.degrees(math.acos(np.dot(n, zn)))
- y = np.linalg.norm(n3)
- x = dot
- angle = - math.degrees(math.atan2( y, x ))
- if n3[0] != 0 or n3[1] != 0 or n3[2] != 0:
- cmds.append(f"Rotate body {{ {surf} }} about 0 0 0 direction {n3[0]} {n3[1]} {n3[2]} Angle {angle}")
- cmds.append(f"body {{ { surf } }} move {ns[0]} {ns[1]} {ns[2]}")
- cmds.append(f"brick x {w[0]} y {w[1]} z {w[2]}" )
- ids = emit_get_last_id( ent_type )
- cmds.append(f"section body {{ {ids} }} with surface {{ {sur} }} {lreverse()}")
- cmds.append(f"del surface {{ {sur} }}")
- return ids
- elif surface._type == "x-plane":
- cmds.append(f"brick x {w[0]} y {w[1]} z {w[2]}")
- ids = emit_get_last_id( ent_type)
- cmds.append(f"section body {{ {ids} }} with xplane offset {surface.coefficients['x0']} {reverse()}")
- return ids
- elif surface._type == "y-plane":
- cmds.append(f"brick x {w[0]} y {w[1]} z {w[2]}")
- ids = emit_get_last_id(ent_type)
- cmds.append(f"section body {{ {ids} }} with yplane offset {surface.coefficients['y0']} {reverse()}")
- return ids
- elif surface._type == "z-plane":
- cmds.append( f"brick x {w[0]} y {w[1]} z {w[2]}")
- ids = emit_get_last_id( ent_type )
- cmds.append( f"section body {{ {ids} }} with zplane offset {surface.coefficients['z0']} {reverse()}")
- return ids
- elif surface._type == "cylinder":
- h = inner_world[2] if inner_world else w[2]
- cmds.append(f"cylinder height {h} radius {surface.coefficients['r']}")
- ids = emit_get_last_id()
- if node.side != '-':
- wid = 0
- if inner_world:
- if hex:
- cmds.append(f"create prism height {inner_world[2]} sides 6 radius { ( inner_world[0] / 2 ) }")
- wid = emit_get_last_id(ent_type)
- cmds.append(f"rotate body {{ {wid} }} about z angle 30")
- else:
- cmds.append(f"brick x {inner_world[0]} y {inner_world[1]} z {inner_world[2]}")
- wid = emit_get_last_id(ent_type)
- else:
- cmds.append( f"brick x {w[0]} y {w[1]} z {w[2]}" )
- wid = emit_get_last_id(ent_type)
- cmds.append( f"subtract body {{ { ids } }} from body {{ { wid } }}" )
- rotate( wid, surface.coefficients['dx'], surface.coefficients['dy'], surface.coefficients['dz'] )
- move( wid, surface.coefficients['x0'], surface.coefficients['y0'], surface.coefficients['z0'] )
- return wid
- rotate( ids, surface.coefficients['dx'], surface.coefficients['dy'], surface.coefficients['dz'] )
- move( ids, surface.coefficients['x0'], surface.coefficients['y0'], surface.coefficients['z0'] )
- return ids
- elif surface._type == "x-cylinder":
- h = inner_world[0] if inner_world else w[0]
- cmds.append(f"cylinder height {h} radius {surface.coefficients['r']}")
- ids = emit_get_last_id( ent_type )
- cmds.append( f"rotate body {{ { ids } }} about y angle 90")
- if node.side != '-':
- wid = 0
- if inner_world:
- if hex:
- cmds.append(f"create prism height {inner_world[2]} sides 6 radius { inner_world[0] / 2 } ")
- wid = emit_get_last_id( ent_type )
- cmds.append(f"rotate body {{ {wid} }} about z angle 30")
- cmds.append(f"rotate body {{ {wid} }} about y angle 90")
- else:
- cmds.append(f"brick x {inner_world[0]} y {inner_world[1]} z {inner_world[2]}")
- wid = emit_get_last_id(ent_type)
- else:
- cmds.append(f"brick x {w[0]} y {w[1]} z {w[2]}")
- wid = emit_get_last_id(ent_type)
- cmds.append(f"subtract body {{ { ids } }} from body {{ { wid } }}")
- move(wid, 0, surface.coefficients['y0'], surface.coefficients['z0'])
- return wid
- move(ids, 0, surface.coefficients['y0'], surface.coefficients['z0'])
- return ids
- elif surface._type == "y-cylinder":
- h = inner_world[1] if inner_world else w[1]
- cmds.append(f"cylinder height {h} radius {surface.coefficients['r']}")
- ids = emit_get_last_id( ent_type )
- cmds.append(f"rotate body {{ {ids} }} about x angle 90")
- if node.side != '-':
- wid = 0
- if inner_world:
- if hex:
- cmds.append(f"create prism height {inner_world[2]} sides 6 radius { ( inner_world[0] / 2) }")
- wid = emit_get_last_id( ent_type )
- cmds.append(f"rotate body {{ {wid} }} about z angle 30")
- cmds.append(f"rotate body {{ {wid} }} about x angle 90")
- else:
- cmds.append(f"brick x {inner_world[0]} y {inner_world[1]} z {inner_world[2]}")
- wid = emit_get_last_id(ent_type)
- else:
- cmds.append(f"brick x {w[0]} y {w[1]} z {w[2]}")
- wid = emit_get_last_id(ent_type)
- cmds.append(f"subtract body {{ {ids} }} from body {{ {wid} }}")
- move(wid, surface.coefficients['x0'], 0, surface.coefficients['z0'])
- return wid
- move(ids, surface.coefficients['x0'], 0, surface.coefficients['z0'])
- return ids
- elif surface._type == "z-cylinder":
- h = inner_world[2] if inner_world else w[2]
- cmds.append( f"cylinder height {h} radius {surface.coefficients['r']}")
- ids = emit_get_last_id( ent_type )
- if node.side != '-':
- wid = 0
- if inner_world:
- if hex:
- cmds.append(f"create prism height {inner_world[2]} sides 6 radius { ( inner_world[0] / 2 ) }")
- wid = emit_get_last_id(ent_type)
- cmds.append(f"rotate body {{ {wid} }} about z angle 30")
- else:
- cmds.append(f"brick x {inner_world[0]} y {inner_world[1]} z {inner_world[2]}")
- wid = emit_get_last_id(ent_type)
- else:
- cmds.append( f"brick x {w[0]} y {w[1]} z {w[2]}" )
- wid = emit_get_last_id( ent_type )
- cmds.append(f"subtract body {{ { ids } }} from body {{ { wid } }}")
- move(wid, surface.coefficients['x0'], surface.coefficients['y0'], 0)
- return wid
- move(ids, surface.coefficients['x0'], surface.coefficients['y0'], 0)
- return ids
- elif surface._type == "sphere":
- cmds.append( f"sphere redius {surface.coefficients['r']}")
- ids = emit_get_last_id(ent_type)
- move(ids, surface.coefficients['x0'], surface.coefficients['y0'], surface.coefficients['z0'])
- pass
- elif surface._type == "cone":
- raise NotImplementedError("cone not implemented")
- pass
- elif surface._type == "x-cone":
- cmds.append( f"create frustum height {w[0]} radius {math.sqrt(surface.coefficients['r2']*w[0])} top 0")
- ids = emit_get_last_id( ent_type )
- cmds.append( f"rotate body {{ {ids} }} about y angle 90")
- if node.side != '-':
- cmds.append( f"brick x {w[0]} y {w[1]} z {w[2]}" )
- wid = emit_get_last_id( ent_type )
- cmds.append(f"subtract body {{ {ids} }} from body {{ {wid} }}")
- move(wid, surface.coefficients['x0'], surface.coefficients['y0'], surface.coefficients['z0'])
- return wid
- move(ids, surface.coefficients['x0'], surface.coefficients['y0'], surface.coefficients['z0'])
- return ids
- elif surface._type == "y-cone":
- cmds.append( f"create frustum height {w[1]} radius {math.sqrt(surface.coefficients['r2']*w[1])} top 0")
- ids = emit_get_last_id( ent_type )
- cmds.append( f"rotate body {{ {ids} }} about x angle 90")
- if node.side != '-':
- cmds.append( f"brick x {w[0]} y {w[1]} z {w[2]}" )
- wid = emit_get_last_id( ent_type )
- cmds.append( f"subtract body {{ {ids} }} from body {{ {wid} }}" )
- move( wid, surface.coefficients['x0'], surface.coefficients['y0'], surface.coefficients['z0'] )
- return wid
- move( ids, surface.coefficients['x0'], surface.coefficients['y0'], surface.coefficients['z0'] )
- return ids
- elif surface._type == "z-cone":
- cmds.append( f"create frustum height {w[2]} radius {math.sqrt(surface.coefficients['r2']*w[2])} top 0")
- ids = emit_get_last_id( ent_type )
- if node.side != '-':
- cmds.append( f"brick x {w[0]} y {w[1]} z {w[2]}" )
- wid = emit_get_last_id( ent_type )
- cmds.append( f"subtract body {{ {ids} }} from body {{ {wid} }}" )
- move( wid, surface.coefficients['x0'], surface.coefficients['y0'], surface.coefficients['z0'] )
- return wid
- move( ids, surface.coefficients['x0'], surface.coefficients['y0'], surface.coefficients['z0'] )
- return ids
- elif surface._type == "x-torus":
- cmds.append( f"torus major radius {surface.coefficients['a']} minor radius {surface.coefficients['b']}")
- ids = emit_get_last_id( ent_type )
- cmds.append( f"rotate body {{ {ids} }} about y angle 90")
- if node.side != '-':
- cmds.append( f"brick x {w[0]} y {w[1]} z {w[2]}" )
- wid = emit_get_last_id( ent_type )
- cmds.append( f"subtract body {{ {ids} }} from body {{ {wid} }}" )
- move( wid, surface.coefficients['x0'], surface.coefficients['y0'], surface.coefficients['z0'] )
- return wid
- move( ids, surface.coefficients['x0'], surface.coefficients['y0'], surface.coefficients['z0'] )
- return ids
- elif surface._type == "y-torus":
- cmds.append( f"torus major radius {surface.coefficients['a']} minor radius {surface.coefficients['b']}")
- ids = emit_get_last_id( ent_type )
- cmds.append( f"rotate body {{ {ids} }} about x angle 90")
- if node.side != '-':
- cmds.append( f"brick x {w[0]} y {w[1]} z {w[2]}" )
- wid = emit_get_last_id( ent_type )
- cmds.append( f"subtract body {{ {id} }} from body {{ {wid} }}" )
- move( wid, surface.coefficients['x0'], surface.coefficients['y0'], surface.coefficients['z0'] )
- return wid
- return ids
- elif surface._type == "z-torus":
- cmds.append( f"torus major radius {surface.coefficients['a']} minor radius {surface.coefficients['b']}")
- ids = emit_get_last_id( ent_type )
- if node.side != '-':
- cmds.append(f"brick x {w[0]} y {w[1]} z {w[2]}")
- wid = emit_get_last_id(ent_type)
- cmds.append(f"subtract body {{ {ids} }} from body {{ {wid} }}")
- move(wid, surface.coefficients['x0'], surface.coefficients['y0'], surface.coefficients['z0'])
- return wid
- move(ids, surface.coefficients['x0'], surface.coefficients['y0'], surface.coefficients['z0'])
+ if cad_surface := _CAD_SURFACE_DICTIONARY.get(surface._type):
+ cad_surface = cad_surface.from_openmc_surface(surface)
+ ids, cad_cmds = cad_surface.to_cubit_surface(ent_type, node, w, inner_world, hex)
+ cmds += cad_cmds
return ids
elif surface._type == "quadric":
(gq_type, A_, B_, C_, K_, translation, rotation_matrix) = characterize_general_quadratic(surface)
@@ -581,9 +159,9 @@ def rotation_to_axis_angle( mat ):
r2 = math.sqrt( abs( -K_/B_ ) )
r3 = math.sqrt( abs( -K_/C_ ) )
cmds.append( f"sphere redius 1")
- ids = emit_get_last_id( ent_type )
+ ids = emit_get_last_id( ent_type , cmds)
cmds.append( f"body {{ { ids } }} scale x { r1 } y { r2 } z { r3 }")
- move( ids, translation[0,0], translation[1,0], translation[2,0] )
+ move( ids, translation[0,0], translation[1,0], translation[2,0], cmds)
elif gq_type == ELLIPTIC_CYLINDER : #7
if A_ == 0:
print( "X", gq_type, A_, B_, C_, K_, r_axis, r_degs )
@@ -591,28 +169,28 @@ def rotation_to_axis_angle( mat ):
r1 = math.sqrt( abs( K_/C_ ) )
r2 = math.sqrt( abs( K_/B_ ) )
cmds.append( f"cylinder height {h} Major Radius {r1} Minor Radius {r2}")
- ids = emit_get_last_id( ent_type )
+ ids = emit_get_last_id( ent_type , cmds)
cmds.append( f"rotate body {{ { ids } }} about y angle 90")
if node.side != '-':
wid = 0
if inner_world:
if hex:
cmds.append( f"create prism height {inner_world[2]} sides 6 radius { inner_world[0] / 2 } " )
- wid = emit_get_last_id( ent_type )
+ wid = emit_get_last_id( ent_type , cmds)
cmds.append( f"rotate body {{ {wid} }} about z angle 30" )
cmds.append( f"rotate body {{ {wid} }} about y angle 90")
else:
cmds.append( f"brick x {inner_world[0]} y {inner_world[1]} z {inner_world[2]}" )
- wid = emit_get_last_id( ent_type )
+ wid = emit_get_last_id( ent_type , cmds)
else:
cmds.append( f"brick x {w[0]} y {w[1]} z {w[2]}" )
- wid = emit_get_last_id( ent_type )
+ wid = emit_get_last_id( ent_type , cmds)
cmds.append( f"subtract body {{ { ids } }} from body {{ { wid } }}" )
cmds.append( f"Rotate body {{ {wid } }} about 0 0 0 direction {r_axis[0]} {r_axis[1]} {r_axis[2]} Angle {r_degs}")
- move( wid, translation[0,0], translation[1,0], translation[2,0] )
+ move( wid, translation[0,0], translation[1,0], translation[2,0], cmds)
return wid
cmds.append( f"Rotate body {{ {ids} }} about 0 0 0 direction {r_axis[0]} {r_axis[1]} {r_axis[2]} Angle {r_degs}")
- move( ids, translation[0,0], translation[1,0], translation[2,0] )
+ move( ids, translation[0,0], translation[1,0], translation[2,0], cmds)
return ids
if B_ == 0:
print( "Y", gq_type, A_, B_, C_, K_ )
@@ -620,28 +198,28 @@ def rotation_to_axis_angle( mat ):
r1 = math.sqrt( abs( K_/A_ ) )
r2 = math.sqrt( abs( K_/C_ ) )
cmds.append( f"cylinder height {h} Major Radius {r1} Minor Radius {r2}")
- ids = emit_get_last_id( ent_type )
+ ids = emit_get_last_id( ent_type , cmds)
