Test tutorials #462
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: "Test tutorials" | |
| on: | |
| push: | |
| branches: | |
| - "master" | |
| pull_request: | |
| branches: | |
| - "master" | |
| schedule: | |
| - cron: "0 0 * * 0" # Every Sunday at midnight | |
| jobs: | |
| tutorial-1: | |
| runs-on: "ubuntu-latest" | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: "Check out" | |
| uses: actions/checkout@v2 | |
| - name: "Install dependencies with Mamba" | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: test | |
| environment-file: devtools/conda-envs/test-tutorials.yml | |
| miniforge-variant: Mambaforge | |
| python-version: 3.7 # Mimics Google Colab | |
| - name: "List conda packages" | |
| run: conda list | |
| - name: "Convert the tutorial" | |
| run: | | |
| jupyter nbconvert --to python --stdout tutorials/openmm-torch-nnpops.ipynb > test.py | |
| sed -i '/condacolab/d' test.py # Remove conda-colab | |
| sed -i 's#&> /dev/null##g' test.py # Remove the output redirection | |
| cat test.py | |
| - name: "Run the tutorial" | |
| run: ipython test.py |