From 058ebf03ad5612f5b677fe038c7d038aeaae2b18 Mon Sep 17 00:00:00 2001
From: Luke Zappia <lazappi@users.noreply.github.com>
Date: Thu, 16 Jan 2025 07:45:12 +0100
Subject: [PATCH] Bump scIB to v1.1.7 (#30)

---
 src/data_processors/process_dataset/config.vsh.yaml | 2 +-
 src/metrics/asw_batch/config.vsh.yaml               | 2 +-
 src/metrics/asw_label/config.vsh.yaml               | 2 +-
 src/metrics/clustering_overlap/config.vsh.yaml      | 2 +-
 src/metrics/graph_connectivity/config.vsh.yaml      | 2 +-
 src/metrics/hvg_overlap/config.vsh.yaml             | 2 +-
 src/metrics/isolated_label_asw/config.vsh.yaml      | 2 +-
 src/metrics/isolated_label_f1/config.vsh.yaml       | 2 +-
 src/metrics/kbet/config.vsh.yaml                    | 2 +-
 src/metrics/pcr/config.vsh.yaml                     | 2 +-
 10 files changed, 10 insertions(+), 10 deletions(-)

diff --git a/src/data_processors/process_dataset/config.vsh.yaml b/src/data_processors/process_dataset/config.vsh.yaml
index 6ce90edd..531ea2e3 100644
--- a/src/data_processors/process_dataset/config.vsh.yaml
+++ b/src/data_processors/process_dataset/config.vsh.yaml
@@ -11,7 +11,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.5
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow
diff --git a/src/metrics/asw_batch/config.vsh.yaml b/src/metrics/asw_batch/config.vsh.yaml
index c5042e9f..e732295c 100644
--- a/src/metrics/asw_batch/config.vsh.yaml
+++ b/src/metrics/asw_batch/config.vsh.yaml
@@ -45,7 +45,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.5
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow
diff --git a/src/metrics/asw_label/config.vsh.yaml b/src/metrics/asw_label/config.vsh.yaml
index faeb776e..85835857 100644
--- a/src/metrics/asw_label/config.vsh.yaml
+++ b/src/metrics/asw_label/config.vsh.yaml
@@ -33,7 +33,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.5
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow
diff --git a/src/metrics/clustering_overlap/config.vsh.yaml b/src/metrics/clustering_overlap/config.vsh.yaml
index 11b0cbd8..0b2322eb 100644
--- a/src/metrics/clustering_overlap/config.vsh.yaml
+++ b/src/metrics/clustering_overlap/config.vsh.yaml
@@ -65,7 +65,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.6
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow
diff --git a/src/metrics/graph_connectivity/config.vsh.yaml b/src/metrics/graph_connectivity/config.vsh.yaml
index a15bfc72..a7178b37 100644
--- a/src/metrics/graph_connectivity/config.vsh.yaml
+++ b/src/metrics/graph_connectivity/config.vsh.yaml
@@ -42,7 +42,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.5
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow
diff --git a/src/metrics/hvg_overlap/config.vsh.yaml b/src/metrics/hvg_overlap/config.vsh.yaml
index fd52ebed..f06740f7 100644
--- a/src/metrics/hvg_overlap/config.vsh.yaml
+++ b/src/metrics/hvg_overlap/config.vsh.yaml
@@ -41,7 +41,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.5
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow
diff --git a/src/metrics/isolated_label_asw/config.vsh.yaml b/src/metrics/isolated_label_asw/config.vsh.yaml
index 7a306f46..23b3816b 100644
--- a/src/metrics/isolated_label_asw/config.vsh.yaml
+++ b/src/metrics/isolated_label_asw/config.vsh.yaml
@@ -34,7 +34,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.5
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow
diff --git a/src/metrics/isolated_label_f1/config.vsh.yaml b/src/metrics/isolated_label_f1/config.vsh.yaml
index f4241f8f..ffb0f8e3 100644
--- a/src/metrics/isolated_label_f1/config.vsh.yaml
+++ b/src/metrics/isolated_label_f1/config.vsh.yaml
@@ -53,7 +53,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.6
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow
diff --git a/src/metrics/kbet/config.vsh.yaml b/src/metrics/kbet/config.vsh.yaml
index 428571cf..bbbc6124 100644
--- a/src/metrics/kbet/config.vsh.yaml
+++ b/src/metrics/kbet/config.vsh.yaml
@@ -50,7 +50,7 @@ engines:
         github: theislab/kBET
       - type: python
         pypi:
-          - scib==1.1.6
+          - scib==1.1.7
           - rpy2>=3
           - anndata2ri
           - scipy<=1.13
diff --git a/src/metrics/pcr/config.vsh.yaml b/src/metrics/pcr/config.vsh.yaml
index 3075f911..980fcd3a 100644
--- a/src/metrics/pcr/config.vsh.yaml
+++ b/src/metrics/pcr/config.vsh.yaml
@@ -39,7 +39,7 @@ engines:
     setup:
       - type: python
         pypi:
-          - scib==1.1.5
+          - scib==1.1.7
 runners:
   - type: executable
   - type: nextflow