cmds.append( f"rotate body {{ { ids } }} about x angle 90")
if node.side != '-':
wid = 0
if inner_world:
if hex:
cmds.append( f"create prism height {inner_world[2]} sides 6 radius { inner_world[0] / 2 } " )
- wid = emit_get_last_id( ent_type )
+ wid = emit_get_last_id( ent_type , cmds)
cmds.append( f"rotate body {{ {wid} }} about z angle 30" )
cmds.append( f"rotate body {{ {wid} }} about y angle 90")
else:
cmds.append( f"brick x {inner_world[0]} y {inner_world[1]} z {inner_world[2]}" )
- wid = emit_get_last_id( ent_type )
+ wid = emit_get_last_id( ent_type , cmds)
else:
cmds.append( f"brick x {w[0]} y {w[1]} z {w[2]}" )
- wid = emit_get_last_id( ent_type )
+ wid = emit_get_last_id( ent_type , cmds)
cmds.append( f"subtract body {{ { ids } }} from body {{ { wid } }}" )
cmds.append( f"Rotate body {{ {wid } }} about 0 0 0 direction {r_axis[0]} {r_axis[1]} {r_axis[2]} Angle {r_degs}")
- move( wid, translation[0,0], translation[1,0], translation[2,0] )
+ move( wid, translation[0,0], translation[1,0], translation[2,0], cmds)
return wid
cmds.append( f"Rotate body {{ {ids} }} about 0 0 0 direction {r_axis[0]} {r_axis[1]} {r_axis[2]} Angle {r_degs}")
- move( ids, translation[0,0], translation[1,0], translation[2,0] )
+ move( ids, translation[0,0], translation[1,0], translation[2,0], cmds)
return ids
if C_ == 0:
print( "Z", gq_type, A_, B_, C_, K_ )
@@ -649,27 +227,27 @@ def rotation_to_axis_angle( mat ):
r1 = math.sqrt( abs( K_/A_ ) )
r2 = math.sqrt( abs( K_/B_ ) )
cmds.append( f"cylinder height {h} Major Radius {r1} Minor Radius {r2}")
- ids = emit_get_last_id( ent_type )
+ ids = emit_get_last_id( ent_type , cmds)
if node.side != '-':
wid = 0
if inner_world:
if hex:
cmds.append( f"create prism height {inner_world[2]} sides 6 radius { inner_world[0] / 2 } " )
- wid = emit_get_last_id( ent_type )
+ wid = emit_get_last_id( ent_type , cmds)
cmds.append( f"rotate body {{ {wid} }} about z angle 30" )
cmds.append( f"rotate body {{ {wid} }} about y angle 90")
else:
cmds.append( f"brick x {inner_world[0]} y {inner_world[1]} z {inner_world[2]}" )
- wid = emit_get_last_id( ent_type )
+ wid = emit_get_last_id( ent_type , cmds)
else:
cmds.append( f"brick x {w[0]} y {w[1]} z {w[2]}" )
- wid = emit_get_last_id( ent_type )
+ wid = emit_get_last_id( ent_type , cmds)
cmds.append( f"subtract body {{ { ids } }} from body {{ { wid } }}" )
cmds.append( f"Rotate body {{ {wid } }} about 0 0 0 direction {r_axis[0]} {r_axis[1]} {r_axis[2]} Angle {r_degs}")
- move( wid, translation[0,0], translation[1,0], translation[2,0] )
+ move( wid, translation[0,0], translation[1,0], translation[2,0], cmds)
return wid
cmds.append( f"Rotate body {{ {ids} }} about 0 0 0 direction {r_axis[0]} {r_axis[1]} {r_axis[2]} Angle {r_degs}")
- move( ids, translation[0,0], translation[1,0], translation[2,0] )
+ move( ids, translation[0,0], translation[1,0], translation[2,0], cmds)
return ids
elif gq_type == ELLIPTIC_CONE : #3
if A_ == 0:
@@ -679,14 +257,14 @@ def rotation_to_axis_angle( mat ):
rot_angle = - 90
rot_axis = 1
cmds.append( f"create frustum height {h} Major Radius {major} Minor Radius {minor} top 0")
- ids = emit_get_last_id( ent_type )
+ ids = emit_get_last_id( ent_type , cmds)
cmds.append( f"rotate body {{ { ids } }} about y angle -90")
cmds.append( f"copy body {{ { ids } }}")
- mirror = emit_get_last_id( ent_type )
+ mirror = emit_get_last_id( ent_type , cmds)
cmds.append( f"rotate body {{ { mirror } }} about 0 0 0 angle 180")
cmds.append( f"unit body {{ { ids } }} {{ { mirror } }}")
cmds.append( f"Rotate body {{ {ids} }} about 0 0 0 direction {r_axis[0]} {r_axis[1]} {r_axis[2]} Angle {r_degs}")
- move( ids, translation[0,0], translation[1,0], translation[2,0] )
+ move( ids, translation[0,0], translation[1,0], translation[2,0], cmds)
return ids
if B_ == 0:
h = inner_world[1] if inner_world else w[1]
@@ -695,14 +273,14 @@ def rotation_to_axis_angle( mat ):
rot_angle = 90
rot_axis = 0
cmds.append( f"create frustum height {h} Major Radius {major} Minor Radius {minor} top 0")
- ids = emit_get_last_id( ent_type )
+ ids = emit_get_last_id( ent_type , cmds)
cmds.append( f"rotate body {{ { ids } }} about x angle 90")
cmds.append( f"copy body {{ { ids } }}")
- mirror = emit_get_last_id( ent_type )
+ mirror = emit_get_last_id( ent_type , cmds)
cmds.append( f"rotate body {{ { mirror } }} about 0 0 0 angle 180")
cmds.append( f"unit body {{ { ids } }} {{ { mirror } }}")
cmds.append( f"Rotate body {{ {ids} }} about 0 0 0 direction {r_axis[0]} {r_axis[1]} {r_axis[2]} Angle {r_degs}")
- move( ids, translation[0,0], translation[1,0], translation[2,0] )
+ move( ids, translation[0,0], translation[1,0], translation[2,0], cmds)
return ids
if C_ == 0:
h = inner_world[2] if inner_world else w[2]
@@ -711,13 +289,13 @@ def rotation_to_axis_angle( mat ):
rot_angle = 180
rot_axis = 0
cmds.append( f"create frustum height {h} Major Radius {major} Minor Radius {minor} top 0")
- ids = emit_get_last_id( ent_type )
+ ids = emit_get_last_id( ent_type , cmds)
cmds.append( f"copy body {{ { ids } }}")
- mirror = emit_get_last_id( ent_type )
+ mirror = emit_get_last_id( ent_type , cmds)
cmds.append( f"rotate body {{ { mirror } }} about 0 0 0 angle 180")
cmds.append( f"unit body {{ { ids } }} {{ { mirror } }}")
cmds.append( f"Rotate body {{ {ids} }} about 0 0 0 direction {r_axis[0]} {r_axis[1]} {r_axis[2]} Angle {r_degs}")
- move( ids, translation[0,0], translation[1,0], translation[2,0] )
+ move( ids, translation[0,0], translation[1,0], translation[2,0], cmds)
return ids
else:
raise NotImplementedError(f"{surface.type} not implemented")
@@ -727,25 +305,25 @@ def rotation_to_axis_angle( mat ):
print( "Complement:" )
id = surface_to_cubit_journal(node.node, w, indent + 1, inner_world, ent_type = ent_type )
cmds.append( f"brick x {w[0]} y {w[1]} z {w[2]}" )
- wid = emit_get_last_id( ent_type )
+ wid = emit_get_last_id( ent_type , cmds)
cmds.append( f"subtract body {{ {id} }} from body {{ {wid} }}" )
- return emit_get_last_id( ent_type )
+ return emit_get_last_id( ent_type , cmds)
elif isinstance(node, Intersection):
last = 0
if len( node ) > 0:
last = surface_to_cubit_journal( node[0], w, indent + 1, inner_world, ent_type = ent_type ,)
for subnode in node[1:]:
s = surface_to_cubit_journal( subnode, w, indent + 1, inner_world, ent_type = ent_type ,)
- before = emit_get_last_id()
+ before = emit_get_last_id(cmds=cmds)
cmds.append( f"intersect {ent_type} {{ {last} }} {{ {s} }}" )
- after = emit_get_last_id()
- last = new_variable();
+ after = emit_get_last_id(cmds=cmds)
+ last = new_variable()
cmds.append( f"#{{{last} = ( {before} == {after} ) ? {s} : {after}}}" )
if inner_world:
cmds.append( f"brick x {inner_world[0]} y {inner_world[1]} z {inner_world[2]}" )
- iwid = emit_get_last_id( ent_type )
+ iwid = emit_get_last_id( ent_type , cmds)
cmds.append( f"intersect {ent_type} {{ {last} }} {{ {iwid} }}" )
- return emit_get_last_id( ent_type )
+ return emit_get_last_id( ent_type , cmds)
return last
elif isinstance(node, Union):
if len( node ) > 0:
@@ -756,7 +334,7 @@ def rotation_to_axis_angle( mat ):
cmds.append( f"unite {local_ent_type} {{ {first} }} {{ {s} }}" )
if inner_world:
cmds.append( f"brick x {inner_world[0]} y {inner_world[1]} z {inner_world[2]}" )
- iwid = emit_get_last_id( local_ent_type )
+ iwid = emit_get_last_id( local_ent_type , cmds)
cmds.append( f"intersect {ent_type} {{ {last} }} {{ {iwid} }}" )
return first
return first
@@ -776,7 +354,7 @@ def ind():
results.append( id )
elif hex:
cmds.append( f"create prism height {inner_world[2]} sides 6 radius { ( inner_world[0] / 2) }" )
- wid = emit_get_last_id( ent_type )
+ wid = emit_get_last_id( ent_type , cmds)
cmds.append( f"rotate body {{ {wid} }} about z angle 30" )
results.append( wid )
@@ -942,8 +520,17 @@ def do_cell(cell, cell_ids: Iterable[int] = None):
before = len( cmds )
cmds.append( f"#CELL {cell.id}" )
vol_or_body = process_node_or_fill( cell, w )
- if cell.fill_type == "material":
- cmds.append( f'group \"Material_{cell.fill.id}\" add body {{ { vol_or_body[0] } }} ' )
+ if cell.fill is None:
+ cmds.append(f'group "mat:void" add body {{ { vol_or_body[0] } }} ')
+ elif cell.fill_type == "material":
+ mat_identifier = f"mat:{cell.fill.id}"
+ # use material names when possible
+ if cell.fill.name is not None and cell.fill.name:
+ mat_identifier = f"mat:{cell.fill.name}"
+ if len(mat_identifier) > 32:
+ mat_identifier = mat_identifier[:32]
+ warnings.warn(f'Truncating material name {mat_identifier} to 32 characters')
+ cmds.append( f'group \"{mat_identifier}\" add body {{ { vol_or_body[0] } }} ' )
after = len( cmds )
if cell_ids is not None and cell.id in cell_ids:
@@ -973,6 +560,30 @@ def do_cell(cell, cell_ids: Iterable[int] = None):
cubit.cmd(f"save as {filename[:-4]}.cub overwrite")
+def material_assignment(cell, geom_id, assignment_type='group'):
+ if cell.fill is None:
+ mat_identifier = "mat:void"
+ elif cell.fill_type == "material":
+ mat_identifier = f"mat:{cell.fill.id}"
+ # use material names when possible
+ if cell.fill.name is not None and cell.fill.name:
+ mat_identifier = f"mat:{cell.fill.name}"
+ else:
+ return []
+
+ if len(mat_identifier) > 32:
+ mat_identifier = mat_identifier[:32]
+ warnings.warn(f'Truncating material name {mat_identifier} to 32 characters')
+
+ cmds = []
+ if assignment_type == 'group':
+ cmds.append(f'group \"{mat_identifier}\" add body {{ { geom_id } }}')
+ else:
+ raise ValueError(f"Unknown material assignment type requested: {assignment_type}")
+
+ return cmds
+
+
def openmc_to_cad():
"""Command-line interface for OpenMC to CAD model conversion"""
parser = ArgumentParser()
@@ -997,3 +608,8 @@ def openmc_to_cad():
sys.path.append(args.cubit_path)
to_cubit_journal(model.geometry, world=args.world_size, filename=args.output, cells=args.cells, to_cubit=args.to_cubit)
+
+
+__all__ = ['CADPlane', 'CADXPlane', 'CADYPlane', 'CADZPlane',
+ 'CADCylinder', 'CADXCylinder', 'CADYCylinder', 'CADZCylinder',
+ 'CADSphere', 'CADXCone', 'CADYCone', 'CADZCone', 'CADXTorus', 'CADYTorus', 'CADZTorus']
\ No newline at end of file
diff --git a/test/__init__.py b/test/__init__.py
new file mode 100644
index 0000000..03ec43a
--- /dev/null
+++ b/test/__init__.py
@@ -0,0 +1,3 @@
+
+from .conftest import test_config, run_in_tmpdir
+from .test_utilities import *
\ No newline at end of file
diff --git a/test/assembly.jou b/test/assembly.jou
new file mode 100644
index 0000000..ca412d7
--- /dev/null
+++ b/test/assembly.jou
@@ -0,0 +1,645 @@
+set graphics off
+set journal off
+#CELL 1
+create prism height 2.0 sides 6 radius 0.5
+#{ id1 = Id("body") }
+rotate body { id1 } about z angle 30
+body { id1 } name "cell 4"
+move body { id1 } midpoint location 0.0 1.7320508075688772 0.0
+cylinder height 2.0 radius 0.4
+#{ id2 = Id("body") }
+body { id2 } name "cell 5"
+move body { id2 } midpoint location 0.75 1.299038105676658 0.0
+cylinder height 2.0 radius 0.4
+#{ id3 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id4 = Id("body") }
+rotate body { id4 } about z angle 30
+subtract body { id3 } from body { id4 }
+body { id4 } name "cell 6"
+move body { id4 } midpoint location 0.75 1.299038105676658 0.0
+cylinder height 2.0 radius 0.4
+#{ id5 = Id("body") }
+body { id5 } name "cell 5"
+move body { id5 } midpoint location 1.5 0.8660254037844386 0.0
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+move body { id131 } midpoint location -1.5 -0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id132 = Id("body") }
+body { id132 } name "cell 5"
+move body { id132 } midpoint location -1.5 0.0 4.0
+cylinder height 2.0 radius 0.4
+#{ id133 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id134 = Id("body") }
+rotate body { id134 } about z angle 30
+subtract body { id133 } from body { id134 }
+body { id134 } name "cell 6"
+move body { id134 } midpoint location -1.5 0.0 4.0
+cylinder height 2.0 radius 0.4
+#{ id135 = Id("body") }
+body { id135 } name "cell 5"
+move body { id135 } midpoint location -1.5 0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id136 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id137 = Id("body") }
+rotate body { id137 } about z angle 30
+subtract body { id136 } from body { id137 }
+body { id137 } name "cell 6"
+move body { id137 } midpoint location -1.5 0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id138 = Id("body") }
+body { id138 } name "cell 5"
+move body { id138 } midpoint location -0.75 1.299038105676658 4.0
+cylinder height 2.0 radius 0.4
+#{ id139 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id140 = Id("body") }
+rotate body { id140 } about z angle 30
+subtract body { id139 } from body { id140 }
+body { id140 } name "cell 6"
+move body { id140 } midpoint location -0.75 1.299038105676658 4.0
+create prism height 2.0 sides 6 radius 0.5
+#{ id141 = Id("body") }
+rotate body { id141 } about z angle 30
+body { id141 } name "cell 4"
+move body { id141 } midpoint location 5.302876193624534e-17 0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id142 = Id("body") }
+body { id142 } name "cell 5"
+move body { id142 } midpoint location 0.7499999999999999 0.4330127018922193 4.0
+cylinder height 2.0 radius 0.4
+#{ id143 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id144 = Id("body") }
+rotate body { id144 } about z angle 30
+subtract body { id143 } from body { id144 }
+body { id144 } name "cell 6"
+move body { id144 } midpoint location 0.7499999999999999 0.4330127018922193 4.0
+cylinder height 2.0 radius 0.4
+#{ id145 = Id("body") }
+body { id145 } name "cell 5"
+move body { id145 } midpoint location 0.75 -0.43301270189221913 4.0
+cylinder height 2.0 radius 0.4
+#{ id146 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id147 = Id("body") }
+rotate body { id147 } about z angle 30
+subtract body { id146 } from body { id147 }
+body { id147 } name "cell 6"
+move body { id147 } midpoint location 0.75 -0.43301270189221913 4.0
+cylinder height 2.0 radius 0.4
+#{ id148 = Id("body") }
+body { id148 } name "cell 5"
+move body { id148 } midpoint location 5.302876193624534e-17 -0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id149 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id150 = Id("body") }
+rotate body { id150 } about z angle 30
+subtract body { id149 } from body { id150 }
+body { id150 } name "cell 6"
+move body { id150 } midpoint location 5.302876193624534e-17 -0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id151 = Id("body") }
+body { id151 } name "cell 5"
+move body { id151 } midpoint location -0.7499999999999998 -0.4330127018922196 4.0
+cylinder height 2.0 radius 0.4
+#{ id152 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id153 = Id("body") }
+rotate body { id153 } about z angle 30
+subtract body { id152 } from body { id153 }
+body { id153 } name "cell 6"
+move body { id153 } midpoint location -0.7499999999999998 -0.4330127018922196 4.0
+cylinder height 2.0 radius 0.4
+#{ id154 = Id("body") }
+body { id154 } name "cell 5"
+move body { id154 } midpoint location -0.7499999999999999 0.4330127018922194 4.0
+cylinder height 2.0 radius 0.4
+#{ id155 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id156 = Id("body") }
+rotate body { id156 } about z angle 30
+subtract body { id155 } from body { id156 }
+body { id156 } name "cell 6"
+move body { id156 } midpoint location -0.7499999999999999 0.4330127018922194 4.0
+cylinder height 2.0 radius 0.4
+#{ id157 = Id("body") }
+body { id157 } name "cell 5"
+move body { id157 } midpoint location 0.0 0.0 4.0
+cylinder height 2.0 radius 0.4
+#{ id158 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id159 = Id("body") }
+rotate body { id159 } about z angle 30
+subtract body { id158 } from body { id159 }
+body { id159 } name "cell 6"
+move body { id159 } midpoint location 0.0 0.0 4.0
diff --git a/test/conftest.py b/test/conftest.py
new file mode 100644
index 0000000..81974a6
--- /dev/null
+++ b/test/conftest.py
@@ -0,0 +1,23 @@
+import pytest
+
+test_config = {'update': False}
+
+
+def pytest_addoption(parser):
+ parser.addoption('--update', action='store_true')
+
+
+def pytest_configure(config):
+ opts = ['update']
+ for opt in opts:
+ if config.getoption(opt) is not None:
+ test_config[opt] = config.getoption(opt)
+
+
+@pytest.fixture
+def run_in_tmpdir(tmpdir):
+ orig = tmpdir.chdir()
+ try:
+ yield
+ finally:
+ orig.chdir()
diff --git a/test/cylinder.jou b/test/cylinder.jou
new file mode 100644
index 0000000..d886fc9
--- /dev/null
+++ b/test/cylinder.jou
@@ -0,0 +1,10 @@
+set graphics off
+set journal off
+#CELL 3
+cylinder height 500 radius 6.0
+#{ id1 = Id("body") }
+body { id1 } rotate 0.0 about Z
+body { id1 } rotate 45.0 about Y
+body { id1 } rotate 35.264389682754654 about X
+body { id1 } move 5.0 5.0 5.0
+body { id1 } name "Cell_3"
diff --git a/test/geometry.xml b/test/geometry.xml
new file mode 100644
index 0000000..c07bb26
--- /dev/null
+++ b/test/geometry.xml
@@ -0,0 +1,47 @@
+
+
+ |
+ |
+ |
+ |
+ |
+ |
+
+ 1.0 2.0
+ 3
+ 0.0 0.0 0.0
+
+ 3
+ 4 4
+4 3 4
+ 4 4
+4 4 4
+ 4 4
+4 4 4
+ 4 4
+ 4
+ 3
+ 1 1
+1 3 1
+ 1 1
+1 1 1
+ 1 1
+1 1 1
+ 1 1
+ 1
+ 3
+ 4 4
+4 3 4
+ 4 4
+4 4 4
+ 4 4
+4 4 4
+ 4 4
+ 4
+
+
+
+
+
+
+
diff --git a/test/gold/assembly.jou b/test/gold/assembly.jou
index ca412d7..465259d 100644
--- a/test/gold/assembly.jou
+++ b/test/gold/assembly.jou
@@ -1,645 +1,8095 @@
set graphics off
set journal off
-#CELL 1
-create prism height 2.0 sides 6 radius 0.5
+#CELL 7
+cylinder height 500 radius 0.39218
#{ id1 = Id("body") }
-rotate body { id1 } about z angle 30
-body { id1 } name "cell 4"
-move body { id1 } midpoint location 0.0 1.7320508075688772 0.0
-cylinder height 2.0 radius 0.4
+body { id1 } name "Cell_1"
+move body { id1 } midpoint location -10.08 -10.08 0 except z
+cylinder height 500 radius 0.39218
#{ id2 = Id("body") }
-body { id2 } name "cell 5"
-move body { id2 } midpoint location 0.75 1.299038105676658 0.0
-cylinder height 2.0 radius 0.4
+brick x 1.26 y 1.26 z 500
#{ id3 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+subtract body { id2 } from body { id3 }
+cylinder height 500 radius 0.4572
#{ id4 = Id("body") }
-rotate body { id4 } about z angle 30
-subtract body { id3 } from body { id4 }
-body { id4 } name "cell 6"
-move body { id4 } midpoint location 0.75 1.299038105676658 0.0
-cylinder height 2.0 radius 0.4
#{ id5 = Id("body") }
-body { id5 } name "cell 5"
-move body { id5 } midpoint location 1.5 0.8660254037844386 0.0
-cylinder height 2.0 radius 0.4
+intersect body { id3 } { id4 }
#{ id6 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
-#{ id7 = Id("body") }
-rotate body { id7 } about z angle 30
-subtract body { id6 } from body { id7 }
-body { id7 } name "cell 6"
-move body { id7 } midpoint location 1.5 0.8660254037844386 0.0
-cylinder height 2.0 radius 0.4
+#{id7 = ( id5 == id6 ) ? id4 : id6}
+brick x 1.26 y 1.26 z 500
#{ id8 = Id("body") }
-body { id8 } name "cell 5"
-move body { id8 } midpoint location 1.5 0.0 0.0
-cylinder height 2.0 radius 0.4
+intersect body { id7 } { id8 }
#{ id9 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+body { id9 } name "Cell_2"
+move body { id9 } midpoint location -10.08 -10.08 0 except z
+cylinder height 500 radius 0.4572
#{ id10 = Id("body") }
-rotate body { id10 } about z angle 30
-subtract body { id9 } from body { id10 }
-body { id10 } name "cell 6"
-move body { id10 } midpoint location 1.5 0.0 0.0
-cylinder height 2.0 radius 0.4
+brick x 1.26 y 1.26 z 500
#{ id11 = Id("body") }
-body { id11 } name "cell 5"
-move body { id11 } midpoint location 1.5 -0.8660254037844386 0.0
-cylinder height 2.0 radius 0.4
+subtract body { id10 } from body { id11 }
+body { id11 } name "Cell_3"
+move body { id11 } midpoint location -10.08 -10.08 0 except z
+cylinder height 500 radius 0.39218
#{ id12 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+body { id12 } name "Cell_1"
+move body { id12 } midpoint location -8.82 -10.08 0 except z
+cylinder height 500 radius 0.39218
#{ id13 = Id("body") }
-rotate body { id13 } about z angle 30
-subtract body { id12 } from body { id13 }
-body { id13 } name "cell 6"
-move body { id13 } midpoint location 1.5 -0.8660254037844386 0.0
-cylinder height 2.0 radius 0.4
+brick x 1.26 y 1.26 z 500
#{ id14 = Id("body") }
-body { id14 } name "cell 5"
-move body { id14 } midpoint location 0.75 -1.299038105676658 0.0
-cylinder height 2.0 radius 0.4
+subtract body { id13 } from body { id14 }
+cylinder height 500 radius 0.4572
#{ id15 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
#{ id16 = Id("body") }
-rotate body { id16 } about z angle 30
-subtract body { id15 } from body { id16 }
-body { id16 } name "cell 6"
-move body { id16 } midpoint location 0.75 -1.299038105676658 0.0
-cylinder height 2.0 radius 0.4
+intersect body { id14 } { id15 }
#{ id17 = Id("body") }
-body { id17 } name "cell 5"
-move body { id17 } midpoint location 0.0 -1.7320508075688772 0.0
-cylinder height 2.0 radius 0.4
-#{ id18 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+#{id18 = ( id16 == id17 ) ? id15 : id17}
+brick x 1.26 y 1.26 z 500
#{ id19 = Id("body") }
-rotate body { id19 } about z angle 30
-subtract body { id18 } from body { id19 }
-body { id19 } name "cell 6"
-move body { id19 } midpoint location 0.0 -1.7320508075688772 0.0
-cylinder height 2.0 radius 0.4
+intersect body { id18 } { id19 }
#{ id20 = Id("body") }
-body { id20 } name "cell 5"
-move body { id20 } midpoint location -0.75 -1.299038105676658 0.0
-cylinder height 2.0 radius 0.4
+body { id20 } name "Cell_2"
+move body { id20 } midpoint location -8.82 -10.08 0 except z
+cylinder height 500 radius 0.4572
#{ id21 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+brick x 1.26 y 1.26 z 500
#{ id22 = Id("body") }
-rotate body { id22 } about z angle 30
subtract body { id21 } from body { id22 }
-body { id22 } name "cell 6"
-move body { id22 } midpoint location -0.75 -1.299038105676658 0.0
-cylinder height 2.0 radius 0.4
+body { id22 } name "Cell_3"
+move body { id22 } midpoint location -8.82 -10.08 0 except z
+cylinder height 500 radius 0.39218
#{ id23 = Id("body") }
-body { id23 } name "cell 5"
-move body { id23 } midpoint location -1.5 -0.8660254037844386 0.0
-cylinder height 2.0 radius 0.4
+body { id23 } name "Cell_1"
+move body { id23 } midpoint location -7.5600000000000005 -10.08 0 except z
+cylinder height 500 radius 0.39218
#{ id24 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+brick x 1.26 y 1.26 z 500
#{ id25 = Id("body") }
-rotate body { id25 } about z angle 30
subtract body { id24 } from body { id25 }
-body { id25 } name "cell 6"
-move body { id25 } midpoint location -1.5 -0.8660254037844386 0.0
-cylinder height 2.0 radius 0.4
+cylinder height 500 radius 0.4572
#{ id26 = Id("body") }
-body { id26 } name "cell 5"
-move body { id26 } midpoint location -1.5 0.0 0.0
-cylinder height 2.0 radius 0.4
#{ id27 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+intersect body { id25 } { id26 }
#{ id28 = Id("body") }
-rotate body { id28 } about z angle 30
-subtract body { id27 } from body { id28 }
-body { id28 } name "cell 6"
-move body { id28 } midpoint location -1.5 0.0 0.0
-cylinder height 2.0 radius 0.4
-#{ id29 = Id("body") }
-body { id29 } name "cell 5"
-move body { id29 } midpoint location -1.5 0.8660254037844386 0.0
-cylinder height 2.0 radius 0.4
+#{id29 = ( id27 == id28 ) ? id26 : id28}
+brick x 1.26 y 1.26 z 500
#{ id30 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+intersect body { id29 } { id30 }
#{ id31 = Id("body") }
-rotate body { id31 } about z angle 30
-subtract body { id30 } from body { id31 }
-body { id31 } name "cell 6"
-move body { id31 } midpoint location -1.5 0.8660254037844386 0.0
-cylinder height 2.0 radius 0.4
+body { id31 } name "Cell_2"
+move body { id31 } midpoint location -7.5600000000000005 -10.08 0 except z
+cylinder height 500 radius 0.4572
#{ id32 = Id("body") }
-body { id32 } name "cell 5"
-move body { id32 } midpoint location -0.75 1.299038105676658 0.0
-cylinder height 2.0 radius 0.4
+brick x 1.26 y 1.26 z 500
#{ id33 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+subtract body { id32 } from body { id33 }
+body { id33 } name "Cell_3"
+move body { id33 } midpoint location -7.5600000000000005 -10.08 0 except z
+cylinder height 500 radius 0.39218
#{ id34 = Id("body") }
-rotate body { id34 } about z angle 30
-subtract body { id33 } from body { id34 }
-body { id34 } name "cell 6"
-move body { id34 } midpoint location -0.75 1.299038105676658 0.0
-create prism height 2.0 sides 6 radius 0.5
+body { id34 } name "Cell_1"
+move body { id34 } midpoint location -6.3 -10.08 0 except z
+cylinder height 500 radius 0.39218
#{ id35 = Id("body") }
-rotate body { id35 } about z angle 30
-body { id35 } name "cell 4"
-move body { id35 } midpoint location 5.302876193624534e-17 0.8660254037844386 0.0
-cylinder height 2.0 radius 0.4
+brick x 1.26 y 1.26 z 500
#{ id36 = Id("body") }
-body { id36 } name "cell 5"
-move body { id36 } midpoint location 0.7499999999999999 0.4330127018922193 0.0
-cylinder height 2.0 radius 0.4
+subtract body { id35 } from body { id36 }
+cylinder height 500 radius 0.4572
#{ id37 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
#{ id38 = Id("body") }
-rotate body { id38 } about z angle 30
-subtract body { id37 } from body { id38 }
-body { id38 } name "cell 6"
-move body { id38 } midpoint location 0.7499999999999999 0.4330127018922193 0.0
-cylinder height 2.0 radius 0.4
+intersect body { id36 } { id37 }
#{ id39 = Id("body") }
-body { id39 } name "cell 5"
-move body { id39 } midpoint location 0.75 -0.43301270189221913 0.0
-cylinder height 2.0 radius 0.4
-#{ id40 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+#{id40 = ( id38 == id39 ) ? id37 : id39}
+brick x 1.26 y 1.26 z 500
#{ id41 = Id("body") }
-rotate body { id41 } about z angle 30
-subtract body { id40 } from body { id41 }
-body { id41 } name "cell 6"
-move body { id41 } midpoint location 0.75 -0.43301270189221913 0.0
-cylinder height 2.0 radius 0.4
+intersect body { id40 } { id41 }
#{ id42 = Id("body") }
-body { id42 } name "cell 5"
-move body { id42 } midpoint location 5.302876193624534e-17 -0.8660254037844386 0.0
-cylinder height 2.0 radius 0.4
+body { id42 } name "Cell_2"
+move body { id42 } midpoint location -6.3 -10.08 0 except z
+cylinder height 500 radius 0.4572
#{ id43 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+brick x 1.26 y 1.26 z 500
#{ id44 = Id("body") }
-rotate body { id44 } about z angle 30
subtract body { id43 } from body { id44 }
-body { id44 } name "cell 6"
-move body { id44 } midpoint location 5.302876193624534e-17 -0.8660254037844386 0.0
-cylinder height 2.0 radius 0.4
+body { id44 } name "Cell_3"
+move body { id44 } midpoint location -6.3 -10.08 0 except z
+cylinder height 500 radius 0.39218
#{ id45 = Id("body") }
-body { id45 } name "cell 5"
-move body { id45 } midpoint location -0.7499999999999998 -0.4330127018922196 0.0
-cylinder height 2.0 radius 0.4
+body { id45 } name "Cell_1"
+move body { id45 } midpoint location -5.04 -10.08 0 except z
+cylinder height 500 radius 0.39218
#{ id46 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+brick x 1.26 y 1.26 z 500
#{ id47 = Id("body") }
-rotate body { id47 } about z angle 30
subtract body { id46 } from body { id47 }
-body { id47 } name "cell 6"
-move body { id47 } midpoint location -0.7499999999999998 -0.4330127018922196 0.0
-cylinder height 2.0 radius 0.4
+cylinder height 500 radius 0.4572
#{ id48 = Id("body") }
-body { id48 } name "cell 5"
-move body { id48 } midpoint location -0.7499999999999999 0.4330127018922194 0.0
-cylinder height 2.0 radius 0.4
#{ id49 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+intersect body { id47 } { id48 }
#{ id50 = Id("body") }
-rotate body { id50 } about z angle 30
-subtract body { id49 } from body { id50 }
-body { id50 } name "cell 6"
-move body { id50 } midpoint location -0.7499999999999999 0.4330127018922194 0.0
-cylinder height 2.0 radius 0.4
-#{ id51 = Id("body") }
-body { id51 } name "cell 5"
-move body { id51 } midpoint location 0.0 0.0 0.0
-cylinder height 2.0 radius 0.4
+#{id51 = ( id49 == id50 ) ? id48 : id50}
+brick x 1.26 y 1.26 z 500
#{ id52 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+intersect body { id51 } { id52 }
#{ id53 = Id("body") }
-rotate body { id53 } about z angle 30
-subtract body { id52 } from body { id53 }
-body { id53 } name "cell 6"
-move body { id53 } midpoint location 0.0 0.0 0.0
-create prism height 2.0 sides 6 radius 0.5
+body { id53 } name "Cell_2"
+move body { id53 } midpoint location -5.04 -10.08 0 except z
+cylinder height 500 radius 0.4572
#{ id54 = Id("body") }
-rotate body { id54 } about z angle 30
-body { id54 } name "cell 4"
-move body { id54 } midpoint location 0.0 1.7320508075688772 2.0
-cylinder height 2.0 radius 0.4
+brick x 1.26 y 1.26 z 500
#{ id55 = Id("body") }
-body { id55 } name "cell 2"
-move body { id55 } midpoint location 0.75 1.299038105676658 2.0
-cylinder height 2.0 radius 0.4
+subtract body { id54 } from body { id55 }
+body { id55 } name "Cell_3"
+move body { id55 } midpoint location -5.04 -10.08 0 except z
+cylinder height 500 radius 0.39218
#{ id56 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+body { id56 } name "Cell_1"
+move body { id56 } midpoint location -3.7800000000000002 -10.08 0 except z
+cylinder height 500 radius 0.39218
#{ id57 = Id("body") }
-rotate body { id57 } about z angle 30
-subtract body { id56 } from body { id57 }
-body { id57 } name "cell 3"
-move body { id57 } midpoint location 0.75 1.299038105676658 2.0
-cylinder height 2.0 radius 0.4
+brick x 1.26 y 1.26 z 500
#{ id58 = Id("body") }
-body { id58 } name "cell 2"
-move body { id58 } midpoint location 1.5 0.8660254037844386 2.0
-cylinder height 2.0 radius 0.4
+subtract body { id57 } from body { id58 }
+cylinder height 500 radius 0.4572
#{ id59 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
#{ id60 = Id("body") }
-rotate body { id60 } about z angle 30
-subtract body { id59 } from body { id60 }
-body { id60 } name "cell 3"
-move body { id60 } midpoint location 1.5 0.8660254037844386 2.0
-cylinder height 2.0 radius 0.4
+intersect body { id58 } { id59 }
#{ id61 = Id("body") }
-body { id61 } name "cell 2"
-move body { id61 } midpoint location 1.5 0.0 2.0
-cylinder height 2.0 radius 0.4
-#{ id62 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
+#{id62 = ( id60 == id61 ) ? id59 : id61}
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#{ id63 = Id("body") }
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-body { id63 } name "cell 3"
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#{ id64 = Id("body") }
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#{ id65 = Id("body") }
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#{ id66 = Id("body") }
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subtract body { id65 } from body { id66 }
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#{ id67 = Id("body") }
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#{ id68 = Id("body") }
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#{ id69 = Id("body") }
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subtract body { id68 } from body { id69 }
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#{ id70 = Id("body") }
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#{ id71 = Id("body") }
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#{ id72 = Id("body") }
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#{ id74 = Id("body") }
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#{ id76 = Id("body") }
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#{ id77 = Id("body") }
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#{ id78 = Id("body") }
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#{ id79 = Id("body") }
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#{ id80 = Id("body") }
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#{ id81 = Id("body") }
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#{ id82 = Id("body") }
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#{ id83 = Id("body") }
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#{ id85 = Id("body") }
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#{ id86 = Id("body") }
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#{ id87 = Id("body") }
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#{ id88 = Id("body") }
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#{ id89 = Id("body") }
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#{ id90 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
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#{ id91 = Id("body") }
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subtract body { id90 } from body { id91 }
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#{ id92 = Id("body") }
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#{ id93 = Id("body") }
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#{ id94 = Id("body") }
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#{ id96 = Id("body") }
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#{ id97 = Id("body") }
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#{ id98 = Id("body") }
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#{ id99 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
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#{ id100 = Id("body") }
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#{ id101 = Id("body") }
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#{ id102 = Id("body") }
-create prism height 2.0 sides 6 radius 0.5
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#{ id103 = Id("body") }
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#{ id104 = Id("body") }
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#{ id105 = Id("body") }
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#{ id107 = Id("body") }
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#{ id108 = Id("body") }
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#{ id109 = Id("body") }
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#{ id110 = Id("body") }
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subtract body { id109 } from body { id110 }
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#{ id111 = Id("body") }
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#{ id112 = Id("body") }
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#{ id113 = Id("body") }
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subtract body { id112 } from body { id113 }
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#{ id114 = Id("body") }
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#{ id115 = Id("body") }
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#{ id118 = Id("body") }
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#{ id120 = Id("body") }
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#{ id121 = Id("body") }
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#{ id122 = Id("body") }
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#{ id123 = Id("body") }
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#{ id125 = Id("body") }
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#{ id126 = Id("body") }
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#{ id134 = Id("body") }
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#{ id136 = Id("body") }
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#{ id143 = Id("body") }
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#{ id144 = Id("body") }
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#{ id145 = Id("body") }
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#{ id146 = Id("body") }
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#{ id147 = Id("body") }
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#{ id148 = Id("body") }
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#{ id149 = Id("body") }
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#{ id152 = Id("body") }
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+#{ id3137 = Id("body") }
+brick x 1.26 y 1.26 z 500
+#{ id3138 = Id("body") }
+subtract body { id3137 } from body { id3138 }
+cylinder height 500 radius 0.4572
+#{ id3139 = Id("body") }
+#{ id3140 = Id("body") }
+intersect body { id3138 } { id3139 }
+#{ id3141 = Id("body") }
+#{id3142 = ( id3140 == id3141 ) ? id3139 : id3141}
+brick x 1.26 y 1.26 z 500
+#{ id3143 = Id("body") }
+intersect body { id3142 } { id3143 }
+#{ id3144 = Id("body") }
+body { id3144 } name "Cell_2"
+move body { id3144 } midpoint location 6.299999999999999 10.08 0 except z
+cylinder height 500 radius 0.4572
+#{ id3145 = Id("body") }
+brick x 1.26 y 1.26 z 500
+#{ id3146 = Id("body") }
+subtract body { id3145 } from body { id3146 }
+body { id3146 } name "Cell_3"
+move body { id3146 } midpoint location 6.299999999999999 10.08 0 except z
+cylinder height 500 radius 0.39218
+#{ id3147 = Id("body") }
+body { id3147 } name "Cell_1"
+move body { id3147 } midpoint location 7.5600000000000005 10.08 0 except z
+cylinder height 500 radius 0.39218
+#{ id3148 = Id("body") }
+brick x 1.26 y 1.26 z 500
+#{ id3149 = Id("body") }
+subtract body { id3148 } from body { id3149 }
+cylinder height 500 radius 0.4572
+#{ id3150 = Id("body") }
+#{ id3151 = Id("body") }
+intersect body { id3149 } { id3150 }
+#{ id3152 = Id("body") }
+#{id3153 = ( id3151 == id3152 ) ? id3150 : id3152}
+brick x 1.26 y 1.26 z 500
+#{ id3154 = Id("body") }
+intersect body { id3153 } { id3154 }
+#{ id3155 = Id("body") }
+body { id3155 } name "Cell_2"
+move body { id3155 } midpoint location 7.5600000000000005 10.08 0 except z
+cylinder height 500 radius 0.4572
+#{ id3156 = Id("body") }
+brick x 1.26 y 1.26 z 500
+#{ id3157 = Id("body") }
+subtract body { id3156 } from body { id3157 }
+body { id3157 } name "Cell_3"
+move body { id3157 } midpoint location 7.5600000000000005 10.08 0 except z
+cylinder height 500 radius 0.39218
+#{ id3158 = Id("body") }
+body { id3158 } name "Cell_1"
+move body { id3158 } midpoint location 8.819999999999999 10.08 0 except z
+cylinder height 500 radius 0.39218
+#{ id3159 = Id("body") }
+brick x 1.26 y 1.26 z 500
+#{ id3160 = Id("body") }
+subtract body { id3159 } from body { id3160 }
+cylinder height 500 radius 0.4572
+#{ id3161 = Id("body") }
+#{ id3162 = Id("body") }
+intersect body { id3160 } { id3161 }
+#{ id3163 = Id("body") }
+#{id3164 = ( id3162 == id3163 ) ? id3161 : id3163}
+brick x 1.26 y 1.26 z 500
+#{ id3165 = Id("body") }
+intersect body { id3164 } { id3165 }
+#{ id3166 = Id("body") }
+body { id3166 } name "Cell_2"
+move body { id3166 } midpoint location 8.819999999999999 10.08 0 except z
+cylinder height 500 radius 0.4572
+#{ id3167 = Id("body") }
+brick x 1.26 y 1.26 z 500
+#{ id3168 = Id("body") }
+subtract body { id3167 } from body { id3168 }
+body { id3168 } name "Cell_3"
+move body { id3168 } midpoint location 8.819999999999999 10.08 0 except z
+cylinder height 500 radius 0.39218
+#{ id3169 = Id("body") }
+body { id3169 } name "Cell_1"
+move body { id3169 } midpoint location 10.08 10.08 0 except z
+cylinder height 500 radius 0.39218
+#{ id3170 = Id("body") }
+brick x 1.26 y 1.26 z 500
+#{ id3171 = Id("body") }
+subtract body { id3170 } from body { id3171 }
+cylinder height 500 radius 0.4572
+#{ id3172 = Id("body") }
+#{ id3173 = Id("body") }
+intersect body { id3171 } { id3172 }
+#{ id3174 = Id("body") }
+#{id3175 = ( id3173 == id3174 ) ? id3172 : id3174}
+brick x 1.26 y 1.26 z 500
+#{ id3176 = Id("body") }
+intersect body { id3175 } { id3176 }
+#{ id3177 = Id("body") }
+body { id3177 } name "Cell_2"
+move body { id3177 } midpoint location 10.08 10.08 0 except z
+cylinder height 500 radius 0.4572
+#{ id3178 = Id("body") }
+brick x 1.26 y 1.26 z 500
+#{ id3179 = Id("body") }
+subtract body { id3178 } from body { id3179 }
+body { id3179 } name "Cell_3"
+move body { id3179 } midpoint location 10.08 10.08 0 except z
diff --git a/test/gold/cylinder.jou b/test/gold/cylinder.jou
new file mode 100644
index 0000000..6cf2377
--- /dev/null
+++ b/test/gold/cylinder.jou
@@ -0,0 +1,9 @@
+set graphics off
+set journal off
+#CELL 3
+cylinder height 500 radius 6.0
+#{ id1 = Id("body") }
+body { id1 } rotate 90.0 about Y
+body { id1 } rotate 45.0 about Z
+body { id1 } name "Cell_3"
+group "mat:void" add body { id1 }
diff --git a/test/gold/pincell.jou b/test/gold/pincell.jou
index c16552b..d836cc1 100644
--- a/test/gold/pincell.jou
+++ b/test/gold/pincell.jou
@@ -4,7 +4,7 @@ set journal off
cylinder height 500 radius 0.39218
#{ id1 = Id("body") }
body { id1 } name "Cell_1"
-group "Material_1" add body { id1 }
+group "mat:UO2 fuel at 2.4% wt enrichme" add body { id1 }
#CELL 2
cylinder height 500 radius 0.39218
#{ id2 = Id("body") }
@@ -18,7 +18,7 @@ intersect body { id3 } { id4 }
#{ id6 = Id("body") }
#{id7 = ( id5 == id6 ) ? id4 : id6}
body { id7 } name "Cell_2"
-group "Material_2" add body { id7 }
+group "mat:Helium for gap" add body { id7 }
#CELL 3
cylinder height 500 radius 0.40005
#{ id8 = Id("body") }
@@ -32,7 +32,7 @@ intersect body { id9 } { id10 }
#{ id12 = Id("body") }
#{id13 = ( id11 == id12 ) ? id10 : id12}
body { id13 } name "Cell_3"
-group "Material_3" add body { id13 }
+group "mat:Zircaloy 4" add body { id13 }
#CELL 4
cylinder height 500 radius 0.4572
#{ id14 = Id("body") }
@@ -68,4 +68,4 @@ intersect body { id27 } { id28 }
#{ id30 = Id("body") }
#{id31 = ( id29 == id30 ) ? id28 : id30}
body { id31 } name "Cell_4"
-group "Material_4" add body { id31 }
+group "mat:Borated water" add body { id31 }
diff --git a/test/gold/pincell_cell1.jou b/test/gold/pincell_cell1.jou
index 37a6924..3dcf1f7 100644
--- a/test/gold/pincell_cell1.jou
+++ b/test/gold/pincell_cell1.jou
@@ -2,4 +2,4 @@
cylinder height 500 radius 0.39218
#{ id1 = Id("body") }
body { id1 } name "Cell_1"
-group "Material_1" add body { id1 }
+group "mat:UO2 fuel at 2.4% wt enrichme" add body { id1 }
diff --git a/test/gold/pincell_cell2.jou b/test/gold/pincell_cell2.jou
index 17bb5d3..d9d38d5 100644
--- a/test/gold/pincell_cell2.jou
+++ b/test/gold/pincell_cell2.jou
@@ -11,4 +11,4 @@ intersect body { id3 } { id4 }
#{ id6 = Id("body") }
#{id7 = ( id5 == id6 ) ? id4 : id6}
body { id7 } name "Cell_2"
-group "Material_2" add body { id7 }
+group "mat:Helium for gap" add body { id7 }
diff --git a/test/gold/pincell_cell3.jou b/test/gold/pincell_cell3.jou
index 6221709..ab0f7ae 100644
--- a/test/gold/pincell_cell3.jou
+++ b/test/gold/pincell_cell3.jou
@@ -11,4 +11,4 @@ intersect body { id9 } { id10 }
#{ id12 = Id("body") }
#{id13 = ( id11 == id12 ) ? id10 : id12}
body { id13 } name "Cell_3"
-group "Material_3" add body { id13 }
+group "mat:Zircaloy 4" add body { id13 }
diff --git a/test/gold/pincell_cell4.jou b/test/gold/pincell_cell4.jou
index 46846f7..5d5be87 100644
--- a/test/gold/pincell_cell4.jou
+++ b/test/gold/pincell_cell4.jou
@@ -33,4 +33,4 @@ intersect body { id27 } { id28 }
#{ id30 = Id("body") }
#{id31 = ( id29 == id30 ) ? id28 : id30}
body { id31 } name "Cell_4"
-group "Material_4" add body { id31 }
+group "mat:Borated water" add body { id31 }
diff --git a/test/gold/x_cone.jou b/test/gold/x_cone.jou
new file mode 100644
index 0000000..c7f0acc
--- /dev/null
+++ b/test/gold/x_cone.jou
@@ -0,0 +1,9 @@
+set graphics off
+set journal off
+#CELL 4
+create frustum height 500 radius 50.0 top 0
+#{ id1 = Id("body") }
+rotate body { id1 } about y angle 90
+body { id1 } move 30.0 3.0 5.0
+body { id1 } name "Cell_4"
+group "mat:void" add body { id1 }
diff --git a/test/gold/x_torus.jou b/test/gold/x_torus.jou
new file mode 100644
index 0000000..ea404e1
--- /dev/null
+++ b/test/gold/x_torus.jou
@@ -0,0 +1,9 @@
+set graphics off
+set journal off
+#CELL 7
+torus major radius 5.0 minor radius 2.0
+#{ id1 = Id("body") }
+rotate body { id1 } about y angle 90
+body { id1 } move 10.0 10.0 10.0
+body { id1 } name "Cell_7"
+group "mat:void" add body { id1 }
diff --git a/test/gold/xcylinder.jou b/test/gold/xcylinder.jou
new file mode 100644
index 0000000..c9cadc9
--- /dev/null
+++ b/test/gold/xcylinder.jou
@@ -0,0 +1,9 @@
+set graphics off
+set journal off
+#CELL 1
+cylinder height 500 radius 1.0
+#{ id1 = Id("body") }
+rotate body { id1 } about y angle 90
+body { id1 } move 0 10.0 5.0
+body { id1 } name "Cell_1"
+group "mat:void" add body { id1 }
diff --git a/test/gold/y_cone.jou b/test/gold/y_cone.jou
new file mode 100644
index 0000000..5f77230
--- /dev/null
+++ b/test/gold/y_cone.jou
@@ -0,0 +1,9 @@
+set graphics off
+set journal off
+#CELL 5
+create frustum height 500 radius 31.622776601683793 top 0
+#{ id1 = Id("body") }
+rotate body { id1 } about x angle 90
+body { id1 } move 40.0 20.0 7.0
+body { id1 } name "Cell_5"
+group "mat:void" add body { id1 }
diff --git a/test/gold/y_torus.jou b/test/gold/y_torus.jou
new file mode 100644
index 0000000..5d1ab93
--- /dev/null
+++ b/test/gold/y_torus.jou
@@ -0,0 +1,9 @@
+set graphics off
+set journal off
+#CELL 8
+torus major radius 5.0 minor radius 2.0
+#{ id1 = Id("body") }
+rotate body { id1 } about x angle 90
+body { id1 } move -10.0 -10.0 -10.0
+body { id1 } name "Cell_8"
+group "mat:void" add body { id1 }
diff --git a/test/gold/ycylinder.jou b/test/gold/ycylinder.jou
new file mode 100644
index 0000000..d554ece
--- /dev/null
+++ b/test/gold/ycylinder.jou
@@ -0,0 +1,9 @@
+set graphics off
+set journal off
+#CELL 2
+cylinder height 500 radius 1.0
+#{ id1 = Id("body") }
+rotate body { id1 } about x angle 90
+body { id1 } move 10.0 0 5.0
+body { id1 } name "Cell_2"
+group "mat:void" add body { id1 }
diff --git a/test/gold/z_cone.jou b/test/gold/z_cone.jou
new file mode 100644
index 0000000..e77b6eb
--- /dev/null
+++ b/test/gold/z_cone.jou
@@ -0,0 +1,8 @@
+set graphics off
+set journal off
+#CELL 6
+create frustum height 500 radius 22.360679774997898 top 0
+#{ id1 = Id("body") }
+body { id1 } move 50.0 10.0 2.0
+body { id1 } name "Cell_6"
+group "mat:void" add body { id1 }
diff --git a/test/gold/z_torus.jou b/test/gold/z_torus.jou
new file mode 100644
index 0000000..1887e7f
--- /dev/null
+++ b/test/gold/z_torus.jou
@@ -0,0 +1,8 @@
+set graphics off
+set journal off
+#CELL 9
+torus major radius 5.0 minor radius 2.0
+#{ id1 = Id("body") }
+body { id1 } move 50.0 50.0 50.0
+body { id1 } name "Cell_9"
+group "mat:void" add body { id1 }
diff --git a/test/lattice-hexagonal.jou b/test/lattice-hexagonal.jou
new file mode 100644
index 0000000..ca412d7
--- /dev/null
+++ b/test/lattice-hexagonal.jou
@@ -0,0 +1,645 @@
+set graphics off
+set journal off
+#CELL 1
+create prism height 2.0 sides 6 radius 0.5
+#{ id1 = Id("body") }
+rotate body { id1 } about z angle 30
+body { id1 } name "cell 4"
+move body { id1 } midpoint location 0.0 1.7320508075688772 0.0
+cylinder height 2.0 radius 0.4
+#{ id2 = Id("body") }
+body { id2 } name "cell 5"
+move body { id2 } midpoint location 0.75 1.299038105676658 0.0
+cylinder height 2.0 radius 0.4
+#{ id3 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id4 = Id("body") }
+rotate body { id4 } about z angle 30
+subtract body { id3 } from body { id4 }
+body { id4 } name "cell 6"
+move body { id4 } midpoint location 0.75 1.299038105676658 0.0
+cylinder height 2.0 radius 0.4
+#{ id5 = Id("body") }
+body { id5 } name "cell 5"
+move body { id5 } midpoint location 1.5 0.8660254037844386 0.0
+cylinder height 2.0 radius 0.4
+#{ id6 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id7 = Id("body") }
+rotate body { id7 } about z angle 30
+subtract body { id6 } from body { id7 }
+body { id7 } name "cell 6"
+move body { id7 } midpoint location 1.5 0.8660254037844386 0.0
+cylinder height 2.0 radius 0.4
+#{ id8 = Id("body") }
+body { id8 } name "cell 5"
+move body { id8 } midpoint location 1.5 0.0 0.0
+cylinder height 2.0 radius 0.4
+#{ id9 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id10 = Id("body") }
+rotate body { id10 } about z angle 30
+subtract body { id9 } from body { id10 }
+body { id10 } name "cell 6"
+move body { id10 } midpoint location 1.5 0.0 0.0
+cylinder height 2.0 radius 0.4
+#{ id11 = Id("body") }
+body { id11 } name "cell 5"
+move body { id11 } midpoint location 1.5 -0.8660254037844386 0.0
+cylinder height 2.0 radius 0.4
+#{ id12 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id13 = Id("body") }
+rotate body { id13 } about z angle 30
+subtract body { id12 } from body { id13 }
+body { id13 } name "cell 6"
+move body { id13 } midpoint location 1.5 -0.8660254037844386 0.0
+cylinder height 2.0 radius 0.4
+#{ id14 = Id("body") }
+body { id14 } name "cell 5"
+move body { id14 } midpoint location 0.75 -1.299038105676658 0.0
+cylinder height 2.0 radius 0.4
+#{ id15 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id16 = Id("body") }
+rotate body { id16 } about z angle 30
+subtract body { id15 } from body { id16 }
+body { id16 } name "cell 6"
+move body { id16 } midpoint location 0.75 -1.299038105676658 0.0
+cylinder height 2.0 radius 0.4
+#{ id17 = Id("body") }
+body { id17 } name "cell 5"
+move body { id17 } midpoint location 0.0 -1.7320508075688772 0.0
+cylinder height 2.0 radius 0.4
+#{ id18 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id19 = Id("body") }
+rotate body { id19 } about z angle 30
+subtract body { id18 } from body { id19 }
+body { id19 } name "cell 6"
+move body { id19 } midpoint location 0.0 -1.7320508075688772 0.0
+cylinder height 2.0 radius 0.4
+#{ id20 = Id("body") }
+body { id20 } name "cell 5"
+move body { id20 } midpoint location -0.75 -1.299038105676658 0.0
+cylinder height 2.0 radius 0.4
+#{ id21 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id22 = Id("body") }
+rotate body { id22 } about z angle 30
+subtract body { id21 } from body { id22 }
+body { id22 } name "cell 6"
+move body { id22 } midpoint location -0.75 -1.299038105676658 0.0
+cylinder height 2.0 radius 0.4
+#{ id23 = Id("body") }
+body { id23 } name "cell 5"
+move body { id23 } midpoint location -1.5 -0.8660254037844386 0.0
+cylinder height 2.0 radius 0.4
+#{ id24 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id25 = Id("body") }
+rotate body { id25 } about z angle 30
+subtract body { id24 } from body { id25 }
+body { id25 } name "cell 6"
+move body { id25 } midpoint location -1.5 -0.8660254037844386 0.0
+cylinder height 2.0 radius 0.4
+#{ id26 = Id("body") }
+body { id26 } name "cell 5"
+move body { id26 } midpoint location -1.5 0.0 0.0
+cylinder height 2.0 radius 0.4
+#{ id27 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id28 = Id("body") }
+rotate body { id28 } about z angle 30
+subtract body { id27 } from body { id28 }
+body { id28 } name "cell 6"
+move body { id28 } midpoint location -1.5 0.0 0.0
+cylinder height 2.0 radius 0.4
+#{ id29 = Id("body") }
+body { id29 } name "cell 5"
+move body { id29 } midpoint location -1.5 0.8660254037844386 0.0
+cylinder height 2.0 radius 0.4
+#{ id30 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id31 = Id("body") }
+rotate body { id31 } about z angle 30
+subtract body { id30 } from body { id31 }
+body { id31 } name "cell 6"
+move body { id31 } midpoint location -1.5 0.8660254037844386 0.0
+cylinder height 2.0 radius 0.4
+#{ id32 = Id("body") }
+body { id32 } name "cell 5"
+move body { id32 } midpoint location -0.75 1.299038105676658 0.0
+cylinder height 2.0 radius 0.4
+#{ id33 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id34 = Id("body") }
+rotate body { id34 } about z angle 30
+subtract body { id33 } from body { id34 }
+body { id34 } name "cell 6"
+move body { id34 } midpoint location -0.75 1.299038105676658 0.0
+create prism height 2.0 sides 6 radius 0.5
+#{ id35 = Id("body") }
+rotate body { id35 } about z angle 30
+body { id35 } name "cell 4"
+move body { id35 } midpoint location 5.302876193624534e-17 0.8660254037844386 0.0
+cylinder height 2.0 radius 0.4
+#{ id36 = Id("body") }
+body { id36 } name "cell 5"
+move body { id36 } midpoint location 0.7499999999999999 0.4330127018922193 0.0
+cylinder height 2.0 radius 0.4
+#{ id37 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id38 = Id("body") }
+rotate body { id38 } about z angle 30
+subtract body { id37 } from body { id38 }
+body { id38 } name "cell 6"
+move body { id38 } midpoint location 0.7499999999999999 0.4330127018922193 0.0
+cylinder height 2.0 radius 0.4
+#{ id39 = Id("body") }
+body { id39 } name "cell 5"
+move body { id39 } midpoint location 0.75 -0.43301270189221913 0.0
+cylinder height 2.0 radius 0.4
+#{ id40 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id41 = Id("body") }
+rotate body { id41 } about z angle 30
+subtract body { id40 } from body { id41 }
+body { id41 } name "cell 6"
+move body { id41 } midpoint location 0.75 -0.43301270189221913 0.0
+cylinder height 2.0 radius 0.4
+#{ id42 = Id("body") }
+body { id42 } name "cell 5"
+move body { id42 } midpoint location 5.302876193624534e-17 -0.8660254037844386 0.0
+cylinder height 2.0 radius 0.4
+#{ id43 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id44 = Id("body") }
+rotate body { id44 } about z angle 30
+subtract body { id43 } from body { id44 }
+body { id44 } name "cell 6"
+move body { id44 } midpoint location 5.302876193624534e-17 -0.8660254037844386 0.0
+cylinder height 2.0 radius 0.4
+#{ id45 = Id("body") }
+body { id45 } name "cell 5"
+move body { id45 } midpoint location -0.7499999999999998 -0.4330127018922196 0.0
+cylinder height 2.0 radius 0.4
+#{ id46 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id47 = Id("body") }
+rotate body { id47 } about z angle 30
+subtract body { id46 } from body { id47 }
+body { id47 } name "cell 6"
+move body { id47 } midpoint location -0.7499999999999998 -0.4330127018922196 0.0
+cylinder height 2.0 radius 0.4
+#{ id48 = Id("body") }
+body { id48 } name "cell 5"
+move body { id48 } midpoint location -0.7499999999999999 0.4330127018922194 0.0
+cylinder height 2.0 radius 0.4
+#{ id49 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id50 = Id("body") }
+rotate body { id50 } about z angle 30
+subtract body { id49 } from body { id50 }
+body { id50 } name "cell 6"
+move body { id50 } midpoint location -0.7499999999999999 0.4330127018922194 0.0
+cylinder height 2.0 radius 0.4
+#{ id51 = Id("body") }
+body { id51 } name "cell 5"
+move body { id51 } midpoint location 0.0 0.0 0.0
+cylinder height 2.0 radius 0.4
+#{ id52 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id53 = Id("body") }
+rotate body { id53 } about z angle 30
+subtract body { id52 } from body { id53 }
+body { id53 } name "cell 6"
+move body { id53 } midpoint location 0.0 0.0 0.0
+create prism height 2.0 sides 6 radius 0.5
+#{ id54 = Id("body") }
+rotate body { id54 } about z angle 30
+body { id54 } name "cell 4"
+move body { id54 } midpoint location 0.0 1.7320508075688772 2.0
+cylinder height 2.0 radius 0.4
+#{ id55 = Id("body") }
+body { id55 } name "cell 2"
+move body { id55 } midpoint location 0.75 1.299038105676658 2.0
+cylinder height 2.0 radius 0.4
+#{ id56 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id57 = Id("body") }
+rotate body { id57 } about z angle 30
+subtract body { id56 } from body { id57 }
+body { id57 } name "cell 3"
+move body { id57 } midpoint location 0.75 1.299038105676658 2.0
+cylinder height 2.0 radius 0.4
+#{ id58 = Id("body") }
+body { id58 } name "cell 2"
+move body { id58 } midpoint location 1.5 0.8660254037844386 2.0
+cylinder height 2.0 radius 0.4
+#{ id59 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id60 = Id("body") }
+rotate body { id60 } about z angle 30
+subtract body { id59 } from body { id60 }
+body { id60 } name "cell 3"
+move body { id60 } midpoint location 1.5 0.8660254037844386 2.0
+cylinder height 2.0 radius 0.4
+#{ id61 = Id("body") }
+body { id61 } name "cell 2"
+move body { id61 } midpoint location 1.5 0.0 2.0
+cylinder height 2.0 radius 0.4
+#{ id62 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id63 = Id("body") }
+rotate body { id63 } about z angle 30
+subtract body { id62 } from body { id63 }
+body { id63 } name "cell 3"
+move body { id63 } midpoint location 1.5 0.0 2.0
+cylinder height 2.0 radius 0.4
+#{ id64 = Id("body") }
+body { id64 } name "cell 2"
+move body { id64 } midpoint location 1.5 -0.8660254037844386 2.0
+cylinder height 2.0 radius 0.4
+#{ id65 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id66 = Id("body") }
+rotate body { id66 } about z angle 30
+subtract body { id65 } from body { id66 }
+body { id66 } name "cell 3"
+move body { id66 } midpoint location 1.5 -0.8660254037844386 2.0
+cylinder height 2.0 radius 0.4
+#{ id67 = Id("body") }
+body { id67 } name "cell 2"
+move body { id67 } midpoint location 0.75 -1.299038105676658 2.0
+cylinder height 2.0 radius 0.4
+#{ id68 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id69 = Id("body") }
+rotate body { id69 } about z angle 30
+subtract body { id68 } from body { id69 }
+body { id69 } name "cell 3"
+move body { id69 } midpoint location 0.75 -1.299038105676658 2.0
+cylinder height 2.0 radius 0.4
+#{ id70 = Id("body") }
+body { id70 } name "cell 2"
+move body { id70 } midpoint location 0.0 -1.7320508075688772 2.0
+cylinder height 2.0 radius 0.4
+#{ id71 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id72 = Id("body") }
+rotate body { id72 } about z angle 30
+subtract body { id71 } from body { id72 }
+body { id72 } name "cell 3"
+move body { id72 } midpoint location 0.0 -1.7320508075688772 2.0
+cylinder height 2.0 radius 0.4
+#{ id73 = Id("body") }
+body { id73 } name "cell 2"
+move body { id73 } midpoint location -0.75 -1.299038105676658 2.0
+cylinder height 2.0 radius 0.4
+#{ id74 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id75 = Id("body") }
+rotate body { id75 } about z angle 30
+subtract body { id74 } from body { id75 }
+body { id75 } name "cell 3"
+move body { id75 } midpoint location -0.75 -1.299038105676658 2.0
+cylinder height 2.0 radius 0.4
+#{ id76 = Id("body") }
+body { id76 } name "cell 2"
+move body { id76 } midpoint location -1.5 -0.8660254037844386 2.0
+cylinder height 2.0 radius 0.4
+#{ id77 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id78 = Id("body") }
+rotate body { id78 } about z angle 30
+subtract body { id77 } from body { id78 }
+body { id78 } name "cell 3"
+move body { id78 } midpoint location -1.5 -0.8660254037844386 2.0
+cylinder height 2.0 radius 0.4
+#{ id79 = Id("body") }
+body { id79 } name "cell 2"
+move body { id79 } midpoint location -1.5 0.0 2.0
+cylinder height 2.0 radius 0.4
+#{ id80 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id81 = Id("body") }
+rotate body { id81 } about z angle 30
+subtract body { id80 } from body { id81 }
+body { id81 } name "cell 3"
+move body { id81 } midpoint location -1.5 0.0 2.0
+cylinder height 2.0 radius 0.4
+#{ id82 = Id("body") }
+body { id82 } name "cell 2"
+move body { id82 } midpoint location -1.5 0.8660254037844386 2.0
+cylinder height 2.0 radius 0.4
+#{ id83 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id84 = Id("body") }
+rotate body { id84 } about z angle 30
+subtract body { id83 } from body { id84 }
+body { id84 } name "cell 3"
+move body { id84 } midpoint location -1.5 0.8660254037844386 2.0
+cylinder height 2.0 radius 0.4
+#{ id85 = Id("body") }
+body { id85 } name "cell 2"
+move body { id85 } midpoint location -0.75 1.299038105676658 2.0
+cylinder height 2.0 radius 0.4
+#{ id86 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id87 = Id("body") }
+rotate body { id87 } about z angle 30
+subtract body { id86 } from body { id87 }
+body { id87 } name "cell 3"
+move body { id87 } midpoint location -0.75 1.299038105676658 2.0
+create prism height 2.0 sides 6 radius 0.5
+#{ id88 = Id("body") }
+rotate body { id88 } about z angle 30
+body { id88 } name "cell 4"
+move body { id88 } midpoint location 5.302876193624534e-17 0.8660254037844386 2.0
+cylinder height 2.0 radius 0.4
+#{ id89 = Id("body") }
+body { id89 } name "cell 2"
+move body { id89 } midpoint location 0.7499999999999999 0.4330127018922193 2.0
+cylinder height 2.0 radius 0.4
+#{ id90 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id91 = Id("body") }
+rotate body { id91 } about z angle 30
+subtract body { id90 } from body { id91 }
+body { id91 } name "cell 3"
+move body { id91 } midpoint location 0.7499999999999999 0.4330127018922193 2.0
+cylinder height 2.0 radius 0.4
+#{ id92 = Id("body") }
+body { id92 } name "cell 2"
+move body { id92 } midpoint location 0.75 -0.43301270189221913 2.0
+cylinder height 2.0 radius 0.4
+#{ id93 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id94 = Id("body") }
+rotate body { id94 } about z angle 30
+subtract body { id93 } from body { id94 }
+body { id94 } name "cell 3"
+move body { id94 } midpoint location 0.75 -0.43301270189221913 2.0
+cylinder height 2.0 radius 0.4
+#{ id95 = Id("body") }
+body { id95 } name "cell 2"
+move body { id95 } midpoint location 5.302876193624534e-17 -0.8660254037844386 2.0
+cylinder height 2.0 radius 0.4
+#{ id96 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id97 = Id("body") }
+rotate body { id97 } about z angle 30
+subtract body { id96 } from body { id97 }
+body { id97 } name "cell 3"
+move body { id97 } midpoint location 5.302876193624534e-17 -0.8660254037844386 2.0
+cylinder height 2.0 radius 0.4
+#{ id98 = Id("body") }
+body { id98 } name "cell 2"
+move body { id98 } midpoint location -0.7499999999999998 -0.4330127018922196 2.0
+cylinder height 2.0 radius 0.4
+#{ id99 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id100 = Id("body") }
+rotate body { id100 } about z angle 30
+subtract body { id99 } from body { id100 }
+body { id100 } name "cell 3"
+move body { id100 } midpoint location -0.7499999999999998 -0.4330127018922196 2.0
+cylinder height 2.0 radius 0.4
+#{ id101 = Id("body") }
+body { id101 } name "cell 2"
+move body { id101 } midpoint location -0.7499999999999999 0.4330127018922194 2.0
+cylinder height 2.0 radius 0.4
+#{ id102 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id103 = Id("body") }
+rotate body { id103 } about z angle 30
+subtract body { id102 } from body { id103 }
+body { id103 } name "cell 3"
+move body { id103 } midpoint location -0.7499999999999999 0.4330127018922194 2.0
+cylinder height 2.0 radius 0.4
+#{ id104 = Id("body") }
+body { id104 } name "cell 2"
+move body { id104 } midpoint location 0.0 0.0 2.0
+cylinder height 2.0 radius 0.4
+#{ id105 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id106 = Id("body") }
+rotate body { id106 } about z angle 30
+subtract body { id105 } from body { id106 }
+body { id106 } name "cell 3"
+move body { id106 } midpoint location 0.0 0.0 2.0
+create prism height 2.0 sides 6 radius 0.5
+#{ id107 = Id("body") }
+rotate body { id107 } about z angle 30
+body { id107 } name "cell 4"
+move body { id107 } midpoint location 0.0 1.7320508075688772 4.0
+cylinder height 2.0 radius 0.4
+#{ id108 = Id("body") }
+body { id108 } name "cell 5"
+move body { id108 } midpoint location 0.75 1.299038105676658 4.0
+cylinder height 2.0 radius 0.4
+#{ id109 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id110 = Id("body") }
+rotate body { id110 } about z angle 30
+subtract body { id109 } from body { id110 }
+body { id110 } name "cell 6"
+move body { id110 } midpoint location 0.75 1.299038105676658 4.0
+cylinder height 2.0 radius 0.4
+#{ id111 = Id("body") }
+body { id111 } name "cell 5"
+move body { id111 } midpoint location 1.5 0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id112 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id113 = Id("body") }
+rotate body { id113 } about z angle 30
+subtract body { id112 } from body { id113 }
+body { id113 } name "cell 6"
+move body { id113 } midpoint location 1.5 0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id114 = Id("body") }
+body { id114 } name "cell 5"
+move body { id114 } midpoint location 1.5 0.0 4.0
+cylinder height 2.0 radius 0.4
+#{ id115 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id116 = Id("body") }
+rotate body { id116 } about z angle 30
+subtract body { id115 } from body { id116 }
+body { id116 } name "cell 6"
+move body { id116 } midpoint location 1.5 0.0 4.0
+cylinder height 2.0 radius 0.4
+#{ id117 = Id("body") }
+body { id117 } name "cell 5"
+move body { id117 } midpoint location 1.5 -0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id118 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id119 = Id("body") }
+rotate body { id119 } about z angle 30
+subtract body { id118 } from body { id119 }
+body { id119 } name "cell 6"
+move body { id119 } midpoint location 1.5 -0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id120 = Id("body") }
+body { id120 } name "cell 5"
+move body { id120 } midpoint location 0.75 -1.299038105676658 4.0
+cylinder height 2.0 radius 0.4
+#{ id121 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id122 = Id("body") }
+rotate body { id122 } about z angle 30
+subtract body { id121 } from body { id122 }
+body { id122 } name "cell 6"
+move body { id122 } midpoint location 0.75 -1.299038105676658 4.0
+cylinder height 2.0 radius 0.4
+#{ id123 = Id("body") }
+body { id123 } name "cell 5"
+move body { id123 } midpoint location 0.0 -1.7320508075688772 4.0
+cylinder height 2.0 radius 0.4
+#{ id124 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id125 = Id("body") }
+rotate body { id125 } about z angle 30
+subtract body { id124 } from body { id125 }
+body { id125 } name "cell 6"
+move body { id125 } midpoint location 0.0 -1.7320508075688772 4.0
+cylinder height 2.0 radius 0.4
+#{ id126 = Id("body") }
+body { id126 } name "cell 5"
+move body { id126 } midpoint location -0.75 -1.299038105676658 4.0
+cylinder height 2.0 radius 0.4
+#{ id127 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id128 = Id("body") }
+rotate body { id128 } about z angle 30
+subtract body { id127 } from body { id128 }
+body { id128 } name "cell 6"
+move body { id128 } midpoint location -0.75 -1.299038105676658 4.0
+cylinder height 2.0 radius 0.4
+#{ id129 = Id("body") }
+body { id129 } name "cell 5"
+move body { id129 } midpoint location -1.5 -0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id130 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id131 = Id("body") }
+rotate body { id131 } about z angle 30
+subtract body { id130 } from body { id131 }
+body { id131 } name "cell 6"
+move body { id131 } midpoint location -1.5 -0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id132 = Id("body") }
+body { id132 } name "cell 5"
+move body { id132 } midpoint location -1.5 0.0 4.0
+cylinder height 2.0 radius 0.4
+#{ id133 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id134 = Id("body") }
+rotate body { id134 } about z angle 30
+subtract body { id133 } from body { id134 }
+body { id134 } name "cell 6"
+move body { id134 } midpoint location -1.5 0.0 4.0
+cylinder height 2.0 radius 0.4
+#{ id135 = Id("body") }
+body { id135 } name "cell 5"
+move body { id135 } midpoint location -1.5 0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id136 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id137 = Id("body") }
+rotate body { id137 } about z angle 30
+subtract body { id136 } from body { id137 }
+body { id137 } name "cell 6"
+move body { id137 } midpoint location -1.5 0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id138 = Id("body") }
+body { id138 } name "cell 5"
+move body { id138 } midpoint location -0.75 1.299038105676658 4.0
+cylinder height 2.0 radius 0.4
+#{ id139 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id140 = Id("body") }
+rotate body { id140 } about z angle 30
+subtract body { id139 } from body { id140 }
+body { id140 } name "cell 6"
+move body { id140 } midpoint location -0.75 1.299038105676658 4.0
+create prism height 2.0 sides 6 radius 0.5
+#{ id141 = Id("body") }
+rotate body { id141 } about z angle 30
+body { id141 } name "cell 4"
+move body { id141 } midpoint location 5.302876193624534e-17 0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id142 = Id("body") }
+body { id142 } name "cell 5"
+move body { id142 } midpoint location 0.7499999999999999 0.4330127018922193 4.0
+cylinder height 2.0 radius 0.4
+#{ id143 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id144 = Id("body") }
+rotate body { id144 } about z angle 30
+subtract body { id143 } from body { id144 }
+body { id144 } name "cell 6"
+move body { id144 } midpoint location 0.7499999999999999 0.4330127018922193 4.0
+cylinder height 2.0 radius 0.4
+#{ id145 = Id("body") }
+body { id145 } name "cell 5"
+move body { id145 } midpoint location 0.75 -0.43301270189221913 4.0
+cylinder height 2.0 radius 0.4
+#{ id146 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id147 = Id("body") }
+rotate body { id147 } about z angle 30
+subtract body { id146 } from body { id147 }
+body { id147 } name "cell 6"
+move body { id147 } midpoint location 0.75 -0.43301270189221913 4.0
+cylinder height 2.0 radius 0.4
+#{ id148 = Id("body") }
+body { id148 } name "cell 5"
+move body { id148 } midpoint location 5.302876193624534e-17 -0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id149 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id150 = Id("body") }
+rotate body { id150 } about z angle 30
+subtract body { id149 } from body { id150 }
+body { id150 } name "cell 6"
+move body { id150 } midpoint location 5.302876193624534e-17 -0.8660254037844386 4.0
+cylinder height 2.0 radius 0.4
+#{ id151 = Id("body") }
+body { id151 } name "cell 5"
+move body { id151 } midpoint location -0.7499999999999998 -0.4330127018922196 4.0
+cylinder height 2.0 radius 0.4
+#{ id152 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id153 = Id("body") }
+rotate body { id153 } about z angle 30
+subtract body { id152 } from body { id153 }
+body { id153 } name "cell 6"
+move body { id153 } midpoint location -0.7499999999999998 -0.4330127018922196 4.0
+cylinder height 2.0 radius 0.4
+#{ id154 = Id("body") }
+body { id154 } name "cell 5"
+move body { id154 } midpoint location -0.7499999999999999 0.4330127018922194 4.0
+cylinder height 2.0 radius 0.4
+#{ id155 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id156 = Id("body") }
+rotate body { id156 } about z angle 30
+subtract body { id155 } from body { id156 }
+body { id156 } name "cell 6"
+move body { id156 } midpoint location -0.7499999999999999 0.4330127018922194 4.0
+cylinder height 2.0 radius 0.4
+#{ id157 = Id("body") }
+body { id157 } name "cell 5"
+move body { id157 } midpoint location 0.0 0.0 4.0
+cylinder height 2.0 radius 0.4
+#{ id158 = Id("body") }
+create prism height 2.0 sides 6 radius 0.5
+#{ id159 = Id("body") }
+rotate body { id159 } about z angle 30
+subtract body { id158 } from body { id159 }
+body { id159 } name "cell 6"
+move body { id159 } midpoint location 0.0 0.0 4.0
diff --git a/test/local_tests.py b/test/local_tests.py
new file mode 100644
index 0000000..cca6246
--- /dev/null
+++ b/test/local_tests.py
@@ -0,0 +1,33 @@
+import functools
+
+import openmc
+
+from openmc_cad_adapter import to_cubit_journal
+
+from .test_utilities import diff_gold_file
+
+
+def openmc_reset(func):
+ @functools.wraps(func)
+ def wrapper(*args, **kwargs):
+ openmc.reset_auto_ids()
+ func(*args, **kwargs)
+ return wrapper
+
+
+@openmc_reset
+def test_xcylinder(request):
+ x_cyl = openmc.XCylinder(r=1.0, y0=10.0, z0=5.0)
+ g = openmc.Geometry([openmc.Cell(region=-x_cyl)])
+ to_cubit_journal(g, world=(500, 500, 500), filename='xcylinder.jou')
+ diff_gold_file('xcylinder.jou')
+
+
+@openmc_reset
+def test_ycylinder(request):
+ y_cyl = openmc.YCylinder(r=1.0, x0=10.0, z0=5.0)
+ g = openmc.Geometry([openmc.Cell(region=-y_cyl)])
+ to_cubit_journal(g, world=(500, 500, 500), filename='ycylinder.jou')
+ diff_gold_file('ycylinder.jou')
+
+
diff --git a/test/materials.xml b/test/materials.xml
new file mode 100644
index 0000000..b4be91c
--- /dev/null
+++ b/test/materials.xml
@@ -0,0 +1,23 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
diff --git a/test/pincell.jou b/test/pincell.jou
new file mode 100644
index 0000000..c16552b
--- /dev/null
+++ b/test/pincell.jou
@@ -0,0 +1,71 @@
+set graphics off
+set journal off
+#CELL 1
+cylinder height 500 radius 0.39218
+#{ id1 = Id("body") }
+body { id1 } name "Cell_1"
+group "Material_1" add body { id1 }
+#CELL 2
+cylinder height 500 radius 0.39218
+#{ id2 = Id("body") }
+brick x 500 y 500 z 500
+#{ id3 = Id("body") }
+subtract body { id2 } from body { id3 }
+cylinder height 500 radius 0.40005
+#{ id4 = Id("body") }
+#{ id5 = Id("body") }
+intersect body { id3 } { id4 }
+#{ id6 = Id("body") }
+#{id7 = ( id5 == id6 ) ? id4 : id6}
+body { id7 } name "Cell_2"
+group "Material_2" add body { id7 }
+#CELL 3
+cylinder height 500 radius 0.40005
+#{ id8 = Id("body") }
+brick x 500 y 500 z 500
+#{ id9 = Id("body") }
+subtract body { id8 } from body { id9 }
+cylinder height 500 radius 0.4572
+#{ id10 = Id("body") }
+#{ id11 = Id("body") }
+intersect body { id9 } { id10 }
+#{ id12 = Id("body") }
+#{id13 = ( id11 == id12 ) ? id10 : id12}
+body { id13 } name "Cell_3"
+group "Material_3" add body { id13 }
+#CELL 4
+cylinder height 500 radius 0.4572
+#{ id14 = Id("body") }
+brick x 500 y 500 z 500
+#{ id15 = Id("body") }
+subtract body { id14 } from body { id15 }
+brick x 500 y 500 z 500
+#{ id16 = Id("body") }
+section body { id16 } with xplane offset -0.62992
+#{ id17 = Id("body") }
+intersect body { id15 } { id16 }
+#{ id18 = Id("body") }
+#{id19 = ( id17 == id18 ) ? id16 : id18}
+brick x 500 y 500 z 500
+#{ id20 = Id("body") }
+section body { id20 } with xplane offset 0.62992 reverse
+#{ id21 = Id("body") }
+intersect body { id19 } { id20 }
+#{ id22 = Id("body") }
+#{id23 = ( id21 == id22 ) ? id20 : id22}
+brick x 500 y 500 z 500
+#{ id24 = Id("body") }
+section body { id24 } with yplane offset -0.62992
+#{ id25 = Id("body") }
+intersect body { id23 } { id24 }
+#{ id26 = Id("body") }
+#{id27 = ( id25 == id26 ) ? id24 : id26}
+brick x 500 y 500 z 500
+#{ id28 = Id("body") }
+section body { id28 } with yplane offset 0.62992 reverse
+#{ id29 = Id("body") }
+intersect body { id27 } { id28 }
+#{ id30 = Id("body") }
+#{id31 = ( id29 == id30 ) ? id28 : id30}
+body { id31 } name "Cell_4"
+group "Material_4" add body { id31 }
diff --git a/test/pincell_cell1.jou b/test/pincell_cell1.jou
new file mode 100644
index 0000000..37a6924
--- /dev/null
+++ b/test/pincell_cell1.jou
@@ -0,0 +1,5 @@
+#CELL 1
+cylinder height 500 radius 0.39218
+#{ id1 = Id("body") }
+body { id1 } name "Cell_1"
+group "Material_1" add body { id1 }
diff --git a/test/pincell_cell2.jou b/test/pincell_cell2.jou
new file mode 100644
index 0000000..17bb5d3
--- /dev/null
+++ b/test/pincell_cell2.jou
@@ -0,0 +1,14 @@
+#CELL 2
+cylinder height 500 radius 0.39218
+#{ id2 = Id("body") }
+brick x 500 y 500 z 500
+#{ id3 = Id("body") }
+subtract body { id2 } from body { id3 }
+cylinder height 500 radius 0.40005
+#{ id4 = Id("body") }
+#{ id5 = Id("body") }
+intersect body { id3 } { id4 }
+#{ id6 = Id("body") }
+#{id7 = ( id5 == id6 ) ? id4 : id6}
+body { id7 } name "Cell_2"
+group "Material_2" add body { id7 }
diff --git a/test/pincell_cell3.jou b/test/pincell_cell3.jou
new file mode 100644
index 0000000..6221709
--- /dev/null
+++ b/test/pincell_cell3.jou
@@ -0,0 +1,14 @@
+#CELL 3
+cylinder height 500 radius 0.40005
+#{ id8 = Id("body") }
+brick x 500 y 500 z 500
+#{ id9 = Id("body") }
+subtract body { id8 } from body { id9 }
+cylinder height 500 radius 0.4572
+#{ id10 = Id("body") }
+#{ id11 = Id("body") }
+intersect body { id9 } { id10 }
+#{ id12 = Id("body") }
+#{id13 = ( id11 == id12 ) ? id10 : id12}
+body { id13 } name "Cell_3"
+group "Material_3" add body { id13 }
diff --git a/test/pincell_cell4.jou b/test/pincell_cell4.jou
new file mode 100644
index 0000000..46846f7
--- /dev/null
+++ b/test/pincell_cell4.jou
@@ -0,0 +1,36 @@
+#CELL 4
+cylinder height 500 radius 0.4572
+#{ id14 = Id("body") }
+brick x 500 y 500 z 500
+#{ id15 = Id("body") }
+subtract body { id14 } from body { id15 }
+brick x 500 y 500 z 500
+#{ id16 = Id("body") }
+section body { id16 } with xplane offset -0.62992
+#{ id17 = Id("body") }
+intersect body { id15 } { id16 }
+#{ id18 = Id("body") }
+#{id19 = ( id17 == id18 ) ? id16 : id18}
+brick x 500 y 500 z 500
+#{ id20 = Id("body") }
+section body { id20 } with xplane offset 0.62992 reverse
+#{ id21 = Id("body") }
+intersect body { id19 } { id20 }
+#{ id22 = Id("body") }
+#{id23 = ( id21 == id22 ) ? id20 : id22}
+brick x 500 y 500 z 500
+#{ id24 = Id("body") }
+section body { id24 } with yplane offset -0.62992
+#{ id25 = Id("body") }
+intersect body { id23 } { id24 }
+#{ id26 = Id("body") }
+#{id27 = ( id25 == id26 ) ? id24 : id26}
+brick x 500 y 500 z 500
+#{ id28 = Id("body") }
+section body { id28 } with yplane offset 0.62992 reverse
+#{ id29 = Id("body") }
+intersect body { id27 } { id28 }
+#{ id30 = Id("body") }
+#{id31 = ( id29 == id30 ) ? id28 : id30}
+body { id31 } name "Cell_4"
+group "Material_4" add body { id31 }
diff --git a/test/plots.xml b/test/plots.xml
new file mode 100644
index 0000000..4732ec0
--- /dev/null
+++ b/test/plots.xml
@@ -0,0 +1,13 @@
+
+
+
+ 400 400
+ 0 0 0
+ 6 6
+
+
+ 400 400
+ 0 0 0
+ 8 8
+
+
diff --git a/test/settings.xml b/test/settings.xml
new file mode 100644
index 0000000..ea5f614
--- /dev/null
+++ b/test/settings.xml
@@ -0,0 +1,23 @@
+
+
+ eigenvalue
+ 10000
+ 20
+ 10
+
+ 0.0005
+ std_dev
+
+
+
+ -1 -1 -1 1 1 1
+
+
+ true
+
+
+
+ true
+ 100
+
+
diff --git a/test/tallies.xml b/test/tallies.xml
new file mode 100644
index 0000000..c934516
--- /dev/null
+++ b/test/tallies.xml
@@ -0,0 +1,10 @@
+
+
+
+ 101
+
+
+ 1
+ total
+
+
diff --git a/test/test_examples.py b/test/test_examples.py
index 491b2b2..ed61fa0 100644
--- a/test/test_examples.py
+++ b/test/test_examples.py
@@ -10,33 +10,37 @@
from openmc_cad_adapter import to_cubit_journal
import openmc
+from test import diff_files
+
examples = ["pincell/build_xml.py",
"lattice/hexagonal/build_xml.py",
"assembly/assembly.py"]
+
if 'OPENMC_EXAMPLES_DIR' not in os.environ:
raise EnvironmentError('Variable OPENMC_EXAMPLES_DIR is required')
-OPENMC_EXAMPLES_DIR = Path(os.environ['OPENMC_EXAMPLES_DIR']).resolve()
-
-def diff_files(a, b):
- if not filecmp.cmp(a, b):
- print(''.join(difflib.unified_diff(open(a, 'r').readlines(),
- open(b, 'r').readlines())))
- raise RuntimeError(f'{a} and {b} are different')
+OPENMC_EXAMPLES_DIR = Path(os.environ['OPENMC_EXAMPLES_DIR']).resolve()
def example_name(example):
return '-'.join(example.split('/')[:-1])
+def generate_example_xml(example):
+ if 'assembly' in example:
+ subprocess.Popen(['python', str(OPENMC_EXAMPLES_DIR / example), '--generate']).wait()
+ else:
+ exec(open(OPENMC_EXAMPLES_DIR / example).read())
+
+
@pytest.mark.parametrize("example", examples, ids=example_name)
-def test_examples(example, request):
+def test_examples(example, request, run_in_tmpdir):
openmc.reset_auto_ids()
- exec(open(OPENMC_EXAMPLES_DIR / example).read())
+ generate_example_xml(example)
openmc.reset_auto_ids()
model = openmc.Model.from_xml()
@@ -49,7 +53,7 @@ def test_examples(example, request):
diff_files(output, gold_file)
-def test_cell_by_cell_conversion(request):
+def test_cell_by_cell_conversion(request, run_in_tmpdir):
openmc.reset_auto_ids()
exec(open(OPENMC_EXAMPLES_DIR / "pincell/build_xml.py").read())
@@ -67,12 +71,12 @@ def test_cell_by_cell_conversion(request):
gold_file = request.path.parent / Path('gold') / Path(output)
diff_files(output, gold_file)
+
@pytest.mark.parametrize("example", examples, ids=example_name)
-def test_examples_cli(example, request):
+def test_examples_cli(example, request, run_in_tmpdir):
openmc.reset_auto_ids()
- example_path = OPENMC_EXAMPLES_DIR / example
- exec(open(example_path).read())
+ generate_example_xml(example)
openmc.reset_auto_ids()
world = [500, 500, 500]
@@ -84,4 +88,4 @@ def test_examples_cli(example, request):
raise RuntimeError(f'Command {" ".join(cmd)} failed')
gold_file = request.path.parent / Path('gold') / Path(output)
- diff_files(output, gold_file)
+ diff_files(output, gold_file)
\ No newline at end of file
diff --git a/test/test_local.py b/test/test_local.py
new file mode 100644
index 0000000..22a1e19
--- /dev/null
+++ b/test/test_local.py
@@ -0,0 +1,87 @@
+import openmc
+import pytest
+
+from openmc_cad_adapter import to_cubit_journal
+
+from .test_utilities import diff_gold_file
+from test import run_in_tmpdir
+
+
+# Test the XCylinder and YCylinder classes, the ZCylinder surface is tested
+# extensively in the OpenMC example tests
+
+def test_xcylinder(request, run_in_tmpdir):
+ x_cyl = openmc.XCylinder(r=1.0, y0=10.0, z0=5.0)
+ g = openmc.Geometry([openmc.Cell(region=-x_cyl)])
+ to_cubit_journal(g, world=(500, 500, 500), filename='xcylinder.jou')
+ diff_gold_file('xcylinder.jou')
+
+
+def test_ycylinder(request, run_in_tmpdir):
+ y_cyl = openmc.YCylinder(r=1.0, x0=10.0, z0=5.0)
+ g = openmc.Geometry([openmc.Cell(region=-y_cyl)])
+ to_cubit_journal(g, world=(500, 500, 500), filename='ycylinder.jou')
+ diff_gold_file('ycylinder.jou')
+
+
+def test_cylinder(request, run_in_tmpdir):
+ cyl = openmc.Cylinder(x0=0.0, y0=0.0, z0=0.0, r=6.0, dx=0.7071, dy=0.7071, dz=0.0)
+ g = openmc.Geometry([openmc.Cell(region=-cyl)])
+ to_cubit_journal(g, world=(500, 500, 500), filename='cylinder.jou')
+ diff_gold_file('cylinder.jou')
+
+
+def test_x_cone(request, run_in_tmpdir):
+ x_cone = openmc.XCone(x0=30.0, y0=3.0, z0=5.0, r2=5.0)
+ g = openmc.Geometry([openmc.Cell(region=-x_cone)])
+ to_cubit_journal(g, world=(500, 500, 500), filename='x_cone.jou')
+ diff_gold_file('x_cone.jou')
+
+
+def test_y_cone(request, run_in_tmpdir):
+ y_cone = openmc.YCone(x0=40.0, y0=20.0, z0=7.0, r2=2.0)
+ g = openmc.Geometry([openmc.Cell(region=-y_cone)])
+ to_cubit_journal(g, world=(500, 500, 500), filename='y_cone.jou')
+ diff_gold_file('y_cone.jou')
+
+
+def test_z_cone(request, run_in_tmpdir):
+ z_cone = openmc.ZCone(x0=50.0, y0=10.0, z0=2.0, r2=1.0)
+ g = openmc.Geometry([openmc.Cell(region=-z_cone)])
+ to_cubit_journal(g, world=(500, 500, 500), filename='z_cone.jou')
+ diff_gold_file('z_cone.jou')
+
+
+def test_x_torus(request, run_in_tmpdir):
+ x_torus = openmc.XTorus(x0=10.0, y0=10.0, z0=10.0, a=5.0, b=2.0, c=2.0)
+ g = openmc.Geometry([openmc.Cell(region=-x_torus)])
+ to_cubit_journal(g, world=(500, 500, 500), filename='x_torus.jou')
+ diff_gold_file('x_torus.jou')
+
+
+def test_y_torus(request, run_in_tmpdir):
+ y_torus = openmc.YTorus(x0=-10.0, y0=-10.0, z0=-10.0, a=5.0, b=2.0, c=2.0)
+ g = openmc.Geometry([openmc.Cell(region=-y_torus)])
+ to_cubit_journal(g, world=(500, 500, 500), filename='y_torus.jou')
+ diff_gold_file('y_torus.jou')
+
+
+def test_z_torus(request, run_in_tmpdir):
+ z_torus = openmc.ZTorus(x0=50.0, y0=50.0, z0=50.0, a=5.0, b=2.0, c=2.0)
+ g = openmc.Geometry([openmc.Cell(region=-z_torus)])
+ to_cubit_journal(g, world=(500, 500, 500), filename='z_torus.jou')
+ diff_gold_file('z_torus.jou')
+
+
+def test_torus_diff_radii(request, run_in_tmpdir):
+ with pytest.raises(ValueError):
+ z_torus = openmc.ZTorus(x0=50.0, y0=50.0, z0=50.0, a=5.0, b=2.0, c=3.0)
+ g = openmc.Geometry([openmc.Cell(region=-z_torus)])
+ to_cubit_journal(g, world=(500, 500, 500), filename='a_torus.jou')
+
+
+def test_general_cone(request, run_in_tmpdir):
+ with pytest.raises(NotImplementedError):
+ cone = openmc.Cone(x0=0.0, y0=0.0, z0=0.0, r2=6.0, dx=1, dy=1, dz=1)
+ g = openmc.Geometry([openmc.Cell(region=-cone)])
+ to_cubit_journal(g, world=(500, 500, 500), filename='cone.jou')
\ No newline at end of file
diff --git a/test/test_utilities.py b/test/test_utilities.py
new file mode 100644
index 0000000..9f6ac2e
--- /dev/null
+++ b/test/test_utilities.py
@@ -0,0 +1,26 @@
+import os
+import shutil
+import difflib
+import filecmp
+
+from test import test_config
+
+def diff_files(test_output, gold_file):
+
+ if test_config['update']:
+ os.makedirs(os.path.dirname(gold_file), exist_ok=True)
+ shutil.copy(test_output, gold_file)
+
+ if not filecmp.cmp(test_output, gold_file):
+ print(''.join(difflib.unified_diff(open(test_output, 'r').readlines(),
+ open(gold_file, 'r').readlines())))
+ raise RuntimeError(f'{test_output} and {gold_file} are different')
+
+
+def diff_gold_file(gold_file, request=None):
+ if request is not None:
+ gold_file = request.path.parent / gold_file
+ b = request.path.parent / 'gold' / gold_file.name
+ else:
+ b = os.path.join(os.path.dirname(__file__), 'gold', os.path.basename(gold_file))
+ diff_files(gold_file, b)
\ No newline at end of file
diff --git a/test/xcylinder.jou b/test/xcylinder.jou
new file mode 100644
index 0000000..2f4cf29
--- /dev/null
+++ b/test/xcylinder.jou
@@ -0,0 +1,8 @@
+set graphics off
+set journal off
+#CELL 1
+cylinder height 500 radius 1.0
+#{ id1 = Id("body") }
+rotate body { id1 } about y angle 90
+body { id1 } move 0 10.0 5.0
+body { id1 } name "Cell_1"
diff --git a/test/ycylinder.jou b/test/ycylinder.jou
new file mode 100644
index 0000000..c72b62a
--- /dev/null
+++ b/test/ycylinder.jou
@@ -0,0 +1,8 @@
+set graphics off
+set journal off
+#CELL 2
+cylinder height 500 radius 1.0
+#{ id1 = Id("body") }
+rotate body { id1 } about x angle 90
+body { id1 } move 10.0 0 5.0
+body { id1 } name "Cell_2"